lowQualScore : 1 22222 444444 1 44444444444444 22222222222 1 4444444444 111 55555555555555555 22 11 6666666666666666666666666666666666666666 2 44444444444444444444444 1111 4444444444 3 44444444444444444 222 777777777777777777 333 1111111111111 22 1111 1 44444444444444444444444444444444444444444444 1 444 22222 4444 2 2222 1 22 1 2 1111 11 1 2 1111 11 11 4444444444444 2 444444444444444 1111 44444444444444444444444 1111 55555555555555555555555555555555555555555 111 22 55555555555555555 1111 4444444444 1 22222222222 44444444444444 1 444444 22222 1 555 4
lowQualScore : 5 4 8 00000 3 55 2 3 000000 1 8 1 2 6 1 33 88888888888888 99999999 11111111111 666 2 3 5555555555 2 111 5 88888888888888888 66 88 2 4 2222222222222222222222222222222222222222 2 44 3 666666 2 11111111111111111111111 9999 1 88 8888888888 1 3 444 88888888888888888 222 444444444444444444 0 88 7 444 9999999999999 2 2 777777 3 444 11 9 2 8888 2 6 7 33 66666666666666666666666666666666666666666666 44 66 1 000 555 77 33 88888 5 8 3333 0 9 33 9999 3 4 0 6 0 7 0 0 44 6 6666 88 4 2 88 0 1 5555 33 2 8888 4 4 4 2 3 0000 777 66 22 77 8 2 6666666666666 6 444 3 1 6 666666666666666 0 8888 11111111111111111111111 2 666666 8888 2 66666666666666666666666666666666666666666 4 2 999 66 88888888888888888 7777 2 4444444444 3 2 666 00000000000 99999999 88888888888888 33 1 6 2 1 6666 000000 3 2 55 3 00000 8 4 5 777 0 6 6
lowQualScore : . . . ..... . .. . . ...... . . . . . . .. .............. ........ ........... ... . . .......... . ... . ................. .. .. . . ........................................ . .. . ...... . ....................... .... . .. .......... . . ... ................. ... .................. . .. . ... ............. . . ...... . ... .. . . .... . . . .. ............................................ .. .. . ... ... .. .. ..... . . .... . . .. .... . . . . . . . . .. . .... .. . . .. . . .... .. . .... . . . . . .... ... .. .. .. . . ............. . ... . . . ............... . .... ....................... . ...... .... . ......................................... . . ... .. ................. .... . .......... . . ... ........... ........ .............. .. . . . . .... ...... . . .. . ..... . . . ... . . .
lowQualScore : 0 6 8 55555 6 00 1 3 666666 0 6 1 3 6 3 44 88888888888888 11111111 99999999999 111 7 3 9999999999 7 777 3 55555555555555555 55 33 9 8 8888888888888888888888888888888888888888 2 11 7 444444 2 00000000000000000000000 8888 9 22 1111111111 3 1 111 55555555555555555 111 666666666666666666 8 77 5 999 4444444444444 0 7 777777 4 777 11 3 7 3333 9 5 4 99 77777777777777777777777777777777777777777777 66 88 4 666 000 88 99 44444 8 9 5555 8 8 66 0000 7 8 8 0 5 7 4 7 22 2 5555 99 2 1 22 0 0 1111 99 8 9999 4 4 0 6 9 7777 888 11 22 88 3 7 9999999999999 4 111 1 2 6 111111111111111 4 2222 00000000000000000000000 2 444444 8888 2 22222222222222222222222222222222222222222 8 9 888 55 66666666666666666 0000 7 3333333333 3 7 111 33333333333 11111111 88888888888888 44 3 9 3 1 4444 666666 3 1 00 6 55555 8 6 0 555 0 0 0
consensus : NTTTGNCTAAGTTCCGAATAGG----GTATTTTT-AGA--CNGGAATATTAT--CT-NCTACGTTTACGT-GTTTGAAACCA--TTTT---TCCCA-ATA-CCAA--------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTTTTTAAATA-TCTCACAAAAT-ANT-TTT-CG--TANT----AA--GTCACCAT-CTAGTNTTT-CTATGACGAC--GAAAA---AGACGCCT-ATTTTGGTG-GCCTT-ACAATCGATTTTACCA-G-TT-CCGAA------TAG-CCCC----------------------TATTCA---CAGGGGTAGAAAATGCAATCTA-AA-GAAGAATAAAA-TTTGGA---TTGAAATAAAAGNT-TAGAAAT-TTGATCTTTC--ATCTG-A-GA-TCATG--C-G-CATAA-TTTANGTA-GATCT-NCAAA-------ACCA-TTCAT------ACTT---TTATTCACG-TCTTGAAAA---TG-AGGGGGCTTTCCGA--TTTT-----T--T-----CA--NANAA-CAAA-----CA---T-G--CGG-ATTTT--CGGGAAA---TT---GAG-CA--CT-CGCTCTTTTTAAGGAACTA-C-AAAATTCAT-GCG-CTCAGTAAATTACGGAAAATTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCG--TNATG----TTTT-TATTTAATAATTTCGGCACGAGAAGATA---AAGGTTTTCAACT--CA-TCAGAC-TTAAATNATTCTGAA---NTG---G--A--ATTATGCNTGATTCTNCAGATGAAAGATCAA-ATTTCTA-ANCTTTTATTTCAA---TCCAAA-TTTTATTCTTC-TT-TAGATTGCATTTTCTACCCCTG---TGAATA----------------------GGGG-CTA------TTCGGAAA-C-TGGTAAAATCGATTGT-AAGGC-CACCAAAATAGGGCGTCT---TTTTC--GTCGTCATAG-AAANACTAGAATGGTGACC-TT----ANTA--CG-AAAAN-T-ATTTTGTGAGA-TATTTAAAAAAG-T-AAA-AAG-TTCA--AAT-TA---A-T-TG--------TTGG-TAT-TGGGA---AAAA--TGGTTTCAAAC-ACGTAAACGTAGN-AG--ATAATATTCCNG--TCT-AAAAATAC----CCTATTCGGAACTTAGNCAAA--NGACTGTAC-TTTGAAT
Reference ( gi|1 ) : TTTTGGCTAAGTTCCGAATAGG----TTATTTTT-AGA--CTGGAATATCAT--CT-TCTACGTTTACGT-GTTTGAAATCA--TTTT---TCCCA-ATT-CCAA--------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTTTTTAAATA-TCTCACAAAAT-GTT-CTT-TG--TACT----AA--GTCACCATTCTAGAGTTT-CTATGATGACCGAAAAA---AGACGCCCCATTTTGGTGAGCCTT-GCCATCGATTTTACCA-G-TTTCCGAA------TAG-CCCA----------------------TATTCA---AAGGGGTAGAAAATGCAATCTA-AAAGAAGAATAAAAATTTGAA---TTGAAATAAAAAATATAGAGAC-TTGATCTTTC--CTCTG-A-GA-CCATC--C---CATAG-TTTATGTA-G-TCT-ATAGA-------ACCA-TTCAT------ACTT---TTCTTCACG-TCTTGAAAT---TG-AGGAGTCTTTCCGA--TTTT-----T--T-----CA--AATAA-CAAA-----CA---T-G--CGG-ATTTT--CGGCAAAAT-TT---AAA-CA--CT-CGTTCTTTTTAAGGAGCTATCAAAAATTCATCGCG-CTCAGTAAATAACAAAAAATTGAAGAATTATTTAGCAGATGAAAGATTAAAGTTTATTATCA--TAATG----TTTTATATTCAATAATTTTGCCACGAAAAGATA---AAAGTTTTTAACT--CA-TTAAAC-TT-AATTATTCGGAA---CTG---G--A--ACTATGGATGGTTCTTCAGATGAAAGATCAA-GTCTCTATATTTTTTATTTCAA---TTCAAATTTTTATTCTTCTTT-TAGATTGCATTTTCTACCCCTT---TGAATA----------------------TGGG-CTA------TTCGGAAA-C-TGGTAAAATCGATGGC-AAGGCTCACCAAAATGGGGCGTCT---TTTTTCGGTCATCATAG-AAACTCTAGAATGGTGAC--TT----AGTA--CA-AAGAA-C-ATTTTGTGAGA-TATTTAAAAAAG-T-AAA-AAG-TTCA--AAT-TA---A-T-TG--------TTGG-AAT-TGGGA---AAAA--TGATTTCAAAC-ACGTAAACGTAGA-AG--ATGATATTCCAG--TCT-AAAAATAA----CCTATTCGGAACTTAGCCAAAACGGACTGTACGTTTAAGTATATTTCAAAGAATGAAATTTATTTCTGAAA
gi|6 : TTTGCCTA-GTTCCGAATAGG----GTATTTTTTAGA--CTGGGATAT-AT-----TCTACATA-ACAT-GTTTGAAACCA--TTTT-----CCA---T-ACAAAAAAAAAACA-AATGAATA-ATT--TGAATCTTGTTT-AACTTT---AAATAGTATCACAAATA-GTT-CT---G--TAA-----AA--ATCACCATGCTAGTTTTTTCTAAGATGGC--GAAAA---AGACACT--ATTTTGGCT-GCCTT-GCAA-CGATTTTACCA-G-TT-CCGAT------CAG-CCCCC---------------------TGTTCA---CAGG---AGAAAATGCA-TCTA-AAA----AGTATAAATTTGGA---TTGAAAATAATAAT-TAGAAAT-TTGATCTTTC--ATCTG-AAGA-ATATG--C----ATAA-TTTATGTG-GATCT-ATAAA-------GACA-TTCAT------ACTT---TG-TTCACGGTCTTGAAAT---TG-AAGGGGCTTTCCGA--TTTT-----T--T-----CAGAAATA--CAAA-----CA---T-G--GCG-TTTTT--CGGCAA----TT---AAG-C---CT-C-CTCTTTTCA-GGAGCTGC--ATAATTC--TGCGTCTCAGTAAATTA-AGAAATTTGAAGAAT-ATT-AACTGACGAA-GATTAAAATTCATTCTCA--CTATG----TTTTATCT--AATAATTTTGCAATGAAAGATTA---AAAGTTTTTAACTACCA-TTAAAC-TT-AA-TATTCGGAA---CTG---G--A--A
gi|19 : gTTTGGCTA-GTTCCGAATAGG----GTGTTTTT-AGA--CTGGGATATCAT--C--TCTATG-TTACAT-GTTTGAAACCA--TTTT---TCC---ATA-GCAA--------CA-A-T---TG-ATT--TGAA-CTT-TTT-A-C---TTTAGATA-TCTCACAAAATAGTT-CTTGTG--GA------AA--GTCACCA-TCTAGTGTTT-Caaacttattccgaac
gi|23 : tacagtcaTCTGGCTA-GTTTCGGATAGGCGCGTTTTTTTT-AGAATCTGGAATATCAT--C---CCACGTTa
gi|29 : atgcagtattgtaatcagTTTGCCTA-GTTCCGAATAGG----GTATTTTctgttccataccaatt
gi|7 : taagcattcaaagtacagtccTTGTCTA-GTTCCGAATAGG----GTATTTTT-AGA--CTGGGATATCAT--CT--CTACGTT-ACGT-GTTTGAAACCA--TTTT---CCC---ATT-TCAA--------CA-A-T---TA-ATT--TGAA-CAT-TTT-A-CTTT---AAATA-TCTCACAAAATAGTT-CTT--G--TA-T----AA--GTCACCAT-CTAGAGTTT-CTATGGCGAC--GAAAA---AGATGCTC-ATTTCTGTG--CTTT-GC-ATCGATTTTACCA-G-TA-CCGAA------TAG-TCCC----------------------TATTCA---CTGGGGTAGAAAATGCA-TCTA-AA-GAAGAATAAAA-TTTGAA---TTGAAATAAAAGTT-TAGAAAT-TCGATCTTTC--ATCTG-AAGA---ATC--GTG-CATAA-TTTATGTA-GATCT-ATAGA-------ACCA-TTCAT------ACTT---T-CTTCACG-TCTTGAAAA---CG-AGGAGTCTTTCCGA--TTTT-----T--T-----CT--TAAAA-TAAA-----CA---T-GG-CGG-ATTTT--CGGCAAA---TT---AAG-CA--CT-CCCTCTTTTTAAGGAGCTATTAAAA-TTCA-AGCG-CTCAGTAAATAACGAAAA-TTGAAGAATTATTCAACAGATGAAGGATTAAAGTTTATT---A--TAATG----TTT--TATTTAATAATTTCG-CACCAAAAAAT----AAAGTTTTC-ACT--CA-TTAAAC-TTAAATTATTCGGAA---CTG---GAAA--ACTATatctctactttaca
gi|8 : CTAGCTCCCGAATAGG----GTATTTTC-AGA--CAGGATTATTAC--CGAGCTACGTTC-TGT-GTTGGAAACCA--TTTT---TCC---ATA-CCAA--------CA-A-A---AT-ATT--TCAA-CTT-TTT----TTCTTTAAATA-TCTCACGAAAT-AAT-TTT-CG--CAA-----AG--GTCAACA-CCTAGTCTTT-CTATGACGAC--AAAAA---A---GCCCC------GTGA--CGT-GCAA-CAATTTC-CCA-G--TTCTGGA------CAT-CCTC----------------------TATTCA---CAGGCGTAGAAAATG-ACTC-A-AAATGAGAAT-AAACTTTGTA----TGAAAT-AAAAGTTTTGAGAT-TTGATCTTTC--ATCTGAA-GA---ATCAAG---CATAA-TTTAGGTATA-TCT-TCAAA-------ACAG-TTCAT------AC-T---TTATTTACG-TCTCGAAAA---TG-AGGTGGCTTCCTTA--TTTTA----TAAT-----CA--GAAAA-CAAG-----CC---T-GGCCGG--TTTT--TGG---AATATT---AAG-CA--AT-CCATCTTTTCAAAGAGCTG-AAAAAATTCAT-GCT-CTGAGTAAATTAT-GAAAATTGTAGAATTATTTAACAGATA--------------ATCATAA--TAATA----TTT--TACTTAA----TTCG-TACGAAAAGAT----AAAGTTTTC-ACT--CATTTAAACTTT-AATTATTCGGAA---TTG---G--A--Atcggaactaggcaa
gi|2 : tttccAAGTTCCGA-TATG----GTATTTTT-AGG--CGGGAATATTATATCT-ATTATCTCTACATTATCT---ATTACCTTTT---TCACA-----TCAA--------TA-A-TA--TATAGT--TAAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAAT-AAT-TTT-------CT----AAAGGTCAACAT-CTAGTTTTT-CTATAACGAC--GAAAA---AGAGGCCT-ATTTTG-TG--TCTT-ACAA-CGATTTTACCA-G-TT-CCAAA------CAA-CCTT----------------------TATTCA---CAAGGGTGGAATATGCA-TTT-----GAAGAATAAAA-TTTGGA---TTGAAATAAAAGCT-TAGAAAT-GTGATCGTTCATCTTTA-A-AA-TCAAG--CGG-CATAA-TTTAAGTA-GATCT-TCAAG-------ATTA-TTCAT------ACTT---TAATT-ACG-ACTTGAAAA---TG-AGGGGGCTTTTCGA--TTTT-----T--TTTCTTCAG-AATACTCAAAATTCACA---TTG--TGG-ATTTT--CGGGAAA---TT---GAG-CA--TT-AGCCCTTTT-AAGGAACTA------ATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAGAATTGTTTAAAAGATGAAGGATTAGAGTTTATTATTG--TCATG----TTT--TATTTGATA---TTGGCACGGGAAGATA---AAG--TTTTAAAG--CA-TCAGAC-TTAAATAATTCTGAA---ATG---G--AAGACTATaacaattcggaacaaagaa
gi|3 : ttttcAAGTTCCGA-TATG----GTATTTTT-AGG--CGGGAATATTATATCT-ATTATCTCTACATTATCT---ATTA--CCTT---TTTCACATA-TCAA--------TATA-TA--TA-GTT---AAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAAT-AAT-TTT-------CT----AAAGGTCAACAT-CTAGTTTTT-CTATAACGAC--GAAAA---AGAGGCCT-ATTTTG-TG--TCTT-ACAA-CGATTTTACCA-G-TT-CCAAA------CAA-CCTT----------------------TATTCA---CAAGGGTGGAAT-TGCA-TTT-----GAAGAATAAAA-TTTGGA---TTGAAATAAAAGCT-TAGAAAT-GTGATCGTTCATCTTTA-A-AA-TCAAG--CGG-CA-AA-TTTAAGTA-GATCT-TCAAG-------ATTA-TTCAT------ACTT---TAATT-ACG-ACTTGAAAA---TG-AGGGG-CTTTTCGA--TTTT-----T--TTTCTTCAG-AATACTCAAATTCA-CA---TTG--TGG-ATTTTTTCGGGAAA---TT---GAG-CA--TT-AGCCCTTTT-AAGGAACTA------ATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAAGATTGTTTAAAAGATGAAGGATTAGAGTTTATTATTG--TCATG----TTTTAT-TT--GTA---TTGGCACGGGAAGATA---AAG--TTTTAAAG--CA-TCAGAC-TTAAATAATTCTGAA---ATG---G--AAGACTATtctaaactagaaaaactactgta
gi|5 : tcAAGTTCCGA-TATG----GTATTTTT-AGG--CGGGAATATTATATCT-ATTATCTCTACATTATCT---ATTA--CCTT---TTTCACATA-TCAA--------TATA-TA--TA-GTT---AAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAAT-AAT-TTT-------CT----AAAGGTCAACAT-CTAGTTTTT-CTATAACGAC--GAAAA---AGAGGCCT-ATTTTG-TG--TCTT-ACAA-CGATTTTACCA-G-TT-CCAAA------CAA-CCTT----------------------TATTCA---CAAGGGTGGAAT-TGCA-TTT-----GAAGAATAAAA-TTTGGA---TTGAAATAAAAGCT-TAGAAAT-GTGATCGTTCATCTTTA-A-AA-TCAAG--CGG-CA-AA-TTTAAGTA-GATCT-TCAAG-------ATTA-TTCAT------ACTT---TAATT-ACG-ACTTGAAAA---TG-AGGGGGCTTTTCGA--TTTTTTTTCT--T-----CAG-AATACTCAAATT---CACATT-G--TGGTTTTTT--CGGGAAA---TT---GAG-CA--TT-AG-CCCTTTTAAGGAACT------AATTCAT-GCA-CTCAGTAAATTAT-GAAAATTGTAAGATTG-TTAAAAGATGAAGGATTAGAGTTTATTATTG--TCATG----TTTTAT-TT--GTA---TTGGCACGGGAAGATA---AAG--TTTTAAAG--CA-TCAGAC-TTAAATAATTCTGAA---ATG---G--AAGACTATtctaaactagaaaaactac
gi|4 : tcAAGTTCCGA-TATG----GTATTTTT-AGG--CGGGAATATTATATCT-ATTATCTCTACATTATCT---ATTA--CCTT---TTTCACATA-TCAA--------TATA-TA--TA-GTT---AAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAAT-AAT-TTT-------CT----AAAGGTCAACAT-CTAGTTTTT-CTATAACGAC--GAAAA---AGAGGCCT-ATTTTG-TG--TCTT-ACAA-CGATTTTACCA-G-TT-CCAAA------CAA-CCTT----------------------TATTCA---CAAGGGTGGAAT-TGCA-TTT-----GAAGAATAAAA-TTTGGA---TTGAAATAAAAGGCTTAGAAAT-GTGATCGTTCATCTTTA-A-AA-TCAAG--CGG-CA-AA-TTTAAGTA-GATCT-TCAAG-------ATTA-TTCAT------ACTT---TAATT-ACG-ACTTGAAAA---TG-AGGGGGCTTTTCGA--TTTT-----T--TTTCTTCAG-AATACTCAAATTCA-CA---TTG--TGG-TTTTTT-CGGGAAA---TT---GAG-CA--TT-AGCCCTTTT-AAGGAACTA------ATTCAT-GCA-CTCAGTAAATTATGAAA--TTGTAAGATTGTT-AAAAGATGAAGGATTAGAGTTTATTATTG--TCATG----TTTTAT-TT--GTA---TTGGCACGGGAAGATA---AAG--TTTTAAAG--CA-TCAGAC-TTAAATAATTCTGAA---ATG---G--AAGACTATtctaaactagaaaaactac
gi|16 : tcAGTTCCGAATAGG----GTATTTTT-AGA--CTGGGGTATCAT--C--TCTACG-TTACAT-GTTTGAAACCA--TTTG---TCC---ATA-CCAA--------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-C---TTTAAGTA-TGTCACAAACT-AGT-TTT-TGAAAATTTTAAAA--GTCGCCA-TCTAGTGTTT-CTATGACGAC--AAATA---AGACA-CCTATTTTCGT--GCCTT-A-CATCGAGTTTACCA-G--TTCCGAA------TAG-CTCtctaaactagaaaaactac
gi|18 : acctTATTTTG-GGA--TTGATATATTAT--CT--CTACATT-ACGT-GTTTGAAACCA--TTTT---CCC---ATA-CCAA--------CA-A-C--------------A-CAT-TTT------------------TCACAAAAT-GTT-TT--------CA----AAG-GTCACCATT-TA----CT-TTATGACAA-CGATAAATTCA-----CCTATTTT--TGCGGCTT-ACAA-CGA-TTTACCA-G--TTCCGAA------AAGACCCT----------------------TAt
gi|12 : agtcgatatgtacatggTACGTT-ACGT-ATTTAAAACCA--TTTTGTATACCA------CAA--------TA-G-T---AA-ATTATTAAA-CAT-TT--A-CTTT---AAATA-TCTTACAAAAT-AAT-TTT-TG--CA
gi|27 : tTTACAC-GTTTGAAACCA--TTTT---CCC---ATA-CCAA--------CA-A-T---aaggccgccttttttgtgctttacaacgatttccccagttcgattaacctctactcacaggggtagaaaatgcatctaaaggagaatgaactttggattgaaaaaaaattgatctttcatctgaagaatcaagcataatctgggtagatcttcagaacaattcatactttatttacgtttgaaaaataaggtgctgctcgatttatagtgacgaattccggaaaattaagcactcatcttttcaggataacaaacttctgcgctcaataaattatgacaataacttattcaatagatgttcatagtatcaagtaaggagtcttttttatgcagaaatcttgcaacaagga
gi|28 : ACAT-GTTTAAAATCT--TTTT---TTTAA-A----CAG--------CA-A-T---AA-ATT--TGAA-CTT-TTTGA-----TTTAAATA-TATAACAAAAT-ATT-TTT-atacccttagatcttgaaaatagtatttgaactagaaaat
gi|11 : GATACCA--TTTT---ACC---ATA-CCAA--------CA---T---TA--TT--TGAA-CTT-TTT-A----TTTTAAATA-TCTCAAGAAATAGTT-CTT-CG--TAA-----AA--GTCACGAT-CTAATGTTT-CTAGGACGAC-GTTAAA---AGACATCT-ATATT--TGAGCCTTAG--ATCAATTGTACCA-G-TT-CCGAA------TAT-CCCC----------------------TAATCC---TAGAGTTA-------TAAT-------GAAGAATAAAA-TTAGGA---TTGAAAT------------GGC----ATCTTTC--ATCTGCA-GAATCATG--C----ATAA-TTTATGCA-AATCT--TAAA-------ACCA-TTCAT------A------TTATTCAGA-TCT-GAAAA---TG-AGGGGACTTTCCGA--CTTT-----T--T-----CA--TAAAA-CAAG-----TA---T-GA-TGG-ATTTT--CGGCAAA---TT---GAG-CA--CTACAT-CTTTTTAAGGA---AACAAAA-CTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAACACGTGGAGAATTAAAGTTTATTATCA--TGGCG----TTT--TATTTAATAATTTCG
gi|9 : ACCA--TTTT---AAC---ATTACCAA--------CA---T---TA--TT--TGAA-CTT-TTT-A-----TTTAAATA-TCTCAAGAAAT-ATTTCTT-CG--TAA-----AA--GTCACGAT-CTAATGTT--CTAGGACGAC-GTTAAA---AGACATCT-ATAT--ATGAGCCTT-AGATTCAATTGTACCA-G-TT-CCGAA------TAT-CCCC----------------------TAATCC---TAGAGTTA-------TAAT-------GAAGAATAAAA-TTAGGA---TTGAAAT------------GGC----ATCTTTC--ATCTGCA-GAATCATG--C----ATAA-TTTATGCA-AATCTTATA-A-------ACCA-TTCAT------ATTA---TTAT-CAGA-TCTTGAAAA---TG-AGGGGACTTTCCGA--CTTT-----T--T-----CA--TA-AA-CAAG-----TA---T-GA-TGG-ATTTT--CGGCAAA---TT---GAG-CA--CTACA-TCTTTTTAAGGAACTAAC-AAAACTCAT-GCA-CTCAGTAAAATAC-GAAAATCGAAGAATTATGTAAC-GGTGAGAAATTAAAGTTTATTATCA--TGGCG----TTT--TATTTAATAATTTCG
gi|10 : atACCA--TTTT---AAC---ATTACCAA--------CA---T---TA--TT--TGAA-CTT-TTT-A-----TTTAAATA-TCTCAAGAAAT-ATTTCTT-CG--TAA-----AA--GTCACGAT-CTAATGTT--CTAGGACGAC-GTTAAA---AGACATCT-ATAT--ATGAGCCTT-AGATTCAATTGTACCA-G-TT-CCGAA------TAT-CCCC----------------------TAATCC---TAGAGTTA-------TAAT-------GAAGAATAAAA-TTAGGA---TTGAAAT------------GGC----ATCTTTC--ATCTGCA-GAATCATG--C----ATAA-TTTATGCA-AATCTTATA-A-------ACCA-TTCAT------ATTA---TTAT-CAGA-TCTTGAAAA---TG-AGGGGACTTTCCGA--CTTT-----T--T-----CA--TA-AA-CAAG-----TA---T-GA-TGG-ATTTT--CGGCAAA---TT---GAG-CA--CTACA-TCTTTTTAAGGAACTAAC-AAAACTCAT-GCA-CTCAGTAAAATAC-GAAAATCGAAGAATTATGTAAC--GTGAGAAATTAAAGTTTATTATCA--TGGCG----TTT--TATTTAATAATTTCG
gi|25 : atTTT-CTATGACGAC--GAAAA---AGACA-CCTATCTTTGT--GCCTT-A-CGTTGATTTTATCA-G--TTCCGAATACCGGTAG-CCCC----------------------AATTCA---
gi|12 : AAA---GGCCGCCT--TTTTTGTG---CTT-TACAACGATTTCCCCA-G-TT--CGAT------TAA-CCTC----------------------TACTCA---CAGGGGTAGAAAATGC-ATCT--AAAGGAGAAT-GAACTTTGGA---TTGAAA-AAAAA-----------TTGATCTTTC--ATCTGAA-GA---ATCAAG---CATAA-TCTGGGTA-GATCT-TCAGA-------ACAA-TTCAT------AC-T---TTATTTACG-TTTGAAAAA---TA-AGGTG-CTGCTCGA--TTTA-----T------------AGTGA-CGAA---------------------TTC--CGG-AAAA--TT---AAG-CA--CT-CA-TCTTTTC-AGGA--TAAC-AAACTTC--TGCG-CTCAATAAATTAT-GACAAT----AACTTATTCAATAGATG-----TTCA----TAGTATCAAGTAAGGAGTCTTTTTTATGCAGAAATCTTGCAACAAcga
gi|21 : ttacgttacgtatttaaaaccattttgtataccacaatagtaaattattaaacatttactttaaatatcttacaaaataatttttgcGCCTT-AC-ATCGATTTTACCA-G-TT-CCGAA------CAG-CTCC----------------------TATTCA---CAGGGGCAGAAAATGC-ATCTAGAAAGAAG------AATTTCAA---CTGAAAgga
gi|14 : gtGATTTCATCA-A-TTTC-GAA------TAG-CCCACAAATAATCAATCAATCAACCCTATTCACACAGGGGAAAAAAAATGCA-TCTA-AA-GAAGAATGAAA-TTTGGA---TTGAAATAAAAGTT-CAAAAAT-TTGATCTTTC--ATCTG-AAGA---ATC--AAG-CATAAATTTAGGTA-GATTT--------------CTG-TTCAT-------CCT---TTATTTACG-TCTTAAAAA---TGCAGGGG-CTTTCCGATTTTTT-----T--T-----TA--GAAAA-CAAA-----CA---TGG--CGG-ACATT--CAGGAAA---TT---ATG-CA-----------TTTTGAGAAGCT----AACACTCATCaatcatgcataattttagatatgtagatcta
gi|17 : gtgctttacaaaATCTTACAATGCTTTCCGAA------TAG-CCTGGTC-------------------TATTCA---------TAGAAAACGCA-TCTA-CA-TAAGAATGGAC-CTTGGA---CTGAAATTAAAGTTTT-GAAAT-TTGATCTTCC--ATCTG-AAGA---ATC--AAG-CATAA-TTTAGGTA-----T-ATAGATCTTCAAAGCAGTTCATTATAGTACTTAATTTAGTAATG-TCTTGAAAaaccttaaatta
gi|22 : CA-G-TT-CCGAA------TAG-CCCC----------------------TATTCA---CAGGGGTACAAACTGC-ACCT--AAAGAAGAATAAAA---TAAAATTTTGAAAT--AAAATCTAGAAAT-TTGATCTTTC--ataaatggggctcccaagcttcttttttttttggaaaa
gi|15 : GGTAGAAAATGCA-TCGA-AAGGAA-AATAAAC-TTTGGA---GTGAAATAAAAGTTTT-GAGATGTTGGTCTTTC--ATCTG-A-AG---ATT--CAAGCATAA-TTTAGGCA-GATAT-TTAAA-------ACAG-TTCAT------ACTT---T-ATTCA---TATTGAAATGATCG-AGGGGGCTTCCCAA--TTTT-----C--------CA--GAAAA-CAAA-----CA---TGG--TGG-ATTTT--CGG-AAAAT-TTTTAAAG-CA--CT-CGATCaatataaaatggcgaagtaacaa
gi|13 : AATAAAA-TTTGAA---TTGAAAT-AAGAGTTCAGAAAT-TTGATCTTTC--ATCTGAA-GATTCAT---G---CATAA-TTTAGGTA-GATCC-ATAAA-------ACAC-TCCAT------AC-T---TTATTTACG-TCTTGAAAA---TA-AGGGGTCTTTCCCA--TTTA-----T--T-----CA--TAAAA-CAAA-----CAT--T-G--CGG-ATTTT--CGGGAAATT-TT---AAAGCACTCT-CGCTTTTTTT-AGGA--T-TCAAGGATTCAT-GCG-CTCAGTAAATTAT-GAAAATTGTAGAATTGTTTAACATATGAAGGATCAGAGTATATT---G--TGATG----TTT--TATTTAATAATTTCG-CACAAGAAGATAAATAAAGTTTTC-ACT--CC-TCAAAA-TTAAATTATTCGGAG---CTG---GAAA--ACTATacctaaattattcgagactggaaaactattccg
gi|20 : AAAATTCAT-GCG-CTCAGTAATTTACGAAAA-TTGAAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCA--TGATG----TTT--TATTCAATAATTTTG-CACGAGATAAT----AAAGTTTTC-ACT--CA-CTAAAC-TT-AAtcggagcttggaaaac
gi|12 : aac-AATTGTTCTGAAGATCTACCCA--G--ATTATGCTTGATTCTTCAGATGAAAGATCA----------ATTTTT--TTTCAA---TCCAAA-GTTCATTC-TCCTT-TAGA-TGCATTTTCTACCCCTG---TGAGTA----------------------GAGG-TTA------ATCG--AA-C-TGGGGAAATCGTTGTA-AAG---CACAAAAA--AGGCGGCC---TTTatcaagacaaatgactatattccgga
gi|7 : ttacgttacgtatttaaaaccattttgtataccacaatagtaaattattaaacatttactttaaatatcttacaaaataatttttgc--A--ATTATGCACGATTCTTCAGATGAAAGATCGA-ATTTCTAAACTTTT-ATTTCAA---TTCAAATTTT-ATTCTTCTTT--AGAT-GCATTTTCTACCCCAG---TGAATA----------------------GGGA-CTA------TTCGGTA--C-TGGTAAAATCGATG-C-AAAGC--ACAGAAATGAG-CATCT---TTTTC--GTCGCCATAG-AAACTCTAGA-TGGTGAC--TT----A-TA--CA-A-GAA-CTATTTTGTGAGA-TATTTAAA---G-T-AAA-ATG-TTCA--AAT-TA---A-T-TG--------TTGA-AAT---GGG---AAAA--TGGTTTCAAAC-ACGTAA-CGTAGA--G--ATGATATCCCAG--TCT-AAAAATAC----CCTATTCGGAAC-TAGACAAcatactttatttacgtttgaaaaataaggtgctgctcgatttatagtgacgaattccggaaaattaagcactcatcttttcaggataacaaacttctgcgctcaataaattatgacaataacttattcaatagatgttcatagtatcaagtaaggagtcttttttatgcagaaatcttgcaacaagga
gi|6 : --A--ATTATGCATA-TTCTTCAGATGAAAGATCAA-ATTTCTA-ATTATTATTTTCAA---TCCAAATTTATACT----TTT-TAGA-TGCATTTTCT---CCTG---TGAACAG---------------------GGGG-CTG------ATCGG-AA-C-TGGTAAAATCG-TTGC-AAGGC-AGCCAAAAT--AGTGTCT---TTTTC--GCCATCTTAGAAAAAACTAGCATGGTGAT--TT-----TTA--C---AGAA-C-TATTTGTGATACTATTT---AAAGTT-AAACAAGATTCA--AAT-TATTCATT-TGTTTTTTTTTTGT-A---TGG-----AAAA--TGGTTTCAAAC-ATGT-TATGTAGA-----AT-ATATCCCAG--TCTAAAAAATAC----CCTATTCGGAAC-TAGGCAAAtatgtagatctatagaaccattcatactttcttcacgtcttgaaaacgaggagtctttccgattttttcttaaaataaacatggcggattttcggcaaattaagcactccctctttttaaggagctattaaaattcaagcgctcagtaaataacgaaaattgaagaattattcaacagatgaaggattaaagtttattataatgttttatttaataatttcgcaccaaaaaataaagttttcactcattaaacttaaattattcggaactggaaaactattcggaactaggcaa
gi|8 : g--A--ATTATGCTTGATTCTTCAGATGAAAGATCAA-ATCTC-AAAACTTTTATTTC-A---TACAAA-GTTTATTCTCATTT-T-GAGT-CATTTTCTACGCCTG---TGAATA----------------------GAGG-ATG------TCCAG-AA-C-TGG-GAAATTG-TTGC-ACG--TCAC------GGGG---CT---TTTTT--GTCGTCATAG-AAAGACTAG-GTGTTGAC--CT-----TTG--CG-AAAAT-T-ATTTCGTGAGA-TATTTAAAGAA----AAA-AAG-TTGA--AAT-AT---T-T-TG--------TTGG-TAT---GGA---AAAA--TGGTTTCCAAC-ACA-GAACGTAGCTCG--GTAATAATCCTG--TCT-GAAAATAC----CCTATTCGGGAGCTAGtatgtggatctataaagacattcatactttgttcacggtcttgaaattgaaggggctttccgattttttcagaaatacaaacatggcgtttttcggcaattaagcctcctcttttcaggagctgcataattctgcgtctcagtaaattaagaaatttgaagaatattaactgacgaagattaaaattcattctcactatgttttatctaataattttgcaatgaaagattaaaagtttttaactaccattaaacttaatattcggaactggaaaaacttattccgaac
gi|11 : tttcc--A--ATTATGCATGATTCTGCAGATGAAAGAT----GCC------------ATTTCAA---TCCTAATTTT-ATTCTTC-------ATTA-------TAACTCTA---GGATTA----------------------GGGG-ATA------TTCGGAA--C-TGGTACAATTGAT--CTAAGGCTCA--AATATAGA-TGTCT---TTTAACG-TCGTCCTAG-AAACATTAGA-TCGTGAC--TT-----TTA--CG-AAGAA-CTATTTCTTGAGA-TATTTAAAA----T-AAA-AAG-TTCA--AA--TA---A---TG--------TTGG-TAT---GGT---AAAA--TGGTATCtaggtatatcttcaaaacagttcatactttatttacgtctcgaaaatgaggtggcttccttattttataatcagaaaacaagcctggccggtttttggaatattaagcaatccatcttttcaaagagctgaaaaaattcatgctctgagtaaattatgaaaattgtagaattatttaacagataatcataataatattttacttaattcgtacgaaaagataaagttttcactcatttaaactttaattattcggaattggaaaacaattcggaacaaagaa
gi|9 : --A--ATTATGCATGATTCTGCAGATGAAAGAT----GCC------------ATTTCAA---TCCTAATTTT-ATTCTTC-------ATTA-------TAACTCTA---GGATTA----------------------GGGG-ATA------TTCGGAA--C-TGGTACAATTGAATCT-AAGGCTCAT--ATATAGA-TGTCT---TTTAACG-TCGTCCTAG-AA-CATTAGA-TCGTGAC--TT-----TTA--CG-AAGAAAT-ATTTCTTGAGA-TATTTAAA-----T-AAA-AAG-TTCA--AA--TA---A---TG--------TTGGTAAT---GTT---AAAA--TGGTtatgcaaatcttaaaaccattcatattattcagatctgaaaatgaggggactttccgactttttcataaaacaagtatgatggattttcggcaaattgagcactacatctttttaaggaaacaaaactcatgcactcagtaaaatacgaaaatcgaagaattatgtaacacgtggagaattaaagtttattatcatggcgttttatttaataatttcg
gi|10 : at--A--ATTATGCATGATTCTGCAGATGAAAGAT----GCC------------ATTTCAA---TCCTAATTTT-ATTCTTC-------ATTA-------TAACTCTA---GGATTA----------------------GGGG-ATA------TTCGGAA--C-TGGTACAATTGAATCT-AAGGCTCAT--ATATAGA-TGTCT---TTTAACG-TCGTCCTAG-AA-CATTAGA-TCGTGAC--TT-----TTA--CG-AAGAAAT-ATTTCTTGAGA-TATTTAAA-----T-AAA-AAG-TTCA--AA--TA---A---TG--------TTGGTAAT---GTT---AAAA--TGGTtatgcaaatcttataaaccattcatattattatcagatcttgaaaatgaggggactttccgactttttcataaacaagtatgatggattttcggcaaattgagcactacatctttttaaggaactaacaaaactcatgcactcagtaaaatacgaaaatcgaagaattatgtaacggtgagaaattaaagtttattatcatggcgttttatttaataatttcg
gi|13 : at--A--ATTATGCATGAATCTTCAGATGAAAGATCAA-ATTTCTG-AACTCTTATTTCAA---TTCAAA-TTTTATTtatgcaaatcttataaaccattcatattattatcagatcttgaaaatgaggggactttccgactttttcataaacaagtatgatggattttcggcaaattgagcactacatctttttaaggaactaacaaaactcatgcactcagtaaaatacgaaaatcgaagaattatgtaacgtgagaaattaaagtttattatcatggcgttttatttaataatttcg
gi|15 : --A--ATTATGCTTGAATCTTCAGATGAAAGACCAACATCTC-AAAACTTTTATTTCAC---TCCAAA-GTTTATT-TTCCTT-TCGA-TGCATTTTCTACCtaggtagatccataaaacactccatactttatttacgtcttgaaaataaggggtctttcccatttattcataaaacaaacattgcggattttcgggaaattttaaagcactctcgctttttttaggattcaaggattcatgcgctcagtaaattatgaaaattgtagaattgtttaacatatgaaggatcagagtatattgtgatgttttatttaataatttcgcacaagaagataaataaagttttcactcctcaaaattaaattattcggagctggaaaactattcggagcttggaaaac
gi|17 : --A--ATTATGCTTGATTCTTCAGATGGAAGATCAA-ATTTC-AAAACTTTAATTTCAG---TCCAAG-GTCCATTCTTA-TG-TAGA-TGCGTTTTCTA---------TGAATAGAC-------------------CAGG-CTA------TTCGGAAAGCATTGTAAGATtaggcagatatttaaaacagttcatactttattcatattgaaatgatcgagggggcttcccaattttccagaaaacaaacatggtggattttcggaaaatttttaaagcactcgatcacctaaattattcgagactggaaaactattccg
gi|14 : TATGCTTGATTCTTCAGATGAAAGATCAA-ATTTTTG-AACTTTTATTTCAA---TCCAAA-TTTCATTCTTC-TT-TAGA-TGCATTTTTTTTCCCCTGTGTGAATAGGGTTGATTGATTGATTATTTGTGGG-CTA------TTC-GAAA-T-TGATGAAATCtaggtatatagatcttcaaagcagttcattatagtacttaatttagtaatgtcttgaaaataaatggggctcccaagcttcttttttttttggaaaa
gi|2 : gtgctttacaaaTGATTTTAAAGATGAACGATCAC-ATTTCTA-AGCTTTTATTTCAA---TCCAAA-TTTTATTCTTC-----AAA-TGCATATTCCACCCTTG---TGAATA----------------------AAGG-TTG------TTTGG-AA-C-TGGTAAAATCG-TTGT-AAGA--CA-CAAAAT-AGGCCTCT---TTTTC--GTCGTTATAG-AAAAACTAG-ATGTTGACCTTT----AG-------AAAAT-T-ATTTTGTACGA-TATTT---AAAG-C-AAACAAA-TTTA--ACTATAT--A-T-TA--------TTGA-----TGTGA---AAAAGGTAAT---AGATAATGTAGAGATAAT-AGATATAATATTCCCG--CCT-AAAAATAC----CATA-TCGGAACTTaatttaggtagatttctgttcatcctttatttacgtcttaaaaatgcaggggctttccgatttttttttagaaaacaaacatggcggacattcaggaaattatgcattttgagaagctaacactcatcaaccttaaatta
gi|3 : ttttcTGATTTTAAAGATGAACGATCAC-ATTTCTA-AGCTTTTATTTCAA---TCCAAA-TTTTATTCTTC-----AAA-TGCA-ATTCCACCCTTG---TGAATA----------------------AAGG-TTG------TTTGG-AA-C-TGGTAAAATCG-TTGT-AAGA--CA-CAAAAT-AGGCCTCT---TTTTC--GTCGTTATAG-AAAAACTAG-ATGTTGACCTTT----AG-------AAAAT-T-ATTTTGTACGA-TATTT---AAAG-C-AAACAAA-TTT---AAC-TAT--A-TATA--------TTGA-TATGTGAAA---AAGG--TAAT---AGATAATGTAGAGATAAT-AGATATAATATTCCCG--CCT-AAAAATAC----CATA-TCGGAACTTagcggcataatttaagtagatcttcaagattattcatactttaattacgacttgaaaatgagggggcttttcgattttttttcttcagaatactcaaaattcacattgtggattttcgggaaattgagcattagcccttttaaggaactaattcatgcactcagtaaattatgaaaattgtagaattgtttaaaagatgaaggattagagtttattattgtcatgttttatttgatattggcacgggaagataaagttttaaagcatcagacttaaataattctgaaatggaagactattctaaactagaaaaactactgta
gi|5 : tcTGATTTTAAAGATGAACGATCAC-ATTTCTA-AGCTTTTATTTCAA---TCCAAA-TTTTATTCTTC-----AAA-TGCA-ATTCCACCCTTG---TGAATA----------------------AAGG-TTG------TTTGG-AA-C-TGGTAAAATCG-TTGT-AAGA--CA-CAAAAT-AGGCCTCT---TTTTC--GTCGTTATAG-AAAAACTAG-ATGTTGACCTTT----AG-------AAAAT-T-ATTTTGTACGA-TATTT---AAAG-C-AAACAAA-TTT---AAC-TAT--A-TATA--------TTGA-TATGTGAAA---AAGG--TAAT---AGATAATGTAGAGATAAT-AGATATAATATTCCCG--CCT-AAAAATAC----CATA-TCGGAACTTagcggcaaatttaagtagatcttcaagattattcatactttaattacgacttgaaaatgaggggcttttcgattttttttcttcagaatactcaaattcacattgtggattttttcgggaaattgagcattagcccttttaaggaactaattcatgcactcagtaaattatgaaaattgtaagattgtttaaaagatgaaggattagagtttattattgtcatgttttatttgtattggcacgggaagataaagttttaaagcatcagacttaaataattctgaaatggaagactattctaaactagaaaaactac
gi|4 : tcTGATTTTAAAGATGAACGATCAC-ATTTCTAAGCCTTTTATTTCAA---TCCAAA-TTTTATTCTTC-----AAA-TGCA-ATTCCACCCTTG---TGAATA----------------------AAGG-TTG------TTTGG-AA-C-TGGTAAAATCG-TTGT-AAGA--CA-CAAAAT-AGGCCTCT---TTTTC--GTCGTTATAG-AAAAACTAG-ATGTTGACCTTT----AG-------AAAAT-T-ATTTTGTACGA-TATTT---AAAG-C-AAACAAA-TTT---AAC-TAT--A-TATA--------TTGA-TATGTGAAA---AAGG--TAAT---AGATAATGTAGAGATAAT-AGATATAATATTCCCG--CCT-AAAAATAC----CATA-TCGGAACTTagcggcaaatttaagtagatcttcaagattattcatactttaattacgacttgaaaatgagggggcttttcgattttttttcttcagaatactcaaattcacattgtggttttttcgggaaattgagcattagcccttttaaggaactaattcatgcactcagtaaattatgaaaattgtaagattgttaaaagatgaaggattagagtttattattgtcatgttttatttgtattggcacgggaagataaagttttaaagcatcagacttaaataattctgaaatggaagactattctaaactagaaaaactac
gi|22 : tcTGAAAGATCAA-ATTTCTAGATTTT--ATTTCAAAATTTTA---TTTTATTCTTCTTT--AGGT-GCAGTTTGTACCCCTG---TGAATA----------------------GGGG-CTA------TTCGG-AA-C-TGagcggcaaatttaagtagatcttcaagattattcatactttaattacgacttgaaaatgagggggcttttcgattttttttcttcagaatactcaaattcacattgtggttttttcgggaaattgagcattagcccttttaaggaactaattcatgcactcagtaaattatgaaattgtaagattgttaaaagatgaaggattagagtttattattgtcatgttttatttgtattggcacgggaagataaagttttaaagcatcagacttaaataattctgaaatggaagactattctaaactagaaaaactac
gi|21 : TTTCAG---TTGAAATT------CTTCTTTCTAGAT-GCATTTTCTGCCCCTG---TGAATA----------------------GGAG-CTG------TTCGG-AA-C-TGGTAAAATCGAT-GT-AAGGCatataaaatggcgaagtaacaa
gi|25 : gt---TGAATT----------------------GGGG-CTACCGGTATTCGGAA--C-TGATAAAATCAACG-T-AAGGC--ACAAAGATAGG-TGTCT---TTTTC--GTCGTCATAG-AAAaatcatgcataattttagatatgtagatcta
gi|18 : TA----------------------AGGGTCTT------TTCGGAA--C-TGGTAAA-TCG-TTGT-AAGCCGCA--AAAATAGG-----TGAATTTATCG-TTGTCATAA-AG----TA-AATGGTGACC-TT----TG--------AAAA-C-ATTTTGTGA------------------AAA-ATG-T--------------G-T-TG--------TTGG-TAT---GGG---AAAA--TGGTTTCAAAC-ACGT-AATGTAG--AG--ATAATATATCAA--TCC-CAAAATAcga
gi|16 : agtcgatatgtacatggGAG-CTA------TTCGGAA--C-TGGTAAACTCGATG-T-AAGGC--ACGAAAATAGG-TGTCT---TATTT--GTCGTCATAG-AAACACTAGA-TGGCGAC--TTTTAAAATTTTCA-AAAAC-T-AGTTTGTGACA-TACTTAAA---G-T-AAA-AAG-TTCA--AAT-TA---A-T-TG--------TTGG-TAT---GGA---CAAA--TGGTTTCAAAC-ATGTAA-CGTAGA--G--ATGATACCCCAG--TCT-AAAAATAC----CCTATTCGGAACT
gi|19 : acctG-AAACACTAGA-TGGTGAC--TT------TC--CACAAGAA-CTATTTTGTGAGA-TATCTAAA---G-T-AAA-AAG-TTCA--AAT-CA---A-T-TG--------TTGC-TAT---GGA---AAAA--TGGTTTCAAAC-ATGTAA-CATAGA--G--ATGATATCCCAG--TCT-AAAAACAC----CCTATTCGGAAC-TAGCCAAA--TGACTGTAt
gi|12 : TG--CA-AAAAT-T-ATTTTGTAAGA-TATTT---AAAG-T--AA-ATG-TTTAATAAT-TT---A-C-TA--------TTG------TGGTATACAAAA--TGGTTTTAAAT-ACGT-AACGTAa
gi|28 : t-AAAAA-T-ATTTTGTTATA-TATTTAAA-----TCAAA-AAG-TTCA--AAT-TT---A-T-TG--------CTG----T-TTAAA---AAAA--AGATTTTAAAC-ATGTaaggccgccttttttgtgctttacaacgatttccccagttcgattaacctctactcacaggggtagaaaatgcatctaaaggagaatgaactttggattgaaaaaaaattgatctttcatctgaagaatcaagcataatctgggtagatcttcagaacaattcatactttatttacgtttgaaaaataaggtgctgctcgatttatagtgacgaattccggaaaattaagcactcatcttttcaggataacaaacttctgcgctcaataaattatgacaataacttattcaatagatgttcatagtatcaagtaaggagtcttttttatgcagaaatcttgcaacaagga
gi|27 : ---A-T-TG--------TTGG-TAT---GGG---AAAA--TGGTTTCAAAC-GTGTAA
gi|23 : AACGTGG---G--ATGATATTCCAGATTCT-AAAAAAAACGCGCCTATCCGAAAC-TAGCCAGAatacccttagatcttgaaaatagtatttgaactagaaaat
gi|29 : atgcagtattgtaatcagAAAATAC----CCTATTCGGAAC-TAGGCAAA--GGACTGTAC-TTTGAActgttccataccaatt
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|24 ): ATTTAGTTTCGGACATGAAAGAAGACTTAAGCTCTACTTTTCTATTTTCCTCCTATTCATATCACCCATCCTCTTTTCTTTCTCCTTTT
Unaligned ( gi|26 ): AAAACAAACTTTATTCAACATGTATAACATTTAAAGAATGCCAAAGGTGAACGAATATTCCAGGCGACGTGACGTATGATACTG
Unaligned ( gi|30 ): CAGTATTGTTTAAATTGGAGGAAAATGTGTTTTCTGGTTTTCATTTTTACCTATTATTTGA
Unaligned ( gi|31 ): TTACATAATATATTGCTAAGCGGATGGCACAATTTATTCATGAAA
Alignments
lowQualScore : 1 222222 1 1 3333 2222222222 1 222222222 333333333333 222222 11 2222222222222222222222 22 11 333333333333333333 1111 22222 11 22222222222222222 1111 1111 222222 222 3 222 1 4 4 4 1 1 1 4 666 1 1 11 222 11 1 2 11 1 111 11 11111 2
lowQualScore : 1 3 2 1 4 1 0 999999 2 2 2 0 4 4 1111 8888888 2 0000000000 4 2 3 888888888 2 33 1 8 888888888888 0 2 2 2 2 33 8 33 2 5 444444 77 2 666666 2 2222222222222222222222 444 1 3 66 5555 2 4444 2 88888 1 33 00 33 444444444444444444 3 1 5555 66 2 777777 0000 1 8 2 33 2 2 8888888 33 11111 33 66666 1 5 2 00 5555 66666666666666666 8888 1 33 0000 33 5555 444444 2 2 2 777 2 1 11 1 6 3 3 88 5 4 777 000 0 666 4 1 4 1 33 1 4 6 6 0 77 6 0 0 5 5 5 6 0 6 111 6 55 5 5 66 6 1 111 66 88 2 7 7 6 1 88 3 1 777 88 1 88888 0
lowQualScore : . . . . . . . ...... . . . . . . .... ....... . .......... . . . ......... . .. . . ............ . . . . . .. . .. . . ...... .. . ...... . ...................... ... . . .. .... . .... . ..... . .. .. .. .................. . . .... .. . ...... .... . . . .. . . ....... .. ..... .. ..... . . . .. .... ................. .... . .. .... .. .... ...... . . . ... . . .. . . . . .. . . ... ... . ... . . . . .. . . . . . .. . . . . . . . . . ... . .. . . .. . . ... .. .. . . . . . .. . . ... .. . ..... .
lowQualScore : 0 6 8 1 0 0 4 555555 0 7 3 3 9 0 1111 1111111 5 0000000000 0 7 3 333333333 7 77 0 0 222222222222 7 9 9 9 0 77 0 55 7 3 000000 66 1 111111 1 4444444444444444444444 444 2 9 55 1111 2 7777 2 22222 2 22 33 44 444444444444444444 2 0 3333 22 8 222222 1111 5 1 5 44 5 5 1111111 44 22222 44 22222 9 9 5 33 7777 55555555555555555 5555 5 77 3333 77 5555 999999 7 7 9 999 0 5 22 0 2 1 5 22 4 0 000 444 6 111 0 0 3 0 55 0 0 0 0 0 00 0 0 0 0 0 0 0 0 0 000 0 00 5 0 55 0 0 555 55 00 0 3 0 0 0 33 3 2 555 88 0 55555 0
consensus : NTTTGCCTAAGTTCCGAATAGGGTATTTTT-AGACNGGAATATTATATCTA-CTACGTTTACGT-GTTTGAAACCATTTTTCCCAATAC-------CAAC-A-AT---TA-ATTTGAA-CTT-TTT-ACTTTTTTAAATA-TCTCACG--AAATANTT-TTCG-------TAA-AGGTCACCA-T-CTAG-TNTTTCTATGACGAC--GA-AAAAGACG-CCTAT-TT-TGGTG-GCCTTACAATCGATTTTACCAG-TTCCGAA------TAG-CCC----------------------CTATTCACA---GGGGTAGAAAATGCA-TCT-AAAGAAGAAT-AAAAT----TTGGATTG-AAATAAAA-GCT-TAGAAAT-TTGATCTTTCATC--T--G-A--G--A-TCA-GC-G-CATAATTTANG----TAGATCTTCAAAACNATTCA------TACT---TTTATTCAC-GTCTTGAAA--AT-GAG-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAA-A--C----AA---A--CA---T-G--CGG-A--TTTTCGGGAAA--TT----GAGCA--CTNGCTCTTTTTAAGGAACT-A-C--AA-AATTCAT-GCG-CTCAGTAAATTAC-GAAAATTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCGTNATG-TTT-TATTTAATAATTTCGGCACGAGAAGA-TA---AAGGTTTTTAACT--CA-TCAAACTTAAATNATTCGGAANTGGAACTATGNATGGTTCTTCAGNTGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACNCTAGAATGGTGACCTTANCACAAGGANCATTTTGTGAGATATCTAAAAAAGTAAAAAGTTCAAATCAATTGTTGNNATTGGGAAAAATGGTTTCGAACACGTAAACGTAG-AGATGATATTCCAG--TCT-AAAAATAC---CCTATTCGGAACTTAGCCAAA--GGACTGTACGTTTGAGT
Reference ( family-3174 ) : NTTTGNCTAAGTTCCGAATAGGGTATTTTT-AGACNGGAATATTAT--CTN-CTACGTTTACGT-GTTTGAAACCATTTTTCCCAATAC-------CAAC-A-AT---TA-ATTTGAA-CTT-TTT-ACTTTTTTAAATA-TCTCACA--AAATANTT-TTCG-------TANTAAGTCACCA-T-CTAG-TNTTTCTATGACGAC--GA-AAAAGACG-CCTAT-TT-TGGTG-GCCTTACAATCGATTTTACCAG-TTCCGAA------TAG-CCC----------------------CTATTCACA---GGGGTAGAAAATGCAATCT-AAAGAAGAAT-AAAAT----TTGGATTG-AAATAAAA-GNT-TAGAAAT-TTGATCTTTCATC--T--G-A--G--A-TCATGC-G-CATAATTTANG----TAGATCTNCAAAACCATTCA------TACT---TTTATTCAC-GTCTTGAAA--AT-GAG-GGGGCT-------TTCCGA--TTTT-----T--T-----CANANA-A--C----AA---A--CA---T-G--CGG-A--TTTTCGGGAAA--TT----GAGCA--CTCGCTCTTTTTAAGGAACT-A-C--AA-AATTCAT-GCG-CTCAGTAAATTACGGAAAATTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCGTNATGTTTT-TATTTAATAATTTCGGCACGAGAAGA-TA---AAGGTTTTCAACT--CA-TCAGACTTAAATNATTCTGAANTGGAATTATGCNTGATTCTNCAGATGAAAGATCAAATTTCTA-ANCTTTTATTTCAATCCAAA-TTTTATTCTTC-TTTAGATTGCATTTTCTACCCCTGTGAATAGGGGCTATTCGGAAACTGGTAAAATCGATTGTAAGGC-CACCAAAATAGGGCGTCTTTTTC--GTCGTCATAGAAANACTAGAATGGTGACCTTANTACGAAAANTATTTTGTGAGATATTTAAAAAAGTAAAAAGTTCAAATTAATTGTTGGTATTGGGAAAAATGGTTTCAAACACGTAAACGTAGNAGATAATATTCCNG--TCT-AAAAATAC---CCTATTCGGAACTTAGNCAAA--NGACTGTAC-TTTGAAT
gi|1 : TTTGGCTAAGTTCCGAATAGGTTATTTTT-AGACTGGAATATCAT--CTT-CTACGTTTACGT-GTTTGAAATCATTTTTCCCAATTC-------CAAC-A-AT---TA-ATTTGAA-CTT-TTT-ACTTTTTTAAATA-TCTCACA--AAATGTTC-TTTG-------TACTAAGTCACCATT-CTAG-AGTTTCTATGATGACCGAA-AAAAGACGCCCCAT-TT-TGGTGAGCCTTGCCATCGATTTTACCAGTTTCCGAA------TAG-CCC----------------------ATATTCAAA---GGGGTAGAAAATGCAATCTAAAAGAAGAATAAAAAT----TTGAATTG-AAATAAAA-AATATAGAGAC-TTGATCTTTCCTC--T--G-A--G--A-CCAT-C-C-CATAGTTTATG----TAG-TCTATAGAACCATTCA------TACT---TTTCTTCAC-GTCTTGAAA--TT-GAG-GAGTCT-------TTCCGA--TTTT-----T--T-----CAAATA-A--C----AA---A--CA---T-G--CGG-A--TTTTCGGCAAAATTT----AAACA--CTCGTTCTTTTTAAGGAGCT-A-TCAAA-AATTCATCGCG-CTCAGTAAATAACAAAAAATTGAAGAATTATTTAGCAGATGAAAGATTAAAGTTTATTATCATAATGTTTTATATTCAATAATTTTGCCACGAAAAGA-TA---AAAGTTTTTAACT--CA-TTAAACTT-AATTATTCGGAACTGGAACTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACTCTAGAATGGTGA-CTTAGTACAAAGAACATTTTGTGAGATATTTAAAAAAGTAAAAAGTTCAAATTAATTGTTGGAATTGGGAAAAATGATTTCAAACACGTAAACGTAGAAGATGATATTCCAG--TCT-AAAAATAA---CCTATTCGGAACTTAGCCAAAACGGACTGTACGTTTAAGT
gi|10 : tACCATTTT-AACATTAC-------CAAC-A--T---TA--TTTGAA-CTT-TTT-A----TTTAAATA-TCTCAAG--AAATATTTCTTCG-------TAA-AAGTCACGA-T-CTAA-TGTT-CTAGGACGAC--GTTAAAAGACA-TCTAT-ATATGA---GCCTTAGATTCAATTGTACCAG-TTCCGAA------TAT-CCC----------------------CTAATCCTA---GAGTTA------------T-AATGAAGAAT-AAAAT----TAGGATTG-AAATG----GC-------------ATCTTTCATC--T--GCA--G--AATCATGC----ATAATTTATG----CAAATCTTATAAACCATTCA------TATT---ATTAT-CAG-ATCTTGAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--T-----CATA-A-A--C----AA---G--TA---T-GA-TGG-A--TTTTCGGCAAA--TT----GAGCA--CTACATCTTTTTAAGGAACTAA-C--AA-AACTCAT-GCA-CTCAGTAAAATAC-GAAAATCGAAGAATTATGTAAC--GTGAGAAATTAAAGTTTATTATCATGGCG-TTT-TATTTAATAATTTCGatatttcaaagaatgaaatttatttctgaaa
gi|11 : atGATACCATTTTACC--ATAC-------CAAC-A--T---TA--TTTGAA-CTT-TTT-A---TTTTAAATA-TCTCAAG--AAATAGTTCTTCG-------TAA-AAGTCACGA-T-CTAA-TGTTTCTAGGACGAC--GTTAAAAGACA-TCTATATT-TGA---GCCTTA-GATCAATTGTACCAG-TTCCGAA------TAT-CCC----------------------CTAATCCTA---GAGTTA------------T-AATGAAGAAT-AAAAT----TAGGATTG-AAATG----GC-------------ATCTTTCATC--T--GCA--G--AATCATGC----ATAATTTATG----CAAATCTT-AAAACCATTCA------TA------TTATTCAG-ATCT-GAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--T-----CATAAA-A--C----AA---G--TA---T-GA-TGG-A--TTTTCGGCAAA--TT----GAGCA--CTACATCTTTTTAAGGAA---A-C--AA-AACTCAT-GCA-CTCAGTAAAATACG-AAAATCGAAGAATTATGTAACACGTGGAGAATTAAAGTTTATTATCATGGCG-TTT-TATTTAATAATTTCG
gi|12 : TACGTT-ACGT-ATTTAAAACCATTTTGT---ATAC-------CA-C-A-AT----A-GT--AAA------TT-A-----TTAAACA-TTT-ACTTTAAATATCT-TACA-------AAATAA---------------TTTTT------------GC-AAAGGCCG-CCT-T-TT-TTGTG--CTTTACAA-CGATTTCCCCAG-TTC-GAT------TAA-CCT----------------------CTACTCACA---GGGGTAGAAAATGCA-TCT-AAAGGAGAAT-GAACT----TTGGATTG-AAAAAAAA-------------TTGATCTTTCATC--T--G-A--AGAA-TCA--A-G-CATAATCTGGG----TAGATCTTCAGAACAATTCA------TACT---TT-ATTTAC-GT-TTGAAA--AA-TAA-GGTGCT-------GCTCGA--TTT------------------ATA-G--T----GA----------------CGA-A--TTC-CGGAAAA--TT----AAGCA--CTCA-TCTTTTCA--GGATA-A-C--AA-ACTTC-T-GCG-CTCAATAAATTAT-GACAAT----AACTTATTCAATAGATG
gi|13 : tAAT-AAAAT----TTGAATTG-AAATAAGA-GTT-CAGAAAT-TTGATCTTTCATC--T--GAA--G--ATTCAT---G-CATAATTTAGG----TAGATCCATAAAACACTCCA------TAC----TTTATTTAC-GTCTTGAAA--AT-AAG-GGGTCT-------TTCCCA--TTTA-----T--T-----CATAAA-A--C----AA---A--CAT--T-G--CGG-A--TTTTCGGGAAA--TTTTA-AAGCACTCTCGCTTTTTTT-AGGA--T-T-C--AAGGATTCAT-GCG-CTCAGTAAATTAT-GAAAATTGTAGAATTGTTTAACATATGAAGGATCAGAGTATATT---GTGATG-TTT-TATTTAATAATTTC-GCACAAGAAGA-TAAATAAAGTTTTC-ACT--CC-TCAAAATTAAATTATTCGGAGCTGGAAttcatagtatcaagtaaggagtcttttttatgcagaaatcttgcaacaagga
gi|14 : -GCTTTACAA-AGATTTCATCAA-TTTCGAA------TAG-CCCACAAATAATCAATCAATCAACCCTATTCACACAGGGGAAAAAAAATGCA-TCT-AAAGAAGAAT-GAAAT----TTGGATTG-AAATAAAA-GTT-CAAAAAT-TTGATCTTTCATC--T--G-AAGA--A-TCAAGC-A-TA-AATTTAGG----TAGATTT------CTGTTCA------T-CC---TTTATTTAC-GTCTTAAAA--AT-GCA-GGGGCT-------TTCCGATTTTTT-----T--T-----TAGAAA-A--C----AA---A--CA---TGG--CGG-A--CATTCAGGAAA--TT----ATGCA----------TTTTGAGAAGCT------AA-CACTCAT-aactattcggagcttggaaaac
gi|15 : gtGGTAGAAAATGC-ATCG-AAAGGAAAAT-AAACT----TTGGAGTG-AAATAAAA-GTT-TTGAGATGTTGGTCTTTCATC--T--GAA--G--ATTCA--A-G-CATAATTTAGG----CAGATATTTAAAACAGTTCA------TAC----TTTATTCA---TATTGAAATGATCGAG-GGGGCT-------TCCCAA---TTT-----T--C-----CAGAAA-A--C----AA---A--CA---TGG--TGG-A--TTTTCGGAAAA--TTTTTAAAGCA--CTCGATCcaaccttaaatta
gi|16 : AGTTCCGAATAGGGTATTTTT-AGACTGGGGTATCAT--CT--CTACGTT-ACAT-GTTTGAAACCATTTGTCC--ATAC-------CAAC-A-AT---TA-ATTTGAA-CTT-TTT-ACTTT---AAGTA-TGTCACA--AACTAGTT-TTTGAAAATTTTAA-AAGTCGCCA-T-CTAG-TGTTTCTATGACGAC--AA-ATAAGACA-CCTAT-TT-TCGT--GCCTTAC-ATCGAGTTTACCAG-TTCCGAA------TAG-CTC----------------------acctaaattattcgagactggaaaactattccg
gi|17 : acct-TTCCGAA------TAG-CCTGGT-------------------CTATTCA---------TAGAAAACGCA-TCT-ACATAAGAAT-GGACC----TTGGACTG-AAATTAAA-GTT-TTGAAAT-TTGATCTTCCATC--T--G-AAGA--A-TCA--A-G-CATAATTTAGGTATATAGATCTTCAAAGCAGTTCATTATAGTACTTAATTTAGTAAT-GTCTTGAAA--AT-AAATGGGGCTCCCAAGCTTCTTT--TTTT-----T--T-----TGGAAA-A--t
gi|18 : atcttacaatgctGGTATTTTG-GGATTGATATATTAT--CT--CTACATT-ACGT-GTTTGAAACCATTTTCCC--ATAC-------CAAC-A-AC----------------------ACATTTTT---------CACA--AAAT-GTT-TTC---------AA-AGGTCACCA-T-TTA-----CTTTATGACAAC--GA-TAAATTCA-CCTAT-TT-TTGCG-G-CTTACAA-CGA-TTTACCAG-TTCCGAA------AAG-ACC----------------------CT
gi|19 : agtcgatatgtacatGAAACACTAGA-TGGTGACTTT-CCACAAGAACTATTTTGTGAGATATCTAAA---GTAAAAAGTTCAAATCAATTGTTGCTAT--GGAAAAATGGTTTCAAACATGTAA-CATAG-AGATGATATCCCAG--TCT-AAAAACAC---CCTATTCGGAAC-TAGCCAAA--TGACTGTAta
gi|2 : AAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-TTATCTCTACATTATCTATTACC-TTTTTC---ACAT-------CAAT-A-ATA--TATAGTTAAA-TTTGTTT-GCTTT---AAATA-TCGTACA--AAATAATT-TTC--------TAA-AGGTCAACA-T-CTAG-TTTTTCTATAACGAC--GA-AAAAGAGG-CCTAT-TT-TG-TG--TCTTACAA-CGATTTTACCAG-TTCCAAA------CAA-CCT----------------------TTATTCACA---AGGGTGGAATATGCA-TTT----GAAGAAT-AAAAT----TTGGATTG-AAATAAAA-GCT-TAGAAAT-GTGATCGTTCATC--TTTA-A--A--A-TCAAGC-GGCATAATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-AC-GACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTT-----T--TTTCTTCAGAAT-A--CTCAAAATTCA--CA---TTG--TGG-A--TTTTCGGGAAA--TT----GAGCA--TTAGCCCTTTT-AAGGAACT-A--------ATTCAT-GCA-CTCAGTAAATTATG-AAAATTGTAGAATTGTTTAAAAGATGAAGGATTAGAGTTTATTATTGTCATG-TTT-TATTTGATA---TTGGCACGGGAAGA-TA---AAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAa
gi|20 : ttttc-A-C--AA-AATTCAT-GCG-CTCAGTAATTTACG-AAAATTGAAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCATGATG-TTT-TATTCAATAATTTT-GCACGAGATAA-TA---AA-GTTTTC-ACT--CA-CTAAACTTAAATCAgactattctaaactagaaaaactactgta
gi|21 : a-GCCTTACA-TCGATTTTACCAG-TTCCGAA------CAG-CTC----------------------CTATTCACA---GGGGCAGAAAATGC-ATCT-AGA-AAGA---AGAAT----TTCAACTG-AAAagacaaatgactatattccgga
gi|21 : gtAATTATGCATGATTTTTCAGTTGAAAaatcatgcataattttagatatgtagatcta
gi|22 : gtgccttacatcgattttaccagttccgaacagctcctattcacaggggcagaaaatgcatctagaaagaagaaCAG-TTCCGAA------TAG-CCC----------------------CTATTCACA---GGGGTACAAACTGC-ACCT-AAAGAAGAAT-AAAATAAAATT---TTG-AAATAAAA--TC-TAGAAAT-TTGATCTTTCAttagatatgtagatcta
gi|23 : AATTGGTATGGAACA---GAACGTGG--GATGATATTCCAGATTCTAAAAAAAACGCGCCTATCCGAAAC-TAGCCA-----GACTGatataaaatggcgaagtaacaa
gi|25 : atgcagtattgtaatTTTCTATGACGAC--GA-AAAAGACA-CCTAT-CT-TTGT--GCCTTAC-GTTGATTTTATCAG-TTCCGAATACCGGTAG-CCC----------------------CAATTCAC
gi|27 : TTACAC-GTTTGAAACCATTTTCCC--ATAC-------CAAC-A-AT---ga
gi|28 : ACAT-GTTTAAAATCTTTTTTTTAAA----------CAGC-A-AT---AA-ATTTGAA-CTT-TTT-GATTT---AAATA-TATAACA--AAATATTT-TTatacccttagatcttgaaaatagtatttgaactagaaaat
gi|29 : AAAATAC---CCTATTCGGAACT-AGGCAAA--GGACTGTAC-TTTGAAT
gi|3 : taagcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-TTATCTCTACATTATCTATTACC-TTTTTCACA-TAT-------CAAT-ATATA--TA-GTT-AAA-TTTGTTT-GCTTT---AAATA-TCGTACA--AAATAATT-TTC--------TAA-AGGTCAACA-T-CTAG-TTTTTCTATAACGAC--GA-AAAAGAGG-CCTAT-TT-TG-TG--TCTTACAA-CGATTTTACCAG-TTCCAAA------CAA-CCT----------------------TTATTCACA---AGGGTGGAAT-TGCA-TTT----GAAGAAT-AAAAT----TTGGATTG-AAATAAAA-GCT-TAGAAAT-GTGATCGTTCATCTTT--A-A--A--A-TCAAGCGG-CA-AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-AC-GACTTGAAA--AT-GA--GGGGCT-------TTTCGA--TTTTTTTTCT--T-----CAGAAT-ACTC----AA---ATTCACATT-G--TGG-ATTTTTTCGGGAAA--TT----GAGCA--TTAGC-CCTTTTAAGGAACT---------AATTCAT-GCA-CTCAGTAAATTAT-GAAAATTGTAAGATTGTTTAAAAGATGAAGGATTAGAGTTTATTATTGTCATG-TTT-TATTT-GTA---TTGGCACGGGAAGA-TA---AAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAatctctactttaca
gi|4 : tcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-TTATCTCTACATTATCTATTACC-TTTTTCACA-TAT-------CAAT-ATATA--TA-GTT-AAA-TTTGTTT-GCTTT---AAATA-TCGTACA--AAATAATT-TTC--------TAA-AGGTCAACA-T-CTAG-TTTTTCTATAACGAC--GA-AAAAGAGG-CCTAT-TT-T-GT--GTCTTACAA-CGATTTTACCAG-TTCCAAA------CAA-CCT----------------------TTATTCACA---AGGGT-GGAATTGC-ATTT----GAAGAAT-AAAAT----TTGGATTG-AAATAAAAGGCT-TAGAAAT-GTGATCGTTCATCTTT--A-A--A--A-TCAAGCGG-CA-AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-AC-GACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTTTTTTCT--T-----CAGAAT-ACTC----AA---ATTCACATT-G--TGGTT--TTTTCGGGAAA--TT----GAGCA--TTAGC-CCTTTTAAGGAACT---------AATTCAT-GCA-CTCAGTAAATTATG--AAATTGTAAGATTG-TTAAAAGATGAAGGATTAGAGTTTATTATTGTCATG-TTT-TATTT-GTA---TTGGCACGGGAAGA-TA---AAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAgactattctaaactagaaaaactac
gi|5 : tcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-TTATCTCTACATTATCTATTACC-TTTTTCACA-TAT-------CAAT-ATATA--TA-GTT-AAA-TTTGTTT-GCTTT---AAATA-TCGTACA--AAATAATT-TTC--------TAA-AGGTCAACA-T-CTAG-TTTTTCTATAACGAC--GA-AAAAGAGG-CCTAT-TT-TG-TG--TCTTACAA-CGATTTTACCAG-TTCCAAA------CAA-CCT----------------------TTATTCACA---AGGGTGGAAT-TGCA-TTT----GAAGAAT-AAAAT----TTGGATTG-AAATAAAA-GCT-TAGAAAT-GTGATCGTTCATCTTT--A-A--A--A-TCAAGCGG-CA-AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-AC-GACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTTTTTTCT--T-----CAGAAT-ACTC----AA---ATTCACATT-G--TGGTT--TTTTCGGGAAA--TT----GAGCA--TTAGC-CCTTTTAAGGAACT---------AATTCAT-GCA-CTCAGTAAATTAT-GAAAATTGTAAGATTG-TTAAAAGATGAAGGATTAGAGTTTATTATTGTCATG-TTT-TATTT-GTA---TTGGCACGGGAAGA-TA---AAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAgactattctaaactagaaaaactac
gi|6 : tcTTTGCCTA-GTTCCGAATAGGGTATTTTTTAGACTGGGATAT-AT----T-CTACATA-ACAT-GTTTGAAACCATTTTCC---ATACAAAAAAAAAACAA-ATGAATA-ATTTGAATCTTGTTTAAC---TTTAAATAGTATCAC---AAATAGTT-CT-G-------TAA-AAATCACCA-TGCTAGTTTTTTCTAAGATGGC--GA-AAAAGACA--CTAT-TT-TGGCT-GCCTTGCAA-CGATTTTACCAG-TTCCGAT------CAGCCCC----------------------CTGTTCACA---GG---AGAAAATGC-ATCT-AAA-AAGTAT--AAAT----TTGGATTGAAAATAATA--AT-TAGAAAT-TTGATCTTTCATC--T--GAA--G--A---ATAT-G-CATAATTTATG----TGGATCTATAAAGACATTCA------TAC----TTTGTTCACGGTCTTGAAA--TT-GAA-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAATA--C----AA---A--CA---T-G--GCG-T--TTTTC-GGCAA--TT----AAGC---CTC-CTCTTTTC-AGGAGCT-G-C--AT-AATTC-T-GCGTCTCAGTAAATTA-AGAAATTTGAAGAA-TA-TTAACTGACGAA-GATTAAAATTCATTCTCACTATG-TTT-TATCTAATAATTTTGCAATGA-AAGATTA---AAAGTTTTTAACTACCA-TTAAACTTAA--TATTCGGAACTGGAAgactattctaaactagaaaaactac
gi|7 : gTTGTCTA-GTTCCGAATAGGGTATTTTT-AGACTGGGATATCAT--CT--CTACGTT-ACGT-GTTTGAAACCATTTTCCC--ATTT-------CAAC-A-AT---TA-ATTTGAA-CAT-TTT-ACTTT---AAATA-TCTCACA--AAATAGTT-CTTG-------TA-TAAGTCACCA-T-CTAG-AGTTTCTATGGCGAC--GA-AAAAGATG-CTCAT-TT-CTGTG--CTTTGCA-TCGATTTTACCAG-TACCGAA------TAG-TCC----------------------CTATTCACT---GGGGTAGAAAATGCA-TCT-AAAGAAGAAT-AAAAT----TTGAATTG-AAATAAAA-GTT-TAGAAAT-TCGATCTTTCATC--T--G-AAGA--A-TC--GT-G-CATAATTTATG----TAGATCTATAGAACCATTCA------TACT---TTC-TTCAC-GTCTTGAAA--AC-GAG-GAGTCT-------TTCCGA--TTTT-----T--T-----CTTAAA-A--T----AA---A--CA---TGG--CGG-A--TTTTCGGCAAA--TT----AAGCA--CTCCCTCTTTTTAAGGAGCT-ATT--AA-AATTCAA-GCG-CTCAGTAAATAAC-GAAAATTGAAGAATTATTCAACAGATGAAGGATTAAAGTTTATTA---TAATG-TTT-TATTTAATAATTTC-GCACCAAAAAA-TA---AA-GTTTTC-ACT--CA-TTAAACTTAAATTATTCGGAACTGGAAaaacttattccgaac
gi|8 : TTTCCCTAGCTCCCGAATAGGGTATTTTC-AGACAGGATTATTAC--CGAGCTACGTTC-TGT-GTTGGAAACCATTTTTCC--ATAC-------CAAC-A-AA---AT-ATTTCAA-CTT-TTT---TTCTTTAAATA-TCTCACG--AAATAATT-TTCG-------CAA-AGGTCAACA-C-CTAG-TCTTTCTATGACGAC--AA-AAAAGCC--CC---------GTG-ACGT-GCAA-CAATTTC-CCAG-TTCTGGA------CAT-CCT----------------------CTATTCACA---GGCGTAGAAAATG-ACTCA-AAATGAGAAT-AAACT----TTGTAT-G-AAATAAAA-GTT-TTGAGAT-TTGATCTTTCATC--T--G-AAGA--A-TCA--A-G-CATAATTTAGG----TATATCTTCAAAACAGTTCA------TAC----TTTATTTAC-GTCTCGAAA--AT-GAG-GTGGCT-------TCCTTA--TTTTA----TAAT-----CAGAAA-A--C----AA---G--CC---T-GGCCGG----TTTTTGGAATA--TT----AAGCA--ATCCATCTTTTCAAAGAGCTGA-A--AA-AATTCAT-GCT-CTGAGTAAATTAT-GAAAATTGTAGAATTATTTAACAGATA--------------ATCATAATAATA-TTT-TACTTAA----TTC-GTACGAAAAGA-TA---AA-GTTTTC-ACT--CATTTAAACTTTAATTATTCGGAATTGGAAaactattcggaactaggcaa
gi|9 : ACCATTTT-AACATTAC-------CAAC-A--T---TA--TTTGAA-CTT-TTT-A----TTTAAATA-TCTCAAG--AAATATTTCTTCG-------TAA-AAGTCACGA-T-CTAA-TGTT-CTAGGACGAC--GTTAAAAGACA-TCTAT-ATATGA---GCCTTAGATTCAATTGTACCAG-TTCCGAA------TAT-CCC----------------------CTAATCCTA---GAGTTA------------T-AATGAAGAAT-AAAAT----TAGGATTG-AAATG----GC-------------ATCTTTCATC--T--GCA--G--AATCATGC----ATAATTTATG----CAAATCTTATAAACCATTCA------TATT---ATTAT-CAG-ATCTTGAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--T-----CATA-A-A--C----AA---G--TA---T-GA-TGG-A--TTTTCGGCAAA--TT----GAGCA--CTACATCTTTTTAAGGAACTAA-C--AA-AACTCAT-GCA-CTCAGTAAAATAC-GAAAATCGAAGAATTATGTAAC-GGTGAGAAATTAAAGTTTATTATCATGGCG-TTT-TATTTAATAATTTCGaacaattcggaacaaagaa
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): ATTTAGTTTCGGACATGAAAGAAGACTTAAGCTCTACTTTTCTATTTTCCTCCTATTCATATCACCCATCCTCTTTTCTTTCTCCTTTT
Unaligned ( gi|26 ): AAAACAAACTTTATTCAACATGTATAACATTTAAAGAATGCCAAAGGTGAACGAATATTCCAGGCGACGTGACGTATGATACTG
Unaligned ( gi|30 ): CAGTATTGTTTAAATTGGAGGAAAATGTGTTTTCTGGTTTTCATTTTTACCTATTATTTGA
Unaligned ( gi|31 ): TTACATAATATATTGCTAAGCGGATGGCACAATTTATTCATGAAA
Alignments
lowQualScore : 1 11 3333 22222222222 1 2222222222 11111111 222222 11 2222222222222222222222 11 444444444444444 1111 22222 11 22222222222222222 1111 111111 222222 33 22222 1 1 11 222 11 1 11 111111 111 2 11111 1
lowQualScore : 9 2 1 4 1 0 88 7777 88 6 3 9 0 4 4 1111 33 8888888 00000000000 33 2 3 6666666666 2 0 4 1 8 88888888 2 1 0 5 2 2 33 8 2 2 5 444444 77 2 666666 2222222222222222222222 2 444 1 2 2 5555 2 4444 2 2 77777 1 33 00 33 333333333333333 2 22 1 5555 33 1 777777 0000 1 8 2 33 2 2 8888888 33 11111 33 66666 0 2 00 5555 44444444444444444 8888 1 33 0000 777777 444444 2 2 2 2 2 1 11 1 44 3 88 5 4 777 22 3 666 4 0 1 1 1 77777 1 1 1 5 5 66 1 111 22 88 0 2 55 33 2 0 444444 1 777 7 66666 5
lowQualScore : . . . . . . .. .... .. . . . . . . .... .. ....... ........... .. . . .......... . . . . . ........ . . . . . . .. . . . . ...... .. . ...... ...................... . ... . . . .... . .... . . ..... . .. .. .. ............... . .. . .... .. . ...... .... . . . .. . . ....... .. ..... .. ..... . . .. .... ................. .... . .. .... ...... ...... . . . . . . .. . .. . .. . . ... .. . ... . . . . . ..... . . . . . .. . ... .. .. . . .. .. . . ...... . ... . ..... .
lowQualScore : 0 8 1 0 0 4 55 4444 55 5 1 2 3 9 0 1111 44 1111111 99999999999 77 7 3 7777777777 7 6 6 0 0 33333333 9 6 7 7 0 7 77 0 7 7 3 444444 66 1 111111 4444444444444444444444 2 444 2 6 4 1111 2 7777 2 4 00000 2 22 33 44 555555555555555 5 77 0 3333 44 0 222222 1111 5 1 5 44 5 5 1111111 44 22222 44 22222 2 5 33 7777 22222222222222222 5555 5 77 3333 888888 999999 7 7 9 9 0 5 22 0 22 5 22 4 0 000 88 1 111 0 8 0 1 0 77777 0 0 0 5 0 55 0 555 00 00 7 0 88 22 5 8 000000 2 555 8 55555 0
consensus : NTTTGCCTAAGTTCCGAATAGGGTATTTTT-AGACNGGAATATTATATCTA-C-TACGTTTACG-T-GTTTGAAACCATTTTTCCCAATACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTTTTTAAATA-TCTCACGAAATANTT-TTCG-------TAA-AGGTCACCAT-CTAGTNTTT-CTATGACGAC--GA-AAAAGACGCCT-AT-TT-TGGTG-GCCTTACAATCGATTTTACCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGGATTG-AAATAA-AA-GCT-TAGAAAT-TTGATCTTTCATC--T--G-AA-GA-TC-A-GC-G-CAT-AATTTANG----TAGATCTTCAAAACNATTCA------TACT---TTTATTCAC-GTCTTGAAA--AT-GAG-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAA-A--C----AA---A--CA---T-G--CGG-A--TTTTCGGGAAA--TT----GAGCACTN--GCTCTTTTTAAGGAACT-A-C--AAA-ATTCAT-GCG-CTCAGTAAATTACGAAAA-TTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCGTNATGTTTTAT--TTAATAATTTCGGCACGAGAAGA-TA---AAG--TTTTAACT--CA-TCAAACTTAAATNATTCGGAANTGG--AAGACTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACNCTAGAATGGTGACCTTANCACAAGGANCATTTTGTGAGATATCTAAAAAAGTAAAAAGTTCAAATCAATTGTTGNNATTGGGAAAAATGGTTTCGAACACGTAAACGTAG-AGATGATATTCCAG--TCT-AAAAATAC---CCTATTCGGAAC-TAGCCAAA--GGACTGTACGTTTGAGT
Reference ( family-3174 ) : NTTTGCCTAAGTTCCGAATAGGGTATTTTT-AGACNGGAATATTATATCTA-C-TACGTTTACG-T-GTTTGAAACCATTTTTCCCAATACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTTTTTAAATA-TCTCACGAAATANTT-TTCG-------TAA-AGGTCACCAT-CTAGTNTTT-CTATGACGAC--GA-AAAAGACGCCT-AT-TT-TGGTG-GCCTTACAATCGATTTTACCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGGATTG-AAATAA-AA-GCT-TAGAAAT-TTGATCTTTCATC--T--G-A--GA-TC-A-GC-G-CAT-AATTTANG----TAGATCTTCAAAACNATTCA------TACT---TTTATTCAC-GTCTTGAAA--AT-GAG-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAA-A--C----AA---A--CA---T-G--CGG-A--TTTTCGGGAAA--TT----GAGCACTN--GCTCTTTTTAAGGAACT-A-C--AAA-ATTCAT-GCG-CTCAGTAAATTACGAAAA-TTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCGTNATGTTTTAT--TTAATAATTTCGGCACGAGAAGA-TA---AAGGTTTTTAACT--CA-TCAAACTTAAATNATTCGGAANTGG--A--ACTATGNATGGTTCTTCAGNTGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACNCTAGAATGGTGACCTTANCACAAGGANCATTTTGTGAGATATCTAAAAAAGTAAAAAGTTCAAATCAATTGTTGNNATTGGGAAAAATGGTTTCGAACACGTAAACGTAG-AGATGATATTCCAG--TCT-AAAAATAC---CCTATTCGGAACTTAGCCAAA--GGACTGTACGTTTGAGT
gi|1 : TTTGGCTAAGTTCCGAATAGGTTATTTTT-AGACTGGAATATCAT--CTT-C-TACGTTTACG-T-GTTTGAAATCATTTTTCCCAATTCCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTTTTTAAATA-TCTCACAAAATGTTC-TTTG-------TACTAAGTCACCATTCTAGAGTTT-CTATGATGACCGAA-AAAAGACGCCCCAT-TT-TGGTGAGCCTTGCCATCGATTTTACCAGTTTCCGAA------TAGCCC----------------------A-TATTCAAA---GGGGTAGAAAATGCAATCTAAAAGAAGAATAAAAAT----TTGAATTG-AAATAA-AA-AATATAGAGAC-TTGATCTTTCCTC--T--G-A--GA-CC-A-TC-C-CAT-AGTTTATG----TAG-TCTATAGAACCATTCA------TACT---TTTCTTCAC-GTCTTGAAA--TT-GAG-GAGTCT-------TTCCGA--TTTT-----T--T-----CAAATA-A--C----AA---A--CA---T-G--CGG-A--TTTTCGGCAAAATTT----AAACACTC--GTTCTTTTTAAGGAGCT-A-TCAAAA-ATTCATCGCG-CTCAGTAAATAACAAAAAATTGAAGAATTATTTAGCAGATGAAAGATTAAAGTTTATTATCATAATGTTTTATATTCAATAATTTTGCCACGAAAAGA-TA---AAAGTTTTTAACT--CA-TTAAACTTAA-TTATTCGGAACTGG--A--ACTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACTCTAGAATGGTGA-CTTAGTACAAAGAACATTTTGTGAGATATTTAAAAAAGTAAAAAGTTCAAATTAATTGTTGGAATTGGGAAAAATGATTTCAAACACGTAAACGTAGAAGATGATATTCCAG--TCT-AAAAATAA---CCTATTCGGAACTTAGCCAAAACGGACTGTACGTTTAAGT
gi|10 : tACCATTTT-AACATTACCA--A-------CA---T---TA--TT--TGAA-CTT-TTT-A-----TTTAAATA-TCTCAAGAAATATTTCTTCG-------TAA-AAGTCACGAT-CTAATGTT--CTAGGACGAC--GTTAAAAGACATCT-AT-ATATGA---GCCTTAGATTCAATTGTACCAGTT-CCGAA------TATCCC----------------------C-TAATCCTA---GAGTTA------------TAAT-GAAGAATAAAA-T----TAGGATTG-AAATG-----GC-------------ATCTTTCATC--T--GCA--GAATC-A--T-G-CAT-AATTTATG----CAAATCTTATAAACCATTCA------TATT---ATTAT-CAG-ATCTTGAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--T-----CAT-AA-A--C----AA---G--TA---T-GA-TGG-A--TTTTCGGCAAA--TT----GAGCACTA--CATCTTTTTAAGGAACTAA-C--AAA-ACTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAAC--GTGAGAAATTAAAGTTTATTATCATGGCGTTTTAT--TTAATAATTTCGatatttcaaagaatgaaatttatttctgaaa
gi|11 : atGATACCATTTTACC--ATACCA--A-------CA---T---TA--TT--TGAA-CTT-TTT-A----TTTTAAATA-TCTCAAGAAATAGTTCTTCG-------TAA-AAGTCACGAT-CTAATGTTT-CTAGGACGAC--GTTAAAAGACATCT-ATATT-TGA---GCCTTA-GATCAATTGTACCAGTT-CCGAA------TATCCC----------------------C-TAATCCTA---GAGTTA------------TAAT-GAAGAATAAAA-T----TAGGATTG-AAATG-----GC-------------ATCTTTCATC--T--GCA--GAATC-A--T-G-CAT-AATTTATG----CAAATCTT-AAAACCATTCA------TA------TTATTCAG-ATCT-GAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--T-----CATAAA-A--C----AA---G--TA---T-GA-TGG-A--TTTTCGGCAAA--TT----GAGCACTA--CATCTTTTTAAGGAA---A-C--AAA-ACTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAACACGTGGAGAATTAAAGTTTATTATCATGGCGTTTTAT--TTAATAATTTCG
gi|12 : -TACGTT-ACG-T-ATTTAAAACCATTTTGT---ATACCACAA-------TA-G-T---AA-ATTATTAAA-CAT-TT--A-CTTT----------------AAATATCT-TACA--------AA-A-----------TAATTTTT-------------GC-AAAGGCCGCCT--T-TT-TTGTG--CTTTACAA-CGATTTCCCCAGTT-C-GAT------TAACCT----------------------C-TACTCACA---GGGGTAGAAAATGCA-TCTAAA-GGAGAATGAAC-T----TTGGATTG-AAAAAA-AA-------------TTGATCTTTCATC--T--G-AAGAA-TC-A-A--G-CAT-AATCTGGG----TAGATCTTCAGAACAATTCA------TAC----TTTATTTAC-GT-TTGAAA--AA-TAA-GGTGCT-------GCTCGA--TTTA-----T---------AG-------------------------T-GA-CGA-A---TTCCGGAAAA--TT----AAGCACTC--A-TCTTTTCA--GGATA-A-C--AAA-CTTC-T-GCG-CTCAATAAATTATGACAA-T----AACTTATTCAATAGATG
gi|13 : tAATAAAA-T----TTGAATTG-AAATAA-GA-GTT-CAGAAAT-TTGATCTTTCATC--T--G-AA-GA-TT-C-AT-G-CAT-AATTTAGG----TAGATCCATAAAACACTCCA------TACT---TT-ATTTAC-GTCTTGAAA--AT-AAG-GGGTCT-------TTCCCA--TTTA-----T--T-----CATAAA-A--C----AA---A--CA---TTG--CGG-A--TTTTCGGGAAA--TTTTA-AAGCACTCTCGCTTTTTTTA-GGA--T-T-C--AAGGATTCAT-GCG-CTCAGTAAATTATGAAAA-TTGTAGAATTGTTTAACATATGAAGGATCAGAGTATATT---GTGATGTTTTAT--TTAATAATTTC-GCACAAGAAGA-TAAATAAAGTTTTC-ACT--CC-TCAAAATTAAATTATTCGGAGCTGGAAA--ACTATttcatagtatcaagtaaggagtcttttttatgcagaaatcttgcaacaagga
gi|14 : -GCTTTACAA-AGATTTCATCAATT-TCGAA------TAGCCCACAAATAATCAATCAATCAACCC-TATTCACACAGGGGAAAAAAAATGCA-TCTAAA-GAAGAATGAAA-T----TTGGATTG-AAATAA-AA-GTT-CAAAAAT-TTGATCTTTCATC--T--G-AAGAA-TC-A-A--G-CATAAATTTAGG----TAGATTT------CTGTTCA------T-CC---TTTATTTAC-GTCTTAAAA--AT-GCA-GGGGCT-------TTCCGATTTTTT-----T--T-----TAGAAA-A--C----AA---A--CA---TGG--CGG-A--CATTCAGGAAA--TT----ATGCA----------TTTTGAGAAGCT------AAC-ACTCAT-tcggagcttggaaaac
gi|15 : gtGGTAGAAAATGCA-TCGAAA-GGAAAATAAAC-T----TTGGAGTG-AAATAA-AA-GTT-TTGAGATGTTGGTCTTTCATC--T--GAA--GATTC-A-A--G-CAT-AATTTAGG----CAGATATTTAAAACAGTTCA------TAC----TTTATTCA---TATTGAAATGATCGAG-GGGGCT-------TCCCAA---TTT-----T--C-----CAGAAA-A--C----AA---A--CA---TGG--TGG-A--TTTTCGGAAAA--TTTTTAAAGCACTC--GATCcaaccttaaatta
gi|16 : CCTA-GTTCCGAATAGGGTATTTTT-AGACTGGGGTATCAT--CT--C-TACGTT-ACA-T-GTTTGAAACCATTTGTCC--ATACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTT---AAGTA-TGTCACAAACTAGTT-TTTGAAAATTTTAA-AAGTCGCCAT-CTAGTGTTT-CTATGACGAC--AA-ATAAGACACCT-AT-TT-TCGT--GCCTTAC-ATCGAGTTTACCAGTT-CCGAA------TAGCTC----------------------acctaaattattcgagactggaaaactattccg
gi|17 : aTT-CCGAA------TAGCCTGGT-------------------C-TATTCA---------TAGAAAACGCA-TCTACA-TAAGAATGGAC-C----TTGGACTG-AAATTA-AA-GTT-TTGAAAT-TTGATCTTCCATC--T--G-AAGAA-TC-A-A--G-CAT-AATTTAGGTATATAGATCTTCAAAGCAGTTCATTATAGTACTTAATTTAGTAAT-GTCTTGAAA--AT-AAATGGGGCTCCCAAGCTTCTTT--TTTT-----T--T-----TGGAAA-A--t
gi|18 : atcttacaatgctGGTATTTTG-GGATTGATATATTATCTCTA-C--A---TTACG-T-GTTTGAAACCATTTTCCC--ATACCA--A-------CA-A-C------------------------A-CATTTTT---------CACAAAAT-GTT-TTC---------AA-AGGTCACCAT-TTA----CT-TTATGACAAC--GA-TAAATTCACCT-AT-TT-TTGCG-G-CTTACAA-CGA-TTTACCAGTT-CCGAA------AAGACC----------------------C-T
gi|19 : agtcgatatgtacatGAAACACTAGA-TGGTGACTTT-CCACAAGAACTATTTTGTGAGATATCTAAA---GTAAAAAGTTCAAATCAATTGTTGCTAT--GGAAAAATGGTTTCAAACATGTAA-CATAG-AGATGATATCCCAG--TCT-AAAAACAC---CCTATTCGGAAC-TAGCCAAA--TGACTGTAta
gi|2 : AAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACA-TTATCTATTACC-TTTTTC---ACATCA--A-------TA-A-TA--TATAGT--TAAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-TG-TG--TCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGTGGAATATGCA-TTT----GAAGAATAAAA-T----TTGGATTG-AAATAA-AA-GCT-TAGAAAT-GTGATCGTTCATC--TTTA-A--AA-TC-AAGC-GGCAT-AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-AC-GACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTT-----T--TTTCTTCAGAAT-A--CTCAAAATTCA--CA---TTG--TGG-A--TTTTCGGGAAA--TT----GAGCATTA--GCCCTTTT-AAGGAACT-A--------ATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAGAATTGTTTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TTGATA---TTGGCACGGGAAGA-TA---AAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGG--AAGACTATa
gi|20 : ttttc-A-C--AAA-ATTCAT-GCG-CTCAGTAATTTACGAAAA-TTGAAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCATGATGTTTTAT--TCAATAATTTT-GCACGAGATAA-TA---AAG--TTTTCACT--CA-CTAAACTTAAATCAtctaaactagaaaaactactgta
gi|21 : a-GCCTTACA-TCGATTTTACCAGTT-CCGAA------CAGCTC----------------------C-TATTCACA---GGGGCAGAAAATGCA-TCTAGA--AAGA--AGAA-T----TTCAACTG-AAAagacaaatgactatattccgga
gi|22 : gtCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTACAAACTGCA-CCTAAA-GAAGAATAAAA-TAAAATT---TTG-AAATAA-AA-TC--TAGAAAT-TTGATCTTTCAaatcatgcataattttagatatgtagatcta
gi|23 : AATTGGTATGGAACA---GAACGTGG--GATGATATTCCAGATTCTAAAAAAAACGCGCCTATCCGAAAC-TAGCCA-----GACTGatataaaatggcgaagtaacaa
gi|25 : atgcagtattgtaatTTT-CTATGACGAC--GA-AAAAGACACCT-AT-CT-TTGT--GCCTTAC-GTTGATTTTATCAGTT-CCGAATACCGGTAGCCC----------------------C-AATTCAC
gi|27 : TTACA-C-GTTTGAAACCATTTTCCC--ATACCA--A-------CA-A-T---ga
gi|28 : ACA-T-GTTTAAAATCTTTTTTTTAAA---CA--G-------CA-A-T---AA-ATT--TGAA-CTT-TTTGA-----TTTAAATA-TATAACAAAATATTT-TTatacccttagatcttgaaaatagtatttgaactagaaaat
gi|29 : GTAAA-GTAG-AGAT-----------------AAAATAC---CCTATTCGGAAC-TAGGCAAA--GGACTGTAC-TTTGAAT
gi|3 : taagcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACATT-ATCTATTACC-TTTTTCAC-ATATCA--A-------TATA-TA--TA-G-T--TAAA-TTTGTTT-G-C---TTTAAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-T-GT--GTCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGT-GGAATTGCA-TTT----GAAGAATAAAA-T----TTGGATTG-AAATAA-AA-GCT-TAGAAAT-GTGATCGTTCATCTTT--A-A--AA-TCAA-GCGG-CA--AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-AC-GACTTGAAA--AT-GA--GGGGCT-------TTTCGA--TTTTTTTTCT--T-----CAGAAT-ACTC----AA---ATTCACATT-G--TGG-ATTTTTTCGGGAAA--TT----GAGCATTA--GC-CCTTTTAAGGAACT--------A-ATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAAGATTGTTTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TT-GTA---TTGGCACGGGAAGA-TA---AAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGG--AAGACTATa
gi|4 : tcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACA-TTATCTATTACC-TTTTTCACA-TATCA--A-------TATA-TA--TA-GTT---AAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-T-GT--GTCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGT-GGAATTGCA-TTT----GAAGAATAAAA-T----TTGGATTG-AAATAA-AAGGCT-TAGAAAT-GTGATCGTTCATCTTT--A-A--AA-TCAA-GCGG-CA--AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-AC-GACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTTTTTTCT--T-----CAGAAT-ACTC----AA---ATTCACATT-G--TGGTT--TTTTCGGGAAA--TT----GAGCATTA--GC-CCTTTTAAGGAACT--------A-ATTCAT-GCA-CTCAGTAAATTATG-AAA-TTGTAAGATTG-TTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TT-GTA---TTGGCACGGGAAGA-TA---AAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGG--AAGACTATtctaaactagaaaaactac
gi|5 : tcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACA-TTATCTATTACC-TTTTTCACA-TATCA--A-------TATA-TA--TA-GTT---AAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-TG-TG--TCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGTGGAAT-TGCA-TTT----GAAGAATAAAA-T----TTGGATTG-AAATAA-AA-GCT-TAGAAAT-GTGATCGTTCATCTTT--A-A--AA-TCAA-GCGG-CA--AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-AC-GACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTTTTTTCT--T-----CAGAAT-ACTC----AA---ATTCACATT-G--TGGTT--TTTTCGGGAAA--TT----GAGCATTA--GC-CCTTTTAAGGAACT--------A-ATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAAGATTG-TTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TT-GTA---TTGGCACGGGAAGA-TA---AAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGG--AAGACTATtctaaactagaaaaactac
gi|6 : tcTTTGCCTA-GTTCCGAATAGGGTATTTTTTAGACTGGGATAT-AT-TCTA-CATA-----ACA-T-GTTTGAAACCATTTTCC---ATACAA--AAAAAAAACA-AATGAATA-ATT--TGAATCTTGTTT-AACTTT---AAATAGTATCAC-AAATAGTT-CT-G-------TAA-AAATCACCATGCTAGTTTTTTCTAAGATGGC--GA-AAAAGACAC-T-AT-TT-TGGCT-GCCTTGCAA-CGATTTTACCAGTT-CCGAT------CAGCCC----------------------CCTGTTCACA---GG---AGAAAATGCA-TCTAAA--AAGTATAAA--T----TTGGATTGAAAATAATAA---T-TAGAAAT-TTGATCTTTCATC--T--GAA--GA-AT-A--T-G-CAT-AATTTATG----TGGATCTATAAAGACATTCA------TAC----TTTGTTCACGGTCTTGAAA--TT-GAA-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAATA--C----AA---A--CA---T-G--GCG-T--TTTTC-GGCAA--TT----AAGC-CTC---CTCTTTTC-AGGAGCT-G-C--ATA-ATTC-T-GCGTCTCAGTAAATTAAGAAAT-TTGAAGAA-TA-TTAACTGACGAA-GATTAAAATTCATTCTCACTATGTTTTAT--CTAATAATTTTGCAATGA-AAGATTA---AAAGTTTTTAACTACCA-TTAAACTTAA--TATTCGGAACTGG--A--Atctaaactagaaaaactac
gi|7 : gTTGTCTA-GTTCCGAATAGGGTATTTTT-AGACTGGGATATCAT--CT--C-TACGTT-ACG-T-GTTTGAAACCATTTTCCC--ATTTCA--A-------CA-A-T---TA-ATT--TGAA-CAT-TTT-A-CTTT---AAATA-TCTCACAAAATAGTT-CTTG-------TAT-AAGTCACCAT-CTAGAGTTT-CTATGGCGAC--GA-AAAAGATGCTC-AT-TT-CTGTG--CTTTGCA-TCGATTTTACCAGTA-CCGAA------TAGTCC----------------------C-TATTCACT---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGAATTG-AAATAA-AA-GTT-TAGAAAT-TCGATCTTTCATC--T--G-AAGAA-TC---GT-G-CAT-AATTTATG----TAGATCTATAGAACCATTCA------TACT---TTC-TTCAC-GTCTTGAAA--AC-GAG-GAGTCT-------TTCCGA--TTTT-----T--T-----CTTAAA-A--T----AA---A--CA---TGG--CGG-A--TTTTCGGCAAA--TT----AAGCACTC--CCTCTTTTTAAGGAGCT-ATT--AAA-ATTCAA-GCG-CTCAGTAAATAACGAAAA-TTGAAGAATTATTCAACAGATGAAGGATTAAAGTTTATTA---TAATGTTTTAT--TTAATAATTTC-GCACCAAAAAA-TA---AAG--TTTTCACT--CA-TTAAACTTAAATTATTCGGAACTGGAAA--ACTATaaacttattccgaac
gi|8 : TTTCCCTAGCTCCCGAATAGGGTATTTTC-AGACAGGATTATTAC--CGAGC-TACGTTC-TG-T-GTTGGAAACCATTTTTCC--ATACCA--A-------CA-A-A---AT-ATT--TCAA-CTT-TTT----TTCTTTAAATA-TCTCACGAAATAATT-TTCG-------CAA-AGGTCAACAC-CTAGTCTTT-CTATGACGAC--AA-AAAAG-CCCC----------GTG-A-CGTGCAA-CAATTTC-CCAGTT-CTGGA------CATCCT----------------------C-TATTCACA---GGCGTAGAAAATGAC-TCAAAA-TGAGAATAAAC-T----TTGTA-TG-AAATAA-AA-GTT-TTGAGAT-TTGATCTTTCATC--T--G-AAGAA-TC-A-A--G-CAT-AATTTAGG----TATATCTTCAAAACAGTTCA------TAC----TTTATTTAC-GTCTCGAAA--AT-GAG-GTGGCT-------TCCTTA--TTTTA----TAAT-----CAGAAA-A--C----AA---G--CC---T-GGCCGG----TTTTTGGAATA--TT----AAGCAATC--CATCTTTTCAAAGAGCTGA-A--AAA-ATTCAT-GCT-CTGAGTAAATTATGAAAA-TTGTAGAATTATTTAACAGATA--------------ATCATAATAATATTTTAC--TTAA----TTC-GTACGAAAAGA-TA---AAG--TTTTCACT--CATTTAAACTTTAATTATTCGGAATTGG--A--Atcggaactaggcaa
gi|9 : ACCATTTT-AACATTACCA--A-------CA---T---TA--TT--TGAA-CTT-TTT-A-----TTTAAATA-TCTCAAGAAATATTTCTTCG-------TAA-AAGTCACGAT-CTAATGTT--CTAGGACGAC--GTTAAAAGACATCT-AT-ATATGA---GCCTTAGATTCAATTGTACCAGTT-CCGAA------TATCCC----------------------C-TAATCCTA---GAGTTA------------TAAT-GAAGAATAAAA-T----TAGGATTG-AAATG-----GC-------------ATCTTTCATC--T--GCA--GAATC-A--T-G-CAT-AATTTATG----CAAATCTTATAAACCATTCA------TATT---ATTAT-CAG-ATCTTGAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--T-----CAT-AA-A--C----AA---G--TA---T-GA-TGG-A--TTTTCGGCAAA--TT----GAGCACTA--CATCTTTTTAAGGAACTAA-C--AAA-ACTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAAC-GGTGAGAAATTAAAGTTTATTATCATGGCGTTTTAT--TTAATAATTTCGaacaattcggaacaaagaa
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): ATTTAGTTTCGGACATGAAAGAAGACTTAAGCTCTACTTTTCTATTTTCCTCCTATTCATATCACCCATCCTCTTTTCTTTCTCCTTTT
Unaligned ( gi|26 ): AAAACAAACTTTATTCAACATGTATAACATTTAAAGAATGCCAAAGGTGAACGAATATTCCAGGCGACGTGACGTATGATACTG
Unaligned ( gi|30 ): CAGTATTGTTTAAATTGGAGGAAAATGTGTTTTCTGGTTTTCATTTTTACCTATTATTTGA
Unaligned ( gi|31 ): TTACATAATATATTGCTAAGCGGATGGCACAATTTATTCATGAAA
Alignments
lowQualScore : 1 11 3333 22222222222 1 2222222222 11111111 222222 11 2222222222222222222222 111 333333 1111 11111111111111 222222222222222222 1111 1111 222222 1 1 11 222 11 1 11 11 22222 1 11111 1
lowQualScore : 9 2 1 4 1 0 88 7777 88 6 3 9 0 4 4 1111 33 8888888 00000000000 666 2 3 6666666666 2 0 4 1 8 88888888 2 1 0 5 2 2 33 8 2 2 5 444444 77 2 666666 2222222222222222222222 2 444 1 66 2 5555 2 4444 2 2 8888 1 33 5 5 333 222222 5 22 1 5555 33 1 777777 0000 1 8 2 33 2 2 0 8888888 33 66666666666666 0 2 66 999 444444444444444444 2 66 1 33 0000 33 1111 1 333333 2 2 2 2 2 11 1 44 0 88 5 8888 55 99 0 666 4 0 1 1 1 2 1 5 5 66 1 111 22 88 0 2 55 33 2 0 33 1 33333 0 66666 5
lowQualScore : . . . . . . .. .... .. . . . . . . .... .. ....... ........... ... . . .......... . . . . . ........ . . . . . . .. . . . . ...... .. . ...... ...................... . ... . .. . .... . .... . . .... . .. . . ... ...... . .. . .... .. . ...... .... . . . .. . . . ....... .. .............. . . .. ... .................. . .. . .. .... .. .... . ...... . . . . . .. . .. . .. . .... .. .. . ... . . . . . . . . . .. . ... .. .. . . .. .. . . .. . ..... . ..... .
lowQualScore : 0 8 1 0 0 4 55 4444 55 5 1 2 3 9 0 1111 44 1111111 99999999999 111 7 3 7777777777 7 6 6 0 0 33333333 9 6 7 7 0 7 77 0 7 7 3 000000 66 1 111111 4444444444444444444444 2 444 2 66 4 1111 2 7777 2 4 7777 2 22 0 0 555 222222 0 77 0 3333 44 0 222222 1111 5 1 5 44 5 5 8 1111111 44 99999999999999 2 5 99 333 222222222222222222 7 33 5 77 3333 77 9999 2 333333 7 7 9 9 0 22 0 22 8 22 4 5555 55 55 6 111 0 8 0 1 0 7 0 5 0 55 0 555 00 00 7 0 88 22 5 8 88 2 88888 0 55555 0
consensus : NTTTGCCTAAGTTCCGAATAGGGTATTTTT-AGACNGGAATATTATATCTA-C-TACGTTTACG-T-GTTTGAAACCATTTTTCCCAATACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTTTTTAAATA-TCTCACGAAATANTT-TTCG-------TAA-AGGTCACCAT-CTAGTNTTT-CTATGACGAC--GA-AAAAGACGCCT-AT-TT-TGGTG-GCCTTACAATCGATTTTACCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAG-CT-TAGAAAT-TTGATCTTTCATC-TG-AAG-A-TC-A-GC-G-CAT-AATTTANG----TAGATCTTCAAAACNATTCA------TACT---TTTATTCACG-TCTTGAAA--AT-GAG-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAA-A--C---AA---A---CA---T-G--CGG-ATTTT--CGGGAAA--TT----GAGCA--CTNGCTCTTTTTAAGGAACT-A-C--AA-AATTCAT-GCG-CTCAGTAAATTACGAAAA-TTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCGTNATGTTTTAT--TTAATAATTTCGGCACGAGAAG----AT--AAAG--TTTTAACT--CA-TCAAACTTAAATNATTCGGAANTGGAAGACTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACNCTAGAATGGTGACCTTANCACAAGGANCATTTTGTGAGATATCTAAAAAAGTAAAAAGTTCAAATCAATTGTTGNNATTGGGAAAAATGGTTTCGAACACGTAAACGTAG-AGATGATATTCCAG--TCTAAAAATA---C-CCTATTCGGAAC-TAGCCAAA--GGACTGTACGTTTGAGT
Reference ( family-3174 ) : NTTTGCCTAAGTTCCGAATAGGGTATTTTT-AGACNGGAATATTATATCTA-C-TACGTTTACG-T-GTTTGAAACCATTTTTCCCAATACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTTTTTAAATA-TCTCACGAAATANTT-TTCG-------TAA-AGGTCACCAT-CTAGTNTTT-CTATGACGAC--GA-AAAAGACGCCT-AT-TT-TGGTG-GCCTTACAATCGATTTTACCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAG-CT-TAGAAAT-TTGATCTTTCATC-TG-AAG-A-TC-A-GC-G-CAT-AATTTANG----TAGATCTTCAAAACNATTCA------TACT---TTTATTCACG-TCTTGAAA--AT-GAG-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAA-A--C---AA---A---CA---T-G--CGG-ATTTT--CGGGAAA--TT----GAGCA--CTNGCTCTTTTTAAGGAACT-A-C--AA-AATTCAT-GCG-CTCAGTAAATTACGAAAA-TTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCGTNATGTTTTAT--TTAATAATTTCGGCACGAGAAG----AT--AAAG--TTTTAACT--CA-TCAAACTTAAATNATTCGGAANTGGAAGACTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACNCTAGAATGGTGACCTTANCACAAGGANCATTTTGTGAGATATCTAAAAAAGTAAAAAGTTCAAATCAATTGTTGNNATTGGGAAAAATGGTTTCGAACACGTAAACGTAG-AGATGATATTCCAG--TCTAAAAATA---C-CCTATTCGGAAC-TAGCCAAA--GGACTGTACGTTTGAGT
gi|1 : TTTGGCTAAGTTCCGAATAGGTTATTTTT-AGACTGGAATATCAT--CTT-C-TACGTTTACG-T-GTTTGAAATCATTTTTCCCAATTCCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTTTTTAAATA-TCTCACAAAATGTTC-TTTG-------TACTAAGTCACCATTCTAGAGTTT-CTATGATGACCGAA-AAAAGACGCCCCAT-TT-TGGTGAGCCTTGCCATCGATTTTACCAGTTTCCGAA------TAGCCC----------------------A-TATTCAAA---GGGGTAGAAAATGCAATCTAAAAGAAGAATAAAAAT----TTGAATTGAAA-TAA-AAA-ATATAGAGAC-TTGATCTTTCCTC-TG-A-G-A-CC-A-TC-C-CAT-AGTTTATG----TAG-TCTATAGAACCATTCA------TACT---TTTCTTCACG-TCTTGAAA--TT-GAG-GAGTCT-------TTCCGA--TTTT-----T--T-----CAAATA-A--C---AA---A---CA---T-G--CGG-ATTTT--CGGCAAAATTT----AAACA--CTCGTTCTTTTTAAGGAGCT-A-TCAAA-AATTCATCGCG-CTCAGTAAATAACAAAAAATTGAAGAATTATTTAGCAGATGAAAGATTAAAGTTTATTATCATAATGTTTTATATTCAATAATTTTGCCACGAAAAG----AT--AAAAGTTTTTAACT--CA-TTAAACTTAA-TTATTCGGAACTGGAA--CTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACTCTAGAATGGTGA-CTTAGTACAAAGAACATTTTGTGAGATATTTAAAAAAGTAAAAAGTTCAAATTAATTGTTGGAATTGGGAAAAATGATTTCAAACACGTAAACGTAGAAGATGATATTCCAG--TCTAAAAATA---A-CCTATTCGGAACTTAGCCAAAACGGACTGTACGTTTAAGT
gi|10 : tACCATTTT-AACATTACCA--A-------CA---T---TA--TT--TGAA-CTT-TTT-A-----TTTAAATA-TCTCAAGAAATATTTCTTCG-------TAA-AAGTCACGAT-CTAATGTT--CTAGGACGAC--GTTAAAAGACATCT-AT-ATATGA---GCCTTAGATTCAATTGTACCAGTT-CCGAA------TATCCC----------------------C-TAATCCTA---GAGTTA------------TAAT-GAAGAATAAAA-T----TAGGATTGAAA-TG----G-C-------------ATCTTTCATC-TG-CAG-AATC-A--T-G-CAT-AATTTATG----CAAATCTTATAAACCATTCA------TATT---ATTAT-CAGA-TCTTGAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--T-----CAT-AA-A--C---AA---G---TA---T-GA-TGG-ATTTT--CGGCAAA--TT----GAGCA--CTACATCTTTTTAAGGAACTAA-C--AA-AACTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAAC--GTGAGAAATTAAAGTTTATTATCATGGCGTTTTAT--TTAATAATTTCGatatttcaaagaatgaaatttatttctgaaa
gi|11 : atGATACCATTTTACC--ATACCA--A-------CA---T---TA--TT--TGAA-CTT-TTT-A----TTTTAAATA-TCTCAAGAAATAGTTCTTCG-------TAA-AAGTCACGAT-CTAATGTTT-CTAGGACGAC--GTTAAAAGACATCT-ATATT-TGA---GCCTTA-GATCAATTGTACCAGTT-CCGAA------TATCCC----------------------C-TAATCCTA---GAGTTA------------TAAT-GAAGAATAAAA-T----TAGGATTGAAA-TG----G-C-------------ATCTTTCATC-TG-CAG-AATC-A--T-G-CAT-AATTTATG----CAAATCTT-AAAACCATTCA------TA------TTATTCAGA-TCT-GAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--T-----CATAAA-A--C---AA---G---TA---T-GA-TGG-ATTTT--CGGCAAA--TT----GAGCA--CTACATCTTTTTAAGGAA---A-C--AA-AACTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAACACGTGGAGAATTAAAGTTTATTATCATGGCGTTTTAT--TTAATAATTTCG
gi|12 : -TACGTT-ACG-T-ATTTAAAACCATTTTGT---ATACCACAA-------TA-G-T---AA-ATTATTAAA-CAT-TT--A-CTTT----------------AAATATCT-TACA--------AA-A-----------TAATTTTT-------------GC-AAAGGCCGCCT--T-TT-TTGTG--CTTTACAA-CGATTTCCCCAGTT-C-GAT------TAACCT----------------------C-TACTCACA---GGGGTAGAAAATGCA-TCTAAA-GGAGAATGAAC-T----TTGGATTGAAA-AAA-AA-------------TTGATCTTTCATC-TG-AAGAA-TC-A-A--G-CAT-AATCTGGG----TAGATCTTCAGAACAATTCA------TAC----TTTATTTACG-T-TTGAAA--AA-TAA-GGTGCT-------GCTCGA--TTTA-----T---------AG-------------------------T-GA-CGA-A-TTC--CGGAAAA--TT----AAGCA--CTCA-TCTTTTCA--GGATA-A-C--AA-ACTTC-T-GCG-CTCAATAAATTATGACAA-T----AACTTATTCAATAGATG
gi|13 : tAATAAAA-T----TTGAATTGAAA-TAA-GAG-TT-CAGAAAT-TTGATCTTTCATC-TG-AAG-A-TT-C-AT-G-CAT-AATTTAGG----TAGATCCATAAAACACTCCA------TAC----TTTATTTACG-TCTTGAAA--AT-AAG-GGGTCT-------TTCCCA--TTTA-----T--T-----CATAAA-A--C---AA---A---CAT--T-G--CGG-ATTTT--CGGGAAA--TTTTA-AAGCACTCTCGCTTTTTTT-AGGA--T-T-C--AAGGATTCAT-GCG-CTCAGTAAATTATGAAAA-TTGTAGAATTGTTTAACATATGAAGGATCAGAGTATATT---GTGATGTTTTAT--TTAATAATTTC-GCACAAGAAGATAAAT--AAAG--TTTTCACT--CC-TCAAAATTAAATTATTCGGAGCTGGAAAACTATttcatagtatcaagtaaggagtcttttttatgcagaaatcttgcaacaagga
gi|14 : -GCTTTACAA-AGATTTCATCAATT-TCGAA------TAGCCCACAAATAATCAATCAATCAACCC-TATTCACACAGGGGAAAAAAAATGCA-TCTAAA-GAAGAATGAAA-T----TTGGATTGAAA-TAA-AAG-TT-CAAAAAT-TTGATCTTTCATC-TG-AAGAA-TC-A-A--G-CATAAATTTAGG----TAGATTT------CTGTTCA------T-CC---TTTATTTACG-TCTTAAAA--AT-GCA-GGGGCT-------TTCCGATTTTTT-----T--T-----TAGAAA-A--C---AA---A---CA---TGG--CGG-ACATT--CAGGAAA--TT----ATGCA----------TTTTGAGAAGCT------AA-CACTCAT-tcggagcttggaaaac
gi|15 : gtGGTAGAAAATGCA-TCGAAA-GGAAAATAAAC-T----TTGGAGTGAAA-TAA-AAG-TT-TTGAGATGTTGGTCTTTCATC-TG-AAG-ATTC-A-A--G-CAT-AATTTAGG----CAGATATTTAAAACAGTTCA------TAC----TTTATTCA---TATTGAAATGATCGAG-GGGGCT-------TCCCAA---TTT-----T--C-----CAGAAA-A--C---AA---A---CA---TGG--TGG-ATTTT--CGGAAAA--TTTTTAAAGCA--CTCGATCcaaccttaaatta
gi|16 : CCTA-GTTCCGAATAGGGTATTTTT-AGACTGGGGTATCAT--CT--C-TACGTT-ACA-T-GTTTGAAACCATTTGTCC--ATACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTT---AAGTA-TGTCACAAACTAGTT-TTTGAAAATTTTAA-AAGTCGCCAT-CTAGTGTTT-CTATGACGAC--AA-ATAAGACACCT-AT-TT-TCGT--GCCTTAC-ATCGAGTTTACCAGTT-CCGAA------TAGCTC----------------------acctaaattattcgagactggaaaactattccg
gi|17 : aTT-CCGAA------TAGCCTGGT-------------------C-TATTCA---------TAGAAAACGCA-TCTACA-TAAGAATGGAC-C----TTGGACTGAAA-TTA-AAG-TT-TTGAAAT-TTGATCTTCCATC-TG-AAGAA-TC-A-A--G-CAT-AATTTAGGTATATAGATCTTCAAAGCAGTTCATTATAGTACTTAATTTAGTAATG-TCTTGAAA--AT-AAATGGGGCTCCCAAGCTTCTTT--TTTT-----T--T-----TGGAAA-A--t
gi|18 : atcttacaatgctGGTATTTTG-GGATTGATATATTATCTCTA-C--A---TTACG-T-GTTTGAAACCATTTTCCC--ATACCA--A-------CA-A-C------------------------A-CATTTTT---------CACAAAAT-GTT-TTC---------AA-AGGTCACCAT-TTA----CT-TTATGACAAC--GA-TAAATTCACCT-AT-TT-TTGCG-G-CTTACAA-CGA-TTTACCAGTT-CCGAA------AAGACC----------------------C-T
gi|19 : agtcgatatgtacatGAAACACTAGA-TGGTGACTTT-CCACAAGAACTATTTTGTGAGATATCTAAA---GTAAAAAGTTCAAATCAATTGTTGCTAT--GGAAAAATGGTTTCAAACATGTAA-CATAG-AGATGATATCCCAG--TCTAAAAACA---C-CCTATTCGGAAC-TAGCCAAA--TGACTGTAta
gi|2 : AAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACATT-ATCTATTACC-TTTTTC---ACATCA--A-------TA-A-TA--TATAGT--TAAA-TTTGTTT-G-C---TTTAAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-T-GT--GTCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGTGGAATATGCA-TTT----GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAG-CT-TAGAAAT-GTGATCGTTCATCTTT-AAA-A-TCAA-GCGG-CAT-AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-ACG-ACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTTTTTTCT--T-----CAGAAT-ACTC---AA---AATTCACATT-G--TGG-ATTTT--CGGGAAA--TT----GAGCA--TTAGC-CCTTTTAAGGAACT---------AATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAGAATTGTTTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TTGATA---TTGGCACGGGAAG----AT--AAAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAGACTATa
gi|20 : ttttc-A-C--AA-AATTCAT-GCG-CTCAGTAATTTACGAAAA-TTGAAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCATGATGTTTTAT--TCAATAATTTT-GCACGAGATA----AT--AAAG--TTTTCACT--CA-CTAAACTTAAATCAtctaaactagaaaaactactgta
gi|21 : a-GCCTTACA-TCGATTTTACCAGTT-CCGAA------CAGCTC----------------------C-TATTCACA---GGGGCAGAAAATGCA-TCTAGA--AAGA--AGAA-T----TTCAACTGAAA-agacaaatgactatattccgga
gi|22 : gtCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTACAAACTGCA-CCTAAA-GAAGAATAAAA-TAAAATT---TTGAAA-TAA-AAT-C--TAGAAAT-TTGATCTTTCAaatcatgcataattttagatatgtagatcta
gi|23 : AATTGGTATGGAACA---GAACGTGG--GATGATATTCCAGATTCTAAAAAAAACGCGCCTATCCGAAAC-TAGCCA-----GACTGatataaaatggcgaagtaacaa
gi|25 : atgcagtattgtaatTTT-CTATGACGAC--GA-AAAAGACACCT-AT-CT-TTGT--GCCTTAC-GTTGATTTTATCAGTT-CCGAATACCGGTAGCCC----------------------C-AATTCAC
gi|27 : TTACA-C-GTTTGAAACCATTTTCCC--ATACCA--A-------CA-A-T---ga
gi|28 : ACA-T-GTTTAAAATCTTTTTTTTAAA---CA--G-------CA-A-T---AA-ATT--TGAA-CTT-TTTGA-----TTTAAATA-TATAACAAAATATTT-TTatacccttagatcttgaaaatagtatttgaactagaaaat
gi|29 : GTAAA-GTAG-AGAT----------------AAAATA---C-CCTATTCGGAAC-TAGGCAAA--GGACTGTAC-TTTGAAT
gi|3 : taagcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACA-TTATCTATTACC-TTTTTCACA-TATCA--A-------TATA-TA--TA-GTT---AAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-TG-TG--TCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGTGGAAT-TGCA-TTT----GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAG-CT-TAGAAAT-GTGATCGTTCATC-TTTAAA-A-TC-AAGC-GGCA--AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-ACG-ACTTGAAA--AT-GAG-GGG-CT-------TTTCGA--TTTT-----T--TTTCTTCAGAAT-A--CTCAAATTCA---CA---TTG--TGG-ATTTTTTCGGGAAA--TT----GAGCA--TTAGCCCTTTT-AAGGAACT-A--------ATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAAGATTGTTTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TT-GTA---TTGGCACGGGAAG----AT--AAAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAGACTATa
gi|4 : tcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACA-TTATCTATTACC-TTTTTCACA-TATCA--A-------TATA-TA--TA-GTT---AAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-TG-TG--TCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGTGGAAT-TGCA-TTT----GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAGGCT-TAGAAAT-GTGATCGTTCATC-TTTAAA-A-TC-AAGC-GGCA--AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-ACG-ACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTT-----T--TTTCTTCAGAAT-A--CTCAAATTCA---CA---TTG--TGG-TTTTTT-CGGGAAA--TT----GAGCA--TTAGCCCTTTT-AAGGAACT-A--------ATTCAT-GCA-CTCAGTAAATTATGAAA--TTGTAAGATTGTT-AAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TTG-TA---TTGGCACGGGAAG----AT--AAAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAGACTATtctaaactagaaaaactac
gi|5 : tcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACA-TTATCTATTACC-TTTTTCACA-TATCA--A-------TATA-TA--TA-GTT---AAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-TG-TG--TCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGTGGAAT-TGCA-TTT----GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAG-CT-TAGAAAT-GTGATCGTTCATCTTT-AAA-A-TCAA-GCGG-CA--AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-ACG-ACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTTTTTTCT--T-----CAGAAT-ACTC---AA---ATT-CACATT-G--TGGTTTTTT--CGGGAAA--TT----GAGCA--TTAGC-CCTTTTAAGGAACT---------AATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAAGATTG-TTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TT-GTA---TTGGCACGGGAAG----AT--AAAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAGACTATtctaaactagaaaaactac
gi|6 : tcTTTGCCTA-GTTCCGAATAGGGTATTTTTTAGACTGGGATAT-AT-TCTA-CATA-----ACA-T-GTTTGAAACCATTTTCC---ATACAA--AAAAAAAACA-AATGAATA-ATT--TGAATCTTGTTT-AACTTT---AAATAGTATCAC-AAATAGTT-CT-G-------TAA-AAATCACCATGCTAGTTTTTTCTAAGATGGC--GA-AAAAGACAC-T-AT-TT-TGGCT-GCCTTGCAA-CGATTTTACCAGTT-CCGAT------CAGCCC----------------------CCTGTTCACA---GG---AGAAAATGCA-TCTAAA--AAGTATAAA--T----TTGGATTGAAAATAATAA---T-TAGAAAT-TTGATCTTTCATC-TG-AAG-A-AT-A--T-G-CAT-AATTTATG----TGGATCTATAAAGACATTCA------TACT---TT-GTTCACGGTCTTGAAA--TT-GAA-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAATA--C---AA---A---CA---T-G--GCG-TTTTT--C-GGCAA--TT----AAGC---CTC-CTCTTTTC-AGGAGCT-G-C--AT-AATTC-T-GCGTCTCAGTAAATTAAGAAAT-TTGAAGAA-TA-TTAACTGACGAA-GATTAAAATTCATTCTCACTATGTTTTAT--CTAATAATTTTGCAATGA-AAG----ATTAAAAGT-TTTTAACTACCA-TTAAACTTAA--TATTCGGAACTGGAAAAtctaaactagaaaaactac
gi|7 : gTTGTCTA-GTTCCGAATAGGGTATTTTT-AGACTGGGATATCAT--CT--C-TACGTT-ACG-T-GTTTGAAACCATTTTCCC--ATTTCA--A-------CA-A-T---TA-ATT--TGAA-CAT-TTT-A-CTTT---AAATA-TCTCACAAAATAGTT-CTTG-------TAT-AAGTCACCAT-CTAGAGTTT-CTATGGCGAC--GA-AAAAGATGCTC-AT-TT-CTGTG--CTTTGCA-TCGATTTTACCAGTA-CCGAA------TAGTCC----------------------C-TATTCACT---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGAATTGAAA-TAA-AAG-TT-TAGAAAT-TCGATCTTTCATC-TG-AAGAA-TC---GT-G-CAT-AATTTATG----TAGATCTATAGAACCATTCA------TACT---TTC-TTCACG-TCTTGAAA--AC-GAG-GAGTCT-------TTCCGA--TTTT-----T--T-----CTTAAA-A--T---AA---A---CA---TGG--CGG-ATTTT--CGGCAAA--TT----AAGCA--CTCCCTCTTTTTAAGGAGCT-ATT--AA-AATTCAA-GCG-CTCAGTAAATAACGAAAA-TTGAAGAATTATTCAACAGATGAAGGATTAAAGTTTATTA---TAATGTTTTAT--TTAATAATTTC-GCACCAAAAA----AT--AAAG--TTTTCACT--CA-TTAAACTTAAATTATTCGGAACTGGAAAACTATacttattccgaac
gi|8 : TTTCCCTAGCTCCCGAATAGGGTATTTTC-AGACAGGATTATTAC--CGAGC-TACGTTC-TG-T-GTTGGAAACCATTTTTCC--ATACCA--A-------CA-A-A---AT-ATT--TCAA-CTT-TTT----TTCTTTAAATA-TCTCACGAAATAATT-TTCG-------CAA-AGGTCAACAC-CTAGTCTTT-CTATGACGAC--AA-AAAAG-CCCC----------GTG-A-CGTGCAA-CAATTTC-CCAGTT-CTGGA------CATCCT----------------------C-TATTCACA---GGCGTAGAAAATGAC-TCAAAA-TGAGAATAAAC-T----TTGTA-TGAAA-TAA-AAG-TT-TTGAGAT-TTGATCTTTCATC-TG-AAGAA-TC-A-A--G-CAT-AATTTAGG----TATATCTTCAAAACAGTTCA------TAC----TTTATTTACG-TCTCGAAA--AT-GAG-GTGGCT-------TCCTTA--TTTTA----TAAT-----CAGAAA-A--C---AA---G---CC---T-GGCCGG--TTTT--TGGAATA--TT----AAGCA--ATCCATCTTTTCAAAGAGCTGA-A--AA-AATTCAT-GCT-CTGAGTAAATTATGAAAA-TTGTAGAATTATTTAACAGATA--------------ATCATAATAATATTTTAC--TTAA----TTC-GTACGAAAAG----AT--AAAG--TTTTCACT--CATTTAAACTTTAATTATTCGGAATTGGAAAACAATtcggaactaggcaa
gi|9 : ACCATTTT-AACATTACCA--A-------CA---T---TA--TT--TGAA-CTT-TTT-A-----TTTAAATA-TCTCAAGAAATATTTCTTCG-------TAA-AAGTCACGAT-CTAATGTT--CTAGGACGAC--GTTAAAAGACATCT-AT-ATATGA---GCCTTAGATTCAATTGTACCAGTT-CCGAA------TATCCC----------------------C-TAATCCTA---GAGTTA------------TAAT-GAAGAATAAAA-T----TAGGATTGAAA-TG----G-C-------------ATCTTTCATC-TG-CAG-AATC-A--T-G-CAT-AATTTATG----CAAATCTTATAAACCATTCA------TATT---ATTAT-CAGA-TCTTGAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--T-----CAT-AA-A--C---AA---G---TA---T-GA-TGG-ATTTT--CGGCAAA--TT----GAGCA--CTACATCTTTTTAAGGAACTAA-C--AA-AACTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAAC-GGTGAGAAATTAAAGTTTATTATCATGGCGTTTTAT--TTAATAATTTCGtcggaacaaagaa
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): ATTTAGTTTCGGACATGAAAGAAGACTTAAGCTCTACTTTTCTATTTTCCTCCTATTCATATCACCCATCCTCTTTTCTTTCTCCTTTT
Unaligned ( gi|26 ): AAAACAAACTTTATTCAACATGTATAACATTTAAAGAATGCCAAAGGTGAACGAATATTCCAGGCGACGTGACGTATGATACTG
Unaligned ( gi|30 ): CAGTATTGTTTAAATTGGAGGAAAATGTGTTTTCTGGTTTTCATTTTTACCTATTATTTGA
Unaligned ( gi|31 ): TTACATAATATATTGCTAAGCGGATGGCACAATTTATTCATGAAA
Alignments
lowQualScore : 1 11 3333 22222222222 1 2222222222 11111111 222222 11 2222222222222222222222 111 333333 1111 11111111111111 222222222222222222 1111 1111 222222 1 1 11 222 11 1 11 11 22222 1 11111 1
lowQualScore : 9 2 1 4 1 0 88 7777 88 6 3 9 0 4 4 1111 33 8888888 00000000000 666 2 3 6666666666 2 0 4 1 8 88888888 2 1 0 5 2 2 33 8 2 2 5 444444 77 2 666666 2222222222222222222222 2 444 1 66 2 5555 2 4444 2 2 8888 1 33 5 5 333 222222 5 22 1 5555 33 1 777777 0000 1 8 2 33 2 2 0 8888888 33 66666666666666 0 2 66 999 444444444444444444 2 66 1 33 0000 33 1111 1 333333 2 2 2 2 2 11 1 44 0 88 5 8888 55 99 0 666 4 0 1 1 1 2 1 5 5 66 1 111 22 88 0 2 55 33 2 0 33 1 33333 0 66666 5
lowQualScore : . . . . . . .. .... .. . . . . . . .... .. ....... ........... ... . . .......... . . . . . ........ . . . . . . .. . . . . ...... .. . ...... ...................... . ... . .. . .... . .... . . .... . .. . . ... ...... . .. . .... .. . ...... .... . . . .. . . . ....... .. .............. . . .. ... .................. . .. . .. .... .. .... . ...... . . . . . .. . .. . .. . .... .. .. . ... . . . . . . . . . .. . ... .. .. . . .. .. . . .. . ..... . ..... .
lowQualScore : 0 8 1 0 0 4 55 4444 55 5 1 2 3 9 0 1111 44 1111111 99999999999 111 7 3 7777777777 7 6 6 0 0 33333333 9 6 7 7 0 7 77 0 7 7 3 000000 66 1 111111 4444444444444444444444 2 444 2 66 4 1111 2 7777 2 4 7777 2 22 0 0 555 222222 0 77 0 3333 44 0 222222 1111 5 1 5 44 5 5 8 1111111 44 99999999999999 2 5 99 333 222222222222222222 7 33 5 77 3333 77 9999 2 333333 7 7 9 9 0 22 0 22 8 22 4 5555 55 55 6 111 0 8 0 1 0 7 0 5 0 55 0 555 00 00 7 0 88 22 5 8 88 2 88888 0 55555 0
consensus : NTTTGCCTAAGTTCCGAATAGGGTATTTTT-AGACNGGAATATTATATCTA-C-TACGTTTACG-T-GTTTGAAACCATTTTTCCCAATACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTTTTTAAATA-TCTCACGAAATANTT-TTCG-------TAA-AGGTCACCAT-CTAGTNTTT-CTATGACGAC--GA-AAAAGACGCCT-AT-TT-TGGTG-GCCTTACAATCGATTTTACCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAG-CT-TAGAAAT-TTGATCTTTCATC-TG-AAG-A-TC-A-GC-G-CAT-AATTTANG----TAGATCTTCAAAACNATTCA------TACT---TTTATTCACG-TCTTGAAA--AT-GAG-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAA-A--C---AA---A---CA---T-G--CGG-ATTTT--CGGGAAA--TT----GAGCA--CTNGCTCTTTTTAAGGAACT-A-C--AA-AATTCAT-GCG-CTCAGTAAATTACGAAAA-TTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCGTNATGTTTTAT--TTAATAATTTCGGCACGAGAAG----AT--AAAG--TTTTAACT--CA-TCAAACTTAAATNATTCGGAANTGGAAGACTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACNCTAGAATGGTGACCTTANCACAAGGANCATTTTGTGAGATATCTAAAAAAGTAAAAAGTTCAAATCAATTGTTGNNATTGGGAAAAATGGTTTCGAACACGTAAACGTAG-AGATGATATTCCAG--TCTAAAAATA---C-CCTATTCGGAAC-TAGCCAAA--GGACTGTACGTTTGAGT
Reference ( family-3174 ) : NTTTGCCTAAGTTCCGAATAGGGTATTTTT-AGACNGGAATATTATATCTA-C-TACGTTTACG-T-GTTTGAAACCATTTTTCCCAATACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTTTTTAAATA-TCTCACGAAATANTT-TTCG-------TAA-AGGTCACCAT-CTAGTNTTT-CTATGACGAC--GA-AAAAGACGCCT-AT-TT-TGGTG-GCCTTACAATCGATTTTACCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAG-CT-TAGAAAT-TTGATCTTTCATC-TG-AAG-A-TC-A-GC-G-CAT-AATTTANG----TAGATCTTCAAAACNATTCA------TACT---TTTATTCACG-TCTTGAAA--AT-GAG-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAA-A--C---AA---A---CA---T-G--CGG-ATTTT--CGGGAAA--TT----GAGCA--CTNGCTCTTTTTAAGGAACT-A-C--AA-AATTCAT-GCG-CTCAGTAAATTACGAAAA-TTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCGTNATGTTTTAT--TTAATAATTTCGGCACGAGAAG----AT--AAAG--TTTTAACT--CA-TCAAACTTAAATNATTCGGAANTGGAAGACTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACNCTAGAATGGTGACCTTANCACAAGGANCATTTTGTGAGATATCTAAAAAAGTAAAAAGTTCAAATCAATTGTTGNNATTGGGAAAAATGGTTTCGAACACGTAAACGTAG-AGATGATATTCCAG--TCTAAAAATA---C-CCTATTCGGAAC-TAGCCAAA--GGACTGTACGTTTGAGT
gi|1 : TTTGGCTAAGTTCCGAATAGGTTATTTTT-AGACTGGAATATCAT--CTT-C-TACGTTTACG-T-GTTTGAAATCATTTTTCCCAATTCCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTTTTTAAATA-TCTCACAAAATGTTC-TTTG-------TACTAAGTCACCATTCTAGAGTTT-CTATGATGACCGAA-AAAAGACGCCCCAT-TT-TGGTGAGCCTTGCCATCGATTTTACCAGTTTCCGAA------TAGCCC----------------------A-TATTCAAA---GGGGTAGAAAATGCAATCTAAAAGAAGAATAAAAAT----TTGAATTGAAA-TAA-AAA-ATATAGAGAC-TTGATCTTTCCTC-TG-A-G-A-CC-A-TC-C-CAT-AGTTTATG----TAG-TCTATAGAACCATTCA------TACT---TTTCTTCACG-TCTTGAAA--TT-GAG-GAGTCT-------TTCCGA--TTTT-----T--T-----CAAATA-A--C---AA---A---CA---T-G--CGG-ATTTT--CGGCAAAATTT----AAACA--CTCGTTCTTTTTAAGGAGCT-A-TCAAA-AATTCATCGCG-CTCAGTAAATAACAAAAAATTGAAGAATTATTTAGCAGATGAAAGATTAAAGTTTATTATCATAATGTTTTATATTCAATAATTTTGCCACGAAAAG----AT--AAAAGTTTTTAACT--CA-TTAAACTTAA-TTATTCGGAACTGGAA--CTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACTCTAGAATGGTGA-CTTAGTACAAAGAACATTTTGTGAGATATTTAAAAAAGTAAAAAGTTCAAATTAATTGTTGGAATTGGGAAAAATGATTTCAAACACGTAAACGTAGAAGATGATATTCCAG--TCTAAAAATA---A-CCTATTCGGAACTTAGCCAAAACGGACTGTACGTTTAAGT
gi|10 : tACCATTTT-AACATTACCA--A-------CA---T---TA--TT--TGAA-CTT-TTT-A-----TTTAAATA-TCTCAAGAAATATTTCTTCG-------TAA-AAGTCACGAT-CTAATGTT--CTAGGACGAC--GTTAAAAGACATCT-AT-ATATGA---GCCTTAGATTCAATTGTACCAGTT-CCGAA------TATCCC----------------------C-TAATCCTA---GAGTTA------------TAAT-GAAGAATAAAA-T----TAGGATTGAAA-TG----G-C-------------ATCTTTCATC-TG-CAG-AATC-A--T-G-CAT-AATTTATG----CAAATCTTATAAACCATTCA------TATT---ATTAT-CAGA-TCTTGAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--T-----CAT-AA-A--C---AA---G---TA---T-GA-TGG-ATTTT--CGGCAAA--TT----GAGCA--CTACATCTTTTTAAGGAACTAA-C--AA-AACTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAAC--GTGAGAAATTAAAGTTTATTATCATGGCGTTTTAT--TTAATAATTTCGatatttcaaagaatgaaatttatttctgaaa
gi|11 : atGATACCATTTTACC--ATACCA--A-------CA---T---TA--TT--TGAA-CTT-TTT-A----TTTTAAATA-TCTCAAGAAATAGTTCTTCG-------TAA-AAGTCACGAT-CTAATGTTT-CTAGGACGAC--GTTAAAAGACATCT-ATATT-TGA---GCCTTA-GATCAATTGTACCAGTT-CCGAA------TATCCC----------------------C-TAATCCTA---GAGTTA------------TAAT-GAAGAATAAAA-T----TAGGATTGAAA-TG----G-C-------------ATCTTTCATC-TG-CAG-AATC-A--T-G-CAT-AATTTATG----CAAATCTT-AAAACCATTCA------TA------TTATTCAGA-TCT-GAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--T-----CATAAA-A--C---AA---G---TA---T-GA-TGG-ATTTT--CGGCAAA--TT----GAGCA--CTACATCTTTTTAAGGAA---A-C--AA-AACTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAACACGTGGAGAATTAAAGTTTATTATCATGGCGTTTTAT--TTAATAATTTCG
gi|12 : -TACGTT-ACG-T-ATTTAAAACCATTTTGT---ATACCACAA-------TA-G-T---AA-ATTATTAAA-CAT-TT--A-CTTT----------------AAATATCT-TACA--------AA-A-----------TAATTTTT-------------GC-AAAGGCCGCCT--T-TT-TTGTG--CTTTACAA-CGATTTCCCCAGTT-C-GAT------TAACCT----------------------C-TACTCACA---GGGGTAGAAAATGCA-TCTAAA-GGAGAATGAAC-T----TTGGATTGAAA-AAA-AA-------------TTGATCTTTCATC-TG-AAGAA-TC-A-A--G-CAT-AATCTGGG----TAGATCTTCAGAACAATTCA------TAC----TTTATTTACG-T-TTGAAA--AA-TAA-GGTGCT-------GCTCGA--TTTA-----T---------AG-------------------------T-GA-CGA-A-TTC--CGGAAAA--TT----AAGCA--CTCA-TCTTTTCA--GGATA-A-C--AA-ACTTC-T-GCG-CTCAATAAATTATGACAA-T----AACTTATTCAATAGATG
gi|13 : tAATAAAA-T----TTGAATTGAAA-TAA-GAG-TT-CAGAAAT-TTGATCTTTCATC-TG-AAG-A-TT-C-AT-G-CAT-AATTTAGG----TAGATCCATAAAACACTCCA------TAC----TTTATTTACG-TCTTGAAA--AT-AAG-GGGTCT-------TTCCCA--TTTA-----T--T-----CATAAA-A--C---AA---A---CAT--T-G--CGG-ATTTT--CGGGAAA--TTTTA-AAGCACTCTCGCTTTTTTT-AGGA--T-T-C--AAGGATTCAT-GCG-CTCAGTAAATTATGAAAA-TTGTAGAATTGTTTAACATATGAAGGATCAGAGTATATT---GTGATGTTTTAT--TTAATAATTTC-GCACAAGAAGATAAAT--AAAG--TTTTCACT--CC-TCAAAATTAAATTATTCGGAGCTGGAAAACTATttcatagtatcaagtaaggagtcttttttatgcagaaatcttgcaacaagga
gi|14 : -GCTTTACAA-AGATTTCATCAATT-TCGAA------TAGCCCACAAATAATCAATCAATCAACCC-TATTCACACAGGGGAAAAAAAATGCA-TCTAAA-GAAGAATGAAA-T----TTGGATTGAAA-TAA-AAG-TT-CAAAAAT-TTGATCTTTCATC-TG-AAGAA-TC-A-A--G-CATAAATTTAGG----TAGATTT------CTGTTCA------T-CC---TTTATTTACG-TCTTAAAA--AT-GCA-GGGGCT-------TTCCGATTTTTT-----T--T-----TAGAAA-A--C---AA---A---CA---TGG--CGG-ACATT--CAGGAAA--TT----ATGCA----------TTTTGAGAAGCT------AA-CACTCAT-tcggagcttggaaaac
gi|15 : gtGGTAGAAAATGCA-TCGAAA-GGAAAATAAAC-T----TTGGAGTGAAA-TAA-AAG-TT-TTGAGATGTTGGTCTTTCATC-TG-AAG-ATTC-A-A--G-CAT-AATTTAGG----CAGATATTTAAAACAGTTCA------TAC----TTTATTCA---TATTGAAATGATCGAG-GGGGCT-------TCCCAA---TTT-----T--C-----CAGAAA-A--C---AA---A---CA---TGG--TGG-ATTTT--CGGAAAA--TTTTTAAAGCA--CTCGATCcaaccttaaatta
gi|16 : CCTA-GTTCCGAATAGGGTATTTTT-AGACTGGGGTATCAT--CT--C-TACGTT-ACA-T-GTTTGAAACCATTTGTCC--ATACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTT---AAGTA-TGTCACAAACTAGTT-TTTGAAAATTTTAA-AAGTCGCCAT-CTAGTGTTT-CTATGACGAC--AA-ATAAGACACCT-AT-TT-TCGT--GCCTTAC-ATCGAGTTTACCAGTT-CCGAA------TAGCTC----------------------acctaaattattcgagactggaaaactattccg
gi|17 : aTT-CCGAA------TAGCCTGGT-------------------C-TATTCA---------TAGAAAACGCA-TCTACA-TAAGAATGGAC-C----TTGGACTGAAA-TTA-AAG-TT-TTGAAAT-TTGATCTTCCATC-TG-AAGAA-TC-A-A--G-CAT-AATTTAGGTATATAGATCTTCAAAGCAGTTCATTATAGTACTTAATTTAGTAATG-TCTTGAAA--AT-AAATGGGGCTCCCAAGCTTCTTT--TTTT-----T--T-----TGGAAA-A--t
gi|18 : atcttacaatgctGGTATTTTG-GGATTGATATATTATCTCTA-C--A---TTACG-T-GTTTGAAACCATTTTCCC--ATACCA--A-------CA-A-C------------------------A-CATTTTT---------CACAAAAT-GTT-TTC---------AA-AGGTCACCAT-TTA----CT-TTATGACAAC--GA-TAAATTCACCT-AT-TT-TTGCG-G-CTTACAA-CGA-TTTACCAGTT-CCGAA------AAGACC----------------------C-T
gi|19 : agtcgatatgtacatGAAACACTAGA-TGGTGACTTT-CCACAAGAACTATTTTGTGAGATATCTAAA---GTAAAAAGTTCAAATCAATTGTTGCTAT--GGAAAAATGGTTTCAAACATGTAA-CATAG-AGATGATATCCCAG--TCTAAAAACA---C-CCTATTCGGAAC-TAGCCAAA--TGACTGTAta
gi|2 : AAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACATT-ATCTATTACC-TTTTTC---ACATCA--A-------TA-A-TA--TATAGT--TAAA-TTTGTTT-G-C---TTTAAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-T-GT--GTCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGTGGAATATGCA-TTT----GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAG-CT-TAGAAAT-GTGATCGTTCATCTTT-AAA-A-TCAA-GCGG-CAT-AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-ACG-ACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTTTTTTCT--T-----CAGAAT-ACTC---AA---AATTCACATT-G--TGG-ATTTT--CGGGAAA--TT----GAGCA--TTAGC-CCTTTTAAGGAACT---------AATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAGAATTGTTTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TTGATA---TTGGCACGGGAAG----AT--AAAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAGACTATa
gi|20 : ttttc-A-C--AA-AATTCAT-GCG-CTCAGTAATTTACGAAAA-TTGAAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCATGATGTTTTAT--TCAATAATTTT-GCACGAGATA----AT--AAAG--TTTTCACT--CA-CTAAACTTAAATCAtctaaactagaaaaactactgta
gi|21 : a-GCCTTACA-TCGATTTTACCAGTT-CCGAA------CAGCTC----------------------C-TATTCACA---GGGGCAGAAAATGCA-TCTAGA--AAGA--AGAA-T----TTCAACTGAAA-agacaaatgactatattccgga
gi|22 : gtCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTACAAACTGCA-CCTAAA-GAAGAATAAAA-TAAAATT---TTGAAA-TAA-AAT-C--TAGAAAT-TTGATCTTTCAaatcatgcataattttagatatgtagatcta
gi|23 : AATTGGTATGGAACA---GAACGTGG--GATGATATTCCAGATTCTAAAAAAAACGCGCCTATCCGAAAC-TAGCCA-----GACTGatataaaatggcgaagtaacaa
gi|25 : atgcagtattgtaatTTT-CTATGACGAC--GA-AAAAGACACCT-AT-CT-TTGT--GCCTTAC-GTTGATTTTATCAGTT-CCGAATACCGGTAGCCC----------------------C-AATTCAC
gi|27 : TTACA-C-GTTTGAAACCATTTTCCC--ATACCA--A-------CA-A-T---ga
gi|28 : ACA-T-GTTTAAAATCTTTTTTTTAAA---CA--G-------CA-A-T---AA-ATT--TGAA-CTT-TTTGA-----TTTAAATA-TATAACAAAATATTT-TTatacccttagatcttgaaaatagtatttgaactagaaaat
gi|29 : GTAAA-GTAG-AGAT----------------AAAATA---C-CCTATTCGGAAC-TAGGCAAA--GGACTGTAC-TTTGAAT
gi|3 : taagcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACA-TTATCTATTACC-TTTTTCACA-TATCA--A-------TATA-TA--TA-GTT---AAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-TG-TG--TCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGTGGAAT-TGCA-TTT----GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAG-CT-TAGAAAT-GTGATCGTTCATC-TTTAAA-A-TC-AAGC-GGCA--AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-ACG-ACTTGAAA--AT-GAG-GGG-CT-------TTTCGA--TTTT-----T--TTTCTTCAGAAT-A--CTCAAATTCA---CA---TTG--TGG-ATTTTTTCGGGAAA--TT----GAGCA--TTAGCCCTTTT-AAGGAACT-A--------ATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAAGATTGTTTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TT-GTA---TTGGCACGGGAAG----AT--AAAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAGACTATa
gi|4 : tcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACA-TTATCTATTACC-TTTTTCACA-TATCA--A-------TATA-TA--TA-GTT---AAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-TG-TG--TCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGTGGAAT-TGCA-TTT----GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAGGCT-TAGAAAT-GTGATCGTTCATC-TTTAAA-A-TC-AAGC-GGCA--AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-ACG-ACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTT-----T--TTTCTTCAGAAT-A--CTCAAATTCA---CA---TTG--TGG-TTTTTT-CGGGAAA--TT----GAGCA--TTAGCCCTTTT-AAGGAACT-A--------ATTCAT-GCA-CTCAGTAAATTATGAAA--TTGTAAGATTGTT-AAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TTG-TA---TTGGCACGGGAAG----AT--AAAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAGACTATtctaaactagaaaaactac
gi|5 : tcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACA-TTATCTATTACC-TTTTTCACA-TATCA--A-------TATA-TA--TA-GTT---AAA-TTTGTTT-G-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-TG-TG--TCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGTGGAAT-TGCA-TTT----GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAG-CT-TAGAAAT-GTGATCGTTCATCTTT-AAA-A-TCAA-GCGG-CA--AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-ACG-ACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTTTTTTCT--T-----CAGAAT-ACTC---AA---ATT-CACATT-G--TGGTTTTTT--CGGGAAA--TT----GAGCA--TTAGC-CCTTTTAAGGAACT---------AATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAAGATTG-TTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TT-GTA---TTGGCACGGGAAG----AT--AAAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAGACTATtctaaactagaaaaactac
gi|6 : tcTTTGCCTA-GTTCCGAATAGGGTATTTTTTAGACTGGGATAT-AT-TCTA-CATA-----ACA-T-GTTTGAAACCATTTTCC---ATACAA--AAAAAAAACA-AATGAATA-ATT--TGAATCTTGTTT-AACTTT---AAATAGTATCAC-AAATAGTT-CT-G-------TAA-AAATCACCATGCTAGTTTTTTCTAAGATGGC--GA-AAAAGACAC-T-AT-TT-TGGCT-GCCTTGCAA-CGATTTTACCAGTT-CCGAT------CAGCCC----------------------CCTGTTCACA---GG---AGAAAATGCA-TCTAAA--AAGTATAAA--T----TTGGATTGAAAATAATAA---T-TAGAAAT-TTGATCTTTCATC-TG-AAG-A-AT-A--T-G-CAT-AATTTATG----TGGATCTATAAAGACATTCA------TACT---TT-GTTCACGGTCTTGAAA--TT-GAA-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAATA--C---AA---A---CA---T-G--GCG-TTTTT--C-GGCAA--TT----AAGC---CTC-CTCTTTTC-AGGAGCT-G-C--AT-AATTC-T-GCGTCTCAGTAAATTAAGAAAT-TTGAAGAA-TA-TTAACTGACGAA-GATTAAAATTCATTCTCACTATGTTTTAT--CTAATAATTTTGCAATGA-AAG----ATTAAAAGT-TTTTAACTACCA-TTAAACTTAA--TATTCGGAACTGGAAAAtctaaactagaaaaactac
gi|7 : gTTGTCTA-GTTCCGAATAGGGTATTTTT-AGACTGGGATATCAT--CT--C-TACGTT-ACG-T-GTTTGAAACCATTTTCCC--ATTTCA--A-------CA-A-T---TA-ATT--TGAA-CAT-TTT-A-CTTT---AAATA-TCTCACAAAATAGTT-CTTG-------TAT-AAGTCACCAT-CTAGAGTTT-CTATGGCGAC--GA-AAAAGATGCTC-AT-TT-CTGTG--CTTTGCA-TCGATTTTACCAGTA-CCGAA------TAGTCC----------------------C-TATTCACT---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGAATTGAAA-TAA-AAG-TT-TAGAAAT-TCGATCTTTCATC-TG-AAGAA-TC---GT-G-CAT-AATTTATG----TAGATCTATAGAACCATTCA------TACT---TTC-TTCACG-TCTTGAAA--AC-GAG-GAGTCT-------TTCCGA--TTTT-----T--T-----CTTAAA-A--T---AA---A---CA---TGG--CGG-ATTTT--CGGCAAA--TT----AAGCA--CTCCCTCTTTTTAAGGAGCT-ATT--AA-AATTCAA-GCG-CTCAGTAAATAACGAAAA-TTGAAGAATTATTCAACAGATGAAGGATTAAAGTTTATTA---TAATGTTTTAT--TTAATAATTTC-GCACCAAAAA----AT--AAAG--TTTTCACT--CA-TTAAACTTAAATTATTCGGAACTGGAAAACTATacttattccgaac
gi|8 : TTTCCCTAGCTCCCGAATAGGGTATTTTC-AGACAGGATTATTAC--CGAGC-TACGTTC-TG-T-GTTGGAAACCATTTTTCC--ATACCA--A-------CA-A-A---AT-ATT--TCAA-CTT-TTT----TTCTTTAAATA-TCTCACGAAATAATT-TTCG-------CAA-AGGTCAACAC-CTAGTCTTT-CTATGACGAC--AA-AAAAG-CCCC----------GTG-A-CGTGCAA-CAATTTC-CCAGTT-CTGGA------CATCCT----------------------C-TATTCACA---GGCGTAGAAAATGAC-TCAAAA-TGAGAATAAAC-T----TTGTA-TGAAA-TAA-AAG-TT-TTGAGAT-TTGATCTTTCATC-TG-AAGAA-TC-A-A--G-CAT-AATTTAGG----TATATCTTCAAAACAGTTCA------TAC----TTTATTTACG-TCTCGAAA--AT-GAG-GTGGCT-------TCCTTA--TTTTA----TAAT-----CAGAAA-A--C---AA---G---CC---T-GGCCGG--TTTT--TGGAATA--TT----AAGCA--ATCCATCTTTTCAAAGAGCTGA-A--AA-AATTCAT-GCT-CTGAGTAAATTATGAAAA-TTGTAGAATTATTTAACAGATA--------------ATCATAATAATATTTTAC--TTAA----TTC-GTACGAAAAG----AT--AAAG--TTTTCACT--CATTTAAACTTTAATTATTCGGAATTGGAAAACAATtcggaactaggcaa
gi|9 : ACCATTTT-AACATTACCA--A-------CA---T---TA--TT--TGAA-CTT-TTT-A-----TTTAAATA-TCTCAAGAAATATTTCTTCG-------TAA-AAGTCACGAT-CTAATGTT--CTAGGACGAC--GTTAAAAGACATCT-AT-ATATGA---GCCTTAGATTCAATTGTACCAGTT-CCGAA------TATCCC----------------------C-TAATCCTA---GAGTTA------------TAAT-GAAGAATAAAA-T----TAGGATTGAAA-TG----G-C-------------ATCTTTCATC-TG-CAG-AATC-A--T-G-CAT-AATTTATG----CAAATCTTATAAACCATTCA------TATT---ATTAT-CAGA-TCTTGAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--T-----CAT-AA-A--C---AA---G---TA---T-GA-TGG-ATTTT--CGGCAAA--TT----GAGCA--CTACATCTTTTTAAGGAACTAA-C--AA-AACTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAAC-GGTGAGAAATTAAAGTTTATTATCATGGCGTTTTAT--TTAATAATTTCGtcggaacaaagaa
blockSeqs : A A G T T CT ACA CG T T T A A ACAT CA AAAAAAA AATGAATAA ATT T G ACATTTTT G G T C GAAAATTT . A G G T . T . A A TGCGG TT . TACCGG ACAAATAATCAATCAATCAACC C CAG G AA . AAT . AAAA A T GCT A GT T T AA AAGCG G TA T TATA TA C TTATAG TTAA T C G TG C T CCCAAGC TT TTTTCTT T CT TCA AATTCACATTGT T TT C . TTTA CT ACAT T AAC G . T . A CA G . AT G ATAA TA T TAC T T G C A A . C C C . CT . T AC A G AT C ACGCG . AAT .
blockSeqs : A A T . T AT AGC CG T . T A G TAAA . . ATATATA T . G AACTTT . G G C G . A . G . . T . . A GGCTG AT . . GGT . . A AA . AAT . . . . TT A T T T AA AAGCG G T T . TC C . T T C . . . . . . TTTTCTT . CT TCA ATTCACATTGT . T C . TTA . ACAT T ATT . . . . A CA G . AT G . . . T . A T A G . C A G . A C . AAG
blockSeqs : A A T . G AT AC TC T . T A T ACAT . . TATATAG T . G TTCTTT . A T C G . A . T . . T . . . TGTG AT . . . . . G AA . AAA . . . . TT T T . . AA AAGC . T G . AT A . C T T . . . . . . TTTTCTT . . . TTCACATTGT . . A . . . CGCT C GAA . . . . T TG G . AT G . . . G . C T A G A . . . T C . .
blockSeqs : A A T . G AT AT TC T . . A C ACA . . TATATAG T . G ATTTT . A G . A . G . G . . . . . . CGTG GT . . . . . G AA . AAA . . . . TT T T . . AA AAGC . T G . TT A . T T T . . . . . . TTTTCTT . . . TTCACATTGT . . G . . . CGAT T AAC . . . . T CA C . AT G . . . T . A T A G
blockSeqs : G . T . G AT AT TC T . . A T ACA . . TATATAG T . G ACTTT . A G . G . G . T . . . . . . TGTG TT . . . . . G TA . AAA . . . . TT A T . . AT CAT . T G . TC T . T T T . . . . . . ATAAT . . . GCCTGGCC . . G . . . AGCC T AC . . . . A TG G . AT G . . . G . A T A G
blockSeqs : . . G . G T AT TC T . . A C ACA . . GTAAA T . . ACTTT . A A . G . G . T . . . . . . TGTG A . . . . . G AA . ACA . . . . CT A G . . AA AT . T G . TC A . T T C . . . . . . TT . . . GTATGAT . . A . . . AGCC T AC . . . . T TG C . AT G . . . G . A G C A
blockSeqs : . . G . T . AT CG C . . T T CA . . ATTAA T . . GCTTT . A T . G . G . T . . . . . . GTGA A . . . . . C AC . AGA . . . . CT A T . . AA AT . T G . TC A . T T A . . . . . . TT . . . GTATGAT . . G . . . CCCT T TC . . . . T TG C . AT G . . . G . T G C A
blockSeqs : . . G . T . C CG . . . A T CA . . ATAAA T . . GATTT . A A . G . G . T . . . . . . GAG A . . . . . G AA . AAA . . . . CT A G . . AA AA . T A . TC T . T A C . . . . . . TT . . . ACATTGC . . G . . . CCAT C AC . . . . T CA C . . G . . . T . T G T A
blockSeqs : . A . C . . . . A T CA . . ATTAA T . . GCTTT . A A . . . A . T . . . . . . GAG A . . . . . G AA . AAA . . . . TT A G . . AA AA . T A . TC T . T A C . . . . . . TT . . . ACATGGC . . G . . . ACAT T GC . . . . A AA T . . . . . . T . T
blockSeqs : . . . . A T CA . . AAATA T . . GCTTT . A A . . . A . G . . . . . . GTG T . . . . . G AA . AAA . . . . TT A G . . A AA . T A . AT T . T A T . . . . . . TC . . . ACATGGT . . G . . . CAT C A . . . . A CA A . . .
blockSeqs : . . . A C CA . . TTA . . . GCTTT . G G . . . G . C . . . . . . GTG A . . . . . G T . AAA . . . . C A T . . A AA . T A . AT T . . A C . . . . . . TT . . . ACATGGC . . G . . . AGC T A . . . . T G A . . .
blockSeqs : . . . C CA . . TTA . . . ACTTT . G G . . . A . G . . . . . . GTG A . . . . . G T . AAT . . . . C T T . . A AT . T T . TC C . . C . . . . . . . TT . . . GTATGAT . . C . . . AGC . . . . . . A . G . . .
blockSeqs : . T A . . TTA . . . ATTT . . A . . . . . . . . . . . . GTG A . . . . . G T . . . . . . C . T . . A GT . . T . TA C . . T . . . . . . . TT . . . ACATGG . . A . . . CCT . . . . . . .
blockSeqs : . . A . . AC . . . ATTT . . T . . . . . . . GAG A . . . . . . . . . . . . . T . . . . A AA . . G . T A . . T . . . . . . . TT . . . TGAC . . C . . . . . . .
blockSeqs : . . A . . T . . . . . . . . . . . . . C . . . . A AT . . T . . C . . . . . . . . . . T . .
blockSeqs : A . . . . . . . . . . . . . . .
blockSeqs : . . . . . . .
blockSeqs : . . .
blockSeqCons : AT CA** GCTTT***** ** GTG*** A* AAA* TT** AA* AN**** ACATGGT*********** ** AC**** ** **
originalCons : NTTTGCCTAAGTTCCGAATAGGGTATTTTT-AGACNGGAATATTATATCTA-C-TACGTTTACG-T-GTTTGAAACCATTTTTCCCAATACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTT-A-CTTTTTTAAATA-TCTCACGAAATANTT-TTCG-------TAA-AGGTCACCAT-CTAGTNTTT-CTATGACGAC--GA-AAAAGACGCCT-AT-TT-TGGTG-GCCTTACAATCGATTTTACCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAG-CT-TAGAAAT-TTGATCTTTCATC-TG-AAG-A-TC-A-GC-G-CAT-AATTTANG----TAGATCTTCAAAACNATTCA------TACT---TTTATTCACG-TCTTGAAA--AT-GAG-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAA-A--C---AA---A---CA---T-G--CGG-ATTTT--CGGGAAA--TT----GAGCA--CTNGCTCTTTTTAAGGAACT-A-C--AA-AATTCAT-GCG-CTCAGTAAATTACGAAAA-TTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCGTNATGTTTTAT--TTAATAATTTCGGCACGAGAAG----AT--AAAG--TTTTAACT--CA-TCAAACTTAAATNATTCGGAANTGGAAGACTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACNCTAGAATGGTGACCTTANCACAAGGANCATTTTGTGAGATATCTAAAAAAGTAAAAAGTTCAAATCAATTGTTGNNATTGGGAAAAATGGTTTCGAACACGTAAACGTAG-AGATGATATTCCAG--TCTAAAAATA---C-CCTATTCGGAAC-TAGCCAAA--GGACTGTACGTTTGAGT
finalCons : NTTTGCCTAAGTTCCGAATAGGGTATTTTT-AGACNGGAATATTATATCTA-C-TACGTTTACG-T-GTTTGAAACCATTTTTCCA--TACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTTGCTTT-----AAATA-TCTCACGAAATANTT-TTCG-------TAA-AGGTCACCAT-CTAGTNTTT-CTATGACGAC--GA-AAAAGACGCCT-AT-TT-TGTG---CCTTACAA-CGATTTTACCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGGATTGAAA-TAA-AAGTT--TAGAAAT-TTGATCTTTCATC-TG-AAGAA-TCAN----G-CAT-AATTTANG----TAGATCTTCAAAACNATTCA------TACT---TTTATTCACG-TCTTGAAA--AT-GAG-GGGGCT-------TTCCGA--TTTT-----T--T-----CAGAAA-A--C---AAACATGGT-----------GG-ATTTT--CGGGAAA--TT----GAGCA--CTNGCTCTTTTTAAGGAACTAC----AA-AATTCAT-GCG-CTCAGTAAATTACGAAAA-TTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCGTNATGTTTTAT--TTAATAATTTCGGCACGAGAAG----AT--AAAG--TTTTAACT--CA-TCAAACTTAAATNATTCGGAANTGGAAGACTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACNCTAGAATGGTGACCTTANCACAAGGANCATTTTGTGAGATATCTAAAAAAGTAAAAAGTTCAAATCAATTGTTGNNATTGGGAAAAATGGTTTCGAACACGTAAACGTAG-AGATGATATTCCAG--TCTAAAAATA---C-CCTATTCGGAAC-TAGCCAAA--GGACTGTACGTTTGAGT
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): ATTTAGTTTCGGACATGAAAGAAGACTTAAGCTCTACTTTTCTATTTTCCTCCTATTCATATCACCCATCCTCTTTTCTTTCTCCTTTT
Unaligned ( gi|26 ): AAAACAAACTTTATTCAACATGTATAACATTTAAAGAATGCCAAAGGTGAACGAATATTCCAGGCGACGTGACGTATGATACTG
Unaligned ( gi|30 ): CAGTATTGTTTAAATTGGAGGAAAATGTGTTTTCTGGTTTTCATTTTTACCTATTATTTGA
Unaligned ( gi|31 ): TTACATAATATATTGCTAAGCGGATGGCACAATTTATTCATGAAA
Alignments
lowQualScore : 1 11 1 22222222222 1 11111111 2222222222222222222222 11111111 11 1111 22222 1111 22222 1111 1111 222222 1 1 11 222 11 1 11 11 22222 1 11111 1
lowQualScore : 9 2 1 4 1 0 88 7777 88 6 2 0 4 3 7 33 5 33 8888888 00000000000 666 2 3 999 444 2 4 1 8 88888888 2 1 0 5 2 2 33 8 0 2 5 8 4 55 33 77 2 666666 2222222222222222222222 2 444 11 1 2 5555 2 4444 2 00000000 77777 0 0 33 2 2 33 7777 22 1 5555 33 1 777777 0000 1 8 2 33 2 2 8888888 33 77777 33 0 4444 33333 33 6666 1 33 0000 33 6666 666666 2 2 2 2 2 1 11 1 44 3 88 5 8888 55 99 0 666 4 0 1 1 1 2 1 5 5 66 1 111 22 88 0 2 55 33 2 0 33 1 33333 0 66666 5
lowQualScore : . . . . . . .. .... .. . . . . . . .. . .. ....... ........... ... . . ... ... . . . . ........ . . . . . . .. . . . . . . .. .. .. . ...... ...................... . ... .. . . .... . .... . ........ ..... . . .. . . .. .... .. . .... .. . ...... .... . . . .. . . ....... .. ..... .. . .... ..... .. .... . .. .... .. .... ...... . . . . . . .. . .. . .. . .... .. .. . ... . . . . . . . . . .. . ... .. .. . . .. .. . . .. . ..... . ..... .
lowQualScore : 0 8 1 0 0 4 55 4444 55 5 3 3 9 2 5 44 0 44 1111111 99999999999 111 7 3 999 777 7 6 0 0 33333333 9 6 7 7 0 7 77 0 8 7 3 0 7 66 22 88 1 111111 4444444444444444444444 2 444 88 2 4 1111 2 7777 2 33333333 33333 7 3 99 2 0 44 8888 88 0 3333 44 0 222222 1111 5 1 5 44 5 5 1111111 44 55555 44 4 9999 77777 77 1111 5 77 3333 77 4444 555555 7 7 9 9 0 5 22 0 22 5 22 4 5555 55 55 6 111 0 8 0 1 0 7 0 5 0 55 0 555 00 00 7 0 88 22 5 8 88 2 88888 0 55555 0
consensus : NTTTGCCTAAGTTCCGAATAGGGTATTTTT-AGACNGGAATATTATATCTA-C-TACGTTTACGT-GTTTGAAACCATTTTTC-C--AT-ACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTTA-CTTT---AAATA-TCTCACGAAATANTT-TTCG-------TAA-AGGTCACCAT-CTAGTNTTT-CTATGACGAC--GA-AAAAGACGCCT-AT-TT-T-G--TG--CCTTACAA-CGATTTTACCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGGATTGAAA-TAA--------AA-GCT-TAGAAAT-TT-GATCTTTCATCTGNAGA--ATCA---NGCAT--AATTTANG----TAGATCTTCAAAACNATTCA------TACT---TTTATTCACG-TCTTGAAA--AT-GAG-GGGGCT-------TTCCGA--TTTT-----T--TCAGAAA-A--CAA-----ACATGGCG--G-A--TTTTCGGGAAA--TT----GAGCA--CTNGCTCTTTTTAAGGAACT-A-C--AA-AATTCAT-GCG-CTCAGTAAATTACGAAAA-TTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCGTNATGTTTTAT--TTAATAATTTCGGCACGAGAAG----AT--AAAG--TTTTAACT--CA-TCAAACTTAAATNATTCGGAANTGGAAGACTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACNCTAGAATGGTGACCTTANCACAAGGANCATTTTGTGAGATATCTAAAAAAGTAAAAAGTTCAAATCAATTGTTGNNATTGGGAAAAATGGTTTCGAACACGTAAACGTAG-AGATGATATTCCAG--TCTAAAAATA---C-CCTATTCGGAAC-TAGCCAAA--GGACTGTACGTTTGAGT
Reference ( family-3174 ) : NTTTGCCTAAGTTCCGAATAGGGTATTTTT-AGACNGGAATATTATATCTA-C-TACGTTTACGT-GTTTGAAACCATTTTTC-C--AT-ACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTTG-CTTT---AAATA-TCTCACGAAATANTT-TTCG-------TAA-AGGTCACCAT-CTAGTNTTT-CTATGACGAC--GA-AAAAGACGCCT-AT-TT-T-G--TG--CCTTACAA-CGATTTTACCAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGGATTGAAA-TAA--------AA-GTT-TAGAAAT-TT-GATCTTTCATCTGAAGA--ATCA---NGCAT--AATTTANG----TAGATCTTCAAAACNATTCA------TACT---TTTATTCACG-TCTTGAAA--AT-GAG-GGGGCT-------TTCCGA--TTTT-----T--TCAGAAA-A--CAA-----ACATGGTG--G-A--TTTTCGGGAAA--TT----GAGCA--CTNGCTCTTTTTAAGGAACT-A-C--AA-AATTCAT-GCG-CTCAGTAAATTACGAAAA-TTGNAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCGTNATGTTTTAT--TTAATAATTTCGGCACGAGAAG----AT--AAAG--TTTTAACT--CA-TCAAACTTAAATNATTCGGAANTGGAAGACTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACNCTAGAATGGTGACCTTANCACAAGGANCATTTTGTGAGATATCTAAAAAAGTAAAAAGTTCAAATCAATTGTTGNNATTGGGAAAAATGGTTTCGAACACGTAAACGTAG-AGATGATATTCCAG--TCTAAAAATA---C-CCTATTCGGAAC-TAGCCAAA--GGACTGTACGTTTGAGT
gi|1 : TTTGGCTAAGTTCCGAATAGGTTATTTTT-AGACTGGAATATCAT--CTT-C-TACGTTTACGT-GTTTGAAATCATTTTTC-CCAAT-TCCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTTA-CTTTTTTAAATA-TCTCACAAAATGTTC-TTTG-------TACTAAGTCACCATTCTAGAGTTT-CTATGATGACCGAA-AAAAGACGCCCCAT-TT-T-GG-TGAGCCTTGCCATCGATTTTACCAGTTTCCGAA------TAGCCC----------------------A-TATTCAAA---GGGGTAGAAAATGCAATCTAAAAGAAGAATAAAAAT----TTGAATTGAAA-TAA--------AA-AATATAGAGAC-TT-GATCTTTCCTCTGA-GACCATCC-----CAT--AGTTTATG----TAG-TCTATAGAACCATTCA------TACT---TTTCTTCACG-TCTTGAAA--TT-GAG-GAGTCT-------TTCCGA--TTTT-----T--TCAAATA-A--CAA-----ACATG-CG--G-A--TTTTCGGCAAAATTT----AAACA--CTCGTTCTTTTTAAGGAGCT-A-TCAAA-AATTCATCGCG-CTCAGTAAATAACAAAAAATTGAAGAATTATTTAGCAGATGAAAGATTAAAGTTTATTATCATAATGTTTTATATTCAATAATTTTGCCACGAAAAG----AT--AAAAGTTTTTAACT--CA-TTAAACTTAA-TTATTCGGAACTGGAA--CTATGGATGGTTCTTCAGATGAAAGATCAAGTCTCTATATTTTTTATTTCAATTCAAATTTTTATTCTTCTTTTAGATTGCATTTTCTACCCCTTTGAATATGGGCTATTCGGAAACTGGTAAAATCGATGGCAAGGCTCACCAAAATGGGGCGTCTTTTTTCGGTCATCATAGAAACTCTAGAATGGTGA-CTTAGTACAAAGAACATTTTGTGAGATATTTAAAAAAGTAAAAAGTTCAAATTAATTGTTGGAATTGGGAAAAATGATTTCAAACACGTAAACGTAGAAGATGATATTCCAG--TCTAAAAATA---A-CCTATTCGGAACTTAGCCAAAACGGACTGTACGTTTAAGT
gi|10 : tACCATTTTAA-C--ATTACCA--A-------CA---T---TA--TT--TGAA-CTT-TTTA--TTT---AAATA-TCTCAAGAAATATTTCTTCG-------TAA-AAGTCACGAT-CTAATGTT--CTAGGACGAC--GTTAAAAGACATCT-AT-ATAT-G--AG--CCTTAGATTCAATTGTACCAGTT-CCGAA------TATCCC----------------------C-TAATCCTA---GAGTTA------------TAAT-GAAGAATAAAA-T----TAGGATTGAAA-TG------------GC--------------ATCTTTCATCTGCAGA--ATCA---TGCAT--AATTTATG----CAAATCTTATAAACCATTCA------TATT---ATTAT-CAGA-TCTTGAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--TCATAAA----CAA-----GTATGATG--G-A--TTTTCGGCAAA--TT----GAGCA--CTACATCTTTTTAAGGAACTAA-C--AA-AACTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAAC--GTGAGAAATTAAAGTTTATTATCATGGCGTTTTAT--TTAATAATTTCGatatttcaaagaatgaaatttatttctgaaa
gi|11 : atGATACCATTTTAC-C--AT-ACCA--A-------CA---T---TA--TT--TGAA-CTT-TTTA-TTTT---AAATA-TCTCAAGAAATAGTTCTTCG-------TAA-AAGTCACGAT-CTAATGTTT-CTAGGACGAC--GTTAAAAGACATCT-ATATT-T-G--AG--CCTTAGAT-CAATTGTACCAGTT-CCGAA------TATCCC----------------------C-TAATCCTA---GAGTTA------------TAAT-GAAGAATAAAA-T----TAGGATTGAAA-TG------------GC--------------ATCTTTCATCTGCAGA--ATCA---TGCAT--AATTTATG----CAAATCTT-AAAACCATTCA------TA------TTATTCAGA-TCT-GAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--TCATAAA-A--CAA-----GTATGATG--G-A--TTTTCGGCAAA--TT----GAGCA--CTACATCTTTTTAAGGAA---A-C--AA-AACTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAACACGTGGAGAATTAAAGTTTATTATCATGGCGTTTTAT--TTAATAATTTCG
gi|12 : -TACGTT-ACGT-ATTTAAAACCATTTTGT----AT-ACCACAA-------TA-G-T---AA-ATTATTAAA-CAT-TT-A-CTTT---A-------------AATATCT-TACA--------AA-A-----------TAATTTTT-------------GC-AAAGGCCGCCT-TT-TT-T-G--TG--CTTTACAA-CGATTTCCCCAGTT-C-GAT------TAACCT----------------------C-TACTCACA---GGGGTAGAAAATGCA-TCTAAA-GGAGAATGAAC-T----TTGGATTGAAA-AAA--------AA-------------TT-GATCTTTCATCTGAAGA--ATCA---AGCAT--AATCTGGG----TAGATCTTCAGAACAATTCA------TAC----TTTATTTACG-T-TTGAAA--AA-TAA-GGTGCT-------GCTCGA--TTT------------------------------ATAGTGACG-A--ATTCCGGAAAA--TT----AAGCA--CTCA-TCTTTTCA--GGATA-A-C--AA-ACTTC-T-GCG-CTCAATAAATTATGACAA-T----AACTTATTCAATAGATG
gi|13 : tAATAAAA-T----TTGAATTGAAA-TAA--------GA-GTT-CAGAAAT-TT-GATCTTTCATCTGAAGA--TTCA---TGCAT--AATTTAGG----TAGATCCATAAAACACTCCA------TAC----TTTATTTACG-TCTTGAAA--AT-AAG-GGGTCT-------TTCCCA--TTTA-----T--TCATAAA-A--CAA-----ACATTGCG--G-A--TTTTCGGGAAA--TTTTA-AAGCACTCTCGCTTTTTTT-AGGA--T-T-C--AAGGATTCAT-GCG-CTCAGTAAATTATGAAAA-TTGTAGAATTGTTTAACATATGAAGGATCAGAGTATATT---GTGATGTTTTAT--TTAATAATTTC-GCACAAGAAGATAAAT--AAAG--TTTTCACT--CC-TCAAAATTAAATTATTCGGAGCTGGAAAACTATttcatagtatcaagtaaggagtcttttttatgcagaaatcttgcaacaagga
gi|14 : -G--TG--CTTTACAA-AGATTTCATCAATT-TCGAA------TAGCCCACAAATAATCAATCAATCAACCC-TATTCACACAGGGGAAAAAAAATGCA-TCTAAA-GAAGAATGAAA-T----TTGGATTGAAA-TAA--------AA-GTT-CAAAAAT-TT-GATCTTTCATCTGAAGA--ATCA---AGCATA-AATTTAGG----TAGATTT------CTGTTCA------T-CC---TTTATTTACG-TCTTAAAA--AT-GCA-GGGGCT-------TTCCGATTTTTT-----T--TTAGAAA-A--CAA-----ACATGGCG--G-A--CATTCAGGAAA--TT----ATGCA----------TTTTGAGAAGCT------AA-CACTCAT-tcggagcttggaaaac
gi|15 : GGTAGAAAATGCA-TCGAAA-GGAAAATAAAC-T----TTGGAGTGAAA-TAA--------AA-GTT-TTGAGATGTT-GGTCTTTCATCTGAAGA--TTCA---AGCAT--AATTTAGG----CAGATATTTAAAACAGTTCA------TAC----TTTATTCA---TATTGAAATGATCGAG-GGGGCT-------TCCCAA---TTT-----T--CCAGAAA-A--CAA-----ACATGGTG--G-A--TTTTCGGAAAA--TTTTTAAAGCA--CTCGATCcaaccttaaatta
gi|16 : CCTA-GTTCCGAATAGGGTATTTTT-AGACTGGGGTATCAT--CT--C-TACGTT-ACAT-GTTTGAAACCATTTGTC-C--AT-ACCA--A-------CA-A-T---TA-ATT--TGAA-CTT-TTTA-CTTT---AAGTA-TGTCACAAACTAGTT-TTTGAAAATTTTAA-AAGTCGCCAT-CTAGTGTTT-CTATGACGAC--AA-ATAAGACACCT-AT-TT-TCG--TG--CCTTACAT-CGAGTTTACCAGTT-CCGAA------TAGCTC----------------------acctaaattattcgagactggaaaactattccg
gi|17 : aCTTACAA-TGCTTT---------CCGAA------TAGCCTGGT-------------------C-TATTCA---------TAGAAAACGCA-TCTACA-TAAGAATGGAC-C----TTGGACTGAAA-TTA--------AA-GTT-TTGAAAT-TT-GATCTTCCATCTGAAGA--ATCA---AGCAT--AATTTAGGTATATAGATCTTCAAAGCAGTTCATTATAGTACTTAATTTAGTAATG-TCTTGAAA--AT-AAATGGGGCTCCCAAGCTTCTTT--TTTT-----T--TTGGAAA-A--t
gi|18 : atGGTATTTTG-GGATTGATATATTATCTCTA-C--A---TTACGT-GTTTGAAACCATTTTCC-C--AT-ACCA--A-------CA-A-C--------------A-CAT-TTT-----------------TCACAAAAT-GTT-TTC---------AA-AGGTCACCAT-TTA----CT-TTATGACAAC--GA-TAAATTCACCT-AT-TT-TTG--CG--GCTTACAA-CGA-TTTACCAGTT-CCGAA------AAGACC----------------------C-T
gi|19 : agtcgatatgtacatGAAACACTAGA-TGGTGACTTT-CCACAAGAACTATTTTGTGAGATATCTAAA---GTAAAAAGTTCAAATCAATTGTTGCTAT--GGAAAAATGGTTTCAAACATGTAA-CATAG-AGATGATATCCCAG--TCTAAAAACA---C-CCTATTCGGAAC-TAGCCAAA--TGACTGTAta
gi|2 : AAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACATTATCTATTACC--TTTTT-C--AC-ATCA--A-------TA-A-TA--TATAGT--TAAA-TTTGTTTG-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-T-G--TG--TCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGTGGAATATGCA-TTT----GAAGAATAAAA-T----TTGGATTGAAA-TAA--------AA-GCT-TAGAAAT-GT-GATCGTTCATCTTTAAA--ATCAAGCGGCAT--AATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-ACG-ACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTTTTTTCT--TCAGAAT-ACTCAAAATTCACATTGTG--G-A--TTTTCGGGAAA--TT----GAGCA--TTAGC-CCTTTTAAGGAACT---------AATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAGAATTGTTTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TTGATA---TTGGCACGGGAAG----AT--AAAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAGACTATa
gi|20 : ttttc-A-C--AA-AATTCAT-GCG-CTCAGTAATTTACGAAAA-TTGAAGAATTATTTAACAGATGAAGGATTAAAGTTTATTATCATGATGTTTTAT--TCAATAATTTT-GCACGAGATA----AT--AAAG--TTTTCACT--CA-CTAAACTTAAATCAtctaaactagaaaaactactgta
gi|21 : a-G--TG--CCTTACAT-CGATTTTACCAGTT-CCGAA------CAGCTC----------------------C-TATTCACA---GGGGCAGAAAATGCA-TCTAGA--AAGA--AGAA-T----TTCAACTGAAA--AATCATGCATAA-TTT-TAGATAT-GTAGATCTagacaaatgactatattccgga
gi|22 : CAGTT-CCGAA------TAGCCC----------------------C-TATTCACA---GGGGTACAAACTGCA-CCTAAA-GAAGAATAAAA-TAAAATT---TTGAAA-TAA--------AA--TC-TAGAAAT-TT-GATCTTTCAa
gi|23 : AATTGGTATGGAACA---GAACGTGG--GATGATATTCCAGATTCTAAAAAAAACGCGCCTATCCGAAAC-TAGCCA-----GACTGatataaaatggcgaagtaacaa
gi|25 : atgcagtattgtaatTTT-CTATGACGAC--GA-AAAAGACACCT-ATCTT-T-G--TG--CCTTACGT-TGATTTTATCAGTT-CCGAATACCGGTAGCCC----------------------C-AATTCAC
gi|27 : TTACAC-GTTTGAAACCATTTTCC-C--AT-ACCA--A-------CA-A-T---ga
gi|28 : ACAT-GTTTAAAATCTTTTTTT-T--A--AACA--G-------CA-A-T---AA-ATT--TGAA-CTT-TTTG-ATTT---AAATA-TATAACAAAATATTT-TTatacccttagatcttgaaaatagtatttgaactagaaaat
gi|29 : GTAAA-GTAG-AGAT----------------AAAATA---C-CCTATTCGGAAC-TAGGCAAA--GGACTGTAC-TTTGAAT
gi|3 : taagcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACATTATCTATTACC-TTTTTCAC--AT-ATCA--A-------TATA-TA--TA-GTT---AAA-TTTGTTTG-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-T-G--TG--TCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGT-GGAATTGCA-TTT----GAAGAATAAAA-T----TTGGATTGAAA-TAA--------AA-GCT-TAGAAAT-GT-GATCGTTCATCTTTAAA--ATCA---AGCGGCAAATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-ACG-ACTTGAAA--AT-GA--GGGGCT-------TTTCGA--TTTTTTTTCT--TCAGAAT-ACTCAAATTC-ACATTGTG--G-ATTTTTTCGGGAAA--TT----GAGCA--TTAGC-CCTTTTAAGGAACT---------AATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAAGATTGTTTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TT-GTA---TTGGCACGGGAAG----AT--AAAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAGACTATa
gi|4 : tcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACATTATCTATTACC-TTTTTCAC--AT-ATCA--A-------TATA-TA--TA-GTT---AAA-TTTGTTTG-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-T-G--TG--TCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGT-GGAATTGCA-TTT----GAAGAATAAAA-T----TTGGATTGAAA-TAA--------AAGGCT-TAGAAAT-GT-GATCGTTCATCTTTAAA--ATCA---AGCGGCAAATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-ACG-ACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTTTTTTCT--TCAGAAT-ACTCAAATTC-ACATTGTG--GTT--TTTTCGGGAAA--TT----GAGCA--TTAGC-CCTTTTAAGGAACT---------AATTCAT-GCA-CTCAGTAAATTATG-AAA-TTGTAAGATTG-TTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TT-GTA---TTGGCACGGGAAG----AT--AAAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAGACTATtctaaactagaaaaactac
gi|5 : tcAAGTTCCGA-TATGGTATTTTT-AGGCGGGAATATTATATCTA-T-TATCTCTACATTATCTATTACC-TTTTTCAC--AT-ATCA--A-------TATA-TA--TA-GTT---AAA-TTTGTTTG-CTTT---AAATA-TCGTACAAAATAATT-TTC--------TAA-AGGTCAACAT-CTAGTTTTT-CTATAACGAC--GA-AAAAGAGGCCT-AT-TT-T-G--TG--TCTTACAA-CGATTTTACCAGTT-CCAAA------CAACCT----------------------T-TATTCACA---AGGGT-GGAATTGCA-TTT----GAAGAATAAAA-T----TTGGATTGAAA-TAA--------AA-GCT-TAGAAAT-GT-GATCGTTCATCTTTAAA--ATCA---AGCGGCAAATTTAAG----TAGATCTTCAAGATTATTCA------TACT---TTAATT-ACG-ACTTGAAA--AT-GAG-GGGGCT-------TTTCGA--TTTTTTTTCT--TCAGAAT-ACTCAAATTC-ACATTGTG--GTT--TTTTCGGGAAA--TT----GAGCA--TTAGC-CCTTTTAAGGAACT---------AATTCAT-GCA-CTCAGTAAATTATGAAAA-TTGTAAGATTG-TTAAAAGATGAAGGATTAGAGTTTATTATTGTCATGTTTTAT--TT-GTA---TTGGCACGGGAAG----AT--AAAG--TTTTAAAG--CA-TCAGACTTAAATAATTCTGAAATGGAAGACTATtctaaactagaaaaactac
gi|6 : tcTTTGCCTA-GTTCCGAATAGGGTATTTTTTAGACTGGGATAT-AT-TCTA-CATA-----ACAT-GTTTGAAACCATTTT-C-C--AT-ACAA--AAAAAAAACA-AATGAATA-ATT--TGAATCTTGTTTAACTTT---AAATAGTATCAC-AAATAGTT-CT-G-------TAA-AAATCACCATGCTAGTTTTTTCTAAGATGGC--GA-AAAAGACAC-T-AT-TT-T-GGCTG--CCTTGCAA-CGATTTTACCAGTT-CCGAT------CAGCCC----------------------CCTGTTCACA---GG---AGAAAATGCA-TCTAAA--AAGTATAAA--T----TTGGATTGAAAATAAT-------AA---T-TAGAAAT-TT-GATCTTTCATCTGAAGA--AT-A---TGCAT--AATTTATG----TGGATCTATAAAGACATTCA------TACT---TT-GTTCACGGTCTTGAAA--TT-GAA-GGGGCT-------TTCCGA--TTTT-----T--TCAGAAATA--CAA-----ACATGGCG-------TTTTTCGGCAA--TT----AAGC---CTC-CTCTTTTC-AGGAGCT-G-C--AT-AATTC-T-GCGTCTCAGTAAATTAAGAAAT-TTGAAGAA-TA-TTAACTGACGAA-GATTAAAATTCATTCTCACTATGTTTTAT--CTAATAATTTTGCAATGA-AAG----ATTAAAAGT-TTTTAACTACCA-TTAAACTTAA--TATTCGGAACTGGAAAAtctaaactagaaaaactac
gi|7 : gTTGTCTA-GTTCCGAATAGGGTATTTTT-AGACTGGGATATCAT--CT--C-TACGTT-ACGT-GTTTGAAACCATTTTCC-C--AT-TTCA--A-------CA-A-T---TA-ATT--TGAA-CAT-TTTA-CTTT---AAATA-TCTCACAAAATAGTT-CTTG-------TAT-AAGTCACCAT-CTAGAGTTT-CTATGGCGAC--GA-AAAAGATGCTC-AT-TTCT-G--TG--CTTTGCAT-CGATTTTACCAGTA-CCGAA------TAGTCC----------------------C-TATTCACT---GGGGTAGAAAATGCA-TCTAAA-GAAGAATAAAA-T----TTGAATTGAAA-TAA--------AA-GTT-TAGAAAT-TC-GATCTTTCATCTGAAGA--ATCG---TGCAT--AATTTATG----TAGATCTATAGAACCATTCA------TACT---TTC-TTCACG-TCTTGAAA--AC-GAG-GAGTCT-------TTCCGA--TTTT-----T--TCTTAAA-A--TAA-----ACATGGCG--G-A--TTTTCGGCAAA--TT----AAGCA--CTCCCTCTTTTTAAGGAGCT-ATT--AA-AATTCAA-GCG-CTCAGTAAATAACGAAAA-TTGAAGAATTATTCAACAGATGAAGGATTAAAGTTTATTA---TAATGTTTTAT--TTAATAATTTC-GCACCAAAAA----AT--AAAG--TTTTCACT--CA-TTAAACTTAAATTATTCGGAACTGGAAAACTATacttattccgaac
gi|8 : TTTCCCTAGCTCCCGAATAGGGTATTTTC-AGACAGGATTATTAC--CGAGC-TACGTTC-TGT-GTTGGAAACCATTTTTC-C--AT-ACCA--A-------CA-A-A---AT-ATT--TCAA-CTT-TTTTTCTTT---AAATA-TCTCACGAAATAATT-TTCG-------CAA-AGGTCAACAC-CTAGTCTTT-CTATGACGAC--AA-AAAAGCC-CC----------G--TG--ACGTGCAA-CAATTTC-CCAGTT-CTGGA------CATCCT----------------------C-TATTCACA---GGCGTAGAAAATGAC-TCAAAA-TGAGAATAAAC-T----TTGTAT-GAAA-TAA--------AA-GTT-TTGAGAT-TT-GATCTTTCATCTGAAGA--ATCA---AGCAT--AATTTAGG----TATATCTTCAAAACAGTTCA------TAC----TTTATTTACG-TCTCGAAA--AT-GAG-GTGGCT-------TCCTTA--TTTTA----TAATCAGAAA-A--CAA-----GCCTGGCC--G-G--TTTTTGGAATA--TT----AAGCA--ATCCATCTTTTCAAAGAGCTGA-A--AA-AATTCAT-GCT-CTGAGTAAATTATGAAAA-TTGTAGAATTATTTAACAGATA--------------ATCATAATAATATTTTAC--TTAA----TTC-GTACGAAAAG----AT--AAAG--TTTTCACT--CATTTAAACTTTAATTATTCGGAATTGGAAAACAATtcggaactaggcaa
gi|9 : ACCATTTTAA-C--ATTACCA--A-------CA---T---TA--TT--TGAA-CTT-TTTA--TTT---AAATA-TCTCAAGAAATATTTCTTCG-------TAA-AAGTCACGAT-CTAATGTT--CTAGGACGAC--GTTAAAAGACATCT-AT-ATAT-G--AG--CCTTAGATTCAATTGTACCAGTT-CCGAA------TATCCC----------------------C-TAATCCTA---GAGTTA------------TAAT-GAAGAATAAAA-T----TAGGATTGAAA-TG------------GC--------------ATCTTTCATCTGCAGA--ATCA---TGCAT--AATTTATG----CAAATCTTATAAACCATTCA------TATT---ATTAT-CAGA-TCTTGAAA--AT-GAG-GGGACT-------TTCCGA--CTTT-----T--TCATAAA----CAA-----GTATGATG--G-A--TTTTCGGCAAA--TT----GAGCA--CTACATCTTTTTAAGGAACTAA-C--AA-AACTCAT-GCA-CTCAGTAAAATACGAAAA-TCGAAGAATTATGTAAC-GGTGAGAAATTAAAGTTTATTATCATGGCGTTTTAT--TTAATAATTTCGtcggaacaaagaa
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): ATTTAGTTTCGGACATGAAAGAAGACTTAAGCTCTACTTTTCTATTTTCCTCCTATTCATATCACCCATCCTCTTTTCTTTCTCCTTTT
Unaligned ( gi|26 ): AAAACAAACTTTATTCAACATGTATAACATTTAAAGAATGCCAAAGGTGAACGAATATTCCAGGCGACGTGACGTATGATACTG
Unaligned ( gi|30 ): CAGTATTGTTTAAATTGGAGGAAAATGTGTTTTCTGGTTTTCATTTTTACCTATTATTTGA
Unaligned ( gi|31 ): TTACATAATATATTGCTAAGCGGATGGCACAATTTATTCATGAAA