lowQualScore : 11111111111111111111111111111111111111 1111111111111111111111 1111111111 1111111111111111111111111111
lowQualScore : 33 4 1111 1 1 1 11 1111 55555555555 111 777777 1111 111 444444 555555555 1 1 11 1 1 1111 1111 1 111 1111 111 3333 1111 3333333333333333333333333 1111 1 1111 111 1 1 111 5555 111 222222 11111111111111111111111111111111111111 1 1 1111 2222222222 5555555555555 3333333333333333 22222222 555555555555 11 1 2 22 2 22 11 1 0000000000000000000000 11 33333 2222 11 22222 1 11 33 1 1 22222 11 1 1 1111111111 4444444444444444444444444444 1 1 3333333 666666666666666666 111 1111 2222 111 77777 666666666666666666666666666666666 11 1 111 22 1 77777777777 8888888888888888888 111 1 1111 22 111 11111111 1111111 1 8888888888888888888888888888888888888888888 111111 3333333 22222222 22222222222222
lowQualScore : 00 0 3333 3 0 0 0 11 5555 22222222222 99 444 8 5 6 99 6 99 222222 99 9999 6 6 6 33 5 111 000000 444444444 8 1 1 0 3 33 2 8 7 1111 7777 5 7 3 5 2 77 3 8888 222 3 888888888 777 1 3 6 0 2222 000 6 2222 6 2 5555 1 44 3333 2222 5 3 4 7777777777777777777777777 8 8 1 5555 1 8 8 8 5 3 6 4444 6 6 7 0 8 444 0 0 3 8 6 5 88 444 8 0 3 5 3 1 8888 2 333 3 55 333333 8 1 0 3 8 2 2 99999999999999999999999999999999999999 0 3 4 3 1 1 6 8888 1 6 5555555555 6 1 6666666666666 3 33 9999999999999999 00000000 6 777777777777 0 88 3 2 6 0 22 0 44 88 2 5 6 55 1 9999999999999999999999 6 44 44 44444 6 9999 88 22222 5 0 22 33 0 0 55555 00 3 6 0 7 2222222222 2 2 4 8888888888888888888888888888 5 0 8 5 2222222 3 8 555555555555555555 000 99 88 4444 3333 3 6 6 6 6 111 77777 6 1 8 3 000000000000000000000000000000000 11 99 6 6 6 7 2 7 5 5 888 5 00 5 66 7 55555555555 9999999999999999999 5 5 777 1 5 1 0 1 5 5 5 5 0 5 5 0 99 5 2222 33 000 5 88888888 5 777 66 7777777 1 3 1111111111111111111111111111111111111111111 999999 3 6 3 3 9 111111 2 88 6666666 44444444 2 2 66 2 22222222222222 555 3 3 6 44 7777 44 4
lowQualScore : .. . .... . . . . .. .... ........... .. ... . . . .. . .. ...... .. .... . . . .. . ... ...... ......... . . . . . .. . . . .... .... . . . . . .. . .... ... . ......... ... . . . . .... ... . .... . . .... . .. .... .... . . . ......................... . . . .... . . . . . . . .... . . . . . ... . . . . . . .. ... . . . . . . .... . ... . .. ...... . . . . . . . ...................................... . . . . . . . .... . . .......... . . ............. . .. ................ ........ . ............ . .. . . . . .. . .. .. . . . .. . ...................... . .. .. ..... . .... .. ..... . . .. .. . . ..... .. . . . . .......... . . . ............................ . . . . ....... . . .................. ... .. .. .... .... . . . . . ... ..... . . . . ................................. .. .. . . . . . . . . ... . .. . .. . ........... ................... . . ... . . . . . . . . . . . . . .. . .... .. ... . ........ . ... .. ....... . . ........................................... ...... . . . . . ...... . .. ....... ........ . . .. . .............. ... . . . .. .... .. .
lowQualScore : 00 0 5555 2 0 0 0 88 0000 22222222222 00 000 0 0 7 22 0 22 000000 22 7777 7 7 7 55 2 777 000000 666666666 0 4 8 0 0 44 8 0 0 8888 0000 3 8 0 7 4 77 4 6666 777 7 666666666 888 9 0 0 6 1111 000 7 8888 7 5 8888 0 66 4444 7777 7 9 3 3333333333333333333333333 7 7 9 9999 4 0 0 0 0 8 7 2222 0 7 8 8 0 000 2 0 2 2 0 0 66 000 0 8 6 0 2 4 0000 8 888 0 44 000000 0 4 8 8 0 5 0 88888888888888888888888888888888888888 7 3 0 3 0 0 0 3333 0 7 3333333333 0 0 7777777777777 2 88 0000000000000000 00000000 0 555555555555 2 33 3 5 0 0 55 0 00 00 5 5 0 00 0 0000000000000000000000 0 77 33 33333 7 7777 33 77777 0 2 66 88 0 0 00000 88 5 0 0 0 7777777777 5 5 0 0000000000000000000000000000 0 8 0 0 8888888 0 0 444444444444444444 444 44 88 2222 0000 5 3 7 7 7 777 88888 0 7 1 9 666666666666666666666666666666666 77 22 0 7 0 0 2 1 0 0 888 0 88 0 99 0 66666666666 9999999999999999999 7 7 111 6 7 6 7 4 7 7 7 7 7 7 7 9 66 7 4444 66 000 7 11111111 0 888 11 1111111 9 1 2222222222222222222222222222222222222222222 666666 3 0 3 3 1 111111 9 66 7777777 00000000 7 7 33 7 00000000000000 888 3 3 7 66 1111 66 6
consensus : NNNNNATGTGAACAACATTGTCATGGATGAGGACCATAAACCAAAACG-CCTGTGGAGCTTTATCAAAAGCAAA-CGCACGGACGCCTGTGGGG----T--TGCACCA---TTAA-AGAGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA-C----CAGCAA--TTTACATC---NG-TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG----ATATGGGAATTAG-CC---NACATCCAAC-AGTCCCCAACATCACAGTCCAT-CAAGATGGGG-TAGAGAAAC--TCCTACGT----CAGCTCAACCCCCATAAAGCTACAGGCCCGGACGAGGT-CTCATCAAGATTACT---GAAGGAAGC-ATCA----CA---CCAAATAGCTCCAGC---TTTGACACTACTTTTCCAAGCTTCATTAGACCA----AGGCAAGGCCC---CAGA-TGAATGGAAGT-CGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTACCGACCAGTGTC----ACT---G-ACCTNT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACGGCCATATCATTAGCCA-CT-TG-GACAGCCACGGAC-TCCTCACCGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTCGCAAAGAGCCTAGACATAGGGGAG--CAAGTGGACTG-TGTGCTTTTNGACTTCTCC--AAGGCCTTTGATAAAG--TCCCACACAGCCG------ACTA-CTGATGAAACTA-CATCACTACGGCATCAGGGGCCGCACCCATG-CA-GATTGNATCTCAAGTTTCCTTATTGGNCGCACACAACGTGTT-GTNCTC-GATGGTCAATCGTCGTCAGCCGCTACCGTTTCATCAGGAGTCCCTCAGGGAACCGTCCTAGGCC-GCTG-TCTTCCTGATTTTCAT-AAT---GA-CTGTCATCATCAGCGTCTT-GCT-ACCACCA----GACT---GT---CTGATGT-----------ACAGGAGGATCAAGACACC--ACAGG-ANCAGGAGGCTTTGCAGAGCCGACNATCAAATAANACTACAGCAGTGGGAGGANCGATGGCTTATGCAGTTCAACCNNGACAAGTGCGAAGTGC--TACGG---GTA-----T---ACCAANCGGAAATC-CCCA----ATGCTCGCCGAATACAAAATCCACGGCC-AAGTCC--TAA-ACA-CAGTTGACTCTGC-GAAGTACCTTGGC-TT-GACTATT-CATAA-----GAACCTT-AGCNGGGATACGCAC-ATAGATAAGATCACCAAGAAGGCAA-CTCCACTCTNGNCTNCCTCGGCAGAAACATCAGCCGATGCCCAA------------CCACCATC-AAGGCACAGTGCTAAC----TCCACCCTGGT-GCGACCTANC-ATCGAATATGCCT-CCAGCG-TGT-GGAGCCCAGC----CAAGAAN-GAGAACATCAATAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGCCATTG----GAGATTACCAACGCAC-----AAGCAGTGTA------ACATCTA-TATGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-ATT--ATGC-TATAC-AGGATAGTTTAT-CA--GATAGTGGA-----CATCC-GGCGGTGAGC----TACCTA-CAA-CCA-GCA-TCACTGCGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGGCAGCG-TACA-A-GACCT-CCTTCTTCCCCC-AAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AGC-TGTCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTG-T----GTTTT-----TT-------TTTTT---TTA-A----CTTTTT------ATCT-ATTTTA-ACG-TGCACTG------TA-CATA-GATGTTCAC----CA-CCCTC-----A--CACAG-AG-TGCGA--T-AATAC----T--TT-----A---GTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
Reference ( gi|2 ) : AGTAAATGTGAAACACAT-ATCATGGATGAGGACCATAACCCAAAACG-CCTGTGGAGCTTTATGAAAACCAAA-CGCACGGACATCAGTTTGT----T--TGCATCA---TTAA-AGCGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTAAAGGC--AGATATCCTTAA-CCATGCAGCAA--TTTACATC---AG-TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG----A-ATGGGAATTAG-TC---ATTATCCAAC-AGTCCCCATCAGCACAATCCAT-AAAGATGAGG-TTGAGAAAT--TCCTACGT----CAGCTCAACACTCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAGGAAAT-ACCA----CA---CCAAATAGCTCCAGC---TTTGACACTACTTTTCCAGGCTTCATTAGACCA----AGGCAAGGCCC---CAGA-TGAAATGTAGT-CGGCCAACATCACGCCACTATTCAAGAAGGGAGACCGAAGTGCACCAGCCA-ACTATCGACCCGTGTC----ACT---G-ACCTTT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACAGCTCTGTCATTAGCCA-CT-TG-GACAGTCATGGAC-TCCTCACTGATAGCC----AACATGGATTCAGGAA-GCGTCGCCCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTTGTAAAGCGCCTAGACATGGGGGAA--CAAGTGGACTG-TGTACTTTTGGACTTCTCCTTGAGGCCTTCGATAAAG--CCCTACACAACCG------ACTA-CTGATGAAACTA-CATCACTACGGCACCAGGGGCCGCACCCATG-CATGATTGGATCTCGAGTTTTCTTATTGGCCACACACAGCGTGTT-GTACTC-GATGGTCAATCATCATCAGCTACTACCGTTTCATCAGAAGTCCCGCAGGGAACTATCCTAGGCCCACTGTTCTTTCTAATTTTCATCAAC---AACCTGTCATCATCAGTGTCTT--CT-ATCACCA----GACT---GT---CTGGTGA-----------ACAGGAGGATCAAGACACC--ACAGG-ACCAGGAGACTTTGCAGAGC-GACC-TCAA-TAAA-CTACAGCAGTGGGAGGACCGATGGCTTATACAGTTCAACCCGGATAAGTGTGAAGTGC--CAGGA---GT------C---ATCAACTGGAAATT-CCCA----GTGCTCGCCGAATACAAAATCCACGATC-AAGTCC--TAA-ATA-CATTTGACTCTGC-GAAGTACCTTGG--TT-GACTATT-CATAA-----GAACCTT-AGCTGGGATAAGCAC-ATAGATAATATCACCAAGAAGGCA----CCG---TGGCCTTCCTCGGCAGAAAC-------------CAA------------CCACAATC-AAGGCAAAGTGCTT-C----TCTACCCTGGT-GCGACCTAAC-ATCAATTGTGCTT-CCAGTG-TGT-GGAGCCCAGC----CAAGAGG-GAGAACATTAACAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGCCATTGTTCAAAGGTTACCAAAGTAC-----AAGCAGTGTA------ACATCTAATATACTAC-GGCAA--CTCCAGTGACAGTCAC-TCCAACACCGTCGGGAAAGGACCCGAG-TC-ATG--ATGC-TATAG-AGGATAGTTTAT-CA--GAAAGTGGA-----C-----GGCGGTGAGCACTGTATCTA-CA--CCT-GCA-TCACTGCGGACCAGAGGC-CACGCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-A-GACCT-CCTTCTTCCCCC-AAGCCAT-CCGACTT-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGTTCAAGAC---CCTGGA-CAGCTTTAAGAACC----AAT-TGTCC-GGTGCC---GC--CCAGCT-G----TAGACGATTCTGTG-TGG--GTTTT-----TT-------TTTTT---TTA-AA---CTTTTT------ATCT-ATTCTA-ACG-TGCATTG------TA-CATA-AATGTTCAC---ACC-CCCTC-----C--CACAG-AG-TGCGA--T-AATAC----T--TC-----A---GTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
gi|1 : ATGTGAACAACATTATCATGGATGAGGACCA---CCTAA-----CCTGTGGAGCTTTATCAAAAGCAAATCGCACGGATGTCTGTGCATGGGAC--TGCACCA---TTAA-AGAGGGGGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGGTATCCTTA-----TTCAGCAA--TTTACATC---TG-TATT-CA-CCTTGGAGAGCACTACTGCGGAACCACTACCAG----ATATGTGAATTAG-TT------------------CCCAACATCACAGTTCTT-CAAGATGGGG-TAGAGAAAT--CCCCACGT----CAGCTCAAACCCCATAAAGCTACAGGCCCGGACTGGGT-CTCACCAAGATTACT---GAAGGAA-C-ATCT----CA---CCCAATAGCTCCAGC---TT-GACACTACTTTTCCAAACTTCATTAGACCA----AGGCAAGACCC---CAGA-TGAATGGAAGT-TGGCCAACATCACGCCGCTATTCAGGAAGTGAGA-------------ACCA-ACTATCGACCCGTGTC----ACT---G-ACCT---------GTTTACATCAAGGTCATGGAACATATAGTCCACAGCCATATTATTAGTCA-CT-TG-GACAGCCATGGAC-CCCTCACCGATAGCCTGTCAGCATGGATTCAGGAA-GCGTCGTACAACTG-AAA---CCCAATTCATCCTGTCAGTTC-ATGACCTCGCAAAGACCCTAGACATAGGGGAG--CGAGTGGACTG-TGTACTTTTGGACTTCTCC--AAGATCTTTGATAAAG--TCCCACACAGCCGGCCCCGACTA-CTGATGAAACTA-CATCACTACGGCATTAGGAGCCGCAC----A-AATGATTGGATCTCAAATTTCCTTAATGGCTGCACACAGCGTGTT-ATGCTC-GATGGTCAATCGTCATCAGCCGCTGCCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCGGCTGGTCTTCCTGATTGTC-------------TACTACCACCAGACTCTTTGCTGAT---------GATT---GT---CTGATGT-----------ATAGGAGGATCAAGACGCT--ACAGG-ACCAAGAGGCTTTGCAGAGC-GACC-TCAA-TAAT-TTACAGCAGTGGAAGGAGCGATGGCTTATGCAGTTCAACCCGGACAAGTGCGAAGAGC--TACG----GC------CGATACCAACCGGAAATC-CCCATGCAATGCTCGCAGAATACAAAATCCACGGCC-AAGTCC--TAA-ATA-CAGTTGACTCTGC-AGAGTACCTTGG--TTTGACTATT-CATAA-----GAACCTT-CGCAGGGATACGCAC-ATAGATAAGATCCCCAAGAAGGCAAACTCCACTCTGGCCTACCTTGGCAGAAACATCAGCCGATGCCCAA------------CAACCATC-AAGGCACAGTGCTA-C----GCCACCCTGGT-GCGAC-TAACCATCGAATGT--CA-CCAGCG-TGT-GGAGTCTAGC----CAAG----GAGAACATCAATAAACTC-AAG-GCCG-CACAGCGTAGGGCAGCCAG---ATTTGCCATTG----GAGATTACCAACGCAC-----AGGCAGTGTA------AAAT---GTATGCTAC-AACAA--CTCCAGTGGCAGTCAC-TCCAGCTCTGTCGGGGAAGGGCCCAAG-TC-ATT--ATGT-TATAT-AGGATAGTTCAT-CA--GATAGTGGATATCCC-----AGCGGTGAGC----TACCTA-CAA-CCA-GCA-TCACTGAGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGGAAGTG-TATA-A-GACCT-CCTTCTTCCCCCCAAGCCAT-CCGGCTC-AGGAACAAGTT-ACCAGGAGA-AGCAGT--------AGAC---CCTGGA----------AAACC----TGC-TGTCC-GGTGCC---GC--CCAGCT-C----TAGACGACTCGATC-TGT--TTTTTGGTGGTT-------TTTTT---TT
gi|3 : tcaaggagaaaacatcgtgcttttaaacgatactcaaagaccaactccacacgtgattactcgtgctatagagaccttaaaaatgctgtacatgtgcaatgcaagctcagatatgaggagtATGTGAACAACATCGTCATGAATGAGGACCATGGACCAAAACGGTCTGTGGAGCTTTATTAAAAGCAAA-CAAACAGATGCCTGTGGGG----C--TGCTCCG---TTAA-AGAGGGAGGGCATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA-CC---CA-CAA--TTTACATC---CG-TATT-CA-CCTCGGAGAATACT---GCGGAACCACTACCAG----ATATGGGAATTAG-CC---CACATCCAAC-AGTTCCCAACACCACAGTCGAT-CAAGATGGCG-TAGAGAAAC--CCCTACGT----CAGCTCAACCCCCATAAAGCTACAAGTCCGAACAAGGT-CTAATCAAGATTACT---GACGGAAAC-ATCA----CA---ACAAATAGCACCAGC---TTTGACACTACTTTTTCAAGCTTCATTAGACTACTTAAGGCAAGACCC---CAGA-TGAACGGAAGT-CGGCCAACATCATGCCACTATGCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCCGTGTA----ACT---G-ACCTCT-------GTTTGCAACAAGGTCATGGAACTTATAGTCCACAGCCATACCATTAGCCA-CT-TG-GACAGCCATGGAC-TCCTAACTGATAGTC----AGCATGGGTTCAAGAA-GGGTCTCTCAACTG-AAT---CCCAATTCATCCTGTCAGTTC-ATGATCTCGCAAGGGGCCTAGACATAAGGGAG--CAAGTGAACTG-TGTAC----------------------TTCGGTAATG--TCCCACACAACCG------ACTA-CTAATGAggggggggggtgtgtgttttttttttgtgttttttttttggtttttttaaaatgctttttatctaatttaacgtgcactgtacatagatgttcaccaccctcacacagggtgcgataat
gi|6 : cgaagatgacataatagcgttttaaccagctctagatcacaaagaccttcaaagattgtctaggagaaaggatcacgctttttaaaaaaatacccgaagaccaactccacacgttattaatcgtgctataaagaccttgaatactgtacatgtgcaatgcaaactcagatacgaggaatATGTGAACAACATTATCATGGATGAGGATCATAAGCCAAAACG-CTTGTGGAGCTTTATCAAAAGCAAG-CGCACGGATGCCTGTGGGG----T--TGCACCA---TTAA-AGAGGGAGGGTATTACGTACATT-GAC--GCCAGGGTGAAGGC--AGATAGCCGTAA-T----CGGCAA--TTTACATC---TG-TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG----ATATGGGAATTAG-CC---CACATCCAAC-AGTTCCCAACATCACAGTCCAT-AAAGATGGGG-TAGAGAAAC--TCCTACGT----CAGCTCAACCCCCATAAATCTACAGGCCCGGACGAGGT-CTCGTCAAAACT-CT---------------------CA---TGAAATAGCTCCAGC---TTTGACAATACTTTTTCAAGCTTCATTAGACCA----AGACAAGGCCC---CAG
gi|9 : gaaaatgacatcacagcgctttaaccagccctggatcacaagagacctgaaacagttgtctaggagaaaggatcgtgcttttaaacgatactccaagaccaactccacacgtgattactcgtgctataaagaccttaaaaatgctgtacatgtgcaatgcaaactcagatatgaggagtATGTGAACAACATTGTCACGAATGAGGACCATAAACCAAAACG-CCCGTGGAGCTTTATTAAAAGCAAA-TGCACGGACGCCTGTGGGG----T--TGCACCA---TTAA-AGCGGGAAGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA-C----CAGCAA--TTTACATC---TG-TATT-CA-CCTCGGAGATCACA---GCGGAGCCACTACCAG----ATATAGTGATTAGCTC---A-CATCCAAC-AGTCTCCAACATCACAGTCCAT-CAAGATGGGGATAGAGAAAC--TATTACGT----CAGCTCAATCCCCATAAAATTACAGACCCGGACGAGGT-CTCATCAAGATTACT---GAAGGAAGC-ATCA----CA---CCAAATAGCTCCAGC---TTTGACACTAC
gi|13 : tgatacttcaaacggttgtctaggagaaaggatcgtgcttttaaacgatactcgaagaccaagtatgtacgtgattactggtgctataaagaccttttaaaaaatgctgtacatatgcaatgcaaactcagatatgagaagtATGGAGACCGA--TGAACGAACAAAAGCTT-T----TAATAC-TCAGCTTTAATAGCAGATGGGTACTGTCTACAGTTGACCAGCCAAGATGA-GGCCAAGATATTCTTAAGCC---CAGCAAAGTTTACATCGAAAGATATTACAACCTC-------ACT---GCGGTACCACTACCAGCTATA-ATGGAAATTAG-CCCACACAGTCCAACCAGTCCCCATCAGCACAATCCATCAAAAATG-GG-TAGAGAA-TCGTCCTACATACATCAGCTCAGCCCCCATAAAGCTACAGGCCCGAA---------------------------AGAAAGC-GTCA----CA---CCAGATAGCTCCAG
gi|31 : tttgaagaccaactccacaacgtgattaactcgtgttataaagacctaaaaatgctgttaacaaatgtgcagatactggtcagtagtatgtgaacaacatcgatcaatgTACAGC-GAC--GCCAAGATGAAGGC--AGATATCCTTAA-C----CAGGAA--TTTACATC---AG-TATT-CA-CCT-------CACT---GCGGTACCnnnnnnnnnnnnnnnnnnnnnnnnnctactgtctacagcgacgccaagatgaa
gi|17 : tgtcCTGAACTCACACAAAGTCAGCGGACCGGACCAGAT-ATCCACTATGTTTCT---GAAGTCCAT-ATCA----TCTGTCC---TAGCTCCAGCACCTCT--CATCATCTTTC-AAACATCACTCGATGA----AGACCAAGTTC---CTGA-TGA-------C-TGG--AA------ACCATTATTCAAGAAAGGCGACC--AGAGCACC---TA-ACTACAAACCAGTG--------------A------------GTTTAATGCAAGGTTGTCGAACATATCATCCACAGCCAAGTTATCAACCATCT-TGAGACGAACA---ACATCCTCATCAATGATC----AGGATGGTTTTCGAAA-ACGTCG
gi|12 : cAGGTCCTGACGAACTGCTCACCG-GCTTACTCTGAAAAGAAATTACCAATGGTA---TCA--CAACCGCA-C---TT--ACACTTGTCTTCTAAGCTGCAATACACCA----AGA-AAGAACC---CCTA-CAAATTGGAATACAGCTACAATAACACCAATCTTCAAGAAGGGAGACAATAGCAAACCATTTA-ACTATCTTCCAGTGTTTTTAACTCCAGTATCTTTAACTTCAGTATGCTGCAAAGTACTGGAACATGTTATACACAGCTCCATCATGAGGTT-CTCTA-ACCAG-CACAATA-TTATATCTGACATGC----AGCATAGATTCTGCAA-ACAACGATC--CTGCAAATATCTCATCTTATCCTCACCATCCAATG-CCTGGCGAAAGGGATAGACA--ACAAAATCCAAATTGA-TGCTGTGCTCCTCGAATTTTCTT--AGGCGTTTGACAAAGTACCATACCCAG-TG------GCTAGCTAA-AAAAC-A-CAACAC
gi|19 : TTACT---CAAGGGATG-ACCA-----G---TGAAAT---TACA-----CTTG-CACTTCTCTTTCAAGCCTCAATACACCA----AGACAGGACCTAAACAGACTGGAACACAAC-CA--CAATA--ACACCGATCCTCAAGAAGGAAGACaatg
gi|16 : cccgcT---GAGGGAAAT-ATCT----CA---CCAAATAGCCTTAGC---TTTGACACTACTTTTCAAAGCTTCATTAGACCA----ATGCAAGGCCC---CAGA-TGAATGGAAGT-CGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCCA-ACTATCGACCCGTGTC----ACT---G-ACCTCT-------GTTTGCAGCAAGGTCATGGAACATATTGTCCACAGCCATATCATTAGTCA-CT-TG-GACAGCCATGGAC-TCCTCACTGATAGCC----AGCATGGATTCAGGAAGGCATTGCTCAACTG-AAA---CCCAACTCATCCTGTCATTTC-ATGACTTCACACTGAGCCTAGATATAGGGGAG--CAAGTGGACTG-aaca
gi|20 : T---GAAGGAAGC-ATCA----CA---CCAAATAGCTCCAGC---TTTGACACTACT
gi|29 : GAGACCGAAGTTT-CTAGTTA-TCTACCTGCCAGTGTC----AC------ACCCAT-------GT--GCAGTAAGGTCAAGGAAC--ATAGTCCCTGGTCTTTTCATTacgcctcactgatagccagcatggattcaggaagcgtcgctcaactgaaacccaactctaatagatctatcagcgagtgatttgtcaa
gi|28 : GAGACCGAAGTTT-CTAGTTATCCTACTG-CCAGTGTC----AC------ACCCAT-------GT--GCAGTAAGGTCAAGGAAC--ATAGTCCCTGGTCTTTTCATT
gi|20 : AC-GCCTCACTGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTC
gi|4 : tgaaggaagcatcacaccaaatagctccagctttgacactactAAGAGCCTAGACATAGGGGAG--CAGGTAGACTA-TGTGCTTGTGGATTTCTCC--AAGGCCTTTGATAAAG--TCCCACACAACCG------ACTA-CTTATGAAACTG-CATCACTACGGCATCAGGGGCCGCACTCATG-----ATTATATCT-----------ATTGGGAGCACACAACGTGTT-GTACTC-GATGGTCAGTAGTCATCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGACCCGCTGTTCTTCCTAATTTTCATCAAT---GACCTGTCATCATCAGTGTCTT--CT-ACCACCA----GACT---ATTTGCTGATGATTATCTGATGTACAGGAGGATCAAGAAAAC--ACAGGGAACAGGAGGCTTTGCAGAGCCGACAATCAAATAAAACTACAGCAG--GGAGGACCGA-GGCTTATGCAGTTCAACCGCGATAAATGCGAAGTGC--TACGG---GTA-----T---ACCAAGCGGAAATTCCCCA----ATGCCCG-CGAATACAAAATCCACG--CAAAGTCCATTAA-ACACCAGTTGACTCTGCAAAAGTACCTTGGGCTT-GACTATTCCATAA-----GAACCTTCAGCTGGGATACGCACAATAGATACGATCACCAGCAAGGCAATCTCCACTCTCGGCTTCCTCGGCAGAAACATCAG--------CAAGATGCCCAAAACCCACCATCAAAGGCACAGTGCTTACTTCATTTGCTTTGGTGGCGACCC-AC-CTCGAATATGCTTGCCAGCGTTGT-TGAGCCCAGCCACACAAAAAG-GAGAATATTAAGAAACTC-GAGCGCAGTTGCAGCGTAGGGCAGCCAGCATGTTTGCACTTGT--GAAAATTACTCAAGCGCACATAAGGCAGTGTA------ACATC---TATGCTAC-taatagatctatcagcgagtgatttgtcaa
gi|11 : TTTTTGACTTTTCA--AAGGCCTTTAACAAGG--TCCCACACATTCG------ACTG-CTGATAAAGCTA-CATCATTATGACATCCGAGGACGCATCCATGACAAGAT--AA---CAAGTT-----ACAGGGTGTACAGAACGTGTTTGTCCTTTGATAGTCAATCATTGCCCGCTACCATCATTTCATCCAGAGT----CAGGAAAACAT-TTA----------TCTTCTTGATGTACATAAATGAGAAATTGTC-TCATCAACCACTCGACT-ATTTGCAAGACGACT---GT---CTTATGC-----------ACAGAAGGACCAGGTCATCTTATAGG-
gi|14 : aAACCAGCATCACTGCGG-GCCAGAGGCCACTCCC-TG-CA--A-------------TTTCTTGTT--CCACACACgataactcaaaaagctccaacagtgattaatggagaatcaagtgcacaaaagagtccccactacttgttggctagcttatccatggccatgtactttttatgatcaactgtgttaaatacctccacttcacctttcacaggagcatcggctgagatatgaacatagacgatatcaccaagaaggcaaacgccacttt
gi|37 : agattactaacgcacaagtagtgtaacatctatgctacagcaactccagtggcagtcactccagctccgtcgggaaagggcccaagtcattatgctatagaggatagtttatcagatagtggacatcccggtggtgagctacctacATCTTCAGTGTCTT--CT-ACCACTA----GACTATTGT---CTGATGT-----------ACAGGAGGATCAAGACACcaggacggaagtgtacaaaatctccttcctccccaaagccatccggccctggaacaaattaccagggggtgcagtggagggcaagaccctggacagctttaagaaccagctgtccggtgccgcccagctgtacatagacgactctgtgttattttttttttatctattttaacttgcactgtacatagatgttcactaccctcacacagagtgtgataatacttattagtggtaatgcactaaaccggaagaagaa
gi|25 : TGTAAAGTGCTACGGGACAAGTACGGGAT---ACCAATTGGAAATC-TCCA----ATGGTCGCCAAATACAAAATCCACAGCC-AAGTCC--GAAGGCC-CAGTTGACTTTGC-AAA
gi|11 : tACTGTGT-TAAATACCTCCAC-TT-CACCTTT-CACAG-----GAGCATC-GGCTGAGATATGAAC-ATAGACGATATCACCAAGAAGGCA----
gi|36 : atttttgacttttcaaaggcctttaacaaggtcccacacattcgactgctgataaagctacatcattatgacatccgaggacgcatccatgacaagataacaagttacagggtgtacagaacgtgtttgtcctttgatagtcaatcattgcccgctaccatcatttcatccagagtcaggaaaacatttatcttcttgatgtacataaatgagaaattgtctcatcaaccactcgactatttgcaagacgactgtcttatgcacagaaggaccaggtcatcttatagggataactcaaaaagctccaacagtgattaatggagaatcaagtgcacaaaagagtccccactacttgttggctagcttatccatggccatgtactttttatgatcaTGC-GAAGTACCTTGGC-TT-GACTATT-CATAATTTAAGAACCTT-AGCGGGGATATGCAC-ATaacgccacttt
gi|5 : CCTCGACAGAAACATCAGCCAATGCCCAA------------CCACCATC-GAGGCACTGTGCTA-T----TCCACGCTAGT-GCGACCCACC-ATTGAATATGCCT-CCAGCG-TGT-GGAGCCC-GA----CAAGAAA-GAGAACATCAACAAACTC-GAG-GCCA-TACAGCGTAGGGCAGTTAG---ATTCGCCATCG----AAGATTATCAAAGTAC-----AAGCAGTGTACTGTAAACATCTA---T-CTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-ATT--ATGC-TATAC-AGGATAGTTTAT-CA--GATAGTGGACATCCC-----GGCGGTGAGC----TA-CTA-CAG-CAA-GCA-TCACTGCGGATCAGAGGC-CACTCCCTGCGATTT-CTTAACCCACACACCAGGACGACGGTG-TACA-AGGACC-----CCTTCCCCC-AAG-------G---T-CAGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACCAGCTAGC-TGTCC-GGTGCC---GC--CCAGC
gi|7 : C-------------CAA------------CCACCATC-AAGGCACAGTGCTA-C----TCCACCCTGAT-GCGACCTACC-ATT------------CAGCA-TGT-AGAGCCCAGC----CAAGAAT--AGAACATCAATAAACTC-GAG-GCCG-TATTGTGTAGGGCAGCCAG---ATTCGCCATTG----GAGATTAACAACGCAC-----------------------------TATGCTAC-AGCAA--CTCCAATGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGACCAAG-TC-ATT--ATGC-TATAC-AGGATAGTTAAT-CA--GATAGTGGA-----CATCCAGGCGGTGAGC----TACCTT-CAA-CCA-GCT-TCACTGTGGACCAGAGAC-C-----------------------ACACACCAGGACGACAGCG-AACA-A-GACCT-CCTTCTTCCCCC-AAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGAA----GTAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AGC-TGTCA-GGTGCC---AC--CCAAC-------TAG-----TGTGTT-TGGTTGTTTT-----TTAAATTAATTTTT---TT--------TTTTA------ATCT-ATTTTA-ACG-TGCACTGTACATATA-CATA-GATGTTCAC----CA-CCCTC-----A--CACAA-AG-TGCGA--T-cttttggttttaagaaaaaaaaaaaaaaaccggaccttccctgtaaaatgttttaaacttatctactttaacgtgcaccgtacatagatgtttacc
gi|8 : tgggcagaaacatcagccgatcgatgcAA------------CCACCA-C-AAGGCACAGTGCTTAC----TCCACCCTGAT-GCGACCTA----CCAATT--------CAGCA-TGTTAGAGCC--AT----CAAGAAT-ATGAACATCAATAAACTCCGAG-GCCG-TACTGTGTAGGGCAGCCA----ATTCCCCATTG----GAGATTAC-AACGCAC-----------------------------TATGCTACCAGCAAACTTCCAAGGGCAGTCACGTCCAGCTCCGTCGGAAAGGGACC--AA-TCGATT--ATGC-TATACCAGAATAATTAAT-CAAAGATAGTGGA-----CATCCAGGCGGTGAGTAC-----CTG-CAAACCA-GCT-TCACT-TGGACCA-AGAC-C----------------------CACACACCAGGACGACAGCGACACA-A-GACCT-CCTTCTTCCCCC-AAGCCAT-CCGGCTCATGGAACAAGTT-ACCAGAA----GTAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AGTCTGTTCAGGTGCC---AC--CCAAC-------TAG-------TGTGTTTG--GTTGT-----TT-------TTTTTAAATTA-AT---TTTTTTTTATTAATCT-ATTTTA-ACG-TGCACTGT-----TA-CATA-GATGTTCAC----CA-CCCTC-----A--CACAA-AG-TGCGAT-T-AATtaa
gi|10 : agcatcgcgatcgatgcccaGC----CAAAAAATGAGAATATCAAGAAACTC-GAG-GCCG-TGCAGCGTAGGGCAGCCAG---A-----------------ATTACCAACGCAC-----AAGCAGTGTA------ACATCTA---TGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-ATT--ATGC-TATAC-AGGATAGTTTAT-CA--GATAGTGGA-----CATCCCGGCGGTGAGC----TACCTA-CA--ACAAGCA-TCACTGCGGAACAGTAGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGGAAGTG-TACA-A-GACCT-CCTTCTTACCCC-AAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AGC-TGTCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTG-T-----TATT-----TT-------T-----------------TTTTT------ATCT-ATTTTA-ACG-TGCACTG------TA-GATA-GATGTTCAC----TA-CCCTC-----A--CACAG-AG-TGTGA--T-AATAC----T--TTTTAAAA---GTGGT-AA-T-GCACT--A----A--ACCGGGAGAAGA
gi|14 : AGATTACTAACGCAC-----AAGTAGTGTA------ACATCTA---TGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-ATT--ATGC-TATAG-AGGATAGTTTAT-CA--GATAGTGGA-----CATCCCGGTGGTGAGC----TACCTA-CAA-CCA-GCA-TCACTGCGGGCCAGAGGC-CACTCCCTGCAATTT-CTTGTTCCACACACCAGGACGGAAGTG-TACA-A-AATCT-CCTTCCTCCCCA-AAGCCAT-CCGGCCC-TGGAACAAATT-ACCAGGGGG-TGCAGTGGAGGGCAAGAC---CCTGGA-CAGCTTTAAGAACC----AGC-TGTCC-GGTGCC---GC--CCAGCT-GTACATAGACGACTCTGTG-T-----TATT-----TT-------T-----------------TTTTT------ATCT-ATTTTA-ACT-TGCACTG------TA-CATA-GATGTTCAC----TA-CCCTC-----A--CACAG-AG-TGTGA--T-AATAC----TTATT-----A---GTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
gi|35 : CCGTCGAGGAAGGGCCCAAG-TT-ATT--ATGC-TGTAC-AGGATAGTTTAT-CA--GATAGTGGA-----C-----a
gi|15 : tAAGGACCCAAGGTC-ATGTAATGCATATAACAGGATAGTTTATGCA--GATAGTGAA-----CATCC-GG-GGTGAGC----TACCTAACAA-CCA-GCAATCACTGCGAACCAGAGGCACACTCCCTGCGTTTTTCTTGTTCCACACACCAGGACGACAGTG-TACATA-GACCTGCCTTCTT-CCCC-AAGCCATCCCGGCTC-TGGAACAAGTTGACCAGGGGGCCGCAGTGGAGGCCAAGACCTGCTTGGATCAGCTTTAAGAACC----AGT-GTTCC-GGTGCCTATGCCTCCAGTTGG----TAGAAAA--CTG-------------------T-------TATTT---TTA-GC---TTTTTT------ATCTAATTTTACACG-TGCA-CG------CA-CATA-GATGTTCACCCAACC-TCAAC-----A--CACAGAAA-TGCGA--TGAATACATTAT--TA-----A---GT-GT-AA-TGGCACTAAA----A--ACCGGAAGAAGatc
gi|18 : TTAAGAACC----AGC-TGTCC-GGTGCC---GT--CCGGCT-G----TA-ACGA--CTATG-T----GTTAT-----TT-------TGCTT---TTA---------------------T-ATTTTA-ACGTTGCACTG------TA-CATAGAATGTTCCC---A---CCCTC-----A--CACAG-AG-TGCGA--T-AATAC----T--TTTTAA-A---GTGGT-AA-T-GCA----A----A--A---GAAGAAGA
gi|21 : TGCC---GC--CCGGAT-G----TAGACGACTCTGTA---G--GCTTT-----TT-------ATTT--------AC---CTTTTT------ATCT-GTTTTA-ACA-TGCACTG------TA-CATA-GCTGTTCAC----CA-ACCTC-----A--CAAAG-AG-TGT----T-AATA---------T-----A---G-----AA-T-GCGCT--A----A--A-CGGAAGaga
gi|38 : ----TAGACGACTCTGTG-T------------------------TATT---TTATAA---CTTTTT------ATCT-ATTTTA-ACA-TGCACTG------TA-CAT
gi|1 : TTTTGTG-TT----TTTT-----TTTTGG---TTTTT---TTA-AAATGCTTTTT------ATCT-AATTTA-ACG-TGCACTG------TA-CATA-GATGTTCAC----CA-CCCTC-----A--CACAG-GG-TGCGA--T-AAT
gi|24 : tcaaggagaaaacatcgtgcttttaaacgatactcaaagaccaactccacacgtgattactcgtgctatagagaccttaaaaatgctgtacatgtgcaatgcaagctcagatatgaggagtatgtgaacaacattatcatggatgaggaccacctaacctgtggagctttatcaaaagcaaatcgcacggatgtctgtgcatgggactgcaccattaaagagggggggtattgcgtacagtgacgccagggtgaaggcaggtatccttattcagcaatttacatctgtattcaccttggagagcactactgcggaaccactaccagatatgtgaattagttcccaacatcacagttcttcaagatggggtagagaaatccccacgtcagctcaaaccccataaagctacaggcccggactgggtctcaccaagattactgaaggaacatctcacccaatagctccagcttgacactacttttccaaacttcattagaccaaggcaagaccccagatgaatggaagttggccaacatcacgccgctattcaggaagtgagaaccaactatcgacccgtgtcactgacctgtttacatcaaggtcatggaacatatagtccacagccatattattagtcacttggacagccatggacccctcaccgatagcctgtcagcatggattcaggaagcgtcgtacaactgaaacccaattcatcctgtcagttcatgacctcgcaaagaccctagacataggggagcgagtggactgtgtacttttggacttctccaagatctttgataaagtcccacacagccggccccgactactgatgaaactacatcactacggcattaggagccgcacaaatgattggatctcaaatttccttaatggctgcacacagcgtgttatgctcgatggtcaatcgtcatcagccgctgccgtttcatcaggagtccctcagggaactgtcctaggccggctggtcttcctgattgtctactaccaccagactctttgctgatgattgtctgatgtataggaggatcaagacgctacaggaccaagaggctttgcagagcgacctcaataatttacagcagtggaaggagcgatggcttatgcagttcaacccggacaagtgcgaagagctacggccgataccaaccggaaatccccatgcaatgctcgcagaatacaaaatccacggccaagtcctaaatacagttgactctgcagagtaccttggtttgactattcataagaaccttcgcagggatacgcacatagataagatccccaagaaggcaaactccactctggcctaccttggcagaaacatcagccgatgcccaacaaccatcaaggcacagtgctacgccaccctggtgcgactaaccatcgaatgtcaccagcgtgtggagtctagccaaggagaacatcaataaactcaaggccgcacagcgtagggcagccagatttgccattggagattaccaacgcacaggcagtgtaaaatgtatgctacaacaactccagtggcagtcactccagctctgtcggggaagggcccaagtcattatgttatataggatagttcatcagatagtggatatcccagcggtgagctacctacaaccagcatcactgaggaccagaggccactccctgcgatttcttgttccacacaccaggacggaagtgtataagacctccttcttccccccaagccatccggctcaggaacaagttaccaggagaagcagtagaccctggaaaacctgctgtccggtgccgcccagctctagacgactcgatctgttttttggtggtttttttttggggggggggtgtgtgttttttT-------TATTT---TTA-G----CTTTTT------ATCT-ACTTTA-AAG-TGCACTG------TA-CATA-GATGTTCAC-----C-ACCTC-----A--AAAAG-AG-TGCGA--T-AATAC----T--TA-----A---GTGGT-AA-T-GCACT--A----A--ACCGGAAGAAG
gi|5 : tataTT---TTA-AA---CTT---------ATCT-ACTTTA-ACG-TGCACCG------TA-CATA-GATGTTTAC---
gi|26 : cctcgacagaaacatcagccaatgcccaaccaccatcgaggcactgtgctattccacgctagtgcgacccaccattgaatatgcctccagcgtgtggagcccgacaagaaagagaacatcaacaaactcgaggccatacagcgtagggcagttagattcgccatcgaagattatcaaagtacaagcagtgtactgtaaacatctatctacagcaactccagtggcagtcactccagctccgtcgggaaagggcccaagtcattatgctatacaggatagtttatcagatagtggacatcccggcggtgagctactacagcaagcatcactgcggatcagaggccactccctgcgatttcttaacccacacaccaggacgacggtgtacaaggaccccttcccccaaggtcagaacaagttaccagggggcgcagtggaggccaagaccctggacagctttaagaaccagctagctgtccggtgccgcccagccttttggttttaagaaaaaaaaaaaaaaaccggaccttccctgtaaaatgTTTTT------ATCT-ATTTTA-ACT-TACACTG------TA-CATA-GATGTT-AA---ATA-CCCTC-----A--CACAG-AA-TGCGA--T-AATACT---T--TT-----A---GTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGAc
gi|30 : gttaGCAGTG------TAACATC-TATGCT------ACCACCCTC-----A--CACAA-AG-TGCGA--T-AATAC----T--TT-----AAAAGTGGT-AA-T-GCATT--A----A--ACCGGAAGA
gi|27 : ACTG------TA-C-TA-GATGTTT-C---ACC-CCCACAAACACAACACAG-AGATGCGAACT-AGAAC----T--TC-----A---GTGGT-AAATAGCACT--A----A--AGCGGAAGAAGAtg
gi|34 : ATA-GATGTTCAC----CA-CCCTC-----A--CACAG-AA-TGCAA--T-AATAC----T--TT-----A---AAAGTAAA-T-GCACT--A----A--ACCAGAAGAAGg
gi|33 : ATGTCCAC----CA-CCCTC-----A--CACAG-AG-TGTGA--T-AATAC----T--TA-----A---ATGAT-AA-T-GCACT--ACTGTAACACCGGAAGAAGA
gi|39 : g--CAAAG-AG-TGCAA--T-AATGC----T--TC-----A---GTGGT-GA-T-GCA----A----A--A---GAAAAAGAag
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|22 ): ATGGCTTTTACAAAAACAATCCTGTGATTTCCAACTTATTCACACCATTCAAACCTGGACTGGTACTGACAACTCTTCAAAGATGGATGCCATCTTACTCGATATCTCCAAGGCGTTCGACGAG
Unaligned ( gi|23 ): CACAGCTCCATCATTCGATCACAATGATCTATCTGACATGCAGCATGGTTTCCGCAAACAACGATCCTGCGAATCTCAACTCAGTTATCCTCACCATCCACGGCCTGGCGAAAG
Unaligned ( gi|32 ): CAGCGCTTTAACCAGCCCTGGATCACAAGATACCTGAAACGGTTGTATAGGAGAAAGGATCGTGCTTTTAAACGAT
Unaligned ( gi|40 ): CCAGTATAATTAACTTCTGTACATGCAAATTACTGGAACATGTCATATGCA
Alignments
lowQualScore : 111 11111 1111 1111 1111 111 111 1111 1111111 1111 1111 2222222222222222222 1 1111 1111 111 1111 22222222 555555 2222222222 1 1 33333333333 66666666666 22 1111 555555555555555555 11 1 2 22222 22 666666666666666 1111 11 11111 22222 2222 111 1111 111 22 1111 22222222222 1111 111 11111 11111 2222222222222222 2 1111 111111 3333333333333333333333333333333333333 1111111 111111 222222
lowQualScore : 888 6 1 111 2 6 66666 3 6 7777 0 5 77 77 77 2222 77 1 2222 5 5 0 3 000 99 6 1 3 111 6 1 6 6 4444 1 5 1 11 3 777 777 9 1 3333333 777 1 0000 5 5 5 22 0 11 444 444 5 2 3 0000 0000000000000000000 6 6 0 2 3 1 1 5 6 1 2222 1 2222 5 6 111 8 0 6 6 6 1 3 2222 99 22222222 6 0 0 000000 444 3 7777777777 1 55 0 1 0 2 2 3 2 2 22222222222 3 33333333333 2 0 4 8 88 6 3 7777 222222222222222222 33 0 1 3 99999 11 6 1 7 22 0 000000000000000 1 8 7777 3 3 11 00000 88 8 3 8 00000 8 1 1 8 2 4444 3 2 0 1 1 1 3 888 4444 888 6 77 4444 6 0 1 88888888888 6 6 44 2222 88 2 5 5 5 000 5 5 22222 5 5 22222 0000000000000000 5 77 5 4 4 4 4 4 666 4 66 4 5 0000 5 5 5 5 3 0 5 0 5 5 5 77 5 5 5 777 888 5 9999 4 4 4 777 55 000000 1 0 0000000000000000000000000000000000000 8888888 3 3 2 000000 2 2 2 2 2 444 8888888 2 2 55 2 9999 44 000000 3 3 6 44 6666 44 3
lowQualScore : ... . . ... . . ..... . . .... . . .. .. .. .... .. . .... . . . . ... .. . . . ... . . . . .... . . . .. . ... ... . . ....... ... . .... . . . .. . .. ... ... . . . .... ................... . . . . . . . . . . .... . .... . . ... . . . . . . . .... .. ........ . . . ...... ... . .......... . .. . . . . . . . . ........... . ........... . . . . .. . . .... .................. .. . . . ..... .. . . . .. . ............... . . .... . . .. ..... .. . . . ..... . . . . . .... . . . . . . . ... .... ... . .. .... . . . ........... . . .. .... .. . . . . ... . . ..... . . ..... ................ . .. . . . . . . ... . .. . . .... . . . . . . . . . . . .. . . . ... ... . .... . . . ... .. ...... . . ..................................... ....... . . . ...... . . . . . ... ....... . . .. . .... .. ...... . . . .. .... .. .
lowQualScore : 888 7 5 777 5 7 77777 7 7 0000 6 7 99 99 99 1111 99 0 1111 7 7 7 0 000 22 7 0 3 777 7 5 7 7 2222 4 0 0 11 4 000 000 8 2 0000000 888 4 6666 7 7 4 00 7 66 999 999 0 2 0 6666 4444444444444444444 5 5 5 0 5 2 4 7 6 7 1111 4 1111 7 7 777 0 8 7 7 4 5 3 0000 22 33333333 7 8 2 555555 555 2 8888888888 2 22 0 0 0 0 0 2 0 5 00000000000 2 55555555555 5 8 6 0 00 4 2 0000 000000000000000000 88 0 0 3 33333 33 7 0 3 00 7 222222222222222 0 0 0000 2 2 00 66666 88 0 2 0 00000 0 0 4 0 5 2222 0 5 2 0 0 0 2 333 2222 333 7 77 2222 7 3 0 33333333333 7 7 22 1111 77 1 7 7 7 000 7 7 66666 0 0 88888 6666666666666666 0 99 7 4 4 4 4 4 222 4 11 4 0 6666 0 0 0 0 1 2 0 2 0 0 0 55 0 0 0 888 888 0 4444 4 4 4 000 55 333333 6 5 2222222222222222222222222222222222222 8888888 1 1 9 333333 7 5 5 5 5 777 1111111 5 5 99 5 6666 22 111111 1 1 2 22 5555 22 5
consensus : NNNNNATGTGAACAACATCG-TCATGGATGAGGACC-ATAAAC---CAAAACG-CCTGTGG-----AGCTTTATCAAAAGCAAA-CGCACGGACGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCNG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTCCCCAACATCACAGTCCATCAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAAGCTTCATTAGAC----CAAGGCAAGGCCCCAGAC-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCNGTGTC----ACT---G-ACCTNT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACGGCCNTATCATTAGCCA-CT-TGGACAGCCACGGAC----TCCTCACCGATAGC----CAGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTCGCAAAGAGCCTAGACATAGGGGA-GCAAGTGGACTG-TGTGCTTTTGGACTTCTCC--GAGGCCTTTGATAAAGTCCCACA--CAA------CCGACTA-CTGATGAAACTACATCACTACGGCATCAGGGGCCGCACCCATG-C-A-GATTGGATCTCGAGTTTCCTTATTGGNCGCACACAGCGTG-TTGTAC-TCGATGGTCAATCGTCGTCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCC-GCT-GTTCTTCCTGATTTTCATCAACG----ACCTGTCATCATCAGTGTC-TTG-CTACCACCA----GAC--------------T---GTCTGATGTACAGGAGGATCAAGACACC--ACA-GGACCAGGAGGCTTTGCAGAG-CGACC-TC-AATAA-ACTACAGCAGTGGGAGGACCGATGGCTTATGCAGTTCAACCCGGATAAGTGCGAAGTGCTACGG--G-----TA-----TACCAACCGGAAA-TCCC----CAATGCTCGCCGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-GAAGTACCTT-GGCTTGACTATT-CA-----TAAGAACCTT-AGCTGGGATACGCAC-ATAGATAANATCACCAAGAAGGCAAA-CTCCACTCTGGCCTTCCTCGGCAGAAACATCAGC---CGAT----GCCCAA---CCACCATC-AAGGCACAGTGCT-ACTCCA----CCCTGGT-GCGACCTACCATCGA-TATGCCT-CCAGCG-TGT-GGAGCCCAGC----CAAGAAN-GAGAACATCAANAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-ATATGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACAT-CCCGGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTGT---GTTT--TT-T-----TTTTT---TT-AA----C-TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--TT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
Reference ( family-301 ) : NNNNNATGTGAACAACATTG-TCATGGATGAGGACC-ATAAAC---CAAAACG-CCTGTGG-----AGCTTTATCAAAAGCAAA-CGCACGGACGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCNG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCNACA---TCCAAC-AGTCCCCAACATCACAGTCCATCAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAAGCTACAGGCCCGGACGAGGT-CTCATCAAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAAGCTTCATTAGAC----CAAGGCAAGGCCCCAGAT-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTACCGACCAGTGTC----ACT---G-ACCTNT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACGGCCATATCATTAGCCA-CT-TGGACAGCCACGGAC----TCCTCACCGATAGC----CAGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTCGCAAAGAGCCTAGACATAGGGGA-GCAAGTGGACTG-TGTGCTTTTNGACTTCTCC--AAGGCCTTTGATAAAGTCCCACA--CAG------CCGACTA-CTGATGAAACTACATCACTACGGCATCAGGGGCCGCACCCATG-C-A-GATTGNATCTCAAGTTTCCTTATTGGNCGCACACAACGTG-TTGTNC-TCGATGGTCAATCGTCGTCAGCCGCTACCGTTTCATCAGGAGTCCCTCAGGGAACCGTCCTAGG-CC-GCT-G-TCTTCCTGATTTTCAT-AATG----A-CTGTCATCATCAGCGTC-TTG-CTACCACCA----GAC--------------T---GTCTGATGTACAGGAGGATCAAGACACC--ACA-GGANCAGGAGGCTTTGCAGAGCCGACNATCAAATAANACTACAGCAGTGGGAGGANCGATGGCTTATGCAGTTCAACCNNGACAAGTGCGAAGTGCTACGG--G-----TA-----TACCAANCGGAAA-TCCC----CAATGCTCGCCGAATACAAAATCCACGGCCAAGTCC--TAA-ACA-CAGTTGACTCTGC-GAAGTACCTT-GGCTTGACTATT-CA-----TAAGAACCTT-AGCNGGGATACGCAC-ATAGATAAGATCACCAAGAAGGC-AA-CTCCACTCTNGNCTNCCTCGGCAGAAACATCAGC---CGAT----GCCCAA---CCACCATC-AAGGCACAGTGCTAACTCCA----CCCTGGT-GCGACCTANCATCGAATATGCCT-CCAGCG-TGT-GGAGCCCAGC----CAAGAAN-GAGAACATCAATAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-ATATGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACAT-CC-GGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGGCAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTGT---GTTT--TT-T-----TTTTT---TT-AA----C-TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--TT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
gi|1 : ATGTGAACAACATTA-TCATGGATGAGGACC-A----C---CTAA----CCTGTGG-----AGCTTTATCAAAAGCAAATCGCACGGATGTCTGTGCATGGGACTGCACCATTAAAGAGGGGGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGGTATCCTTAT--TCA----GCAA--TTTACATCTG----TATT-CA-CCTTGGAGAGCACTACTGCGGAACCACTACCAG--ATA-TGTGAATTAG------------------TTCCCAACATCACAGTTCTTCAAGATGGGG-TAGAGAAAT-CCCCACGT----CAGCTCAAACCCCATAAAGCTACAGGCCCGGACTGGGT-CTCACCAAGATTACT---GAAG---GAA-CATCTCACCCA-------ATAGCTCCAGC----TTGACACTACTTTTCCAAACTTCATTAGAC----CAAGGCAAGACCCCAGAT-GAAT-GGAAGTTGGCCAACATCACGCCGCTATTCAGGAAGTGAGA---------ACC----A-ACTATCGACCCGTGTC----ACT---G-ACC--T-------GTTTACATCAAGGTCATGGAACATATAGTCCACAGCCATATTATTAGTCA-CT-TGGACAGCCATGGAC----CCCTCACCGATAGCCTGTCAGCATGGATTCAGGAA-GCGTCGTACAACTG-AAA---CCCAATTCATCCTGTCAGTTC-ATGACCTCGCAAAGACCCTAGACATAGGGGA-GCGAGTGGACTG-TGTACTTTTGGACTTCTCC--AAGATCTTTGATAAAGTCCCACA--CAGCCGGCCCCGACTA-CTGATGAAACTACATCACTACGGCATTAGGAGCCGCACAAAT------GATTGGATCTCAAATTTCCTTAATGGCTGCACACAGCGTG-TTATGC-TCGATGGTCAATCGTCATCAGCCGCTGCCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGG-CCGGCTGG-TCTTCCTGATTGTC-T---------A-CT---ACCACCAGACTCTTTG-CTG--AT------GAT--------------T---GTCTGATGTATAGGAGGATCAAGACGCT--ACA-GGACCAAGAGGCTTTGCAGAG-CGACC-TC-AATAAT-TTACAGCAGTGGAAGGAGCGATGGCTTATGCAGTTCAACCCGGACAAGTGCGAAGAGCTACGGCCG------A-----TACCAACCGGAAA-TCCCCATGCAATGCTCGCAGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-AGAGTACCTT-GGTTTGACTATT-CA-----TAAGAACCTT-CGCAGGGATACGCAC-ATAGATAAGATCCCCAAGAAGGCAAA-CTCCACTCTGGCCTACCTTGGCAGAAACATCAGC---CGAT----GCCCAA---CAACCATC-AAGGCACAGTGCT-ACGCCA----CCCTGGT-GCGACTAACCATCGA--ATGTCA-CCAGCG-TGT-GGAGTCTAGC----CAAG----GAGAACATCAATAAACTC-AAG-GCCG-CACAGCGTAGGGCAGCCAG---ATTTGC-CAT-TG----GAGATTAC-CAA-CGCAC---AGGCAGTGTA------AAA--T-GTATGCTAC-AACAA--CTCCAGTGGCAGTCAC-TCCAGCTCTGTCGGGGAAGGGCCCAAG-TC-AT-TA-TGT-TATA-T-AGGATAGTTCAT-CA--GATAGTGGATATCCC-AGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGAGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGGAAGTG-TATA-AGACCT-CCTTCTTCCCCCCAAGCCAT-CCGGCTC-AGGAACAAGTT-ACCAGGAGA-AGCAGT--------AGAC---CCTGG----------AAAACC----TG-CTG-TCC-GGTGCC---GC--CCAGCT-C----TAGACGACTCGATCT---GTTT--TT-TGGTGGTTTTT---TT-
gi|1 : tcaaggagaaaacatcgtgcttttaaacgatactcaaagaccaactccacacgtgattactcgtgctatagagaccttaaaaatgctgtacatgtgcaatgcaagctcagatatgaggagtTTTGTGT---TTTT--TT-TTTGG-TTTTT---TT-AAAATGC-TTTTT-------ATCT-AATTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-GG-TGCGA--T-AATttggggggggggtgtgtgttttttttttgtgttttttttttggtttttttaaaatgctttttatctaatttaacgtgcactgtacatagatgttcaccaccctcacacagggtgcgataat
gi|10 : tcaaggagaaaacatcgtgcttttaaacgatactcaaagaccaactccacacgtgattactcgtgctatagagaccttaaaaatgctgtacatgtgcaatgcaagctcagatatgaggagtatgtgaacaacattatcatggatgaggaccacctaacctgtggagctttatcaaaagcaaatcgcacggatgtctgtgcatgggactgcaccattaaagagggggggtattgcgtacagtgacgccagggtgaaggcaggtatccttattcagcaatttacatctgtattcaccttggagagcactactgcggaaccactaccagatatgtgaattagttcccaacatcacagttcttcaagatggggtagagaaatccccacgtcagctcaaaccccataaagctacaggcccggactgggtctcaccaagattactgaaggaacatctcacccaatagctccagcttgacactacttttccaaacttcattagaccaaggcaagaccccagatgaatggaagttggccaacatcacgccgctattcaggaagtgagaaccaactatcgacccgtgtcactgacctgtttacatcaaggtcatggaacatatagtccacagccatattattagtcacttggacagccatggacccctcaccgatagcctgtcagcatggattcaggaagcgtcgtacaactgaaacccaattcatcctgtcagttcatgacctcgcaaagaccctagacataggggagcgagtggactgtgtacttttggacttctccaagatctttgataaagtcccacacagccggccccgactactgatgaaactacatcactacggcattaggagccgcacaaatgattggatctcaaatttccttaatggctgcacacagcgtgttatgctcgatggtcaatcgtcatcagccgctgccgtttcatcaggagtccctcagggaactgtcctaggccggctggtcttcctgattgtctactaccaccagactctttgctgatgattgtctgatgtataggaggatcaagacgctacaggaccaagaggctttgcagagcgacctcaataatttacagcagtggaaggagcgatggcttatgcagttcaacccggacaagtgcgaagagctacggccgataccaaccggaaatccccatgcaatgctcgcagaatacaaaatccacggccaagtcctaaatacagttgactctgcagagtaccttggtttgactattcataagaaccttcgcagggatacgcacatagataagatccccaagaaggcaaactccactctggcctaccttggcagaaacatcagccgatgcccaacaaccatcaaggcacagtgctacgccaccctggtgcgactaaccatcgaatgtcaccagcgtgtggagtctagccaaggagaacatcaataaactcaaggccgcacagcgtagggcagccagatttgccattggagattaccaacgcacaggcagtgtaaaatgtatgctacaacaactccagtggcagtcactccagctctgtcggggaagggcccaagtcattatgttatataggatagttcatcagatagtggatatcccagcggtgagctacctacaaccagcatcactgaggaccagaggccactccctgcgatttcttgttccacacaccaggacggaagtgtataagacctccttcttccccccaagccatccggctcaggaacaagttaccaggagaagcagtagaccctggaaaacctgctgtccggtgccgcccagctctagacgactcgatctgttttttggtggtttttttttggggggggggtgtgtgtttttttGC----CAAAAAATGAGAATATCAAGAAACTC-GAG-GCCG-TGCAGCGTAGGGCAGCCAG---A-------------------ATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-AT--GCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACAT-CCCGGCGGTGAGC----TACCTA-CAA-CAAGCA-TCACTGCGGAACAGTAGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGGAAGTG-TACA-AGACCT-CCTTCTT-ACCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTGT----TAT--TT-T-----T------------------TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-GATAG-ATGTT-CA-C-TACCCT---CA-------CACAG-AG-TGTGA--T-AATAC----T--TTTTAAAAGTGGT-AA-T-GCACT--A----A--ACCGGGAGAAGA
gi|11 : TTTTTGACTTTTCA--AAGGCCTTTAACAAGGTCCCACA--CAT------TCGACTG-CTGATAAAGCTACATCATTATGACATCCGAGGACGCATCCATGACAA-GAT--AA---CAAG-----TTACAGGGTGTACAGAACGTGTTTGTCCTTTGATAGTCAATCATTGCCCGCTACCATCATTTCATCCAGAG----TCAGGAAAACAT-----------TT-A-TCTTCTTGATGTACATAAATGAGAAA-TTGTC-TCATCAACCAC-TCGACTATTTGCAAGACGAC--------------T---GTCTTATGCACAGAAGGACCAGGTCATCTTATA-GG
gi|11 : aAG-TCCC----CACTACTTGTTGGCTAGCTTATCCATGGCCATGTAC--TTT-TTA-TGATCAACTGTGT-TAAATACCTC-CACTTCACCTTT-CA-----CAGGAGCATC-GGCTGAGATATGAAC-ATAGACGATATCACCAAGAAGGCAAA-CGCCACTTTgataactcaaaaagctccaacagtgattaatggagaatcaagtgcacaaaagagtccccactacttgttggctagcttatccatggccatgtactttttatgatcaactgtgttaaatacctccacttcacctttcacaggagcatcggctgagatatgaacatagacgatatcaccaagaaggcaaacgccacttt
gi|12 : atttttgacttttcaaaggcctttaacaaggtcccacacattcgactgctgataaagctacatcattatgacatccgaggacgcatccatgacaagataacaagttacagggtgtacagaacgtgtttgtcctttgatagtcaatcattgcccgctaccatcatttcatccagagtcaggaaaacatttatcttcttgatgtacataaatgagaaattgtctcatcaaccactcgactatttgcaagacgactgtcttatgcacagaaggaccaggtcatcttatagggataactcaaaaagctccaacagtgattaatggagaatcaagtgcacaaaagAGGTCCTGACGAACTGCTCACCG-GCTTACTCTGAAAA---GAA--ATTAC--CAATGGTATCACAACCGCA-C---TT--ACACTTGTCTTCTAAGCTGCAATACAC----CAAGA-AAGAACCCCTAC-AAATTGGAATACAGCTACAATAACACCAATCTTCAAGAAGGGAGACAATAGCAAACCATTTA-ACTATCTTCCAGTGTTTTTAACTCCAGTATCTTTAACTTCAGTATGCTGCAAAGTACTGGAACATGTTATACACAGCTCCATCATGAGGTT-CTCTAACCAG-CACAATA----TTATATCTGACATG----CAGCATAGATTCTGCAA-ACAACGATC--CTGCAAATATCTCATCTTATCCTCACCATCCAATG-CCTGGCGAAAGGGATAGACA-ACAAAATCCAAATTGA-TGCTGTGCTCCTCGAATTTTCT--TAGGCGTTTGACAAAGTACCATACCCAG-------TGGCTAGCTAA-AAAAC-ACAACAC
gi|13 : ATGTGAACAACATCGATCAATGATGGAGACCGATGAACGAACAAAA-G-CTTTTAATACTCAGCTTT---AATAGCAGA-TGaatg
gi|13 : tttgaagaccaactccacaacgtgattaactcgtgttataaagacctaaaaatgctgttaacaaatgtgcagatactggtcagtagtGGGTACTGTCTACAGTTGACCAGCCAAGATGA-GGCCAAGATATTCTTAAGCCCA----GCAAAGTTTACATCGAAAGATATTACAACCTC-------ACT---GCGGTACCACTACCAGCTATAATGGAAATTAGCCCACACAGTCCAACCAGTCCCCATCAGCACAATCCATCAAAAATGGG-TAGAGAATCGTCCTACATACATCAGCTCAGCCCCCATAAAGCTACAGGCCCG---------------------------AAAG---AAAGCGTCACACCAG-------ATAGCTCCAGggtactgtctacagttgaccagccaagatgaggccaagatattcttaagcccagcaaagtttacatcgaaagatattacaacctcactgcggtaccactaccagctataatggaaattagcccacacagtccaaccagtccccatcagcacaatccatcaaaaatgggtagagaatcgtcctacatacatcagctcagcccccataaagctacaggcccgaaagaaagcgtcacaccagatagctccagnnnnnnnnnnnnnnnnnnnnnnnnnctactgtctacagcgacgccaagatgaa
gi|14 : tttgaagaccaactccacaacgtgattaactcgtgttataaagacctaaaaatgctgttaacaaatgtgcagatactggtcagtagtatgtgaacaacatcgatcaatgatggagaccgatgaacgaacaaaagcttttaatactcagctttaatagcagatAGATTAC-TAA-CGCAC---AAGTAGTGTA------ACATCT-AT--GCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-G-AGGATAGTTTAT-CA--GATAGTGGACAT-CCCGGTGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGGCCAGAGGC-CACTCCCTGCAATTT-CTTGTTCCACACACCAGGACGGAAGTG-TACA-AAATCT-CCTTCCT-CCCCAAAGCCAT-CCGGCCC-TGGAACAAATT-ACCAGGGGG-TGCAGTGGAGGGCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-GTACATAGACGACTCTGTGT----TAT--TT-T-----T------------------TTTTT-------ATCT-ATTTTA-ACTT-GCACTG------TA-CATAG-ATGTT-CA-C-TACCCT---CA-------CACAG-AG-TGTGA--T-AATAC----TTATT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGAnnnnnnnnnnnnnnnnnnnnnnnnnctactgtctacagcgacgccaagatgaa
gi|15 : AAGGACCCAAGGTC-ATGTAATGCATATAAC-AGGATAGTTTATGCA--GATAGTGAACAT-CC-GG-GGTGAGC----TACCTAACAA-CCAGCAATCACTGCGAACCAGAGGCACACTCCCTGCGTTTTTCTTGTTCCACACACCAGGACGACAGTG-TACATAGACCTGCCTTCTT--CCCCAAGCCATCCCGGCTC-TGGAACAAGTTGACCAGGGGGCCGCAGTGGAGGCCAAGACCTGCTTGGATCAGCTTTAAGAACC----AG--TGTTCC-GGTGCCTATGCCTCCAGTTGG----TAGAAAA--CTG---------------T-----TATTT---TT-AG----CTTTTTT-------ATCTAATTTTACACGT-GCAC-G------CA-CATAG-ATGTT-CACC-CAACCTCAACA-------CACAGAAA-TGCGA--TGAATACATTAT--TA-----AGT-GT-AA-TGGCACTAAA----A--ACCGGAAGAAGa
gi|16 : T---GAGG---GAAATATCTCACCAA-------ATAGCCTTAGC---TTTGACACTACTTTTCAAAGCTTCATTAGAC----CAATGCAAGGCCCCAGAT-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCCA-ACTATCGACCCGTGTC----ACT---G-ACCTCT-------GTTTGCAGCAAGGTCATGGAACATATTGTCCACAGCCATATCATTAGTCA-CT-TGGACAGCCATGGAC----TCCTCACTGATAGC----CAGCATGGATTCAGGAAGGCATTGCTCAACTG-AAA---CCCAACTCATCCTGTCATTTC-ATGACTTCACACTGAGCCTAGATATAGGGGA-GCAAGTGGACTG-
gi|17 : CTGAACTCACACAAAGTCAGCGGACCGGACCAGAT-ATCCACTATGTTTCT---GAAGTCCATATCATCTGTCC----------TAGCTCCAGCACCTCT--CATCATCTTTC-AAACATCACTCGAT----GAAGACCAAGTTCCTGAT-GACT-GGAAA---------------CCATTATTCAAGAAAGGCGACC--AGAGCACC---TA-ACTACAAACCAGTG--------------A------------GTTTAATGCAAGGTTGTCGAACATATCATCCACAGCCAAGTTATCAACCATCT-TG---AG--ACGAACAACATCCTCATCAATGAT----CAGGATGGTTTTCGAAA-ACGTCG
gi|18 : cTTAAGAACC----AG-CTG-TCC-GGTGCC---GT--CCGGCT-G----TA-ACGACT--ATGT---GTTA--TT-T-----TGCTT---TT-A----------------------T-ATTTTA-ACGTTGCACTG------TA-CATAGAATGTT-C--C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--TTTTAA-AGTGGT-AA-T-GCA----A----A--A---GAAGAAGA
gi|19 : TTG-CACTTCTCTTTCAAGCCTCAATACAC----CAAGACA-GGACCTAAACAGACT-GGAACACAACCACAATAACACCGATCCTCAAGAAGGAAGACaga
gi|2 : cccgcttactcaagggatgaccagtgaaattacacATGTGAAACACAT-A-TCATGGATGAGGACC-ATAACC---CAAAACG-CCTGTGG-----AGCTTTATGAAAACCAAA-CGCACGGACATCAGTT----TGTTTGCATCATTAAAGCGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTAAAGGC--AGATATCCTTAA--CCATGCAGCAA--TTTACATCAG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--A-A-TGGGAATTAGTCATTA---TCCAAC-AGTCCCCATCAGCACAATCCATAAAGATGAGG-TTGAGAAAT-TCCTACGT----CAGCTCAACACTCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAATACCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAGGCTTCATTAGAC----CAAGGCAAGGCCCCAGAT-GAAA-TGTAGTCGGCCAACATCACGCCACTATTCAAGAAGGGAGACCGAAGTGCACCAGCCA-ACTATCGACCCGTGTC----ACT---G-ACCTTT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACAGCTCTGTCATTAGCCA-CT-TGGACAGTCATGGAC----TCCTCACTGATAGC----CAACATGGATTCAGGAA-GCGTCGCCCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTTGTAAAGCGCCTAGACATGGGGGA-ACAAGTGGACTG-TGTACTTTTGGACTTCTCCTTGAGGCCTTCGATAAAGCCCTACA--CAA------CCGACTA-CTGATGAAACTACATCACTACGGCACCAGGGGCCGCACCCATG-C-ATGATTGGATCTCGAGTTTTCTTATTGGCCACACACAGCGTG-TTGTAC-TCGATGGTCAATCATCATCAGCTACTACCGTTTCATCAGAAGTCCCGCAGGGAACTATCCTAGGCCC-ACT-GTTCTTTCTAATTTTCATCAACA----ACCTGTCATCATCAGTGTC-TT--CTATCACCA----GAC--------------T---GTCTGGTGAACAGGAGGATCAAGACACC--ACA-GGACCAGGAGACTTTGCAGAG-CGACC-TC-AATAA-ACTACAGCAGTGGGAGGACCGATGGCTTATACAGTTCAACCCGGATAAGTGTGAAGTGCCAGGA--G-----T------CATCAACTGGAAA-TTCC----CAGTGCTCGCCGAATACAAAATCCACGATCAAGTCC--TAA-ATA-CATTTGACTCTGC-GAAGTACCTT-GG-TTGACTATT-CA-----TAAGAACCTT-AGCTGGGATAAGCAC-ATAGATAATATCACCAAGAAGGC-A----CCG---TGGCCTTCCTCGGCAGAAA--------------------CCAA---CCACAATC-AAGGCAAAGTGCT-TCTCTA----CCCTGGT-GCGACCTAACATCAATTGTGCTT-CCAGTG-TGT-GGAGCCCAGC----CAAGAGG-GAGAACATTAACAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TGTTCAAAGGTTAC-CAA-AGTAC---AAGCAGTGTA------ACATCTAATATACTAC-GGCAA--CTCCAGTGACAGTCAC-TCCAACACCGTCGGGAAAGGACCCGAG-TC-AT-GA-TGC-TATA-G-AGGATAGTTTAT-CA--GAAAGTGGA-----C-GGCGGTGAGCACTGTATCTA-C-A-CCTGCA-TCACTGCGGACCAGAGGC-CACGCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGACTT-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGTTCAAGAC---CCTGGA-CAGCTTTAAGAACC----AA-TTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGATTCTGTGTGG-GTTT--TT-T-----TTTTT---TTAAA----C-TTTTT-------ATCT-ATTCTA-ACGT-GCATTG------TA-CATAA-ATGTT-CA-CACCCCCT---CC-------CACAG-AG-TGCGA--T-AATAC----T--TC-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGAaaca
gi|20 : agtaaT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACT
gi|20 : CCAGCT-TTGACA-CTACT-AC----GCCTCACTGATAGC----CAGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCacgcctcactgatagccagcatggattcaggaagcgtcgctcaactgaaacccaactctaatagatctatcagcgagtgatttgtcaa
gi|21 : tgaaggaagcatcacaccaaatagctTGCC---GC--CCGGAT-G----TAGACGACTCTGTAG---GCTT--TT-T-----ATTT-------AC----C-TTTTT-------ATCT-GTTTTA-ACAT-GCACTG------TA-CATAG-CTGTT-CA-C-CAACCT---CA-------CAAAG-AG-TGT----T-AATA---------T-----AG-----AA-T-GCGCT--A----A--A-CGGAAGtaatagatctatcagcgagtgatttgtcaa
gi|24 : -T-----TATTT---TT-AG----C-TTTTT-------ATCT-ACTTTA-AAGT-GCACTG------TA-CATAG-ATGTT-CA-C-CA-CCT---CA-------AAAAG-AG-TGCGA--T-AATAC----T--TA-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAG
gi|25 : tataTGTAAAGTGCTACGG--GACAAGTACGGGATACCAATTGGAAA-TCTC----CAATGGTCGCCAAATACAAAATCCACAGCCAAGTCC--GAAGGCC-CAGTTGACTTTGC-AAA
gi|26 : t-TTTTT-------ATCT-ATTTTA-ACTT-ACACTG------TA-CATAG-ATGTT-AA-A-TACCCT---CA-------CACAG-AA-TGCGA--T-AATACT---T--TT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
gi|27 : gttaACTG------TA-C-TAG-ATGTTTCA-C-C-CCCA---CAAACACAACACAG-AGATGCGAACT-AGAAC----T--TC-----AGTGGT-AAATAGCACT--A----A--AGCGGAAGAAGA
gi|28 : GAGACCGAAGTTT-CTAGTTATCCTACTG-CCAGTGTC----AC------ACCCAT-------GT--GCAGTAAGGTCAAGGAAC--ATAGTCCCTGGTCTTTTCATTg
gi|29 : GAGACCGAAGTTT-CTAGTTA-TCTACCTGCCAGTGTC----AC------ACCCAT-------GT--GCAGTAAGGTCAAGGAAC--ATAGTCCCTGGTCTTTTCATT
gi|3 : ATGTGAACAACATCG-TCATGAATGAGGACC-ATGGAC---CAAAACGGTCTGTGG-----AGCTTTATTAAAAGCAAA-CAAACAGATGCCTGTG----GGGCTGCTCCGTTAAAGAGGGAGGGCATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCC----ACAA--TTTACATCCG----TATT-CA-CCTCGGAGAATACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTTCCCAACACCACAGTCGATCAAGATGGCG-TAGAGAAAC-CCCTACGT----CAGCTCAACCCCCATAAAGCTACAAGTCCGAACAAGGT-CTAATCAAGATTACT---GACG---GAAACATCACAACAA-------ATAGCACCAGC---TTTGACACTACTTTTTCAAGCTTCATTAGACTACTTAAGGCAAGACCCCAGAT-GAAC-GGAAGTCGGCCAACATCATGCCACTATGCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCCGTGTA----ACT---G-ACCTCT-------GTTTGCAACAAGGTCATGGAACTTATAGTCCACAGCCATACCATTAGCCA-CT-TGGACAGCCATGGAC----TCCTAACTGATAGT----CAGCATGGGTTCAAGAA-GGGTCTCTCAACTG-AAT---CCCAATTCATCCTGTCAGTTC-ATGATCTCGCAAGGGGCCTAGACATAAGGGA-GCAAGTGAACTG-TGT--------ACTTC--------------GGTAATGTCCCACA--CAA------CCGACTA-CTAATGA
gi|30 : cgaagatgacataatagcgttttaaccagctctagatcacaaagaccttcaaagattgtctaggagaaaggatcacgctttttaaaaaaatacccgaagaccaactccacacgttattaatcgtgctataaagaccttgaatactgtacatgtgcaatgcaaactcagatacgaggaat-GCAGTG------TAACATCT-ATGCT--A-C-CACCCT---CA-------CACAA-AG-TGCGA--T-AATAC----T--TTAAA--AGTGGT-AA-T-GCATT--A----A--ACCGGAAGA
gi|31 : TACAGC-GAC--GCCAAGATGAAGGC--AGATATCCTTAA--CCA----GGAA--TTTACATCAG----TATT-CA-CCT-------CACT---GCGGTACCtg
gi|33 : tgtcG-ATGTC-CA-C-CACCCT---CA-------CACAG-AG-TGTGA--T-AATAC----T--TA-----AATGAT-AA-T-GCACT--ACTGTAACACCGGAAGAAGA
gi|34 : ATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AA-TGCAA--T-AATAC----T--TT-----AAAAGTAAA-T-GCACT--A----A--ACCAGAAGAAGag
gi|35 : TCCGTCGAGGAAGGGCCCAAG-TT-AT-TA-TGC-TGTA-C-AGGATAGTTTAT-CA--GATAGTGGACAT-C
gi|36 : TGC-GAAGTACCTT-GGCTTGACTATT-CATAATTTAAGAACCTT-AGCGGGGATATGCAC-AT
gi|37 : ATCTTCAGTGTC-TT--CTACCACTA----GAC--------------TATTGTCTGATGTACAGGAGGATCAAGACAC
gi|38 : ----TAGACGACTCTGTGT------------T-----ATTTT---AT-AA----C-TTTTT-------ATCT-ATTTTA-ACAT-GCACTG------TA-CAT
gi|39 : -------CAAAG-AG-TGCAA--T-AATGC----T--TC-----AGTGGT-GA-T-GCA----A----A--A---GAAAAAGA
gi|4 : AAGAGCCTAGACATAGGGGA-GCAGGTAGACTA-TGTGCTTGTGGATTTCTCC--AAGGCCTTTGATAAAGTCCCACA--CAA------CCGACTA-CTTATGAAACTGCATCACTACGGCATCAGGGGCCGCACTCAT------GATTATATC-----------TATTGGGAGCACACAACGTG-TTGTAC-TCGATGGTCAGTAGTCATCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGACCC-GCT-GTTCTTCCTAATTTTCATCAATG----ACCTGTCATCATCAGTGTC-TT--CTACCACCA----GACTATTTGCTGATGATT---ATCTGATGTACAGGAGGATCAAGAAAAC--ACAGGGAACAGGAGGCTTTGCAGAGCCGACAATCAAATAAAACTACAGCA--GGGAGGACCGA-GGCTTATGCAGTTCAACCGCGATAAATGCGAAGTGCTACGG--G-----TA-----TACCAAGCGGAAATTCCC----CAATGCCCG-CGAATACAAAATCCAC-GCAAAGTCCATTAA-ACACCAGTTGACTCTGCAAAAGTACCTTGGGCTTGACTATTCCA-----TAAGAACCTTCAGCTGGGATACGCACAATAGATACGATCACCAGCAAGGC-AATCTCCACTCTCGGCTTCCTCGGCAGAAACATCAGCA--AGAT----GCCCAAAACCCACCATCAAAGGCACAGTGCTTACTTCATTTGCTTTGGTGGCGACCCACC-TCGAATATGCTTGCCAGCGTTGT-TGAGCCCAGCCACACAAAAAG-GAGAATATTAAGAAACTC-GAGCGCAGTTGCAGCGTAGGGCAGCCAGCATGTTTGCACTTGTG----AAAATTACTCAAGCGCACATAAGGCAGTGTA------ACATC---TATGCTAC-tgacgaag
gi|5 : CCTCGACAGAAACATCAGC---CAAT----GCCCAA---CCACCATC-GAGGCACTGTGCTA-TTCCA----CGCTAGT-GCGACCCACCATTGAATATGCCT-CCAGCG-TGT-GGAGCCC-GA----CAAGAAA-GAGAACATCAACAAACTC-GAG-GCCA-TACAGCGTAGGGCAGTTAG---ATTCGC-CAT-CG----AAGATTAT-CAA-AGTAC---AAGCAGTGTACTGTAAACATCT-AT---CTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACAT-CCCGGCGGTGAGC----TAC-TA-CAG-CAAGCA-TCACTGCGGATCAGAGGC-CACTCCCTGCGATTT-CTTAACCCACACACCAGGACGACGGTG-TACA-AGGACC-CCTTC----CCCCAAG--GT-C--------AGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACCAGCTAG-CTG-TCC-GGTGCC---GC--CCAGC
gi|5 : TTT---TA-AA----C-TT----------ATCT-ACTTTA-ACGT-GCACCG------TA-CATAG-ATGTT-TA-C-Ccttttggttttaagaaaaaaaaaaaaaaaccggaccttccctgtaaaatgttttaaacttatctactttaacgtgcaccgtacatagatgtttacc
gi|6 : cctcgacagaaacatcagccaatgcccaaccaccatcgaggcactgtgctattccacgctagtgcgacccaccattgaatatgcctccagcgtgtggagcccgacaagaaagagaacatcaacaaactcgaggccatacagcgtagggcagttagattcgccatcgaagattatcaaagtacaagcagtgtactgtaaacatctatctacagcaactccagtggcagtcactccagctccgtcgggaaagggcccaagtcattatgctatacaggatagtttatcagatagtggacatcccggcggtgagctactacagcaagcatcactgcggatcagaggccactccctgcgatttcttaacccacacaccaggacgacggtgtacaaggaccccttcccccaaggtcagaacaagttaccagggggcgcagtggaggccaagaccctggacagctttaagaaccagctagctgtccggtgccgcccagccttttggttttaagaaaaaaaaaaaaaaaccggaccttccctgtaaaatgATGTGAACAACATTA-TCATGGATGAGGATC-ATAAGC---CAAAACG-CTTGTGG-----AGCTTTATCAAAAGCAAG-CGCACGGATGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTACGTACATT-GAC--GCCAGGGTGAAGGC--AGATAGCCGTAA--TCG----GCAA--TTTACATCTG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTTCCCAACATCACAGTCCATAAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAATCTACAGGCCCGGACGAGGT-CTCGTCAAAACT-CT-------------------CATGAA-------ATAGCTCCAGC---TTTGACAATACTTTTTCAAGCTTCATTAGAC----CAAGACAAGGCCCCAG
gi|7 : gaaaatgacatcacagcgctttaaccagccctggatcacaagagacctgaaacagttgtctaggagaaaggatcgtgcttttaaacgatactccaagaccaactccacacgtgattactcgtgctataaagaccttaaaaatgctgtacatgtgcaatgcaaactcagatatgaggagtGGCAGAAACATCAGC---CGATCGATGCCCAA---CCACCATC-AAGGCACAGTGCTA-CTCCA----CCCTGAT-GCGACCTACCATT------------CAGCA-TGT-AGAGCCCAGC----CAAGAAT--AGAACATCAATAAACTC-GAG-GCCG-TATTGTGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAA-CAA-CGCAC---------------------------TATGCTAC-AGCAA--CTCCAATGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGACCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTAAT-CA--GATAGTGGACAT-CCAGGCGGTGAGC----TACCTT-CAA-CCAGCT-TCACTGTGGACCAGAGAC-CAC-----------------------ACACCAGGACGACAGCG-AACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGAA----GTAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCA-GGTGCC---AC--CCAACT-A---------------GTGT---GTTTGGTTGT-----TTTTTAAATT-AA----T-TTTTTTTTTTA-ATCT-ATTTTA-ACGT-GCACTGTACATATA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAA-AG-TGCGA--T-
gi|8 : tgAGCATC-GCGATCGAT----GCCCAAA--CCACCA-C-AAGGCACAGTGCTTACTCCA----CCCTGAT-GCGACCTACCA------AT-----TCAGCA-TGTTAGAGCC--AT----CAAGAAT-ATGAACATCAATAAACTCCGAG-GCCG-TACTGTGTAGGGCAGCCA----ATTCCC-CAT-TG----GAGATTAC--AA-CGCAC---------------------------TATGCTACCAGCAAACTTCCAAGGGCAGTCACGTCCAGCTCCGTCGG-AAAGGGACCAA--TCGAT-TA-TGC-TATA-CCAGAATAATTAAT-CAAAGATAGTGGACAT-CCAGGCGGTGAG-----TACCTG-CAAACCAGCT-TCACT-TGGACCA-AGAC-C----------------------CACACACCAGGACGACAGCGACACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTCATGGAACAAGTT-ACCAGAAG----TAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AGTCTG-TTCAGGTGCC---AC--CCAAC-------TAG-------TGTGTTTGGTTG--TT-T-----TTTTTAAATT-AA----T-TTTTTTTTATTAATCT-ATTTTA-ACGT-GCACTGT-----TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAA-AG-TGCGAT-T-AATtaa
gi|9 : ATGTGAACAACATTG-TCACGAATGAGGACC-ATAAAC---CAAAACG-CCCGTGG-----AGCTTTATTAAAAGCAAA-TGCACGGACGCCTGTG----GGGTTGCACCATTAAAGCGGGAAGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCTG----TATT-CA-CCTCGGAGATCACA---GCGGAGCCACTACCAG--ATA-TAGTGATTAGCTCACA---TCCAAC-AGTCTCCAACATCACAGTCCATCAAGATGGGGATAGAGAAAC-TATTACGT----CAGCTCAATCCCCATAAAATTACAGACCCGGACGAGGT-CTCATCAAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTAC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|22 ): ATGGCTTTTACAAAAACAATCCTGTGATTTCCAACTTATTCACACCATTCAAACCTGGACTGGTACTGACAACTCTTCAAAGATGGATGCCATCTTACTCGATATCTCCAAGGCGTTCGACGAG
Unaligned ( gi|23 ): CACAGCTCCATCATTCGATCACAATGATCTATCTGACATGCAGCATGGTTTCCGCAAACAACGATCCTGCGAATCTCAACTCAGTTATCCTCACCATCCACGGCCTGGCGAAAG
Unaligned ( gi|32 ): CAGCGCTTTAACCAGCCCTGGATCACAAGATACCTGAAACGGTTGTATAGGAGAAAGGATCGTGCTTTTAAACGAT
Unaligned ( gi|40 ): CCAGTATAATTAACTTCTGTACATGCAAATTACTGGAACATGTCATATGCA
Alignments
lowQualScore : 111 111 11111 1111 1111 1111 111 111 1111 1111111 1111 1111 111111 222222222 1 1111 1111 111 1111 2222222222 55555 222222222 1 1 1111 5555555555555555555555555555555555555 11 1 1 1 1 1 666666666666666 1111 11 22222 111 1111 111 1111 444444444444 1111 111 11111 11111 2222222222222222 1111 111111 3333333333333333333333333333333333333 1111111 111111 222222
lowQualScore : 111 6 1 111 2 6 66666 3 6 7777 0 5 77 77 77 2222 77 1 2222 5 5 0 3 000 99 6 1 111 6 1 6 6 4444 1 5 1 44 3 777 777 9 1 3333333 777 0 1 0000 77 5 5 22 0 11 444 44 5 2 1 0000 999999 000000000 6 6 0 2 1 1 1 5 6 1 2222 1 2222 5 6 111 8 0 6 6 6 1 2 6666 1 0000000000 6 0 0 33333 888888888 1 55 0 0 0 2 3 2 22 22 3 66 7777 3 5 2222222222222222222222222222222222222 33 0 3 3 3 3 6 7 000000000000000 0 8 7777 3 3 11 8 8 88 8 3 8 00000 8 1 1 8 1 66 3 2 0 3 888 4444 888 6 6 6 4444 6 0 111111111111 6 6 44 2222 88 1 5 5 5 000 5 5 22222 5 5 22222 0000000000000000 5 77 5 4 4 4 4 4 666 4 66 2 0000 5 5 5 5 3 0 5 0 5 5 5 77 5 5 5 777 888 5 9999 4 4 4 777 55 000000 1 0 0000000000000000000000000000000000000 8888888 3 3 2 000000 2 2 2 2 2 444 8888888 2 2 55 2 9999 44 000000 3 3 6 44 6666 44 3
lowQualScore : ... . . ... . . ..... . . .... . . .. .. .. .... .. . .... . . . . ... .. . . ... . . . . .... . . . .. . ... ... . . ....... ... . . .... .. . . .. . .. ... .. . . . .... ...... ......... . . . . . . . . . . .... . .... . . ... . . . . . . . .... . .......... . . . ..... ......... . .. . . . . . . .. .. . .. .... . . ..................................... .. . . . . . . . ............... . . .... . . .. . . .. . . . ..... . . . . . .. . . . . ... .... ... . . . .... . . ............ . . .. .... .. . . . . ... . . ..... . . ..... ................ . .. . . . . . . ... . .. . .... . . . . . . . . . . . .. . . . ... ... . .... . . . ... .. ...... . . ..................................... ....... . . . ...... . . . . . ... ....... . . .. . .... .. ...... . . . .. .... .. .
lowQualScore : 000 7 5 777 5 7 77777 7 7 0000 6 7 99 99 99 1111 99 0 1111 7 7 7 0 000 22 7 0 777 7 5 7 7 2222 4 0 0 44 4 000 000 8 2 0000000 888 8 4 6666 11 7 4 00 7 66 999 88 0 2 0 6666 444444 999999999 5 5 5 0 0 2 4 7 6 7 1111 4 1111 7 7 777 0 8 7 7 4 5 5 5555 8 8888888888 7 8 2 00000 222222222 2 22 0 8 0 0 2 5 88 88 0 88 8888 2 6 2222222222222222222222222222222222222 88 0 3 3 3 3 7 3 222222222222222 2 0 0000 2 2 00 0 0 88 0 2 0 00000 0 0 4 0 0 88 0 5 2 2 333 2222 333 7 7 7 2222 7 3 000000000000 7 7 22 1111 77 0 7 7 7 000 7 7 66666 0 0 88888 6666666666666666 0 99 7 4 4 4 4 4 222 4 11 5 6666 0 0 0 0 1 2 0 2 0 0 0 55 0 0 0 888 888 0 4444 4 4 4 000 55 333333 6 5 2222222222222222222222222222222222222 8888888 1 1 9 333333 7 5 5 5 5 777 1111111 5 5 99 5 6666 22 111111 1 1 2 22 5555 22 5
consensus : NNNNNATGTGAACAACATCG-TCATGGATGAGGACC-ATAAAC---CAAAACG-CCTGTGG-----AGCTTTATCAAAAGCAAA-CGCACGGACGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCNG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTCCCCAACATCACAGTCCATCAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAAGCTTCATTAGAC----CAAGGCAAGGCCCCAGAC-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCNGTGTC----ACT---G-ACCTNT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACGGCCNTATCATTAGCCA-CT-TGGACAGCCACGGAC----TCCTCACCGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTCGCAAAGAGCCTAGACATAGGGGA-GCAAGTGGACTG-TGTGCTTTTGGACTTCTCC--GAGGCCTTTGATAAAGTCCCACACAACC---G------ACTA-CTGATGAAACTACATCACTACGGCATCAGGGGCCGCACCCATG-CA--ATTGGATCTCGAGTTTCCTTATTGGNCGCACACAGCGTG-TTGTAC-TCGATGGTCAATCGTCGTCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCCGCTGTTCTTCCTGATTTTCATCAACG---ACCTGTCATCATCAGTGTCTT-G-CTACCACCA----GAC--------------T---GTCTGATGTACAGGAGGATCAAGACACC--ACA-GGACCAGGAGGCTTTGCAGAG-CGAC-CTC-AAT-AAACTACAGCAGTGGGAGGACCGATGGCTTATGCAGTTCAACCCGGATAAGTGCGAAGTGCTACGG--G-----TA-----TACCAACCGGAAA-TCCCCA----ATGCTCGCCGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-GAAGTACCTT-GGCTTGACTATT-CA-----TAAGAACCTT-AGCTGGGATACGCAC-ATAGATAANATCACCAAGAAGGCAAACTCCACTCTGGCCTTCCTCGGCAGAAACATCAGC---CGAT----GCCCAA---CCACCATC-AAGGCACAGTGC-T-ACTCCA----CCCTGGT-GCGACCTACCATCG-A-TATGCCT-CCAGCG-TGT-GGAGCCCAGC----CAAGAAN-GAGAACATCAANAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-ATATGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTGT---GTTT--TT-T-----TTTTT---TT-AA----C-TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--TT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
Reference ( family-301 ) : NNNNNATGTGAACAACATCG-TCATGGATGAGGACC-ATAAAC---CAAAACG-CCTGTGG-----AGCTTTATCAAAAGCAAA-CGCACGGACGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCNG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTCCCCAACATCACAGTCCATCAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAAGCTTCATTAGAC----CAAGGCAAGGCCCCAGAC-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCNGTGTC----ACT---G-ACCTNT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACGGCCNTATCATTAGCCA-CT-TGGACAGCCACGGAC----TCCTCACCGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTCGCAAAGAGCCTAGACATAGGGGA-GCAAGTGGACTG-TGTGCTTTTGGACTTCTCC--GAGGCCTTTGATAAAGTCCCACACAACC---G------ACTA-CTGATGAAACTACATCACTACGGCATCAGGGGCCGCACCCATG-CA-GATTGGATCTCGAGTTTCCTTATTGGNCGCACACAGCGTG-TTGTAC-TCGATGGTCAATCGTCGTCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCCGCTGTTCTTCCTGATTTTCATCAACG---ACCTGTCATCATCAGTGTCTT-G-CTACCACCA----GAC--------------T---GTCTGATGTACAGGAGGATCAAGACACC--ACA-GGACCAGGAGGCTTTGCAGAG-CGAC-CTC-AAT-AAACTACAGCAGTGGGAGGACCGATGGCTTATGCAGTTCAACCCGGATAAGTGCGAAGTGCTACGG--G-----TA-----TACCAACCGGAAA-TCCCCA----ATGCTCGCCGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-GAAGTACCTT-GGCTTGACTATT-CA-----TAAGAACCTT-AGCTGGGATACGCAC-ATAGATAANATCACCAAGAAGGCAAACTCCACTCTGGCCTTCCTCGGCAGAAACATCAGC---CGAT----GCCCAA---CCACCATC-AAGGCACAGTGC-T-ACTCCA----CCCTGGT-GCGACCTACCATCG-A-TATGCCT-CCAGCG-TGT-GGAGCCCAGC----CAAGAAN-GAGAACATCAANAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-ATATGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTGT---GTTT--TT-T-----TTTTT---TT-AA----C-TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--TT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
gi|1 : ATGTGAACAACATTA-TCATGGATGAGGACC-A----C---CTAA----CCTGTGG-----AGCTTTATCAAAAGCAAATCGCACGGATGTCTGTGCATGGGACTGCACCATTAAAGAGGGGGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGGTATCCTTAT--TCA----GCAA--TTTACATCTG----TATT-CA-CCTTGGAGAGCACTACTGCGGAACCACTACCAG--ATA-TGTGAATTAG------------------TTCCCAACATCACAGTTCTTCAAGATGGGG-TAGAGAAAT-CCCCACGT----CAGCTCAAACCCCATAAAGCTACAGGCCCGGACTGGGT-CTCACCAAGATTACT---GAAG---GAA-CATCTCACCCA-------ATAGCTCCAGC---TT-GACACTACTTTTCCAAACTTCATTAGAC----CAAGGCAAGACCCCAGAT-GAAT-GGAAGTTGGCCAACATCACGCCGCTATTCAGGAAGTGAGA---------ACCA-----ACTATCGACCCGTGTC----ACT---G-ACCT---------GTTTACATCAAGGTCATGGAACATATAGTCCACAGCCATATTATTAGTCA-CT-TGGACAGCCATGGAC----CCCTCACCGATAGCCTGTCAGCATGGATTCAGGAA-GCGTCGTACAACTG-AAA---CCCAATTCATCCTGTCAGTTC-ATGACCTCGCAAAGACCCTAGACATAGGGGA-GCGAGTGGACTG-TGTACTTTTGGACTTCTCC--AAGATCTTTGATAAAGTCCCACACAGCC---GGCCCCGACTA-CTGATGAAACTACATCACTACGGCATTAGGAGCCGCACAAATG-----ATTGGATCTCAAATTTCCTTAATGGCTGCACACAGCGTG-TTATGC-TCGATGGTCAATCGTCATCAGCCGCTGCCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCGGCTGGTCTTCCTGATT---GTCTACT---ACC-------ACCAGACTCTTTG-CTG--AT------GAT--------------T---GTCTGATGTATAGGAGGATCAAGACGCT--ACA-GGACCAAGAGGCTTTGCAGAG-CGAC-CTC-AAT-AATTTACAGCAGTGGAAGGAGCGATGGCTTATGCAGTTCAACCCGGACAAGTGCGAAGAGCTACGGCCG------A-----TACCAACCGGAAA-TCCCCATGCAATGCTCGCAGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-AGAGTACCTT-GGTTTGACTATT-CA-----TAAGAACCTT-CGCAGGGATACGCAC-ATAGATAAGATCCCCAAGAAGGCAAACTCCACTCTGGCCTACCTTGGCAGAAACATCAGC---CGAT----GCCCAA---CAACCATC-AAGGCACAGTGC-T-ACGCCA----CCCTGGT-GCGACTAACCATCG-A--ATGTCA-CCAGCG-TGT-GGAGTCTAGC----CAAG----GAGAACATCAATAAACTC-AAG-GCCG-CACAGCGTAGGGCAGCCAG---ATTTGC-CAT-TG----GAGATTAC-CAA-CGCAC---AGGCAGTGTA------AAA--T-GTATGCTAC-AACAA--CTCCAGTGGCAGTCAC-TCCAGCTCTGTCGGGGAAGGGCCCAAG-TC-AT-TA-TGT-TATA-T-AGGATAGTTCAT-CA--GATAGTGGATATCCCAGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGAGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGGAAGTG-TATA-AGACCT-CCTTCTTCCCCCCAAGCCAT-CCGGCTC-AGGAACAAGTT-ACCAGGAGA-AGCAGT--------AGAC---CCTGG----------AAAACC----TG-CTG-TCC-GGTGCC---GC--CCAGCT-C----TAGACGACTCGATCT---GTTT--TT-TGGTGGTTTTT---TT-
gi|1 : tcaaggagaaaacatcgtgcttttaaacgatactcaaagaccaactccacacgtgattactcgtgctatagagaccttaaaaatgctgtacatgtgcaatgcaagctcagatatgaggagtTTTGTGT---TTTT--TT-TTTGG-TTTTT---TT-AAAATGC-TTTTT-------ATCT-AATTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-GG-TGCGA--T-AATttggggggggggtgtgtgttttttttttgtgttttttttttggtttttttaaaatgctttttatctaatttaacgtgcactgtacatagatgttcaccaccctcacacagggtgcgataat
gi|10 : tcaaggagaaaacatcgtgcttttaaacgatactcaaagaccaactccacacgtgattactcgtgctatagagaccttaaaaatgctgtacatgtgcaatgcaagctcagatatgaggagtatgtgaacaacattatcatggatgaggaccacctaacctgtggagctttatcaaaagcaaatcgcacggatgtctgtgcatgggactgcaccattaaagagggggggtattgcgtacagtgacgccagggtgaaggcaggtatccttattcagcaatttacatctgtattcaccttggagagcactactgcggaaccactaccagatatgtgaattagttcccaacatcacagttcttcaagatggggtagagaaatccccacgtcagctcaaaccccataaagctacaggcccggactgggtctcaccaagattactgaaggaacatctcacccaatagctccagcttgacactacttttccaaacttcattagaccaaggcaagaccccagatgaatggaagttggccaacatcacgccgctattcaggaagtgagaaccaactatcgacccgtgtcactgacctgtttacatcaaggtcatggaacatatagtccacagccatattattagtcacttggacagccatggacccctcaccgatagcctgtcagcatggattcaggaagcgtcgtacaactgaaacccaattcatcctgtcagttcatgacctcgcaaagaccctagacataggggagcgagtggactgtgtacttttggacttctccaagatctttgataaagtcccacacagccggccccgactactgatgaaactacatcactacggcattaggagccgcacaaatgattggatctcaaatttccttaatggctgcacacagcgtgttatgctcgatggtcaatcgtcatcagccgctgccgtttcatcaggagtccctcagggaactgtcctaggccggctggtcttcctgattgtctactaccaccagactctttgctgatgattgtctgatgtataggaggatcaagacgctacaggaccaagaggctttgcagagcgacctcaataatttacagcagtggaaggagcgatggcttatgcagttcaacccggacaagtgcgaagagctacggccgataccaaccggaaatccccatgcaatgctcgcagaatacaaaatccacggccaagtcctaaatacagttgactctgcagagtaccttggtttgactattcataagaaccttcgcagggatacgcacatagataagatccccaagaaggcaaactccactctggcctaccttggcagaaacatcagccgatgcccaacaaccatcaaggcacagtgctacgccaccctggtgcgactaaccatcgaatgtcaccagcgtgtggagtctagccaaggagaacatcaataaactcaaggccgcacagcgtagggcagccagatttgccattggagattaccaacgcacaggcagtgtaaaatgtatgctacaacaactccagtggcagtcactccagctctgtcggggaagggcccaagtcattatgttatataggatagttcatcagatagtggatatcccagcggtgagctacctacaaccagcatcactgaggaccagaggccactccctgcgatttcttgttccacacaccaggacggaagtgtataagacctccttcttccccccaagccatccggctcaggaacaagttaccaggagaagcagtagaccctggaaaacctgctgtccggtgccgcccagctctagacgactcgatctgttttttggtggtttttttttggggggggggtgtgtgtttttttGC----CAAAAAATGAGAATATCAAGAAACTC-GAG-GCCG-TGCAGCGTAGGGCAGCCAG---A-------------------ATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-AT--GCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TACCTA-CAA-CAAGCA-TCACTGCGGAACAGTAGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGGAAGTG-TACA-AGACCT-CCTTCTT-ACCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTGT----TAT--TT-T-----T------------------TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-GATAG-ATGTT-CA-C-TACCCT---CA-------CACAG-AG-TGTGA--T-AATAC----T--TTTTAAAAGTGGT-AA-T-GCACT--A----A--ACCGGGAGAAGA
gi|11 : TTTTTGACTTTTCA--AAGGCCTTTAACAAGGTCCCACACATTC---G------ACTG-CTGATAAAGCTACATCATTATGACATCCGAGGACGCATCCATGACA-----AGATAACAAG-----TTACAGGGTGTACAGAACGTGTTTGTCCTTTGATAGTCAATCATTGCCCGCTACCATCATTTCATCCAGAG----TCAGGAAAACAT-TTA----------TCTTCTTGATGTACATAAATGAGAAATTGTC-TCATCAACCACTC-GACTATTTGCAAGACGAC--------------T---GTCTTATGCACAGAAGGACCAGGTCATCTTATA-GG
gi|11 : aAG-TCCCCA----CTACTTGTTGGCTAGCTTATCCATGGCCATGTAC--TTT-TTA-TGATCAACTGTGT-TAAATACCTC-CACTTCACCTTT-CA-----CAGGAGCATC-GGCTGAGATATGAAC-ATAGACGATATCACCAAGAAGGCAAACGCCACTTTgataactcaaaaagctccaacagtgattaatggagaatcaagtgcacaaaagagtccccactacttgttggctagcttatccatggccatgtactttttatgatcaactgtgttaaatacctccacttcacctttcacaggagcatcggctgagatatgaacatagacgatatcaccaagaaggcaaacgccacttt
gi|12 : atttttgacttttcaaaggcctttaacaaggtcccacacattcgactgctgataaagctacatcattatgacatccgaggacgcatccatgacaagataacaagttacagggtgtacagaacgtgtttgtcctttgatagtcaatcattgcccgctaccatcatttcatccagagtcaggaaaacatttatcttcttgatgtacataaatgagaaattgtctcatcaaccactcgactatttgcaagacgactgtcttatgcacagaaggaccaggtcatcttatagggataactcaaaaagctccaacagtgattaatggagaatcaagtgcacaaaagAGGTCCTGACGAACTGCTCACCG-GCTTACTCTGAAAA---GAA--ATTAC--CAATGGTATCACAACCGCA-C---TT--ACACTTGTCTTCTAAGCTGCAATACAC----CAAGA-AAGAACCCCTAC-AAATTGGAATACAGCTACAATAACACCAATCTTCAAGAAGGGAGACAATAGCAAACCATTTA-ACTATCTTCCAGTGTTTTTAACTCCAGTATCTTTAACTTCAGTATGCTGCAAAGTACTGGAACATGTTATACACAGCTCCATCATGAGGTT-CTCTAACCAG-CACAATA----TTATATCTGACATGC----AGCATAGATTCTGCAA-ACAACGATC--CTGCAAATATCTCATCTTATCCTCACCATCCAATG-CCTGGCGAAAGGGATAGACA-ACAAAATCCAAATTGA-TGCTGTGCTCCTCGAATTTTCT--TAGGCGTTTGACAAAGTACCATAC--CCAGTG------GCTAGCTAA-AAAAC-ACAACAC
gi|13 : ATGTGAACAACATCGATCAATGATGGAGACCGATGAACGAACAAAA-G-CTTTTAATACTCAGCTTT---AATAGCAGA-TGaatg
gi|13 : tttgaagaccaactccacaacgtgattaactcgtgttataaagacctaaaaatgctgttaacaaatgtgcagatactggtcagtagtGGGTACTGTCTACAGTTGACCAGCCAAGATGA-GGCCAAGATATTCTTAAGCCCA----GCAAAGTTTACATCGAAAGATATTACAACCTC-------ACT---GCGGTACCACTACCAGCTATAATGGAAATTAGCCCACACAGTCCAACCAGTCCCCATCAGCACAATCCATCAAAAATGGG-TAGAGAATCGTCCTACATACATCAGCTCAGCCCCCATAAAGCTACAGGCCCG---------------------------AAAG---AAAGCGTCACACCAG-------ATAGCTCCAGggtactgtctacagttgaccagccaagatgaggccaagatattcttaagcccagcaaagtttacatcgaaagatattacaacctcactgcggtaccactaccagctataatggaaattagcccacacagtccaaccagtccccatcagcacaatccatcaaaaatgggtagagaatcgtcctacatacatcagctcagcccccataaagctacaggcccgaaagaaagcgtcacaccagatagctccagnnnnnnnnnnnnnnnnnnnnnnnnnctactgtctacagcgacgccaagatgaa
gi|14 : tttgaagaccaactccacaacgtgattaactcgtgttataaagacctaaaaatgctgttaacaaatgtgcagatactggtcagtagtatgtgaacaacatcgatcaatgatggagaccgatgaacgaacaaaagcttttaatactcagctttaatagcagatAGATTAC-TAA-CGCAC---AAGTAGTGTA------ACATCT-AT--GCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-G-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGTGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGGCCAGAGGC-CACTCCCTGCAATTT-CTTGTTCCACACACCAGGACGGAAGTG-TACA-AAATCT-CCTTCCT-CCCCAAAGCCAT-CCGGCCC-TGGAACAAATT-ACCAGGGGG-TGCAGTGGAGGGCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-GTACATAGACGACTCTGTGT----TAT--TT-T-----T------------------TTTTT-------ATCT-ATTTTA-ACTT-GCACTG------TA-CATAG-ATGTT-CA-C-TACCCT---CA-------CACAG-AG-TGTGA--T-AATAC----TTATT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGAnnnnnnnnnnnnnnnnnnnnnnnnnctactgtctacagcgacgccaagatgaa
gi|15 : AAGGACCCAAGGTC-ATGTAATGCATATAAC-AGGATAGTTTATGCA--GATAGTGAACATCC-GG-GGTGAGC----TACCTAACAA-CCAGCAATCACTGCGAACCAGAGGCACACTCCCTGCGTTTTTCTTGTTCCACACACCAGGACGACAGTG-TACATAGACCTGCCTTCTT--CCCCAAGCCATCCCGGCTC-TGGAACAAGTTGACCAGGGGGCCGCAGTGGAGGCCAAGACCTGCTTGGATCAGCTTTAAGAACC----AG--TGTTCC-GGTGCCTATGCCTCCAGTTGG----TAGAAAA--CTG---------------T-----TATTT---TT-AG----CTTTTTT-------ATCTAATTTTACACGT-GCAC-G------CA-CATAG-ATGTT-CACC-CAACCTCAACA-------CACAGAAA-TGCGA--TGAATACATTAT--TA-----AGT-GT-AA-TGGCACTAAA----A--ACCGGAAGAAGa
gi|16 : T---GAGG---GAAATATCTCACCAA-------ATAGCCTTAGC---TTTGACACTACTTTTCAAAGCTTCATTAGAC----CAATGCAAGGCCCCAGAT-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCCA-ACTATCGACCCGTGTC----ACT---G-ACCTCT-------GTTTGCAGCAAGGTCATGGAACATATTGTCCACAGCCATATCATTAGTCA-CT-TGGACAGCCATGGAC----TCCTCACTGATAGCC----AGCATGGATTCAGGAAGGCATTGCTCAACTG-AAA---CCCAACTCATCCTGTCATTTC-ATGACTTCACACTGAGCCTAGATATAGGGGA-GCAAGTGGACTG-
gi|17 : CTGAACTCACACAAAGTCAGCGGACCGGACCAGAT-ATCCACTATGTTTCT---GAAGTCCATATCATCTGTCC----------TAGCTCCAGCACCTCT--CATCATCTTTC-AAACATCACTCGAT----GAAGACCAAGTTCCTGAT-GACT-GGAAA---------------CCATTATTCAAGAAAGGCGACC--AGAGCACC---TA-ACTACAAACCAGTG--------------A------------GTTTAATGCAAGGTTGTCGAACATATCATCCACAGCCAAGTTATCAACCATCT-TG---AG--ACGAACAACATCCTCATCAATGATC----AGGATGGTTTTCGAAA-ACGTCG
gi|18 : cTTAAGAACC----AG-CTG-TCC-GGTGCC---GT--CCGGCT-G----TA-ACGACT--ATGT---GTTA--TT-T-----TGCTT---TT-A----------------------T-ATTTTA-ACGTTGCACTG------TA-CATAGAATGTT-C--C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--TTTTAA-AGTGGT-AA-T-GCA----A----A--A---GAAGAAGA
gi|19 : TTG-CACTTCTCTTTCAAGCCTCAATACAC----CAAGACA-GGACCTAAACAGACT-GGAACACAACCACAATAACACCGATCCTCAAGAAGGAAGACaga
gi|2 : cccgcttactcaagggatgaccagtgaaattacacATGTGAAACACAT-A-TCATGGATGAGGACC-ATAACC---CAAAACG-CCTGTGG-----AGCTTTATGAAAACCAAA-CGCACGGACATCAGTT----TGTTTGCATCATTAAAGCGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTAAAGGC--AGATATCCTTAA--CCATGCAGCAA--TTTACATCAG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--A-A-TGGGAATTAGTCATTA---TCCAAC-AGTCCCCATCAGCACAATCCATAAAGATGAGG-TTGAGAAAT-TCCTACGT----CAGCTCAACACTCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAATACCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAGGCTTCATTAGAC----CAAGGCAAGGCCCCAGAT-GAAA-TGTAGTCGGCCAACATCACGCCACTATTCAAGAAGGGAGACCGAAGTGCACCAGCCA-ACTATCGACCCGTGTC----ACT---G-ACCTTT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACAGCTCTGTCATTAGCCA-CT-TGGACAGTCATGGAC----TCCTCACTGATAGCC----AACATGGATTCAGGAA-GCGTCGCCCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTTGTAAAGCGCCTAGACATGGGGGA-ACAAGTGGACTG-TGTACTTTTGGACTTCTCCTTGAGGCCTTCGATAAAGCCCTACACAACC---G------ACTA-CTGATGAAACTACATCACTACGGCACCAGGGGCCGCACCCATG-CATGATTGGATCTCGAGTTTTCTTATTGGCCACACACAGCGTG-TTGTAC-TCGATGGTCAATCATCATCAGCTACTACCGTTTCATCAGAAGTCCCGCAGGGAACTATCCTAGGCCCACTGTTCTTTCTAATTTTCATCAACA---ACCTGTCATCATCAGTGTCTT---CTATCACCA----GAC--------------T---GTCTGGTGAACAGGAGGATCAAGACACC--ACA-GGACCAGGAGACTTTGCAGAG-CGAC-CTC-AAT-AAACTACAGCAGTGGGAGGACCGATGGCTTATACAGTTCAACCCGGATAAGTGTGAAGTGCCAGGA--G-----T------CATCAACTGGAAA-TTCCCA----GTGCTCGCCGAATACAAAATCCACGATCAAGTCC--TAA-ATA-CATTTGACTCTGC-GAAGTACCTT-GG-TTGACTATT-CA-----TAAGAACCTT-AGCTGGGATAAGCAC-ATAGATAATATCACCAAGAAGGCA----CCG---TGGCCTTCCTCGGCAGAAA--------------------CCAA---CCACAATC-AAGGCAAAGTGC-T-TCTCTA----CCCTGGT-GCGACCTAACATCA-ATTGTGCTT-CCAGTG-TGT-GGAGCCCAGC----CAAGAGG-GAGAACATTAACAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TGTTCAAAGGTTAC-CAA-AGTAC---AAGCAGTGTA------ACATCTAATATACTAC-GGCAA--CTCCAGTGACAGTCAC-TCCAACACCGTCGGGAAAGGACCCGAG-TC-AT-GA-TGC-TATA-G-AGGATAGTTTAT-CA--GAAAGTGGA-----CGGCGGTGAGCACTGTATCTA-C-A-CCTGCA-TCACTGCGGACCAGAGGC-CACGCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGACTT-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGTTCAAGAC---CCTGGA-CAGCTTTAAGAACC----AA-TTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGATTCTGTGTGG-GTTT--TT-T-----TTTTT---TTAAA----C-TTTTT-------ATCT-ATTCTA-ACGT-GCATTG------TA-CATAA-ATGTT-CA-CACCCCCT---CC-------CACAG-AG-TGCGA--T-AATAC----T--TC-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGAaaca
gi|20 : agtaaT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACT
gi|20 : CCAGCT-TTGACA-CTACT-AC----GCCTCACTGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCacgcctcactgatagccagcatggattcaggaagcgtcgctcaactgaaacccaactctaatagatctatcagcgagtgatttgtcaa
gi|21 : tgaaggaagcatcacaccaaatagctTGCC---GC--CCGGAT-G----TAGACGACTCTGTAG---GCTT--TT-T-----ATTT-------AC----C-TTTTT-------ATCT-GTTTTA-ACAT-GCACTG------TA-CATAG-CTGTT-CA-C-CAACCT---CA-------CAAAG-AG-TGT----T-AATA---------T-----AG-----AA-T-GCGCT--A----A--A-CGGAAGtaatagatctatcagcgagtgatttgtcaa
gi|24 : -T-----TATTT---TT-AG----C-TTTTT-------ATCT-ACTTTA-AAGT-GCACTG------TA-CATAG-ATGTT-CA-C-CA-CCT---CA-------AAAAG-AG-TGCGA--T-AATAC----T--TA-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAG
gi|25 : tataTGTAAAGTGCTACGG--GACAAGTACGGGATACCAATTGGAAA-TCTCCA----ATGGTCGCCAAATACAAAATCCACAGCCAAGTCC--GAAGGCC-CAGTTGACTTTGC-AAA
gi|26 : t-TTTTT-------ATCT-ATTTTA-ACTT-ACACTG------TA-CATAG-ATGTT-AA-A-TACCCT---CA-------CACAG-AA-TGCGA--T-AATACT---T--TT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
gi|27 : gttaACTG------TA-C-TAG-ATGTTTCA-C-C-CCCA---CAAACACAACACAG-AGATGCGAACT-AGAAC----T--TC-----AGTGGT-AAATAGCACT--A----A--AGCGGAAGAAGA
gi|28 : GAGACCGAAGTTT-CTAGTTATCCTACTG-CCAGTGTC----AC------ACCCAT-------GT--GCAGTAAGGTCAAGGAAC--ATAGTCCCTGGTCTTTTCATTg
gi|29 : GAGACCGAAGTTT-CTAGTTA-TCTACCTGCCAGTGTC----AC------ACCCAT-------GT--GCAGTAAGGTCAAGGAAC--ATAGTCCCTGGTCTTTTCATT
gi|3 : ATGTGAACAACATCG-TCATGAATGAGGACC-ATGGAC---CAAAACGGTCTGTGG-----AGCTTTATTAAAAGCAAA-CAAACAGATGCCTGTG----GGGCTGCTCCGTTAAAGAGGGAGGGCATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCC----ACAA--TTTACATCCG----TATT-CA-CCTCGGAGAATACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTTCCCAACACCACAGTCGATCAAGATGGCG-TAGAGAAAC-CCCTACGT----CAGCTCAACCCCCATAAAGCTACAAGTCCGAACAAGGT-CTAATCAAGATTACT---GACG---GAAACATCACAACAA-------ATAGCACCAGC---TTTGACACTACTTTTTCAAGCTTCATTAGACTACTTAAGGCAAGACCCCAGAT-GAAC-GGAAGTCGGCCAACATCATGCCACTATGCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCCGTGTA----ACT---G-ACCTCT-------GTTTGCAACAAGGTCATGGAACTTATAGTCCACAGCCATACCATTAGCCA-CT-TGGACAGCCATGGAC----TCCTAACTGATAGTC----AGCATGGGTTCAAGAA-GGGTCTCTCAACTG-AAT---CCCAATTCATCCTGTCAGTTC-ATGATCTCGCAAGGGGCCTAGACATAAGGGA-GCAAGTGAACTG-TGT--------ACTTC--------------GGTAATGTCCCACACAACC---G------ACTA-CTAATGA
gi|30 : cgaagatgacataatagcgttttaaccagctctagatcacaaagaccttcaaagattgtctaggagaaaggatcacgctttttaaaaaaatacccgaagaccaactccacacgttattaatcgtgctataaagaccttgaatactgtacatgtgcaatgcaaactcagatacgaggaat-GCAGTG------TAACATCT-ATGCT--A-C-CACCCT---CA-------CACAA-AG-TGCGA--T-AATAC----T--TTAAA--AGTGGT-AA-T-GCATT--A----A--ACCGGAAGA
gi|31 : TACAGC-GAC--GCCAAGATGAAGGC--AGATATCCTTAA--CCA----GGAA--TTTACATCAG----TATT-CA-CCT-------CACT---GCGGTACCtg
gi|33 : tgtcG-ATGTC-CA-C-CACCCT---CA-------CACAG-AG-TGTGA--T-AATAC----T--TA-----AATGAT-AA-T-GCACT--ACTGTAACACCGGAAGAAGA
gi|34 : ATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AA-TGCAA--T-AATAC----T--TT-----AAAAGTAAA-T-GCACT--A----A--ACCAGAAGAAGag
gi|35 : TCCGTCGAGGAAGGGCCCAAG-TT-AT-TA-TGC-TGTA-C-AGGATAGTTTAT-CA--GATAGTGGACATC
gi|36 : TGC-GAAGTACCTT-GGCTTGACTATT-CATAATTTAAGAACCTT-AGCGGGGATATGCAC-AT
gi|37 : ATCTTCAGTGTCTT---CTACCACTA----GAC--------------TATTGTCTGATGTACAGGAGGATCAAGACAC
gi|38 : ----TAGACGACTCTGTGT------------T-----ATTTT---AT-AA----C-TTTTT-------ATCT-ATTTTA-ACAT-GCACTG------TA-CAT
gi|39 : -------CAAAG-AG-TGCAA--T-AATGC----T--TC-----AGTGGT-GA-T-GCA----A----A--A---GAAAAAGA
gi|4 : AAGAGCCTAGACATAGGGGA-GCAGGTAGACTA-TGTGCTTGTGGATTTCTCC--AAGGCCTTTGATAAAGTCCCACACAACC---G------ACTA-CTTATGAAACTGCATCACTACGGCATCAGGGGCCGCACTCATG-----ATTATATCT-----------ATTGGGAGCACACAACGTG-TTGTAC-TCGATGGTCAGTAGTCATCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGACCCGCTGTTCTTCCTAATTTTCATCAATG---ACCTGTCATCATCAGTGTCTT---CTACCACCA----GACTATTTGCTGATGATT---ATCTGATGTACAGGAGGATCAAGAAAAC--ACAGGGAACAGGAGGCTTTGCAGAGCCGACAATCAAATAAAACTACAGCA--GGGAGGACCGA-GGCTTATGCAGTTCAACCGCGATAAATGCGAAGTGCTACGG--G-----TA-----TACCAAGCGGAAATTCCCCA----ATGCCCG-CGAATACAAAATCCAC-GCAAAGTCCATTAA-ACACCAGTTGACTCTGCAAAAGTACCTTGGGCTTGACTATTCCA-----TAAGAACCTTCAGCTGGGATACGCACAATAGATACGATCACCAGCAAGGCAATCTCCACTCTCGGCTTCCTCGGCAGAAACATCAGCA--AGAT----GCCCAAAACCCACCATCAAAGGCACAGTGCTT-ACTTCATTTGCTTTGGTGGCGACCCACC-TCGAA-TATGCTTGCCAGCGTTGT-TGAGCCCAGCCACACAAAAAG-GAGAATATTAAGAAACTC-GAGCGCAGTTGCAGCGTAGGGCAGCCAGCATGTTTGCACTTGTG----AAAATTACTCAAGCGCACATAAGGCAGTGTA------ACATC---TATGCTAC-tgacgaag
gi|5 : CCTCGACAGAAACATCAGC---CAAT----GCCCAA---CCACCATC-GAGGCACTGTGC-T-ATTCCA----CGCTAGT-GCGACCCACCATTG-AATATGCCT-CCAGCG-TGT-GGAGCCC-GA----CAAGAAA-GAGAACATCAACAAACTC-GAG-GCCA-TACAGCGTAGGGCAGTTAG---ATTCGC-CAT-CG----AAGATTAT-CAA-AGTAC---AAGCAGTGTACTGTAAACATCT-AT---CTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TAC-TA-CAG-CAAGCA-TCACTGCGGATCAGAGGC-CACTCCCTGCGATTT-CTTAACCCACACACCAGGACGACGGTG-TACA-AGGACC-CCTTC----CCCCAAG--GT-C--------AGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACCAGCTAG-CTG-TCC-GGTGCC---GC--CCAGC
gi|5 : TTT---TA-AA----C-TT----------ATCT-ACTTTA-ACGT-GCACCG------TA-CATAG-ATGTT-TA-C-Ccttttggttttaagaaaaaaaaaaaaaaaccggaccttccctgtaaaatgttttaaacttatctactttaacgtgcaccgtacatagatgtttacc
gi|6 : cctcgacagaaacatcagccaatgcccaaccaccatcgaggcactgtgctattccacgctagtgcgacccaccattgaatatgcctccagcgtgtggagcccgacaagaaagagaacatcaacaaactcgaggccatacagcgtagggcagttagattcgccatcgaagattatcaaagtacaagcagtgtactgtaaacatctatctacagcaactccagtggcagtcactccagctccgtcgggaaagggcccaagtcattatgctatacaggatagtttatcagatagtggacatcccggcggtgagctactacagcaagcatcactgcggatcagaggccactccctgcgatttcttaacccacacaccaggacgacggtgtacaaggaccccttcccccaaggtcagaacaagttaccagggggcgcagtggaggccaagaccctggacagctttaagaaccagctagctgtccggtgccgcccagccttttggttttaagaaaaaaaaaaaaaaaccggaccttccctgtaaaatgATGTGAACAACATTA-TCATGGATGAGGATC-ATAAGC---CAAAACG-CTTGTGG-----AGCTTTATCAAAAGCAAG-CGCACGGATGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTACGTACATT-GAC--GCCAGGGTGAAGGC--AGATAGCCGTAA--TCG----GCAA--TTTACATCTG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTTCCCAACATCACAGTCCATAAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAATCTACAGGCCCGGACGAGGT-CTCGTCAAAACT-CT-------------------CATGAA-------ATAGCTCCAGC---TTTGACAATACTTTTTCAAGCTTCATTAGAC----CAAGACAAGGCCCCAG
gi|7 : gaaaatgacatcacagcgctttaaccagccctggatcacaagagacctgaaacagttgtctaggagaaaggatcgtgcttttaaacgatactccaagaccaactccacacgtgattactcgtgctataaagaccttaaaaatgctgtacatgtgcaatgcaaactcagatatgaggagtGGCAGAAACATCAGC---CGATCGATGCCCAA---CCACCATC-AAGGCACAGTGC-T-ACTCCA----CCCTGAT-GCGACCTACCATT-------------CAGCA-TGT-AGAGCCCAGC----CAAGAAT--AGAACATCAATAAACTC-GAG-GCCG-TATTGTGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAA-CAA-CGCAC---------------------------TATGCTAC-AGCAA--CTCCAATGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGACCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTAAT-CA--GATAGTGGACATCCAGGCGGTGAGC----TACCTT-CAA-CCAGCT-TCACTGTGGACCAGAGAC-CAC-----------------------ACACCAGGACGACAGCG-AACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGAA----GTAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCA-GGTGCC---AC--CCAACT-A---------------GTGT---GTTTGGTTGT-----TTTTTAAATT-AA----T-TTTTTTTTTTA-ATCT-ATTTTA-ACGT-GCACTGTACATATA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAA-AG-TGCGA--T-
gi|8 : tgAGCATC-GCGATCGAT----GCCCAAA--CCACCA-C-AAGGCACAGTGC-TTACTCCA----CCCTGAT-GCGACCTACCA-------AT-----TCAGCA-TGTTAGAGCC--AT----CAAGAAT-ATGAACATCAATAAACTCCGAG-GCCG-TACTGTGTAGGGCAGCCA----ATTCCC-CAT-TG----GAGATTAC--AA-CGCAC---------------------------TATGCTACCAGCAAACTTCCAAGGGCAGTCACGTCCAGCTCCGTCGG-AAAGGGACCAA--TCGAT-TA-TGC-TATA-CCAGAATAATTAAT-CAAAGATAGTGGACATCCAGGCGGTGAG-----TACCTG-CAAACCAGCT-TCACT-TGGACCA-AGAC-C----------------------CACACACCAGGACGACAGCGACACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTCATGGAACAAGTT-ACCAGAAG----TAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AGTCTG-TTCAGGTGCC---AC--CCAAC-------TAG-------TGTGTTTGGTTG--TT-T-----TTTTTAAATT-AA----T-TTTTTTTTATTAATCT-ATTTTA-ACGT-GCACTGT-----TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAA-AG-TGCGAT-T-AATtaa
gi|9 : ATGTGAACAACATTG-TCACGAATGAGGACC-ATAAAC---CAAAACG-CCCGTGG-----AGCTTTATTAAAAGCAAA-TGCACGGACGCCTGTG----GGGTTGCACCATTAAAGCGGGAAGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCTG----TATT-CA-CCTCGGAGATCACA---GCGGAGCCACTACCAG--ATA-TAGTGATTAGCTCACA---TCCAAC-AGTCTCCAACATCACAGTCCATCAAGATGGGGATAGAGAAAC-TATTACGT----CAGCTCAATCCCCATAAAATTACAGACCCGGACGAGGT-CTCATCAAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTAC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|22 ): ATGGCTTTTACAAAAACAATCCTGTGATTTCCAACTTATTCACACCATTCAAACCTGGACTGGTACTGACAACTCTTCAAAGATGGATGCCATCTTACTCGATATCTCCAAGGCGTTCGACGAG
Unaligned ( gi|23 ): CACAGCTCCATCATTCGATCACAATGATCTATCTGACATGCAGCATGGTTTCCGCAAACAACGATCCTGCGAATCTCAACTCAGTTATCCTCACCATCCACGGCCTGGCGAAAG
Unaligned ( gi|32 ): CAGCGCTTTAACCAGCCCTGGATCACAAGATACCTGAAACGGTTGTATAGGAGAAAGGATCGTGCTTTTAAACGAT
Unaligned ( gi|40 ): CCAGTATAATTAACTTCTGTACATGCAAATTACTGGAACATGTCATATGCA
Alignments
lowQualScore : 111 111 11111 1111 1111 1111 111 111 1111 1111111 1111 1111 111111 222222222 1 1111 1111 111 1111 2222222222 44444 222222222 1 1 1111 5555555555555555555555555555555555555 11 1 1 1 1 1 666666666666666 1111 11 22222 111 1111 111 1111 444444444444 1111 111 11111 11111 2222222222222222 1111 111111 3333333333333333333333333333333333333 1111111 111111 222222
lowQualScore : 111 6 1 111 2 6 66666 3 6 7777 0 5 77 77 77 2222 77 1 2222 5 5 0 3 000 99 6 1 111 6 1 6 6 4444 1 5 1 44 3 777 777 9 1 3333333 777 0 1 0000 77 5 5 22 0 11 444 44 5 2 1 0000 999999 000000000 6 6 0 2 1 1 1 5 6 1 2222 1 2222 5 6 111 8 0 6 6 6 1 2 6666 1 0000000000 6 0 0 11111 3 0 888888888 1 55 0 0 0 2 3 2 22 22 3 66 7777 3 5 2222222222222222222222222222222222222 33 0 3 3 3 3 6 7 000000000000000 0 8 7777 3 3 11 8 8 88 8 3 8 00000 8 1 1 8 1 66 3 2 0 3 888 4444 888 6 6 6 4444 6 0 111111111111 6 6 44 2222 88 1 5 5 5 000 5 5 22222 5 5 22222 0000000000000000 5 77 5 4 4 4 4 4 666 4 66 2 0000 5 5 5 5 3 0 5 0 5 5 5 77 5 5 5 777 888 5 9999 4 4 4 777 55 000000 1 0 0000000000000000000000000000000000000 8888888 3 3 2 000000 2 2 2 2 2 444 8888888 2 2 55 2 9999 44 000000 3 3 6 44 6666 44 3
lowQualScore : ... . . ... . . ..... . . .... . . .. .. .. .... .. . .... . . . . ... .. . . ... . . . . .... . . . .. . ... ... . . ....... ... . . .... .. . . .. . .. ... .. . . . .... ...... ......... . . . . . . . . . . .... . .... . . ... . . . . . . . .... . .......... . . . ..... . . ......... . .. . . . . . . .. .. . .. .... . . ..................................... .. . . . . . . . ............... . . .... . . .. . . .. . . . ..... . . . . . .. . . . . ... .... ... . . . .... . . ............ . . .. .... .. . . . . ... . . ..... . . ..... ................ . .. . . . . . . ... . .. . .... . . . . . . . . . . . .. . . . ... ... . .... . . . ... .. ...... . . ..................................... ....... . . . ...... . . . . . ... ....... . . .. . .... .. ...... . . . .. .... .. .
lowQualScore : 000 7 5 777 5 7 77777 7 7 0000 6 7 99 99 99 1111 99 0 1111 7 7 7 0 000 22 7 0 777 7 5 7 7 2222 4 0 0 44 4 000 000 8 2 0000000 888 8 4 6666 11 7 4 00 7 66 999 88 0 2 0 6666 444444 999999999 5 5 5 0 0 2 4 7 6 7 1111 4 1111 7 7 777 0 8 7 7 4 5 5 5555 8 8888888888 7 8 2 88888 2 2 222222222 2 22 0 8 0 0 2 5 88 88 0 88 8888 2 6 2222222222222222222222222222222222222 88 0 3 3 3 3 7 3 222222222222222 2 0 0000 2 2 00 0 0 88 0 2 0 00000 0 0 4 0 0 88 0 5 2 2 333 2222 333 7 7 7 2222 7 3 000000000000 7 7 22 1111 77 0 7 7 7 000 7 7 66666 0 0 88888 6666666666666666 0 99 7 4 4 4 4 4 222 4 11 5 6666 0 0 0 0 1 2 0 2 0 0 0 55 0 0 0 888 888 0 4444 4 4 4 000 55 333333 6 5 2222222222222222222222222222222222222 8888888 1 1 9 333333 7 5 5 5 5 777 1111111 5 5 99 5 6666 22 111111 1 1 2 22 5555 22 5
consensus : NNNNNATGTGAACAACATCG-TCATGGATGAGGACC-ATAAAC---CAAAACG-CCTGTGG-----AGCTTTATCAAAAGCAAA-CGCACGGACGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCNG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTCCCCAACATCACAGTCCATCAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAAGCTTCATTAGAC----CAAGGCAAGGCCCCAGAC-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCNGTGTC----ACT---G-ACCTNT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACGGCCNTATCATTAGCCA-CT-TGGACAGCCACGGAC----TCCTCACCGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTCGCAAAGAGCCTAGACATAGGGGA-GCAAGTGGACTG-TGTGCTTTTGGACTTCTCC--GAGGCCTTTGATAAAGTCCCACACAACC---G------ACTA-CTGATGAAACTACATCACTACGGCATCAGGGGCCGCACCCATG-CA--ATTGGATCTCGAGTTTCCTTATTGGNCGCACACAGCGTG-TTGTAC-TCGATGGTCAATCGTCGTCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCCGCTGTTCTTCCTGATTTTCATCAACG---ACCTGTCATCATCAGTGTCTT-G-CTACCACCA----GAC--------------T---GTCTGATGTACAGGAGGATCAAGACACC--ACA-GGACCAGGAGGCTTTGCAGAG-CGAC-CTC-AAT-AAACTACAGCAGTGGGAGGACCGATGGCTTATGCAGTTCAACCCGGATAAGTGCGAAGTGCTACGG--G-----TA-----TACCAACCGGAAA-TCCCCA----ATGCTCGCCGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-GAAGTACCTT-GGCTTGACTATT-CA-----TAAGAACCTT-AGCTGGGATACGCAC-ATAGATAANATCACCAAGAAGGCAAACTCCACTCTGGCCTTCCTCGGCAGAAACATCAGC---CGAT----GCCCAA---CCACCATC-AAGGCACAGTGC-T-ACTCCA----CCCTGGT-GCGACCTACCATCG-A-TATGCCT-CCAGCG-TGT-GGAGCCCAGC----CAAGAAN-GAGAACATCAANAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-ATATGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTGT---GTTT--TT-T-----TTTTT---TT-AA----C-TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--TT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
Reference ( family-301 ) : NNNNNATGTGAACAACATCG-TCATGGATGAGGACC-ATAAAC---CAAAACG-CCTGTGG-----AGCTTTATCAAAAGCAAA-CGCACGGACGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCNG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTCCCCAACATCACAGTCCATCAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAAGCTTCATTAGAC----CAAGGCAAGGCCCCAGAC-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCNGTGTC----ACT---G-ACCTNT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACGGCCNTATCATTAGCCA-CT-TGGACAGCCACGGAC----TCCTCACCGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTCGCAAAGAGCCTAGACATAGGGGA-GCAAGTGGACTG-TGTGCTTTTGGACTTCTCC--GAGGCCTTTGATAAAGTCCCACACAACC---G------ACTA-CTGATGAAACTACATCACTACGGCATCAGGGGCCGCACCCATG-CA--ATTGGATCTCGAGTTTCCTTATTGGNCGCACACAGCGTG-TTGTAC-TCGATGGTCAATCGTCGTCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCCGCTGTTCTTCCTGATTTTCATCAACG---ACCTGTCATCATCAGTGTCTT-G-CTACCACCA----GAC--------------T---GTCTGATGTACAGGAGGATCAAGACACC--ACA-GGACCAGGAGGCTTTGCAGAG-CGAC-CTC-AAT-AAACTACAGCAGTGGGAGGACCGATGGCTTATGCAGTTCAACCCGGATAAGTGCGAAGTGCTACGG--G-----TA-----TACCAACCGGAAA-TCCCCA----ATGCTCGCCGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-GAAGTACCTT-GGCTTGACTATT-CA-----TAAGAACCTT-AGCTGGGATACGCAC-ATAGATAANATCACCAAGAAGGCAAACTCCACTCTGGCCTTCCTCGGCAGAAACATCAGC---CGAT----GCCCAA---CCACCATC-AAGGCACAGTGC-T-ACTCCA----CCCTGGT-GCGACCTACCATCG-A-TATGCCT-CCAGCG-TGT-GGAGCCCAGC----CAAGAAN-GAGAACATCAANAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-ATATGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTGT---GTTT--TT-T-----TTTTT---TT-AA----C-TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--TT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
gi|1 : ATGTGAACAACATTA-TCATGGATGAGGACC-A----C---CTAA----CCTGTGG-----AGCTTTATCAAAAGCAAATCGCACGGATGTCTGTGCATGGGACTGCACCATTAAAGAGGGGGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGGTATCCTTAT--TCA----GCAA--TTTACATCTG----TATT-CA-CCTTGGAGAGCACTACTGCGGAACCACTACCAG--ATA-TGTGAATTAG------------------TTCCCAACATCACAGTTCTTCAAGATGGGG-TAGAGAAAT-CCCCACGT----CAGCTCAAACCCCATAAAGCTACAGGCCCGGACTGGGT-CTCACCAAGATTACT---GAAG---GAA-CATCTCACCCA-------ATAGCTCCAGC---TT-GACACTACTTTTCCAAACTTCATTAGAC----CAAGGCAAGACCCCAGAT-GAAT-GGAAGTTGGCCAACATCACGCCGCTATTCAGGAAGTGAGA---------ACCA-----ACTATCGACCCGTGTC----ACT---G-ACCT---------GTTTACATCAAGGTCATGGAACATATAGTCCACAGCCATATTATTAGTCA-CT-TGGACAGCCATGGAC----CCCTCACCGATAGCCTGTCAGCATGGATTCAGGAA-GCGTCGTACAACTG-AAA---CCCAATTCATCCTGTCAGTTC-ATGACCTCGCAAAGACCCTAGACATAGGGGA-GCGAGTGGACTG-TGTACTTTTGGACTTCTCC--AAGATCTTTGATAAAGTCCCACACAGCC---GGCCCCGACTA-CTGATGAAACTACATCACTACGGCATTAGGAGCCGCACAAATG-----ATTGGATCTCAAATTTCCTTAATGGCTGCACACAGCGTG-TTATGC-TCGATGGTCAATCGTCATCAGCCGCTGCCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCGGCTGGTCTTCCTGATT---GTCTACT---ACC-------ACCAGACTCTTTG-CTG--AT------GAT--------------T---GTCTGATGTATAGGAGGATCAAGACGCT--ACA-GGACCAAGAGGCTTTGCAGAG-CGAC-CTC-AAT-AATTTACAGCAGTGGAAGGAGCGATGGCTTATGCAGTTCAACCCGGACAAGTGCGAAGAGCTACGGCCG------A-----TACCAACCGGAAA-TCCCCATGCAATGCTCGCAGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-AGAGTACCTT-GGTTTGACTATT-CA-----TAAGAACCTT-CGCAGGGATACGCAC-ATAGATAAGATCCCCAAGAAGGCAAACTCCACTCTGGCCTACCTTGGCAGAAACATCAGC---CGAT----GCCCAA---CAACCATC-AAGGCACAGTGC-T-ACGCCA----CCCTGGT-GCGACTAACCATCG-A--ATGTCA-CCAGCG-TGT-GGAGTCTAGC----CAAG----GAGAACATCAATAAACTC-AAG-GCCG-CACAGCGTAGGGCAGCCAG---ATTTGC-CAT-TG----GAGATTAC-CAA-CGCAC---AGGCAGTGTA------AAA--T-GTATGCTAC-AACAA--CTCCAGTGGCAGTCAC-TCCAGCTCTGTCGGGGAAGGGCCCAAG-TC-AT-TA-TGT-TATA-T-AGGATAGTTCAT-CA--GATAGTGGATATCCCAGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGAGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGGAAGTG-TATA-AGACCT-CCTTCTTCCCCCCAAGCCAT-CCGGCTC-AGGAACAAGTT-ACCAGGAGA-AGCAGT--------AGAC---CCTGG----------AAAACC----TG-CTG-TCC-GGTGCC---GC--CCAGCT-C----TAGACGACTCGATCT---GTTT--TT-TGGTGGTTTTT---TT-
gi|1 : tcaaggagaaaacatcgtgcttttaaacgatactcaaagaccaactccacacgtgattactcgtgctatagagaccttaaaaatgctgtacatgtgcaatgcaagctcagatatgaggagtTTTGTGT---TTTT--TT-TTTGG-TTTTT---TT-AAAATGC-TTTTT-------ATCT-AATTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-GG-TGCGA--T-AATttggggggggggtgtgtgttttttttttgtgttttttttttggtttttttaaaatgctttttatctaatttaacgtgcactgtacatagatgttcaccaccctcacacagggtgcgataat
gi|10 : tcaaggagaaaacatcgtgcttttaaacgatactcaaagaccaactccacacgtgattactcgtgctatagagaccttaaaaatgctgtacatgtgcaatgcaagctcagatatgaggagtatgtgaacaacattatcatggatgaggaccacctaacctgtggagctttatcaaaagcaaatcgcacggatgtctgtgcatgggactgcaccattaaagagggggggtattgcgtacagtgacgccagggtgaaggcaggtatccttattcagcaatttacatctgtattcaccttggagagcactactgcggaaccactaccagatatgtgaattagttcccaacatcacagttcttcaagatggggtagagaaatccccacgtcagctcaaaccccataaagctacaggcccggactgggtctcaccaagattactgaaggaacatctcacccaatagctccagcttgacactacttttccaaacttcattagaccaaggcaagaccccagatgaatggaagttggccaacatcacgccgctattcaggaagtgagaaccaactatcgacccgtgtcactgacctgtttacatcaaggtcatggaacatatagtccacagccatattattagtcacttggacagccatggacccctcaccgatagcctgtcagcatggattcaggaagcgtcgtacaactgaaacccaattcatcctgtcagttcatgacctcgcaaagaccctagacataggggagcgagtggactgtgtacttttggacttctccaagatctttgataaagtcccacacagccggccccgactactgatgaaactacatcactacggcattaggagccgcacaaatgattggatctcaaatttccttaatggctgcacacagcgtgttatgctcgatggtcaatcgtcatcagccgctgccgtttcatcaggagtccctcagggaactgtcctaggccggctggtcttcctgattgtctactaccaccagactctttgctgatgattgtctgatgtataggaggatcaagacgctacaggaccaagaggctttgcagagcgacctcaataatttacagcagtggaaggagcgatggcttatgcagttcaacccggacaagtgcgaagagctacggccgataccaaccggaaatccccatgcaatgctcgcagaatacaaaatccacggccaagtcctaaatacagttgactctgcagagtaccttggtttgactattcataagaaccttcgcagggatacgcacatagataagatccccaagaaggcaaactccactctggcctaccttggcagaaacatcagccgatgcccaacaaccatcaaggcacagtgctacgccaccctggtgcgactaaccatcgaatgtcaccagcgtgtggagtctagccaaggagaacatcaataaactcaaggccgcacagcgtagggcagccagatttgccattggagattaccaacgcacaggcagtgtaaaatgtatgctacaacaactccagtggcagtcactccagctctgtcggggaagggcccaagtcattatgttatataggatagttcatcagatagtggatatcccagcggtgagctacctacaaccagcatcactgaggaccagaggccactccctgcgatttcttgttccacacaccaggacggaagtgtataagacctccttcttccccccaagccatccggctcaggaacaagttaccaggagaagcagtagaccctggaaaacctgctgtccggtgccgcccagctctagacgactcgatctgttttttggtggtttttttttggggggggggtgtgtgtttttttGC----CAAAAAATGAGAATATCAAGAAACTC-GAG-GCCG-TGCAGCGTAGGGCAGCCAG---A-------------------ATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-AT--GCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TACCTA-CAA-CAAGCA-TCACTGCGGAACAGTAGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGGAAGTG-TACA-AGACCT-CCTTCTT-ACCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTGT----TAT--TT-T-----T------------------TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-GATAG-ATGTT-CA-C-TACCCT---CA-------CACAG-AG-TGTGA--T-AATAC----T--TTTTAAAAGTGGT-AA-T-GCACT--A----A--ACCGGGAGAAGA
gi|11 : TTTTTGACTTTTCA--AAGGCCTTTAACAAGGTCCCACACATTC---G------ACTG-CTGATAAAGCTACATCATTATGACATCCGAGGACGCATCCATGACA--A---GATAACAAG-----TTACAGGGTGTACAGAACGTGTTTGTCCTTTGATAGTCAATCATTGCCCGCTACCATCATTTCATCCAGAG----TCAGGAAAACAT-TTA----------TCTTCTTGATGTACATAAATGAGAAATTGTC-TCATCAACCACTC-GACTATTTGCAAGACGAC--------------T---GTCTTATGCACAGAAGGACCAGGTCATCTTATA-GG
gi|11 : aAG-TCCCCA----CTACTTGTTGGCTAGCTTATCCATGGCCATGTAC--TTT-TTA-TGATCAACTGTGT-TAAATACCTC-CACTTCACCTTT-CA-----CAGGAGCATC-GGCTGAGATATGAAC-ATAGACGATATCACCAAGAAGGCAAACGCCACTTTgataactcaaaaagctccaacagtgattaatggagaatcaagtgcacaaaagagtccccactacttgttggctagcttatccatggccatgtactttttatgatcaactgtgttaaatacctccacttcacctttcacaggagcatcggctgagatatgaacatagacgatatcaccaagaaggcaaacgccacttt
gi|12 : atttttgacttttcaaaggcctttaacaaggtcccacacattcgactgctgataaagctacatcattatgacatccgaggacgcatccatgacaagataacaagttacagggtgtacagaacgtgtttgtcctttgatagtcaatcattgcccgctaccatcatttcatccagagtcaggaaaacatttatcttcttgatgtacataaatgagaaattgtctcatcaaccactcgactatttgcaagacgactgtcttatgcacagaaggaccaggtcatcttatagggataactcaaaaagctccaacagtgattaatggagaatcaagtgcacaaaagAGGTCCTGACGAACTGCTCACCG-GCTTACTCTGAAAA---GAA--ATTAC--CAATGGTATCACAACCGCA-C---TT--ACACTTGTCTTCTAAGCTGCAATACAC----CAAGA-AAGAACCCCTAC-AAATTGGAATACAGCTACAATAACACCAATCTTCAAGAAGGGAGACAATAGCAAACCATTTA-ACTATCTTCCAGTGTTTTTAACTCCAGTATCTTTAACTTCAGTATGCTGCAAAGTACTGGAACATGTTATACACAGCTCCATCATGAGGTT-CTCTAACCAG-CACAATA----TTATATCTGACATGC----AGCATAGATTCTGCAA-ACAACGATC--CTGCAAATATCTCATCTTATCCTCACCATCCAATG-CCTGGCGAAAGGGATAGACA-ACAAAATCCAAATTGA-TGCTGTGCTCCTCGAATTTTCT--TAGGCGTTTGACAAAGTACCATAC--CCAGTG------GCTAGCTAA-AAAAC-ACAACAC
gi|13 : ATGTGAACAACATCGATCAATGATGGAGACCGATGAACGAACAAAA-G-CTTTTAATACTCAGCTTT---AATAGCAGA-TGaatg
gi|13 : tttgaagaccaactccacaacgtgattaactcgtgttataaagacctaaaaatgctgttaacaaatgtgcagatactggtcagtagtGGGTACTGTCTACAGTTGACCAGCCAAGATGA-GGCCAAGATATTCTTAAGCCCA----GCAAAGTTTACATCGAAAGATATTACAACCTC-------ACT---GCGGTACCACTACCAGCTATAATGGAAATTAGCCCACACAGTCCAACCAGTCCCCATCAGCACAATCCATCAAAAATGGG-TAGAGAATCGTCCTACATACATCAGCTCAGCCCCCATAAAGCTACAGGCCCG---------------------------AAAG---AAAGCGTCACACCAG-------ATAGCTCCAGggtactgtctacagttgaccagccaagatgaggccaagatattcttaagcccagcaaagtttacatcgaaagatattacaacctcactgcggtaccactaccagctataatggaaattagcccacacagtccaaccagtccccatcagcacaatccatcaaaaatgggtagagaatcgtcctacatacatcagctcagcccccataaagctacaggcccgaaagaaagcgtcacaccagatagctccagnnnnnnnnnnnnnnnnnnnnnnnnnctactgtctacagcgacgccaagatgaa
gi|14 : tttgaagaccaactccacaacgtgattaactcgtgttataaagacctaaaaatgctgttaacaaatgtgcagatactggtcagtagtatgtgaacaacatcgatcaatgatggagaccgatgaacgaacaaaagcttttaatactcagctttaatagcagatAGATTAC-TAA-CGCAC---AAGTAGTGTA------ACATCT-AT--GCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-G-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGTGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGGCCAGAGGC-CACTCCCTGCAATTT-CTTGTTCCACACACCAGGACGGAAGTG-TACA-AAATCT-CCTTCCT-CCCCAAAGCCAT-CCGGCCC-TGGAACAAATT-ACCAGGGGG-TGCAGTGGAGGGCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-GTACATAGACGACTCTGTGT----TAT--TT-T-----T------------------TTTTT-------ATCT-ATTTTA-ACTT-GCACTG------TA-CATAG-ATGTT-CA-C-TACCCT---CA-------CACAG-AG-TGTGA--T-AATAC----TTATT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGAnnnnnnnnnnnnnnnnnnnnnnnnnctactgtctacagcgacgccaagatgaa
gi|15 : AAGGACCCAAGGTC-ATGTAATGCATATAAC-AGGATAGTTTATGCA--GATAGTGAACATCC-GG-GGTGAGC----TACCTAACAA-CCAGCAATCACTGCGAACCAGAGGCACACTCCCTGCGTTTTTCTTGTTCCACACACCAGGACGACAGTG-TACATAGACCTGCCTTCTT--CCCCAAGCCATCCCGGCTC-TGGAACAAGTTGACCAGGGGGCCGCAGTGGAGGCCAAGACCTGCTTGGATCAGCTTTAAGAACC----AG--TGTTCC-GGTGCCTATGCCTCCAGTTGG----TAGAAAA--CTG---------------T-----TATTT---TT-AG----CTTTTTT-------ATCTAATTTTACACGT-GCAC-G------CA-CATAG-ATGTT-CACC-CAACCTCAACA-------CACAGAAA-TGCGA--TGAATACATTAT--TA-----AGT-GT-AA-TGGCACTAAA----A--ACCGGAAGAAGa
gi|16 : T---GAGG---GAAATATCTCACCAA-------ATAGCCTTAGC---TTTGACACTACTTTTCAAAGCTTCATTAGAC----CAATGCAAGGCCCCAGAT-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCCA-ACTATCGACCCGTGTC----ACT---G-ACCTCT-------GTTTGCAGCAAGGTCATGGAACATATTGTCCACAGCCATATCATTAGTCA-CT-TGGACAGCCATGGAC----TCCTCACTGATAGCC----AGCATGGATTCAGGAAGGCATTGCTCAACTG-AAA---CCCAACTCATCCTGTCATTTC-ATGACTTCACACTGAGCCTAGATATAGGGGA-GCAAGTGGACTG-
gi|17 : CTGAACTCACACAAAGTCAGCGGACCGGACCAGAT-ATCCACTATGTTTCT---GAAGTCCATATCATCTGTCC----------TAGCTCCAGCACCTCT--CATCATCTTTC-AAACATCACTCGAT----GAAGACCAAGTTCCTGAT-GACT-GGAAA---------------CCATTATTCAAGAAAGGCGACC--AGAGCACC---TA-ACTACAAACCAGTG--------------A------------GTTTAATGCAAGGTTGTCGAACATATCATCCACAGCCAAGTTATCAACCATCT-TG---AG--ACGAACAACATCCTCATCAATGATC----AGGATGGTTTTCGAAA-ACGTCG
gi|18 : cTTAAGAACC----AG-CTG-TCC-GGTGCC---GT--CCGGCT-G----TA-ACGACT--ATGT---GTTA--TT-T-----TGCTT---TT-A----------------------T-ATTTTA-ACGTTGCACTG------TA-CATAGAATGTT-C--C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--TTTTAA-AGTGGT-AA-T-GCA----A----A--A---GAAGAAGA
gi|19 : TTG-CACTTCTCTTTCAAGCCTCAATACAC----CAAGACA-GGACCTAAACAGACT-GGAACACAACCACAATAACACCGATCCTCAAGAAGGAAGACaga
gi|2 : cccgcttactcaagggatgaccagtgaaattacacATGTGAAACACAT-A-TCATGGATGAGGACC-ATAACC---CAAAACG-CCTGTGG-----AGCTTTATGAAAACCAAA-CGCACGGACATCAGTT----TGTTTGCATCATTAAAGCGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTAAAGGC--AGATATCCTTAA--CCATGCAGCAA--TTTACATCAG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--A-A-TGGGAATTAGTCATTA---TCCAAC-AGTCCCCATCAGCACAATCCATAAAGATGAGG-TTGAGAAAT-TCCTACGT----CAGCTCAACACTCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAATACCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAGGCTTCATTAGAC----CAAGGCAAGGCCCCAGAT-GAAA-TGTAGTCGGCCAACATCACGCCACTATTCAAGAAGGGAGACCGAAGTGCACCAGCCA-ACTATCGACCCGTGTC----ACT---G-ACCTTT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACAGCTCTGTCATTAGCCA-CT-TGGACAGTCATGGAC----TCCTCACTGATAGCC----AACATGGATTCAGGAA-GCGTCGCCCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTTGTAAAGCGCCTAGACATGGGGGA-ACAAGTGGACTG-TGTACTTTTGGACTTCTCCTTGAGGCCTTCGATAAAGCCCTACACAACC---G------ACTA-CTGATGAAACTACATCACTACGGCACCAGGGGCCGCACCCATG-CATGATTGGATCTCGAGTTTTCTTATTGGCCACACACAGCGTG-TTGTAC-TCGATGGTCAATCATCATCAGCTACTACCGTTTCATCAGAAGTCCCGCAGGGAACTATCCTAGGCCCACTGTTCTTTCTAATTTTCATCAACA---ACCTGTCATCATCAGTGTCTT---CTATCACCA----GAC--------------T---GTCTGGTGAACAGGAGGATCAAGACACC--ACA-GGACCAGGAGACTTTGCAGAG-CGAC-CTC-AAT-AAACTACAGCAGTGGGAGGACCGATGGCTTATACAGTTCAACCCGGATAAGTGTGAAGTGCCAGGA--G-----T------CATCAACTGGAAA-TTCCCA----GTGCTCGCCGAATACAAAATCCACGATCAAGTCC--TAA-ATA-CATTTGACTCTGC-GAAGTACCTT-GG-TTGACTATT-CA-----TAAGAACCTT-AGCTGGGATAAGCAC-ATAGATAATATCACCAAGAAGGCA----CCG---TGGCCTTCCTCGGCAGAAA--------------------CCAA---CCACAATC-AAGGCAAAGTGC-T-TCTCTA----CCCTGGT-GCGACCTAACATCA-ATTGTGCTT-CCAGTG-TGT-GGAGCCCAGC----CAAGAGG-GAGAACATTAACAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TGTTCAAAGGTTAC-CAA-AGTAC---AAGCAGTGTA------ACATCTAATATACTAC-GGCAA--CTCCAGTGACAGTCAC-TCCAACACCGTCGGGAAAGGACCCGAG-TC-AT-GA-TGC-TATA-G-AGGATAGTTTAT-CA--GAAAGTGGA-----CGGCGGTGAGCACTGTATCTA-C-A-CCTGCA-TCACTGCGGACCAGAGGC-CACGCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGACTT-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGTTCAAGAC---CCTGGA-CAGCTTTAAGAACC----AA-TTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGATTCTGTGTGG-GTTT--TT-T-----TTTTT---TTAAA----C-TTTTT-------ATCT-ATTCTA-ACGT-GCATTG------TA-CATAA-ATGTT-CA-CACCCCCT---CC-------CACAG-AG-TGCGA--T-AATAC----T--TC-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGAaaca
gi|20 : agtaaT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACT
gi|20 : CCAGCT-TTGACA-CTACT-AC----GCCTCACTGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCacgcctcactgatagccagcatggattcaggaagcgtcgctcaactgaaacccaactctaatagatctatcagcgagtgatttgtcaa
gi|21 : tgaaggaagcatcacaccaaatagctTGCC---GC--CCGGAT-G----TAGACGACTCTGTAG---GCTT--TT-T-----ATTT-------AC----C-TTTTT-------ATCT-GTTTTA-ACAT-GCACTG------TA-CATAG-CTGTT-CA-C-CAACCT---CA-------CAAAG-AG-TGT----T-AATA---------T-----AG-----AA-T-GCGCT--A----A--A-CGGAAGtaatagatctatcagcgagtgatttgtcaa
gi|24 : -T-----TATTT---TT-AG----C-TTTTT-------ATCT-ACTTTA-AAGT-GCACTG------TA-CATAG-ATGTT-CA-C-CA-CCT---CA-------AAAAG-AG-TGCGA--T-AATAC----T--TA-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAG
gi|25 : tataTGTAAAGTGCTACGG--GACAAGTACGGGATACCAATTGGAAA-TCTCCA----ATGGTCGCCAAATACAAAATCCACAGCCAAGTCC--GAAGGCC-CAGTTGACTTTGC-AAA
gi|26 : t-TTTTT-------ATCT-ATTTTA-ACTT-ACACTG------TA-CATAG-ATGTT-AA-A-TACCCT---CA-------CACAG-AA-TGCGA--T-AATACT---T--TT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
gi|27 : gttaACTG------TA-C-TAG-ATGTTTCA-C-C-CCCA---CAAACACAACACAG-AGATGCGAACT-AGAAC----T--TC-----AGTGGT-AAATAGCACT--A----A--AGCGGAAGAAGA
gi|28 : GAGACCGAAGTTT-CTAGTTATCCTACTG-CCAGTGTC----AC------ACCCAT-------GT--GCAGTAAGGTCAAGGAAC--ATAGTCCCTGGTCTTTTCATTg
gi|29 : GAGACCGAAGTTT-CTAGTTA-TCTACCTGCCAGTGTC----AC------ACCCAT-------GT--GCAGTAAGGTCAAGGAAC--ATAGTCCCTGGTCTTTTCATT
gi|3 : ATGTGAACAACATCG-TCATGAATGAGGACC-ATGGAC---CAAAACGGTCTGTGG-----AGCTTTATTAAAAGCAAA-CAAACAGATGCCTGTG----GGGCTGCTCCGTTAAAGAGGGAGGGCATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCC----ACAA--TTTACATCCG----TATT-CA-CCTCGGAGAATACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTTCCCAACACCACAGTCGATCAAGATGGCG-TAGAGAAAC-CCCTACGT----CAGCTCAACCCCCATAAAGCTACAAGTCCGAACAAGGT-CTAATCAAGATTACT---GACG---GAAACATCACAACAA-------ATAGCACCAGC---TTTGACACTACTTTTTCAAGCTTCATTAGACTACTTAAGGCAAGACCCCAGAT-GAAC-GGAAGTCGGCCAACATCATGCCACTATGCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCCGTGTA----ACT---G-ACCTCT-------GTTTGCAACAAGGTCATGGAACTTATAGTCCACAGCCATACCATTAGCCA-CT-TGGACAGCCATGGAC----TCCTAACTGATAGTC----AGCATGGGTTCAAGAA-GGGTCTCTCAACTG-AAT---CCCAATTCATCCTGTCAGTTC-ATGATCTCGCAAGGGGCCTAGACATAAGGGA-GCAAGTGAACTG-TGT--------ACTTC--------------GGTAATGTCCCACACAACC---G------ACTA-CTAATGA
gi|30 : cgaagatgacataatagcgttttaaccagctctagatcacaaagaccttcaaagattgtctaggagaaaggatcacgctttttaaaaaaatacccgaagaccaactccacacgttattaatcgtgctataaagaccttgaatactgtacatgtgcaatgcaaactcagatacgaggaat-GCAGTG------TAACATCT-ATGCT--A-C-CACCCT---CA-------CACAA-AG-TGCGA--T-AATAC----T--TTAAA--AGTGGT-AA-T-GCATT--A----A--ACCGGAAGA
gi|31 : TACAGC-GAC--GCCAAGATGAAGGC--AGATATCCTTAA--CCA----GGAA--TTTACATCAG----TATT-CA-CCT-------CACT---GCGGTACCtg
gi|33 : tgtcG-ATGTC-CA-C-CACCCT---CA-------CACAG-AG-TGTGA--T-AATAC----T--TA-----AATGAT-AA-T-GCACT--ACTGTAACACCGGAAGAAGA
gi|34 : ATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AA-TGCAA--T-AATAC----T--TT-----AAAAGTAAA-T-GCACT--A----A--ACCAGAAGAAGag
gi|35 : TCCGTCGAGGAAGGGCCCAAG-TT-AT-TA-TGC-TGTA-C-AGGATAGTTTAT-CA--GATAGTGGACATC
gi|36 : TGC-GAAGTACCTT-GGCTTGACTATT-CATAATTTAAGAACCTT-AGCGGGGATATGCAC-AT
gi|37 : ATCTTCAGTGTCTT---CTACCACTA----GAC--------------TATTGTCTGATGTACAGGAGGATCAAGACAC
gi|38 : ----TAGACGACTCTGTGT------------T-----ATTTT---AT-AA----C-TTTTT-------ATCT-ATTTTA-ACAT-GCACTG------TA-CAT
gi|39 : -------CAAAG-AG-TGCAA--T-AATGC----T--TC-----AGTGGT-GA-T-GCA----A----A--A---GAAAAAGA
gi|4 : AAGAGCCTAGACATAGGGGA-GCAGGTAGACTA-TGTGCTTGTGGATTTCTCC--AAGGCCTTTGATAAAGTCCCACACAACC---G------ACTA-CTTATGAAACTGCATCACTACGGCATCAGGGGCCGCACTCATG-----ATTATATCT-----------ATTGGGAGCACACAACGTG-TTGTAC-TCGATGGTCAGTAGTCATCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGACCCGCTGTTCTTCCTAATTTTCATCAATG---ACCTGTCATCATCAGTGTCTT---CTACCACCA----GACTATTTGCTGATGATT---ATCTGATGTACAGGAGGATCAAGAAAAC--ACAGGGAACAGGAGGCTTTGCAGAGCCGACAATCAAATAAAACTACAGCA--GGGAGGACCGA-GGCTTATGCAGTTCAACCGCGATAAATGCGAAGTGCTACGG--G-----TA-----TACCAAGCGGAAATTCCCCA----ATGCCCG-CGAATACAAAATCCAC-GCAAAGTCCATTAA-ACACCAGTTGACTCTGCAAAAGTACCTTGGGCTTGACTATTCCA-----TAAGAACCTTCAGCTGGGATACGCACAATAGATACGATCACCAGCAAGGCAATCTCCACTCTCGGCTTCCTCGGCAGAAACATCAGCA--AGAT----GCCCAAAACCCACCATCAAAGGCACAGTGCTT-ACTTCATTTGCTTTGGTGGCGACCCACC-TCGAA-TATGCTTGCCAGCGTTGT-TGAGCCCAGCCACACAAAAAG-GAGAATATTAAGAAACTC-GAGCGCAGTTGCAGCGTAGGGCAGCCAGCATGTTTGCACTTGTG----AAAATTACTCAAGCGCACATAAGGCAGTGTA------ACATC---TATGCTAC-tgacgaag
gi|5 : CCTCGACAGAAACATCAGC---CAAT----GCCCAA---CCACCATC-GAGGCACTGTGC-T-ATTCCA----CGCTAGT-GCGACCCACCATTG-AATATGCCT-CCAGCG-TGT-GGAGCCC-GA----CAAGAAA-GAGAACATCAACAAACTC-GAG-GCCA-TACAGCGTAGGGCAGTTAG---ATTCGC-CAT-CG----AAGATTAT-CAA-AGTAC---AAGCAGTGTACTGTAAACATCT-AT---CTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TAC-TA-CAG-CAAGCA-TCACTGCGGATCAGAGGC-CACTCCCTGCGATTT-CTTAACCCACACACCAGGACGACGGTG-TACA-AGGACC-CCTTC----CCCCAAG--GT-C--------AGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACCAGCTAG-CTG-TCC-GGTGCC---GC--CCAGC
gi|5 : TTT---TA-AA----C-TT----------ATCT-ACTTTA-ACGT-GCACCG------TA-CATAG-ATGTT-TA-C-Ccttttggttttaagaaaaaaaaaaaaaaaccggaccttccctgtaaaatgttttaaacttatctactttaacgtgcaccgtacatagatgtttacc
gi|6 : cctcgacagaaacatcagccaatgcccaaccaccatcgaggcactgtgctattccacgctagtgcgacccaccattgaatatgcctccagcgtgtggagcccgacaagaaagagaacatcaacaaactcgaggccatacagcgtagggcagttagattcgccatcgaagattatcaaagtacaagcagtgtactgtaaacatctatctacagcaactccagtggcagtcactccagctccgtcgggaaagggcccaagtcattatgctatacaggatagtttatcagatagtggacatcccggcggtgagctactacagcaagcatcactgcggatcagaggccactccctgcgatttcttaacccacacaccaggacgacggtgtacaaggaccccttcccccaaggtcagaacaagttaccagggggcgcagtggaggccaagaccctggacagctttaagaaccagctagctgtccggtgccgcccagccttttggttttaagaaaaaaaaaaaaaaaccggaccttccctgtaaaatgATGTGAACAACATTA-TCATGGATGAGGATC-ATAAGC---CAAAACG-CTTGTGG-----AGCTTTATCAAAAGCAAG-CGCACGGATGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTACGTACATT-GAC--GCCAGGGTGAAGGC--AGATAGCCGTAA--TCG----GCAA--TTTACATCTG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTTCCCAACATCACAGTCCATAAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAATCTACAGGCCCGGACGAGGT-CTCGTCAAAACT-CT-------------------CATGAA-------ATAGCTCCAGC---TTTGACAATACTTTTTCAAGCTTCATTAGAC----CAAGACAAGGCCCCAG
gi|7 : gaaaatgacatcacagcgctttaaccagccctggatcacaagagacctgaaacagttgtctaggagaaaggatcgtgcttttaaacgatactccaagaccaactccacacgtgattactcgtgctataaagaccttaaaaatgctgtacatgtgcaatgcaaactcagatatgaggagtGGCAGAAACATCAGC---CGATCGATGCCCAA---CCACCATC-AAGGCACAGTGC-T-ACTCCA----CCCTGAT-GCGACCTACCATT-------------CAGCA-TGT-AGAGCCCAGC----CAAGAAT--AGAACATCAATAAACTC-GAG-GCCG-TATTGTGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAA-CAA-CGCAC---------------------------TATGCTAC-AGCAA--CTCCAATGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGACCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTAAT-CA--GATAGTGGACATCCAGGCGGTGAGC----TACCTT-CAA-CCAGCT-TCACTGTGGACCAGAGAC-CAC-----------------------ACACCAGGACGACAGCG-AACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGAA----GTAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCA-GGTGCC---AC--CCAACT-A---------------GTGT---GTTTGGTTGT-----TTTTTAAATT-AA----T-TTTTTTTTTTA-ATCT-ATTTTA-ACGT-GCACTGTACATATA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAA-AG-TGCGA--T-
gi|8 : tgAGCATC-GCGATCGAT----GCCCAAA--CCACCA-C-AAGGCACAGTGC-TTACTCCA----CCCTGAT-GCGACCTACCA-------AT-----TCAGCA-TGTTAGAGCC--AT----CAAGAAT-ATGAACATCAATAAACTCCGAG-GCCG-TACTGTGTAGGGCAGCCA----ATTCCC-CAT-TG----GAGATTAC--AA-CGCAC---------------------------TATGCTACCAGCAAACTTCCAAGGGCAGTCACGTCCAGCTCCGTCGG-AAAGGGACCAA--TCGAT-TA-TGC-TATA-CCAGAATAATTAAT-CAAAGATAGTGGACATCCAGGCGGTGAG-----TACCTG-CAAACCAGCT-TCACT-TGGACCA-AGAC-C----------------------CACACACCAGGACGACAGCGACACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTCATGGAACAAGTT-ACCAGAAG----TAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AGTCTG-TTCAGGTGCC---AC--CCAAC-------TAG-------TGTGTTTGGTTG--TT-T-----TTTTTAAATT-AA----T-TTTTTTTTATTAATCT-ATTTTA-ACGT-GCACTGT-----TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAA-AG-TGCGAT-T-AATtaa
gi|9 : ATGTGAACAACATTG-TCACGAATGAGGACC-ATAAAC---CAAAACG-CCCGTGG-----AGCTTTATTAAAAGCAAA-TGCACGGACGCCTGTG----GGGTTGCACCATTAAAGCGGGAAGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCTG----TATT-CA-CCTCGGAGATCACA---GCGGAGCCACTACCAG--ATA-TAGTGATTAGCTCACA---TCCAAC-AGTCTCCAACATCACAGTCCATCAAGATGGGGATAGAGAAAC-TATTACGT----CAGCTCAATCCCCATAAAATTACAGACCCGGACGAGGT-CTCATCAAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTAC
blockSeqs : CGA G A GAA C G TACTC G . . T CA CA GC TGCA AG G AAGA A A G . CT A C CAG C G A G ACAT G G C TA A CTG TCC G A TGGTATC ACC T TACT CA T A CA AT AAA TT T T A TTTA TCCAGT TTAACTTCA A A A C A T C C A AACA T . G C TAT A T C G T T CTTG T AGTG G CATG T CGAGTTTTC C GT T T G T C GG CA T TA GAGA T A CTACCACCAGACTATTTGCTGATGATT TT G C A A A G T GACAAGTACGGGA T . T G AT G C AA G C C TAATT C T T A T AA G C A GAT CGAT AAC A T T TTTG G GAATATGCTTG T T CA CACA AT G C C T CAT A G TTCAA T G ATAAG CTGTAAACATCTAT C AC G G G G A A AC G AA C ACTG A A A A T T A T G A C A G GCC CTG T AGCT T T A TAT CT GTACA C GTTTGGTTGTTTTTTAAATTAAT TTTATTA A C T TACATA A A T C A CAA AACACAA A A AC G ATTA TA TTTAA A A G AA CTGT AC C
blockSeqs : CG . C . C . . T . . . . . . . . A . . . A . . . T . . G . . . C . A GA T . . A A . . A . C . T AC GA GCA GC . A C . TG CT T A A A A G . T G . T . . . . . . . A C C AA A G . ACA T CAAG T CC . . A T C GA CG T TT A T A GACTATTTGCAAGACGACT . . . . . . . . GTA . . C G . . . T . C . . . T A . T AT T C A A . A . . . . . AATTGTGCTT . . CA . G C . . . . . . A . . AA ACATCTAATA . . . . . . . . CC . . C . . . . . T . . . . C . . . GC . . . . . . . . GG C TTGGTTGTTTTTTTTAAATTAAT TTTTTA . . . T . . . . . . . . . T . T . TAAA . . A . . . C
blockSeqs : TA . A . C . . C . . . . . . . . C . . . G . . . C . . C . . . G . T AA A . . T T . . C . T . A CA GA GCA GC . A A . TG TT T A A A G . . C A . C . . . . . . . G T G TT A G . . . . T GA . . A . . . . . TT G T A CTACCACTAGACTATT . . GT . . C A . . . G . C . . . G T . G . . . A . . . . . . . . GAATATGCCT . . CA . G G . . . . . . A . . AA ACATCTAT . . . . . . . . C . . C . . . . . T . . . . C . . . GT . . . . . . . . G C GGGTTTTTTTTTTTTTAAAC . . . . . . . . . . . . . . . . . . T . . . . . . C
blockSeqs : TG . G . C . . T . . . . . . . . A . . . T . . . C . . T . . . A . T AA A . . A T . . C . T . T AC GA GCA GT . A C . TG AT T A A C G . . C G . T . . . . . . . . G G CA A G . . CTATCACCAGACT . . . . . . . A . . . . . T C . . . . . . . . . . AT . . C . A C . . . . . . G . . AA ACATCTAT . . . . . . . . G . . C . . . . . G . . . . C . . . GC . . . . . . . . G T GTTATTTTGCTTTTA . . . . . . . . . . . . . . . . . . A . . . . . . C
blockSeqs : A . A . . . . . . . . . . . . T . . . . . . . C . . T . . . G . T AA A . . G A . . C . T . T AC GA GCA GT . G A . . AT T T G T T . . . G . T . . . . . . . . . . G . G . . . . . . . . . . . . . . T T . . . . . . G . . AA ACATCTA . . . . . . . . G . . A . . . . . T . . . . C . . . GC . . . . . . . . G C GCTTTTTATTTACC . . . . . . . . . . . . . . . . . . C . . . . . . C
blockSeqs : . . . . . . T . . . . . G . T G . . . A A . . C . T . . . GA TT GC . A A . . CT . . G T T . . . . . T . . . T T . . . . . . . . . . TA . . . . . . . . C . . A . . . . . . . . . . . . . . . . . . . . . . . G C TTATTTTTAGCT . . . . . . . . . . . . . . . . . . T . . . . . . G
blockSeqs : . . . . . . . G A . . . . . TT . . . C . . . . . A A A . . . TA . . . . . . C . . . . . . . . . . . . . . . . . . . . . . . . . . A . TATTTTATAAC . . . . . . . . . . . . . . . . . . A . . . . . . C
blockSeqs : . . . A . . . . . . . C . . . . . . . . . . TATTTTT . . . . . . . . . . . . . . . . . . T . . . . . . C
blockSeqs : . . . . . . . . TATTTTT . . . . . . . . . . . . . . . . . . C . . . . . . C
blockSeqs : . . . . . . . . . . . . . . . . . . A . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . C . . . . . . .
blockSeqs : . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . .
blockSeqs : . . . . . . . . .
blockSeqCons : **** *** GA GCA GC TG**** NT******* **** G********* CTATCGCCAGACACT********************** **** AATGTGCTT*** N* ACATCTAT******** C* TGTTATTTTTTTTATTAAC****************** N*****
originalCons : NNNNNATGTGAACAACATCG-TCATGGATGAGGACC-ATAAAC---CAAAACG-CCTGTGG-----AGCTTTATCAAAAGCAAA-CGCACGGACGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCNG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTCCCCAACATCACAGTCCATCAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAAGCTTCATTAGAC----CAAGGCAAGGCCCCAGAC-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCNGTGTC----ACT---G-ACCTNT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACGGCCNTATCATTAGCCA-CT-TGGACAGCCACGGAC----TCCTCACCGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTCGCAAAGAGCCTAGACATAGGGGA-GCAAGTGGACTG-TGTGCTTTTGGACTTCTCC--GAGGCCTTTGATAAAGTCCCACACAACC---G------ACTA-CTGATGAAACTACATCACTACGGCATCAGGGGCCGCACCCATG-CA--ATTGGATCTCGAGTTTCCTTATTGGNCGCACACAGCGTG-TTGTAC-TCGATGGTCAATCGTCGTCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCCGCTGTTCTTCCTGATTTTCATCAACG---ACCTGTCATCATCAGTGTCTT-G-CTACCACCA----GAC--------------T---GTCTGATGTACAGGAGGATCAAGACACC--ACA-GGACCAGGAGGCTTTGCAGAG-CGAC-CTC-AAT-AAACTACAGCAGTGGGAGGACCGATGGCTTATGCAGTTCAACCCGGATAAGTGCGAAGTGCTACGG--G-----TA-----TACCAACCGGAAA-TCCCCA----ATGCTCGCCGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-GAAGTACCTT-GGCTTGACTATT-CA-----TAAGAACCTT-AGCTGGGATACGCAC-ATAGATAANATCACCAAGAAGGCAAACTCCACTCTGGCCTTCCTCGGCAGAAACATCAGC---CGAT----GCCCAA---CCACCATC-AAGGCACAGTGC-T-ACTCCA----CCCTGGT-GCGACCTACCATCG-A-TATGCCT-CCAGCG-TGT-GGAGCCCAGC----CAAGAAN-GAGAACATCAANAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-ATATGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTGT---GTTT--TT-T-----TTTTT---TT-AA----C-TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--TT-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
finalCons : NNNNNATGTGAACAACATCG-TCATGGATGAGGACC-ATAAAC---CAAAACG-CCTGTGG-----AGCTTTATCAAAAGCAAA-CGCACGGACGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCNG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTCCCCAACATCACAGTCCATCAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAAGCTTCATTAGAC----CAAGGCAAGGCCCCAGAC-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCNGTGTC----ACTG----ACCTNT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACGGCCNTATCATTAGCCA-CT-TGGACAGCCACGGAC----TCCTCACCGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTCGCAAAGAGCCTAGACATAGGGGA-GCAAGTGGACTG-TGTGCTTTTGGACTTCTCC--GAGGCCTTTGATAAAGTCCCACACAACCG---------ACTA-CTGATGAAACTACATCACTACGGCATCAGGGGCCGCACCCATG-CA--ATTGGATCTCGAGTTTCCTTATTGGNCGCACACAGCGTG-TTGTAC-TCGATGGTCAATCGTCGTCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCCGCTGTTCTTCCTGATTTTCATCAACG---ACCTGTCATCATCAGTGTCTTCTATCGCCAGACACT----------------------GTCTGATGTACAGGAGGATCAAGACACC--ACA-GGACCAGGAGGCTTTGCAGAG-CGAC-CTC-AAT-AAACTACAGCAGTGGGAGGACCGATGGCTTATGCAGTTCAACCCGGATAAGTGCGAAGTGCTACGG--G-----TA-----TACCAACCGGAAA-TCCCCA----ATGCTCGCCGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-GAAGTACCTT-GGCTTGACTATT-CA-----TAAGAACCTT-AGCTGGGATACGCAC-ATAGATAANATCACCAAGAAGGCAAACTCCACTCTGGCCTTCCTCGGCAGAAACATCAGC---CGAT----GCCCAA---CCACCATC-AAGGCACAGTGC-T-ACTCCA----CCCTGGT-GCGACCTACCATCAATGTGCTT---CCAGCG-TGT-GGAGCCCAGC----CAAGAAN-GAGAACATCAANAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAC-CAA-CGCAC---AAGCAGTGTAACATCTAT--------TGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTTC-CCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTCTGTGTTGTTATTTTTTTTATTAAC------------------TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--TN-----AGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|22 ): ATGGCTTTTACAAAAACAATCCTGTGATTTCCAACTTATTCACACCATTCAAACCTGGACTGGTACTGACAACTCTTCAAAGATGGATGCCATCTTACTCGATATCTCCAAGGCGTTCGACGAG
Unaligned ( gi|23 ): CACAGCTCCATCATTCGATCACAATGATCTATCTGACATGCAGCATGGTTTCCGCAAACAACGATCCTGCGAATCTCAACTCAGTTATCCTCACCATCCACGGCCTGGCGAAAG
Unaligned ( gi|32 ): CAGCGCTTTAACCAGCCCTGGATCACAAGATACCTGAAACGGTTGTATAGGAGAAAGGATCGTGCTTTTAAACGAT
Unaligned ( gi|40 ): CCAGTATAATTAACTTCTGTACATGCAAATTACTGGAACATGTCATATGCA
Alignments
lowQualScore : 111 111 11111 1111 1111 1111 111 111 1111 1111111 1111 1111 111111 222222222 1 1111 1111 111 1111 2222222222 44444 222222222 1 1 1111 11 666666666666 11 1 1 1 1 1 666666666666666 1111 11 22222 111 1111 111 1111 444444444444 1111 111 11111 11111 111111 222 1111 1111111 222222222222222222222222222222222 1111111 111111 222222
lowQualScore : 111 6 1 111 2 6 66666 3 6 7777 0 5 77 77 77 2222 77 1 2222 5 5 0 3 000 99 6 1 111 6 1 6 6 4444 1 5 1 44 3 777 777 9 1 3333333 777 0 1 0000 77 5 5 22 0 11 444 44 5 2 1 0000 999999 000000000 6 6 0 2 1 1 1 5 6 1 2222 1 2222 5 6 111 8 0 6 6 6 1 2 6666 1 0000000000 6 0 0 11111 3 0 888888888 1 55 0 0 0 2 3 2 22 22 3 66 7777 3 5 11 0 99 22 0 555555555555 33 0 3 3 3 3 6 7 000000000000000 0 8 7777 3 3 11 8 8 88 8 3 8 00000 8 1 1 8 1 66 3 2 0 3 888 4444 888 6 6 6 4444 6 0 999999999999 6 6 44 2222 88 1 5 5 5 000 5 5 22222 5 5 22222 444444 5 999 5 77 5 4 4 4 4 4 666 4 66 2 0000 5 5 5 5 3 0 5 0 5 5 5 77 5 5 5 777 888 5 9999 4 4 4 777 55 3333333 0 555 33 999999999999999999999999999999999 8888888 3 3 2 000000 2 2 2 2 2 444 8888888 2 2 55 2 9999 44 000000 3 3 6 44 6666 44 3
lowQualScore : ... . . ... . . ..... . . .... . . .. .. .. .... .. . .... . . . . ... .. . . ... . . . . .... . . . .. . ... ... . . ....... ... . . .... .. . . .. . .. ... .. . . . .... ...... ......... . . . . . . . . . . .... . .... . . ... . . . . . . . .... . .......... . . . ..... . . ......... . .. . . . . . . .. .. . .. .... . . .. . .. .. . ............ .. . . . . . . . ............... . . .... . . .. . . .. . . . ..... . . . . . .. . . . . ... .... ... . . . .... . . ............ . . .. .... .. . . . . ... . . ..... . . ..... ...... . ... . .. . . . . . . ... . .. . .... . . . . . . . . . . . .. . . . ... ... . .... . . . ... .. ....... . ... .. ................................. ....... . . . ...... . . . . . ... ....... . . .. . .... .. ...... . . . .. .... .. .
lowQualScore : 000 7 5 777 5 7 77777 7 7 0000 6 7 99 99 99 1111 99 0 1111 7 7 7 0 000 22 7 0 777 7 5 7 7 2222 4 0 0 44 4 000 000 8 2 0000000 888 8 4 6666 11 7 4 00 7 66 999 88 0 2 0 6666 444444 999999999 5 5 5 0 0 2 4 7 6 7 1111 4 1111 7 7 777 0 8 7 7 4 5 5 5555 8 8888888888 7 8 2 88888 2 2 222222222 2 22 0 8 0 0 2 5 88 88 0 88 8888 2 6 00 8 88 22 8 000000000000 88 0 3 3 3 3 7 3 222222222222222 2 0 0000 2 2 00 0 0 88 0 2 0 00000 0 0 4 0 0 88 0 5 2 2 333 2222 333 7 7 7 2222 7 3 888888888888 7 7 22 1111 77 0 7 7 7 000 7 7 66666 0 0 88888 444444 0 999 0 99 7 4 4 4 4 4 222 4 11 5 6666 0 0 0 0 1 2 0 2 0 0 0 55 0 0 0 888 888 0 4444 4 4 4 000 55 2222222 8 555 55 333333333333333333333333333333333 8888888 1 1 9 333333 7 5 5 5 5 777 1111111 5 5 99 5 6666 22 666666 1 1 2 22 5555 22 5
consensus : NNNNNATGTGAACAACATCG-TCATGGATGAGGACC-ATAAAC---CAAAACG-CCTGTGG-----AGCTTTATCAAAAGCAAA-CGCACGGACGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCNG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTCCCCAACATCACAGTCCATCAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAAGCTTCATTAGAC----CAAGGCAAGGCCCCAGAC-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCNGTGTC----ACT---G-ACCTNT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACGGCCNTATCATTAGCCA-CT-TGGACAGCCACGGAC----TCCTCACCGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTCGCAAAGAGCCTAGACATAGGGGA-GCAAGTGGACTG-TGTGCTTTTGGACTTCTCC--GAGGCCTTTGATAAAGTCCCACACAACC---G------ACTA-CTGATGAAACTACATCACTACGGCATCAGGGGCCGCACCCATG-CA--ATTGGATCTCGAGTTTCCTTATTGGNCGCACACAGCGTG-TTGTAC-TCGATGGTCAATCGTCGTCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCCGCTGTTCTTCCTGATTTTCATCAACG---ACCTGTCATCATCAGTGTCTT--CTA-CCGCCAGACG-----------ATTGTCTGATGTACAGGAGGATCAAGACACC--ACA-GGACCAGGAGGCTTTGCAGAG-CGAC-CTC-AAT-AAACTACAGCAGTGGGAGGACCGATGGCTTATGCAGTTCAACCCGGATAAGTGCGAAGTGCTACGG--G-----TA-----TACCAACCGGAAA-TCCCCA----ATGCTCGCCGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-GAAGTACCTT-GGCTTGACTATT-CA-----TAAGAACCTT-AGCTGGGATACGCAC-ATAGATAANATCACCAAGAAGGCAAACTCCACTCTGGCCTTCCTCGGCAGAAACATCAGC---CGAT----GCCCAA---CCACCATC-AAGGCACAGTGC-T-ACTCCA----CCCTGGT-GCGACCTACCATCGAA-TGTGCCT-CCAGCG-TGT-GGAGCCCAGC----CAAGAAN-GAGAACATCAANAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-AT-TGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTC--TGTGTT-----GTTATTTT--TTTT--ATT-AA----C-TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--T-----NAGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
Reference ( family-301 ) : NNNNNATGTGAACAACATCG-TCATGGATGAGGACC-ATAAAC---CAAAACG-CCTGTGG-----AGCTTTATCAAAAGCAAA-CGCACGGACGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCNG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTCCCCAACATCACAGTCCATCAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAAGCTTCATTAGAC----CAAGGCAAGGCCCCAGAC-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCNGTGTC----ACT---G-ACCTNT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACGGCCNTATCATTAGCCA-CT-TGGACAGCCACGGAC----TCCTCACCGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTCGCAAAGAGCCTAGACATAGGGGA-GCAAGTGGACTG-TGTGCTTTTGGACTTCTCC--GAGGCCTTTGATAAAGTCCCACACAACC---G------ACTA-CTGATGAAACTACATCACTACGGCATCAGGGGCCGCACCCATG-CA--ATTGGATCTCGAGTTTCCTTATTGGNCGCACACAGCGTG-TTGTAC-TCGATGGTCAATCGTCGTCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCCGCTGTTCTTCCTGATTTTCATCAACG---ACCTGTCATCATCAGTGTCTT--CTA-TCGCCAGAC------------ACTGTCTGATGTACAGGAGGATCAAGACACC--ACA-GGACCAGGAGGCTTTGCAGAG-CGAC-CTC-AAT-AAACTACAGCAGTGGGAGGACCGATGGCTTATGCAGTTCAACCCGGATAAGTGCGAAGTGCTACGG--G-----TA-----TACCAACCGGAAA-TCCCCA----ATGCTCGCCGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-GAAGTACCTT-GGCTTGACTATT-CA-----TAAGAACCTT-AGCTGGGATACGCAC-ATAGATAANATCACCAAGAAGGCAAACTCCACTCTGGCCTTCCTCGGCAGAAACATCAGC---CGAT----GCCCAA---CCACCATC-AAGGCACAGTGC-T-ACTCCA----CCCTGGT-GCGACCTACCATC-AA-TGTGCTT-CCAGCG-TGT-GGAGCCCAGC----CAAGAAN-GAGAACATCAANAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-AT-TGCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTC--TGTGTT-----GTTATTTT--TTTT--ATT-AA----C-TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--T-----NAGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
gi|1 : ATGTGAACAACATTA-TCATGGATGAGGACC-A----C---CTAA----CCTGTGG-----AGCTTTATCAAAAGCAAATCGCACGGATGTCTGTGCATGGGACTGCACCATTAAAGAGGGGGGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGGTATCCTTAT--TCA----GCAA--TTTACATCTG----TATT-CA-CCTTGGAGAGCACTACTGCGGAACCACTACCAG--ATA-TGTGAATTAG------------------TTCCCAACATCACAGTTCTTCAAGATGGGG-TAGAGAAAT-CCCCACGT----CAGCTCAAACCCCATAAAGCTACAGGCCCGGACTGGGT-CTCACCAAGATTACT---GAAG---GAA-CATCTCACCCA-------ATAGCTCCAGC---TT-GACACTACTTTTCCAAACTTCATTAGAC----CAAGGCAAGACCCCAGAT-GAAT-GGAAGTTGGCCAACATCACGCCGCTATTCAGGAAGTGAGA---------ACCA-----ACTATCGACCCGTGTC----ACT---G-ACCT---------GTTTACATCAAGGTCATGGAACATATAGTCCACAGCCATATTATTAGTCA-CT-TGGACAGCCATGGAC----CCCTCACCGATAGCCTGTCAGCATGGATTCAGGAA-GCGTCGTACAACTG-AAA---CCCAATTCATCCTGTCAGTTC-ATGACCTCGCAAAGACCCTAGACATAGGGGA-GCGAGTGGACTG-TGTACTTTTGGACTTCTCC--AAGATCTTTGATAAAGTCCCACACAGCC---GGCCCCGACTA-CTGATGAAACTACATCACTACGGCATTAGGAGCCGCACAAATG-----ATTGGATCTCAAATTTCCTTAATGGCTGCACACAGCGTG-TTATGC-TCGATGGTCAATCGTCATCAGCCGCTGCCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGGCCGGCTGGTCTTCCTGATT---GTCTACT---ACC-------ACCAGACTCTT--T-----GCT-GATG-----------ATTGTCTGATGTATAGGAGGATCAAGACGCT--ACA-GGACCAAGAGGCTTTGCAGAG-CGAC-CTC-AAT-AATTTACAGCAGTGGAAGGAGCGATGGCTTATGCAGTTCAACCCGGACAAGTGCGAAGAGCTACGGCCG------A-----TACCAACCGGAAA-TCCCCATGCAATGCTCGCAGAATACAAAATCCACGGCCAAGTCC--TAA-ATA-CAGTTGACTCTGC-AGAGTACCTT-GGTTTGACTATT-CA-----TAAGAACCTT-CGCAGGGATACGCAC-ATAGATAAGATCCCCAAGAAGGCAAACTCCACTCTGGCCTACCTTGGCAGAAACATCAGC---CGAT----GCCCAA---CAACCATC-AAGGCACAGTGC-T-ACGCCA----CCCTGGT-GCGACTAACCATCGAA-TGT--CA-CCAGCG-TGT-GGAGTCTAGC----CAAG----GAGAACATCAATAAACTC-AAG-GCCG-CACAGCGTAGGGCAGCCAG---ATTTGC-CAT-TG----GAGATTAC-CAA-CGCAC---AGGCAGTGTA------AAATGT-A--TGCTAC-AACAA--CTCCAGTGGCAGTCAC-TCCAGCTCTGTCGGGGAAGGGCCCAAG-TC-AT-TA-TGT-TATA-T-AGGATAGTTCAT-CA--GATAGTGGATATCCCAGCGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGAGGACCAGAGGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGGAAGTG-TATA-AGACCT-CCTTCTTCCCCCCAAGCCAT-CCGGCTC-AGGAACAAGTT-ACCAGGAGA-AGCAGT--------AGAC---CCTGG----------AAAACC----TG-CTG-TCC-GGTGCC---GC--CCAGCT-C----TAGACGACTCGATCTGTTTTTTGGTGGTTTT--TTTT--
gi|1 : tcaaggagaaaacatcgtgcttttaaacgatactcaaagaccaactccacacgtgattactcgtgctatagagaccttaaaaatgctgtacatgtgcaatgcaagctcagatatgaggagtTT--TGTGTT-----TTTTTTTTGGTTTT--TTT-AAAATGC-TTTTT-------ATCT-AATTTA-ACGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-GG-TGCGA--T-AATtggggggggggtgtgtgttttttttttgtgttttttttttggtttttttaaaatgctttttatctaatttaacgtgcactgtacatagatgttcaccaccctcacacagggtgcgataat
gi|10 : tcaaggagaaaacatcgtgcttttaaacgatactcaaagaccaactccacacgtgattactcgtgctatagagaccttaaaaatgctgtacatgtgcaatgcaagctcagatatgaggagtatgtgaacaacattatcatggatgaggaccacctaacctgtggagctttatcaaaagcaaatcgcacggatgtctgtgcatgggactgcaccattaaagagggggggtattgcgtacagtgacgccagggtgaaggcaggtatccttattcagcaatttacatctgtattcaccttggagagcactactgcggaaccactaccagatatgtgaattagttcccaacatcacagttcttcaagatggggtagagaaatccccacgtcagctcaaaccccataaagctacaggcccggactgggtctcaccaagattactgaaggaacatctcacccaatagctccagcttgacactacttttccaaacttcattagaccaaggcaagaccccagatgaatggaagttggccaacatcacgccgctattcaggaagtgagaaccaactatcgacccgtgtcactgacctgtttacatcaaggtcatggaacatatagtccacagccatattattagtcacttggacagccatggacccctcaccgatagcctgtcagcatggattcaggaagcgtcgtacaactgaaacccaattcatcctgtcagttcatgacctcgcaaagaccctagacataggggagcgagtggactgtgtacttttggacttctccaagatctttgataaagtcccacacagccggccccgactactgatgaaactacatcactacggcattaggagccgcacaaatgattggatctcaaatttccttaatggctgcacacagcgtgttatgctcgatggtcaatcgtcatcagccgctgccgtttcatcaggagtccctcagggaactgtcctaggccggctggtcttcctgattgtctactaccaccagactctttgctgatgattgtctgatgtataggaggatcaagacgctacaggaccaagaggctttgcagagcgacctcaataatttacagcagtggaaggagcgatggcttatgcagttcaacccggacaagtgcgaagagctacggccgataccaaccggaaatccccatgcaatgctcgcagaatacaaaatccacggccaagtcctaaatacagttgactctgcagagtaccttggtttgactattcataagaaccttcgcagggatacgcacatagataagatccccaagaaggcaaactccactctggcctaccttggcagaaacatcagccgatgcccaacaaccatcaaggcacagtgctacgccaccctggtgcgactaaccatcgaatgtcaccagcgtgtggagtctagccaaggagaacatcaataaactcaaggccgcacagcgtagggcagccagatttgccattggagattaccaacgcacaggcagtgtaaaatgtatgctacaacaactccagtggcagtcactccagctctgtcggggaagggcccaagtcattatgttatataggatagttcatcagatagtggatatcccagcggtgagctacctacaaccagcatcactgaggaccagaggccactccctgcgatttcttgttccacacaccaggacggaagtgtataagacctccttcttccccccaagccatccggctcaggaacaagttaccaggagaagcagtagaccctggaaaacctgctgtccggtgccgcccagctctagacgactcgatctgttttttggtggtttttttttggggggggggtgtgtgtttttttGC----CAAAAAATGAGAATATCAAGAAACTC-GAG-GCCG-TGCAGCGTAGGGCAGCCAG---A-------------------ATTAC-CAA-CGCAC---AAGCAGTGTA------ACATCT-AT--GCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TACCTA-CAA-CAAGCA-TCACTGCGGAACAGTAGC-CACTCCCTGCGATTT-CTTGTTCCACACACCAGGACGGAAGTG-TACA-AGACCT-CCTTCTT-ACCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGACTC--TG---T-----GTTATTTT--T-----------------TTTTT-------ATCT-ATTTTA-ACGT-GCACTG------TA-GATAG-ATGTT-CA-C-TACCCT---CA-------CACAG-AG-TGTGA--T-AATAC----T--TTTTAAAAGTGGT-AA-T-GCACT--A----A--ACCGGGAGAAGA
gi|11 : TTTTTGACTTTTCA--AAGGCCTTTAACAAGGTCCCACACATTC---G------ACTG-CTGATAAAGCTACATCATTATGACATCCGAGGACGCATCCATGACA--A---GATAACAAG-----TTACAGGGTGTACAGAACGTGTTTGTCCTTTGATAGTCAATCATTGCCCGCTACCATCATTTCATCCAGAG----TCAGGAAAACAT-TTA----------TCTTCTTGATGTACATAAATGAGAAATTGTC-TCATCAACCACTCGACTATTTGCAAGACG-----------ACTGTCTTATGCACAGAAGGACCAGGTCATCTTATA-GG
gi|11 : aAG-TCCCCA----CTACTTGTTGGCTAGCTTATCCATGGCCATGTAC--TTT-TTA-TGATCAACTGTGT-TAAATACCTC-CACTTCACCTTT-CA-----CAGGAGCATC-GGCTGAGATATGAAC-ATAGACGATATCACCAAGAAGGCAAACGCCACTTTgataactcaaaaagctccaacagtgattaatggagaatcaagtgcacaaaagagtccccactacttgttggctagcttatccatggccatgtactttttatgatcaactgtgttaaatacctccacttcacctttcacaggagcatcggctgagatatgaacatagacgatatcaccaagaaggcaaacgccacttt
gi|12 : atttttgacttttcaaaggcctttaacaaggtcccacacattcgactgctgataaagctacatcattatgacatccgaggacgcatccatgacaagataacaagttacagggtgtacagaacgtgtttgtcctttgatagtcaatcattgcccgctaccatcatttcatccagagtcaggaaaacatttatcttcttgatgtacataaatgagaaattgtctcatcaaccactcgactatttgcaagacgactgtcttatgcacagaaggaccaggtcatcttatagggataactcaaaaagctccaacagtgattaatggagaatcaagtgcacaaaagAGGTCCTGACGAACTGCTCACCG-GCTTACTCTGAAAA---GAA--ATTAC--CAATGGTATCACAACCGCA-C---TT--ACACTTGTCTTCTAAGCTGCAATACAC----CAAGA-AAGAACCCCTAC-AAATTGGAATACAGCTACAATAACACCAATCTTCAAGAAGGGAGACAATAGCAAACCATTTA-ACTATCTTCCAGTGTTTTTAACTCCAGTATCTTTAACTTCAGTATGCTGCAAAGTACTGGAACATGTTATACACAGCTCCATCATGAGGTT-CTCTAACCAG-CACAATA----TTATATCTGACATGC----AGCATAGATTCTGCAA-ACAACGATC--CTGCAAATATCTCATCTTATCCTCACCATCCAATG-CCTGGCGAAAGGGATAGACA-ACAAAATCCAAATTGA-TGCTGTGCTCCTCGAATTTTCT--TAGGCGTTTGACAAAGTACCATAC--CCAGTG------GCTAGCTAA-AAAAC-ACAACAC
gi|13 : ATGTGAACAACATCGATCAATGATGGAGACCGATGAACGAACAAAA-G-CTTTTAATACTCAGCTTT---AATAGCAGA-TGaatg
gi|13 : tttgaagaccaactccacaacgtgattaactcgtgttataaagacctaaaaatgctgttaacaaatgtgcagatactggtcagtagtGGGTACTGTCTACAGTTGACCAGCCAAGATGA-GGCCAAGATATTCTTAAGCCCA----GCAAAGTTTACATCGAAAGATATTACAACCTC-------ACT---GCGGTACCACTACCAGCTATAATGGAAATTAGCCCACACAGTCCAACCAGTCCCCATCAGCACAATCCATCAAAAATGGG-TAGAGAATCGTCCTACATACATCAGCTCAGCCCCCATAAAGCTACAGGCCCG---------------------------AAAG---AAAGCGTCACACCAG-------ATAGCTCCAGggtactgtctacagttgaccagccaagatgaggccaagatattcttaagcccagcaaagtttacatcgaaagatattacaacctcactgcggtaccactaccagctataatggaaattagcccacacagtccaaccagtccccatcagcacaatccatcaaaaatgggtagagaatcgtcctacatacatcagctcagcccccataaagctacaggcccgaaagaaagcgtcacaccagatagctccagnnnnnnnnnnnnnnnnnnnnnnnnnctactgtctacagcgacgccaagatgaa
gi|14 : tttgaagaccaactccacaacgtgattaactcgtgttataaagacctaaaaatgctgttaacaaatgtgcagatactggtcagtagtatgtgaacaacatcgatcaatgatggagaccgatgaacgaacaaaagcttttaatactcagctttaatagcagatAGATTAC-TAA-CGCAC---AAGTAGTGTA------ACATCT-AT--GCTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-G-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGTGGTGAGC----TACCTA-CAA-CCAGCA-TCACTGCGGGCCAGAGGC-CACTCCCTGCAATTT-CTTGTTCCACACACCAGGACGGAAGTG-TACA-AAATCT-CCTTCCT-CCCCAAAGCCAT-CCGGCCC-TGGAACAAATT-ACCAGGGGG-TGCAGTGGAGGGCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCC-GGTGCC---GC--CCAGCT-GTACATAGACGACTC--TG---T-----GTTATTTT--T-----------------TTTTT-------ATCT-ATTTTA-ACTT-GCACTG------TA-CATAG-ATGTT-CA-C-TACCCT---CA-------CACAG-AG-TGTGA--T-AATAC----TTAT-----TAGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGAnnnnnnnnnnnnnnnnnnnnnnnnnctactgtctacagcgacgccaagatgaa
gi|15 : AAGGACCCAAGGTC-ATGTAATGCATATAAC-AGGATAGTTTATGCA--GATAGTGAACATCC-GG-GGTGAGC----TACCTAACAA-CCAGCAATCACTGCGAACCAGAGGCACACTCCCTGCGTTTTTCTTGTTCCACACACCAGGACGACAGTG-TACATAGACCTGCCTTCTT--CCCCAAGCCATCCCGGCTC-TGGAACAAGTTGACCAGGGGGCCGCAGTGGAGGCCAAGACCTGCTTGGATCAGCTTTAAGAACC----AG--TGTTCC-GGTGCCTATGCCTCCAGTTGG----TAGAAAAC---------T-----GTTATTT----------TT-AG----CTTTTTT-------ATCTAATTTTACACGT-GCAC-G------CA-CATAG-ATGTT-CACC-CAACCTCAACA-------CACAGAAA-TGCGA--TGAATACATTAT--T-----AAGT-GT-AA-TGGCACTAAA----A--ACCGGAAGAAGa
gi|16 : T---GAGG---GAAATATCTCACCAA-------ATAGCCTTAGC---TTTGACACTACTTTTCAAAGCTTCATTAGAC----CAATGCAAGGCCCCAGAT-GAAT-GGAAGTCGGCCAACATCACGCCGCTATTCAAGAAGGGAGACCGAAGTGCACCAGCCA-ACTATCGACCCGTGTC----ACT---G-ACCTCT-------GTTTGCAGCAAGGTCATGGAACATATTGTCCACAGCCATATCATTAGTCA-CT-TGGACAGCCATGGAC----TCCTCACTGATAGCC----AGCATGGATTCAGGAAGGCATTGCTCAACTG-AAA---CCCAACTCATCCTGTCATTTC-ATGACTTCACACTGAGCCTAGATATAGGGGA-GCAAGTGGACTG-
gi|17 : CTGAACTCACACAAAGTCAGCGGACCGGACCAGAT-ATCCACTATGTTTCT---GAAGTCCATATCATCTGTCC----------TAGCTCCAGCACCTCT--CATCATCTTTC-AAACATCACTCGAT----GAAGACCAAGTTCCTGAT-GACT-GGAAA---------------CCATTATTCAAGAAAGGCGACC--AGAGCACC---TA-ACTACAAACCAGTG--------------A------------GTTTAATGCAAGGTTGTCGAACATATCATCCACAGCCAAGTTATCAACCATCT-TG---AG--ACGAACAACATCCTCATCAATGATC----AGGATGGTTTTCGAAA-ACGTCG
gi|18 : cTTAAGAACC----AG-CTG-TCC-GGTGCC---GT--CCGGCT-G----TA-ACGACTA--TGTGTT-----ATT-TTGC--TTTT--AT---------------------------ATTTTA-ACGTTGCACTG------TA-CATAGAATGTT-C--C-CACCCT---CA-------CACAG-AG-TGCGA--T-AATAC----T--TTTTA-AAGTGGT-AA-T-GCA----A----A--A---GAAGAAGA
gi|19 : TTG-CACTTCTCTTTCAAGCCTCAATACAC----CAAGACA-GGACCTAAACAGACT-GGAACACAACCACAATAACACCGATCCTCAAGAAGGAAGACaga
gi|2 : cccgcttactcaagggatgaccagtgaaattacacATGTGAAACACAT-A-TCATGGATGAGGACC-ATAACC---CAAAACG-CCTGTGG-----AGCTTTATGAAAACCAAA-CGCACGGACATCAGTT----TGTTTGCATCATTAAAGCGGGAGGGTATTGCGTACAGT-GAC--GCCAGGGTAAAGGC--AGATATCCTTAA--CCATGCAGCAA--TTTACATCAG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--A-A-TGGGAATTAGTCATTA---TCCAAC-AGTCCCCATCAGCACAATCCATAAAGATGAGG-TTGAGAAAT-TCCTACGT----CAGCTCAACACTCATAAAGCTACAGGCCCGGACGAGGT-CTCATCGAGATTACT---GAAG---GAAATACCACACCAA-------ATAGCTCCAGC---TTTGACACTACTTTTCCAGGCTTCATTAGAC----CAAGGCAAGGCCCCAGAT-GAAA-TGTAGTCGGCCAACATCACGCCACTATTCAAGAAGGGAGACCGAAGTGCACCAGCCA-ACTATCGACCCGTGTC----ACT---G-ACCTTT-------GTTTGCAGCAAGGTCATGGAACATATAGTCCACAGCTCTGTCATTAGCCA-CT-TGGACAGTCATGGAC----TCCTCACTGATAGCC----AACATGGATTCAGGAA-GCGTCGCCCAACTG-AAA---CCCAACTCATCCTGTCAGTTC-ATGACCTTGTAAAGCGCCTAGACATGGGGGA-ACAAGTGGACTG-TGTACTTTTGGACTTCTCCTTGAGGCCTTCGATAAAGCCCTACACAACC---G------ACTA-CTGATGAAACTACATCACTACGGCACCAGGGGCCGCACCCATG-CATGATTGGATCTCGAGTTTTCTTATTGGCCACACACAGCGTG-TTGTAC-TCGATGGTCAATCATCATCAGCTACTACCGTTTCATCAGAAGTCCCGCAGGGAACTATCCTAGGCCCACTGTTCTTTCTAATTTTCATCAACA---ACCTGTCATCATCAGTGTCTT--CTA-TCACCAG--------------ACTGTCTGGTGAACAGGAGGATCAAGACACC--ACA-GGACCAGGAGACTTTGCAGAG-CGAC-CTC-AAT-AAACTACAGCAGTGGGAGGACCGATGGCTTATACAGTTCAACCCGGATAAGTGTGAAGTGCCAGGA--G-----T------CATCAACTGGAAA-TTCCCA----GTGCTCGCCGAATACAAAATCCACGATCAAGTCC--TAA-ATA-CATTTGACTCTGC-GAAGTACCTT-GG-TTGACTATT-CA-----TAAGAACCTT-AGCTGGGATAAGCAC-ATAGATAATATCACCAAGAAGGCA----CCG---TGGCCTTCCTCGGCAGAAA--------------------CCAA---CCACAATC-AAGGCAAAGTGC-T-TCTCTA----CCCTGGT-GCGACCTAACATC-AATTGTGCTT-CCAGTG-TGT-GGAGCCCAGC----CAAGAGG-GAGAACATTAACAAACTC-GAG-GCCG-TACAGCGTAGGGCAGCCAG---ATTCGC-CAT-TGTTCAAAGGTTAC-CAA-AGTAC---AAGCAGTGTA------ACATCTAATATACTAC-GGCAA--CTCCAGTGACAGTCAC-TCCAACACCGTCGGGAAAGGACCCGAG-TC-AT-GA-TGC-TATA-G-AGGATAGTTTAT-CA--GAAAGTGGA-----CGGCGGTGAGCACTGTATCTA-C-A-CCTGCA-TCACTGCGGACCAGAGGC-CACGCCCTGCGATTT-CTTGTTCCACACACCAGGACGACAGCG-TACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGACTT-TGGAACAAGTT-ACCAGGGGG-CGCAGTGGAGTTCAAGAC---CCTGGA-CAGCTTTAAGAACC----AA-TTG-TCC-GGTGCC---GC--CCAGCT-G----TAGACGATTC--TGTGTG-----GGTTTTTT--TTTT--TTTAAA----C-TTTTT-------ATCT-ATTCTA-ACGT-GCATTG------TA-CATAA-ATGTT-CA-CACCCCCT---CC-------CACAG-AG-TGCGA--T-AATAC----T--T-----CAGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGAaaca
gi|20 : agtaaT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTACT
gi|20 : CCAGCT-TTGACA-CTACT-AC----GCCTCACTGATAGCC----AGCATGGATTCAGGAA-GCGTCGCTCAACTG-AAA---CCCAACTCacgcctcactgatagccagcatggattcaggaagcgtcgctcaactgaaacccaactctaatagatctatcagcgagtgatttgtcaa
gi|21 : tgaaggaagcatcacaccaaatagctTGCC---GC--CCGGAT-G----TAGACGACTC--TGT-----------AGGCT--TTTT--ATTTAC----C-TTTTT-------ATCT-GTTTTA-ACAT-GCACTG------TA-CATAG-CTGTT-CA-C-CAACCT---CA-------CAAAG-AG-TGT----T-AATA--------------TAG-----AA-T-GCGCT--A----A--A-CGGAAGtaatagatctatcagcgagtgatttgtcaa
gi|24 : TATATT--ATTT---TT-AG----C-TTTTT-------ATCT-ACTTTA-AAGT-GCACTG------TA-CATAG-ATGTT-CA-C-CACC-T---CA-------AAAAG-AG-TGCGA--T-AATAC----T--T-----AAGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAG
gi|25 : TGTAAAGTGCTACGG--GACAAGTACGGGATACCAATTGGAAA-TCTCCA----ATGGTCGCCAAATACAAAATCCACAGCCAAGTCC--GAAGGCC-CAGTTGACTTTGC-AAA
gi|26 : t-TTTTT-------ATCT-ATTTTA-ACTT-ACACTG------TA-CATAG-ATGTT-AA-A-TACCCT---CA-------CACAG-AA-TGCGA--T-AATACT---T--T-----TAGTGGT-AA-T-GCACT--A----A--ACCGGAAGAAGA
gi|27 : gttaACTG------TA-C-TAG-ATGTTTCA-C-C-CCCA---CAAACACAACACAG-AGATGCGAACT-AGAAC----T--T-----CAGTGGT-AAATAGCACT--A----A--AGCGGAAGAAGA
gi|28 : GAGACCGAAGTTT-CTAGTTATCCTACTG-CCAGTGTC----AC------ACCCAT-------GT--GCAGTAAGGTCAAGGAAC--ATAGTCCCTGGTCTTTTCATTg
gi|29 : GAGACCGAAGTTT-CTAGTTA-TCTACCTGCCAGTGTC----AC------ACCCAT-------GT--GCAGTAAGGTCAAGGAAC--ATAGTCCCTGGTCTTTTCATT
gi|3 : ATGTGAACAACATCG-TCATGAATGAGGACC-ATGGAC---CAAAACGGTCTGTGG-----AGCTTTATTAAAAGCAAA-CAAACAGATGCCTGTG----GGGCTGCTCCGTTAAAGAGGGAGGGCATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCC----ACAA--TTTACATCCG----TATT-CA-CCTCGGAGAATACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTTCCCAACACCACAGTCGATCAAGATGGCG-TAGAGAAAC-CCCTACGT----CAGCTCAACCCCCATAAAGCTACAAGTCCGAACAAGGT-CTAATCAAGATTACT---GACG---GAAACATCACAACAA-------ATAGCACCAGC---TTTGACACTACTTTTTCAAGCTTCATTAGACTACTTAAGGCAAGACCCCAGAT-GAAC-GGAAGTCGGCCAACATCATGCCACTATGCAAGAAGGGAGACCGAAGTGCACCAGCTA-ACTATCGACCCGTGTA----ACT---G-ACCTCT-------GTTTGCAACAAGGTCATGGAACTTATAGTCCACAGCCATACCATTAGCCA-CT-TGGACAGCCATGGAC----TCCTAACTGATAGTC----AGCATGGGTTCAAGAA-GGGTCTCTCAACTG-AAT---CCCAATTCATCCTGTCAGTTC-ATGATCTCGCAAGGGGCCTAGACATAAGGGA-GCAAGTGAACTG-TGT--------ACTTC--------------GGTAATGTCCCACACAACC---G------ACTA-CTAATGA
gi|30 : cgaagatgacataatagcgttttaaccagctctagatcacaaagaccttcaaagattgtctaggagaaaggatcacgctttttaaaaaaatacccgaagaccaactccacacgttattaatcgtgctataaagaccttgaatactgtacatgtgcaatgcaaactcagatacgaggaat-GCAGTG------TAACATCT-ATGCT--A-C-CACCCT---CA-------CACAA-AG-TGCGA--T-AATAC----T--TTAA--AAGTGGT-AA-T-GCATT--A----A--ACCGGAAGA
gi|31 : TACAGC-GAC--GCCAAGATGAAGGC--AGATATCCTTAA--CCA----GGAA--TTTACATCAG----TATT-CA-CCT-------CACT---GCGGTACCtg
gi|33 : tgtcG-ATGTC-CA-C-CACCCT---CA-------CACAG-AG-TGTGA--T-AATAC----T--T-----AAATGAT-AA-T-GCACT--ACTGTAACACCGGAAGAAGA
gi|34 : ATAG-ATGTT-CA-C-CACCCT---CA-------CACAG-AA-TGCAA--T-AATAC----T--T-----TAAAAGTAAA-T-GCACT--A----A--ACCAGAAGAAGag
gi|35 : TCCGTCGAGGAAGGGCCCAAG-TT-AT-TA-TGC-TGTA-C-AGGATAGTTTAT-CA--GATAGTGGACATC
gi|36 : TGC-GAAGTACCTT-GGCTTGACTATT-CATAATTTAAGAACCTT-AGCGGGGATATGCAC-AT
gi|37 : ATCTTCAGTGTCTT--CTA-CCACTAGACT-----------ATTGTCTGATGTACAGGAGGATCAAGACAC
gi|38 : ----TAGACGACTC--TGTGTT-----ATT---------TT--AT--AA----C-TTTTT-------ATCT-ATTTTA-ACAT-GCACTG------TA-CAT
gi|39 : -------CAAAG-AG-TGCAA--T-AATGC----T--T-----CAGTGGT-GA-T-GCA----A----A--A---GAAAAAGA
gi|4 : AAGAGCCTAGACATAGGGGA-GCAGGTAGACTA-TGTGCTTGTGGATTTCTCC--AAGGCCTTTGATAAAGTCCCACACAACC---G------ACTA-CTTATGAAACTGCATCACTACGGCATCAGGGGCCGCACTCATG-----ATTATATCT-----------ATTGGGAGCACACAACGTG-TTGTAC-TCGATGGTCAGTAGTCATCAGCCACTACCGTTTCATCAGGAGTCCCTCAGGGAACTGTCCTAGACCCGCTGTTCTTCCTAATTTTCATCAATG---ACCTGTCATCATCAGTGTCTT--CTA-CCACCAGACTATTTGCTGATGATTATCTGATGTACAGGAGGATCAAGAAAAC--ACAGGGAACAGGAGGCTTTGCAGAGCCGACAATCAAATAAAACTACAGCA--GGGAGGACCGA-GGCTTATGCAGTTCAACCGCGATAAATGCGAAGTGCTACGG--G-----TA-----TACCAAGCGGAAATTCCCCA----ATGCCCG-CGAATACAAAATCCAC-GCAAAGTCCATTAA-ACACCAGTTGACTCTGCAAAAGTACCTTGGGCTTGACTATTCCA-----TAAGAACCTTCAGCTGGGATACGCACAATAGATACGATCACCAGCAAGGCAATCTCCACTCTCGGCTTCCTCGGCAGAAACATCAGCA--AGAT----GCCCAAAACCCACCATCAAAGGCACAGTGCTT-ACTTCATTTGCTTTGGTGGCGACCCACC-TCGAA-TATGCTTGCCAGCGTTGT-TGAGCCCAGCCACACAAAAAG-GAGAATATTAAGAAACTC-GAGCGCAGTTGCAGCGTAGGGCAGCCAGCATGTTTGCACTTGTG----AAAATTACTCAAGCGCACATAAGGCAGTGTA------ACATCT-A--TGCTAC-tgacgaag
gi|5 : CCTCGACAGAAACATCAGC---CAAT----GCCCAA---CCACCATC-GAGGCACTGTGC-T-ATTCCA----CGCTAGT-GCGACCCACCATTGAA-TATGCCT-CCAGCG-TGT-GGAGCCC-GA----CAAGAAA-GAGAACATCAACAAACTC-GAG-GCCA-TACAGCGTAGGGCAGTTAG---ATTCGC-CAT-CG----AAGATTAT-CAA-AGTAC---AAGCAGTGTACTGTAAACATCT-AT---CTAC-AGCAA--CTCCAGTGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGCCCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTTAT-CA--GATAGTGGACATCCCGGCGGTGAGC----TAC-TA-CAG-CAAGCA-TCACTGCGGATCAGAGGC-CACTCCCTGCGATTT-CTTAACCCACACACCAGGACGACGGTG-TACA-AGGACC-CCTTC----CCCCAAG--GT-C--------AGAACAAGTT-ACCAGGGGG-CGCAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACCAGCTAG-CTG-TCC-GGTGCC---GC--CCAGC
gi|5 : --TTTT--A---AA----C-TT----------ATCT-ACTTTA-ACGT-GCACCG------TA-CATAG-ATGTT-TA-C-Ccttttggttttaagaaaaaaaaaaaaaaaccggaccttccctgtaaaatgttttaaacttatctactttaacgtgcaccgtacatagatgtttacc
gi|6 : cctcgacagaaacatcagccaatgcccaaccaccatcgaggcactgtgctattccacgctagtgcgacccaccattgaatatgcctccagcgtgtggagcccgacaagaaagagaacatcaacaaactcgaggccatacagcgtagggcagttagattcgccatcgaagattatcaaagtacaagcagtgtactgtaaacatctatctacagcaactccagtggcagtcactccagctccgtcgggaaagggcccaagtcattatgctatacaggatagtttatcagatagtggacatcccggcggtgagctactacagcaagcatcactgcggatcagaggccactccctgcgatttcttaacccacacaccaggacgacggtgtacaaggaccccttcccccaaggtcagaacaagttaccagggggcgcagtggaggccaagaccctggacagctttaagaaccagctagctgtccggtgccgcccagccttttggttttaagaaaaaaaaaaaaaaaccggaccttccctgtaaaatgATGTGAACAACATTA-TCATGGATGAGGATC-ATAAGC---CAAAACG-CTTGTGG-----AGCTTTATCAAAAGCAAG-CGCACGGATGCCTGTG----GGGTTGCACCATTAAAGAGGGAGGGTATTACGTACATT-GAC--GCCAGGGTGAAGGC--AGATAGCCGTAA--TCG----GCAA--TTTACATCTG----TATT-CA-CCTCGGAGAGCACT---GCGGAACCACTACCAG--ATA-TGGGAATTAGCCCACA---TCCAAC-AGTTCCCAACATCACAGTCCATAAAGATGGGG-TAGAGAAAC-TCCTACGT----CAGCTCAACCCCCATAAATCTACAGGCCCGGACGAGGT-CTCGTCAAAACT-CT-------------------CATGAA-------ATAGCTCCAGC---TTTGACAATACTTTTTCAAGCTTCATTAGAC----CAAGACAAGGCCCCAG
gi|7 : gaaaatgacatcacagcgctttaaccagccctggatcacaagagacctgaaacagttgtctaggagaaaggatcgtgcttttaaacgatactccaagaccaactccacacgtgattactcgtgctataaagaccttaaaaatgctgtacatgtgcaatgcaaactcagatatgaggagtGGCAGAAACATCAGC---CGATCGATGCCCAA---CCACCATC-AAGGCACAGTGC-T-ACTCCA----CCCTGAT-GCGACCTACCATT-------------CAGCA-TGT-AGAGCCCAGC----CAAGAAT--AGAACATCAATAAACTC-GAG-GCCG-TATTGTGTAGGGCAGCCAG---ATTCGC-CAT-TG----GAGATTAA-CAA-CGCAC------------------------T-AT--GCTAC-AGCAA--CTCCAATGGCAGTCAC-TCCAGCTCCGTCGGGAAAGGGACCAAG-TC-AT-TA-TGC-TATA-C-AGGATAGTTAAT-CA--GATAGTGGACATCCAGGCGGTGAGC----TACCTT-CAA-CCAGCT-TCACTGTGGACCAGAGAC-CAC-----------------------ACACCAGGACGACAGCG-AACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTC-TGGAACAAGTT-ACCAGAA----GTAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AG-CTG-TCA-GGTGCC---AC--CCAAC-------TAG---------TGTGTTTG---GTTGTTTT--TTAA--ATT-AA----T-TTTTTTTTTTA-ATCT-ATTTTA-ACGT-GCACTGTACATATA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAA-AG-TGCGA--T-
gi|8 : tgAGCATC-GCGATCGAT----GCCCAAA--CCACCA-C-AAGGCACAGTGC-TTACTCCA----CCCTGAT-GCGACCTACCA----A-T-------TCAGCA-TGTTAGAGCC--AT----CAAGAAT-ATGAACATCAATAAACTCCGAG-GCCG-TACTGTGTAGGGCAGCCA----ATTCCC-CAT-TG----GAGATTAC--AA-CGCAC------------------------T-AT--GCTACCAGCAAACTTCCAAGGGCAGTCACGTCCAGCTCCGTCGG-AAAGGGACCAA--TCGAT-TA-TGC-TATA-CCAGAATAATTAAT-CAAAGATAGTGGACATCCAGGCGGTGAG-----TACCTG-CAAACCAGCT-TCACT-TGGACCA-AGAC-C----------------------CACACACCAGGACGACAGCGACACA-AGACCT-CCTTCTT-CCCCCAAGCCAT-CCGGCTCATGGAACAAGTT-ACCAGAAG----TAGTGGAGGCCAAGAC---CCTGGA-CAGCTTTAAGAACC----AGTCTG-TTCAGGTGCC---AC--CCAAC-------TAG---------TGTGTTTG---GTTGTTTT--TTTTAAATT-AA----T-TTTTTTTTATTAATCT-ATTTTA-ACGT-GCACTGT-----TA-CATAG-ATGTT-CA-C-CACCCT---CA-------CACAA-AG-TGCGAT-T-AATtaa
gi|9 : ATGTGAACAACATTG-TCACGAATGAGGACC-ATAAAC---CAAAACG-CCCGTGG-----AGCTTTATTAAAAGCAAA-TGCACGGACGCCTGTG----GGGTTGCACCATTAAAGCGGGAAGGTATTGCGTACAGT-GAC--GCCAGGGTGAAGGC--AGATATCCTTAA--CCA----GCAA--TTTACATCTG----TATT-CA-CCTCGGAGATCACA---GCGGAGCCACTACCAG--ATA-TAGTGATTAGCTCACA---TCCAAC-AGTCTCCAACATCACAGTCCATCAAGATGGGGATAGAGAAAC-TATTACGT----CAGCTCAATCCCCATAAAATTACAGACCCGGACGAGGT-CTCATCAAGATTACT---GAAG---GAAGCATCACACCAA-------ATAGCTCCAGC---TTTGACACTAC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|22 ): ATGGCTTTTACAAAAACAATCCTGTGATTTCCAACTTATTCACACCATTCAAACCTGGACTGGTACTGACAACTCTTCAAAGATGGATGCCATCTTACTCGATATCTCCAAGGCGTTCGACGAG
Unaligned ( gi|23 ): CACAGCTCCATCATTCGATCACAATGATCTATCTGACATGCAGCATGGTTTCCGCAAACAACGATCCTGCGAATCTCAACTCAGTTATCCTCACCATCCACGGCCTGGCGAAAG
Unaligned ( gi|32 ): CAGCGCTTTAACCAGCCCTGGATCACAAGATACCTGAAACGGTTGTATAGGAGAAAGGATCGTGCTTTTAAACGAT
Unaligned ( gi|40 ): CCAGTATAATTAACTTCTGTACATGCAAATTACTGGAACATGTCATATGCA