lowQualScore : 1111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1111111111111111111 1111111111111111111111111111111111111111111111111111111111111
lowQualScore : 5555555 1 1111111111111111111111111111111111 55 99999999999999999 1 22 1 4 2 77777777777777777777777 1 22 222222 44444444444444 11 1 555555555555555555555555555555555555555555555555555555555555555555555555555 222222 222222 444444444444444 1 44 1 111111 1 2222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 4444444444444444444 222222 4444444444444 222 1 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 111 444 22222222222 1111 6666666666666666666666666666666 1 33333 2222222 2222222 22222222222222222222 5555555555555555 1 11 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 444444 1 222 1 88888888 4 0000000000000000000 2 2 22 33 22222222222 1 2222 2 1 33333333 1 333 11 1 11 1 3333333333333333333333333333333333333333333333333333333333333 1 222 2 6666 2 1 1 2222 2 1 22222 4 1 2 44 22 2 2 2
lowQualScore : 6 6 7777777 6 6 5 4444444444444444444444444444444444 55 99999999999999999 5 11 5 6 0 7 3 99999999999999999999999 7 8 00 2 8 999999 6 00000000000000 6 55 5 0 0 555555555555555555555555555555555555555555555555555555555555555555555555555 333333 8 8 000000 444444444444444 0 6 6 22 0 666666 4 3 1111 1 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 5555555555555555555 3 5 1 1 77 555555 5 4 9999999999999 555 5 2 5 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 77 111 88 9 444 5 5 5 5 5 5 22222222222 5 9 4 4 99 7777 8 0000000000000000000000000000000 8 1 5 55555 5555555 99 2 6 3 9999999 3 3 99999999999999999999 8 1111111111111111 0 5 5 99 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 000000 7 888 5 00000000 0 0000000000000000000 0 0 77 2 11 7 99999999999 8 3 4444 3 3 66666666 3 111 33 0 88 5 7 2222222222222222222222222222222222222222222222222222222222222 3 222 6 1111 6 6 3 3 7777 0 5 44444 0 5 0 77 77 0 8 8 4
lowQualScore : . . ....... . . . .................................. .. ................. . .. . . . . . ....................... . . .. . . ...... . .............. . .. . . . ........................................................................... ...... . . ...... ............... . . . .. . ...... . . .... . ................................................................................................................................................................................................................................................................................ ................... . . . . .. ...... . . ............. ... . . . .................................................................................................................................................................................................................................................................................................................................................................................... . .. ... .. . ... . . . . . . ........... . . . . .. .... . ............................... . . . ..... ....... .. . . . ....... . . .................... . ................ . . . .. ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ...... . ... . ........ . ................... . . .. . .. . ........... . . .... . . ........ . ... .. . .. . . ............................................................. . ... . .... . . . . .... . . ..... . . . .. .. . . . .
lowQualScore : 0 0 0000000 0 0 0 0000000000000000000000000000000000 00 00000000000000000 0 00 0 0 0 5 0 55555555555555555555555 0 0 44 2 0 222222 6 44444444444444 0 88 0 2 0 222222222222222222222222222222222222222222222222222222222222222222222222222 222222 0 0 999999 222222222222222 0 4 2 55 3 888888 7 7 0000 9 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 4444444444444444444 9 7 7 4 99 000000 7 9 7777777777777 000 7 4 1 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 4 11 666 77 9 333 9 7 7 7 7 7 77777777777 2 3 0 0 44 0000 0 5555555555555555555555555555555 0 4 4 44444 2222222 22 2 7 7 2222222 0 8 44444444444444444444 0 7777777777777777 0 2 0 00 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 000000 3 000 5 55555555 0 0000000000000000000 0 0 55 5 77 3 00000000000 3 3 3333 7 3 77777777 3 777 88 0 88 3 3 7777777777777777777777777777777777777777777777777777777777777 3 777 7 0000 7 7 3 3 5555 0 0 00000 0 0 0 55 55 0 5 5 0
consensus : NNNNNNAGATGGGTGGAGGAGAGCGAGAAATCCACTAAATATTTCTGTAACCTAGAATCTAGAAACACTCCTTAA--AAACAATCAAAAAAGGGTTAAAACTATCGAAAAGGTAATG-ATTGATACTCATTCGGA-CATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGAAACGTGAAATNTGTGTACA-GCGTTNNAAGGATA-GAAAAATAACAAA-TCTACCGGG-AAGT----GATGGTT-T-CA--CAGTC--GAATTT-TTCAAGTTT-TTTT---GGAANGANATCTG-------A--AGA---AA-----T--A---TGT---NA--AAGC-GNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCNATN--TCACAAAGAC-T--GGANTTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGACA----A-TTTTTNAAAAA-CTTGGCGTCC-------A-NT--NT---CT--T-TT--A---AAT-----------G-TGCTTGTANA-AAC--T-TATATCGGG--TTGTCT---T--TTAA-CTACA-GAATNAAAATCTACTTCTN-G--ATTATTT-AATATCNG-ATAC-TCAAN--CT--GG-TTTNT---GAAGGN----N-AATG---CATA-----GGAGA-NA-A--CACTAGATTTATNTATGATCTCGATGT----C-T--TT---CACTGAAATGGACTAAT-ATA---TCCAGGAT-TACTN-GTACTC-ATAGATT-TTGAGAAGGCCTTCGA--CT----C-A-TGTCAT-GGT-CG----TTCATTCTATAAA-GTTCTTAA--ACTATTT-TGGNTTTGG---G---CGG---AT--ATTATA-ATTANA--T-GGAT-NAAGATTT-TAAATA--CAAA---C-N-C-AG-AG---CTTCNG-TT-TTACA-AA----GCG-GNTTCC-TNTCAGAA-----CAGNTCG-AC-AT-ACAAGAGAG-GT---TG--GCAGACAA-GG-GG-GACCCTG-T--T--G-CGA-CCATAT-------TT----ATTT--TNCT------TGC-C---GAAAT---TCTGG--CTACT-CT--T-GAT---CAAAGCA-AA----ACAA----GA-------GATAT------TA-NGG--A-TAATG-A---------TGAACGA-GAA-----GGAACA-TAAA--NTN-TCTCAGTATG--CNGA-CG-AC-A-C-TT----C----T-TNGCTCTTGATGGTNCCCCNAAGTCTTT-TTTCGC----TGCCCTT-GATACA---ATTGA-NTTTTTACTC-T---A-NTTTT-CTGGATTACAAATA--AATAGC-T---CAAAAAC--AAAAATNG-TTTGGATNGGNT---CTAAAANATTTTC----TAAAGAAG--TA-TNTCA-CCAT----ACA--A-GGNGGAA-GCTGGANT--GGGATGTACTG--ACT---TTCGATCTTAT-TAGG-NAT-A-GAATTT--TCG---GTAGA-TTA--GAATAAA-ATNGCGGATTT-----A--AATTACGAAATT-CAGAT--ACCAAAAAN-NAAA---GCTA-TGATACAACA--GTGGAANAGAA-GAA----A----AC-CA-CT--CCTCANTAG-GTCGGGT-NNACAG-TTGTTCAAAAG--ACACTACTTAT-CCCA-AAACTTAATC-AC--C-TNTTTATTC-C-CTCTACCAAA--CCCTAAA-AAAGAG-A-TATT--T-GTC-T-CT--NT-AAATAGT----T-TTTTT--AATTCATNTGGA-TGCCNAANATCAGACA-GGGTCAANCAAGGACAANCTGTTACTC-CAACGNCCTACTTGAAAAG-TGG--CTTAAAAAT-G--T--GAGTG---A--A------AAACTTNT-AT----TCTTTAAA-G----TACATGTGATAAGANNGTTAACAAACTGATCGCTACAAACCATGGTTAGATA-TTTTCTTTNAAATCCNTGGCAACAAT-GTGGCTACAAAAATTTNTTG-GATTTTGGTGATG-A-ATA---T-TAAAA-TGG-T-TATG-ATC-ACAGTA--GA-T-TTCGG-CACG-ATG--TTT-CCAGTCATTGG-TTGTC---TATGGTGAAACAA--TGGA-TAAT-AATCATTCA---AGTTCAAAA--TT--TTA---TTCTGT-CCC-G-TATGGTATAATA-CA-AATATCTGT-GTT-GGAAATAAAAGTGCTTATGTTTAAAACATGGCANGCTCCAT-GGTGTGAAAAATAATTNGGCGAACCTTCTTTAGAATGAAGANTGGAAA
Reference ( gi|1 ) : CGGGCTAAATGGGTGGAAGA-AGGGA-AAACCTAGTAAATATTTCTGTGCTTTAG-ATCTCGTA--ATTTTTTAATTAAAT-ATCAAAAAAGG--TAAAAC-A-CAAGAAGTCGAGGTATTTATAACCAGTTGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGTTCAAAATTCTCTGGATAAAGTAATCTGAAAAGTGAAATTT-T-TACAAGTCT-GAAAAAA---GAAAAATTACAAA-TCCACCAGG-AA-T----GATGGAT-T-CA--T-GTT--GAGTTTCTTTAAGTTT-TTT----GGAAGGA-ATC---------A--AGA---AA-----T--A---TGT---AG--AAGT-GTT-TAATT-CAAATTTTTAAGA-AAAG-GAGCTT-CCAATA--TCACAAAGAC-T--GGATTTAATCACT-TGTTTGCCAAAAGGTGA--AAACCTAGACA----A-TTTCTGAAAAA-TTTGGCGTCC-------A-TT--CT---CT--T-TT--A---AAT-----------G-TGCTT-TGAA-AAC--T-TATATCGGGC-CTGTCT---T--TTA--CTACA-GAATTAAAATCTACTTCTT-G--ATTATTT-GATATCGG-ATTG-TCAAT--CT--G--TTTAT---AAAGGG----T-AAT----CATA-----GTAGA-TA-A--CA--AGATTTGTGTATGATCTCAATG-----C-T--TT---CACT-AATTGGACTAAT-ACA---TCCAGGATACACTT-GTGCTCTATAGATT-TTGAAAAAGCTTTCGA--CT----C-A-TATC-T-GGA-AG----TTTATTCTATAAA-GTTCTTAA--AC---CT-TGTATTTGG---G---CGA---AT--ATTATAAATTACA--T-GGGT-TAAAATTTCTAAATATTCAAA---C-A-T-AA-AG---CATCTG-TA-TTACA-AA----GCG-GTTCCT-TTCCAGAA-AG--CAAATTG-AT-AT-ACAAGAGAGCGT---TG--GCAGACA--GG-AG-AACCCTA-T--C--G-CAATCCATAT-------T-----ATTT--TCCT------TGT-C---GAAAT---TCTAG-TCTATT-CT--T-G-T---CAAAGCA-AA----ATAA---TGA-------GATAT------TA-TGG--A-TAATG-A---------TGAATGAGGAA-----GGAGCA-CAAA--ATC-TCCCAATAT---CAGA-CG-AC-A-C-TT----T----T-TGGCTCTGGATGGTTCCCCAAAATCTCT-TTTTGC----TGCTCTT-GA-ACA---AGTAA-ATTATCACTC-T---A-CTTTT-CTGGATTACAAATAGGAATA-C-T---CAAAAAC--AAAAATAG-TTTGGATAGGCT---CTAAAAAATTTTC----TAAAGGAG--TA-TA-CA-CCAT----ACA--A-AGC-AAA-GCTAGAGT--GGGAT-TACT---ACTA--TCCAATCTTAT-TAGG-CAT-A-GAATTT--TC----GTGGA--TAT-GAA-AAA-ATAGTGGATTA-----A--AAATACAATATT-CA-AT--ACC-AAAAT-TAAA---GCTT-TGATAC-ACA-TCTGGAATAGAA-GAA----A----AC-CA-CT--CCTCATT---GTCGAGT-CCACAG-TTGCTCAAAAGACACACTGCTT-T-ACCGTAAGCTTAATC-AT--T-TGTTTATTGGCACTATACCAAAATTCC-----AGAGAG-A-TACT--T-GTC-T-CT--CT-GAATAGTTTGTTCTTTTTCGAATTTATATGGA-T-TCAAAGATT-GACATAGGTT--ATAAAGACAAAC-GTTACTGGCAAGAACCGACTT--AAAG-TGG--CTTAAAAAT-G--T--GAGTGTTGA-TA------AAACTTTTTATAGCATCTTTAAA-G----TACATGCGATAAAAGGGTTAACAAACTG-TCATTCAAAACCATGGTTAGATATTTTTCTTTGAAAT-AAT-GCATAAATGGTGG-TAC-AAA--TTGTT--GATTTTGGTGATG-ATATA---T-TTAAA-TGG-T-TATGAATC-ACAGTAAAGA-T-TTTGG-CATGAATG--TTT-CCAGTCATTGGTTTGTC---TCCTTTAAAACAATGTGGA-TAAA-AATC--TCA---AGTTCAA----TT--TTATCGTTCTGT-CCC-A-TATGGT-TAATATCATAATCTC-GT-GTT-GGAAATAAGAGTATTTATG-TTAAAAAATGGCAT-CT-CATGGGTGTG-AAAATAATT--GCGA--CTT-TTTAGTATGATGATTGGAAA
gi|5 : AGATGGGTGGAGGAGAGCGAGAAATCCACTAAATATTTCTGTAACCTAGAATCTAGAAACACTCCTTAA--AAACAATCAAAAAAGGGTTAAAACTATCGAAAAGGTAATG-ATTGATACTCATTCGGA-CAT
gi|11 : cacgatcaTCTGAAA-GTGAAATGT-TGTACA-GTCTTGTAAGGATAGGATTAATAACAAA-TACACCAGG-AAGT----GATAGAT-TTCAACT-ATTTGGAATTTGTTAAAGTTT-TTTTTTTG--AGGACATC---------AGAAGA---AT-----T--AATTTGT---GA--ACGT-GGT-TAAT--CACATTTT-AAGATAAAGAGAGCTT-CCAATC--TCACAAAGACGG--GGAT---ATCACT-TGTTT-CCAAAAGGTGAT-GAACCTCGATA----ATTTTCTGAAACATTTTGGCGTCCA------A-TT--AT---CTTCT-TT--A---AAT-----------G-TGCTTGTACA-AAC--TATATAGCGGA---TGTC-------TTAG-CTACA-GAATACAAATCTACTCCTT-A--TCTA-TT-GATAgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggtgaacgtgaaatttgttagcgttaaagaatatgaaaaacaacaaatcaaccgggaaagatggatttacagcagaattttacaagttcgtttggaatgaagctatttattaaagatgtaaagatctatattacaaaagcacttcatcatatatttcagtgtatacatttgccagcatcacaaagacttgagattatactatgttaacacaagggagataaagcagagagtgttaaaaatggcgaccaataactcttttaaaatatttctgcacggtgcttttaacaaattatacttctttctatctggtctt
gi|5 : AACGTGAAATTTGT-TA---GCGT-TAAAGAATATGAAAAACAACAAA-TCAACCGGG-AA-A----GATGGAT-T-TA--CAGCA--GAATTT-TACAAGTTCGTTT----GGAATGA-AGCTATTTATTAA--AGATGTAAAGATCT--A---TATTACAA--AAGC-ACT-TCA-T-CATATATTTCAGT-GTAT-ACATTTGCCAGCA--TCACAAAGAC-TTGAGATT--AT-ACTATGTTAACACAAGGGAGAT-AAAGC-AGAGA----G-TGT-TAAAAA----TGGCGACC-------A-ATAACT---CT--T-TTA-A---AATATTTCTGCACGG-TGCTT-TTAACAAA--T-TATAcgat
gi|25 : cacgatcaagatgggtggaggagagcgagaaatccactaaatatttctgtaacctagaatctagaaacactccttaaaaacaatcaaaaaagggttaaaactatcgaaaaggtaatgattgatactcattcggacatgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggtg---GAAAAATAACAAA-TCT-CCAGGTAG-T----GATGGTTAT-AG--T-GTT--GAATT--TTTAAATTT-TTT----GGGGGTAGATCTGA------A--AGA---AAT----T--A---TAT---TA--AAGTCAAT-TAATTGTATATTCTCCA-A-AAAG-GAGCTT-CCCATcttctttctatctggtctt
gi|30 : aatat---GAAAAATAACAAA-TTT-CCGGG-AAGT----GATGGTT-T-TA--CAGTT--GAATTT
gi|2 : atAAAAATAACAAAATCTTCCTAG-AG-TAGCCGATGGTT-A-CA--C-AAC--AGAATTCTTCAATTTT-TTTT---GGAATGATATT---------A--AAA---TA-----TTTA---TGT---TGTAAAGA-GCCATAAAT-TGTATTTTTGTAA-GAGG-AAACTT-CCC-TACTTCACAAAGAC-TA-GGAATTATTT-CT-TGTTTACCTAAAGGTGAC-AAGCCAAGACA----G-TTTTATAACAA-TT-GGAGGCC-------A-AT--TTACACT--T-TT--A---AAT-----------GGTACTA-T-AC-AACAAT-TATATTCTGCGTTGTCT---TAGCTA--CT-CA-GAATAAAAAA--AAGTTTT-GGAATTATTT-AATATATG-ATAC-ACAGT--CTGGG--TTTTT---GAAGGAAGATT-AAT-----ATAG----GGAGA-GA-A--TACTCGATTTATTTATGACATGTATG-----CAT--TA---CACT-GAAAGGA--AACAATA---TCCAGGTCAT-CTA-GTACTTCAT-GA-T-TTGAGAAGGCCTTTGA--CTCATGC-A-TGTC-T-----------TTCATT-TATAAG-G-TGTTAT--ACTATTT-TGGTTTTGG---G---GAA---AC--TTT----ATTCCAAGT-GGAT-AAAGATTT-TAA--ACTCAAATTTC-A---GA-GG---CTTCAA-TT-TTACA-GA----GTG-GATTTT-TATCAGAA-----CAGTTCG-AC-AT-ACAAAAGAGGGG---GT--GTAGACA--GG-GG-GACCCTA-T--T--G-CCAGCCATATTTATTCAT-----ATTTA-TGCT------GGC-C---GAAATA--TCTTG-CCAATA-GT--TAA-T---TAAGACA-AA----ACAA---AGG-------TATAT------AA-AGG--A-T-AT--A---------TGTATAAAAAAACACTGAAACA-TAAG--GTTATCACAATATATGCAGA-TGAAT-A-C-TT----CCCCAC-TAGCCCTTGATGGTTTCACAA
gi|16 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatga-AAAG-GAGCTC-ACTATT--TCATAAAGAT-T--AGGAATAATCTCA-TGTTTGCCAAAAAGTGAC-AGACACGGACACAAAA-TTT-TGGAAAA-CT-GATGTCC-------T-AT--AA---CA--T-TCGGA---AAT-----------G-T-CTTATGTA-AAC--T-TATATAAAAA-C-GTA--------TAAGCTACG-GAATT-TAATATAC-GCTA-G--ATTATAT-AATATCAG-GTAC-TCAAA--CT--G--TCTTTCTGAAAGGA----A-GATG---CATG-----AAAAA-TA-A--tactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|23 : ttttcttttttttgggggggggggggttgatttttaaaatattcatagtacaaagaataaataacatatatattccTGCCTAAAGGTGAT-AAACCAAGACA----A-TTTTTAAACAA-CT-GGCGTCC-------AATTA-CA---CT--T-TT--A---AAT-----------G-TACCA-TACA-AGT--T-TATGTCGGG--TTGTCCAAGT--TT------CA-GAATTTAA---CAGGTCTTGG--ATTATAT-AATTTCTG-ATaa
gi|10 : aGGTGATTAAACCTAAACA----A-TTTTTTAAAAA-ACTGGTGACCG------A-TT--AC---AT--TGTT--A---AAT-----------G-T-CTTATATA-AAC--T-TATTTCAGGT--TGTCT---T----A--GTAAAAGAATCAAA-TCTACTT-TA-G--GTCATCTCAAT-TCAG-ACAC-CCAGT--CT--GGATTCAT---GAAGGG----A-AGA----TATATTG--GTAAA-AATA--CC--AGATTTATCTATGATCT-AATG-----C-A--TTATACAGA-AA--GTAATAAT-AT----TCCAGGAC-TATTG-GTATTG-ATAGACT-TTGAAAAGGCTTTTGA--TTC---C-A-TTTCAT-GGT-CA----TTTA-TATATAAA-GTATTGAAATAT---TT-TGGATTT-G---G---TGA---ATACATT----ATTGAA--T-GGGT-AAAGATTCTTAAa
gi|4 : gttacacaacaacttaaatactcAAAAA-CCTG-CGTCCCCAATACA-CT--TT---CT--T-TT--ACTGAAT-----------G-T-CTTGTATA-AAC--T-TATATCAGGA--TGTAT--------AAGCAACA-GAATTACA-TCTACCACTA-G--ATTATT--AATATCAGCGTAGCTCAAA--CT--GGCTTTCT---GAAAGC----TGAATGATACATA-----GGAGA-AA-A--CACTAG-TTTATTTATGATCTTGATGTTTTTC-T--TT---CACA-GA--AAGCTAAC--CAAATTCCAGGAT-TACTA-GTACTTTTTGGATTCTTGAAAAGGCTTTTGA--TT----CAA-TTTC-T-TG---GTCCTTTTATT-TACAAACGTTTTAAA--AT---AT-T---TTTGGTTTG---CGGATCAT--ACTGT---TTACGATT-GGAT-TAGAA-TTCTGAACA--CAAATT-C-T-C-AACAG---CTTCGG-TT-CTACATAG----GTGCGTTTCTATTCTGCAACAGTTCAAAATG-TT----------GAACGTCGGTG--GCAGACAACGGCGG-CATCCTGTT--T--GTCA--CCATA--------T-----ATTTTCTCCT------TGTGCTTAGCAA----TCTGGCTCT-CT-CTGAT-G-CAAACAAAACA-AAGACTATAAAATTGC-------TATCT------TGTTGC--ATTAACG-ATTTTTCTTTTAAACG------------AACA-TAAA--CTA-TCTCAGTATG--CTGA-CG-AC-A-C-TTCCTCT----T-CTCCTTCGAAT-GTACTCCTAAGTCTTTATTCCGC----TGCCCTTCGA-TTACCTATTGA-TTTTTTTCTCAA---A-ATTCT-CAGGACTCCAAATA--AATA-CTT---CAAAAACTTAAAATTAT-CTCGGATTGA-T---CAAAAAAATTCTCGGCATGAAGTCA--T--TT-CATCCATTTCGACC--G-ATG-GAA-GCTGGATTG-GGGATGCACTG--ACT---TCTCAT-TTATATAGG-AAT-A--CATTT--TCGAGGGTAGA--CAT-TAA-CAA-ATTACGAACT------A--AATTATGGAATT-CAGAT--ACCAAAAAT-AAAA---GCTA-TGATACAACAGTGCG----AGAA-GAA----G----CC-GATCTAACACCAATAG-GTCG-GTGTAACAGCTTGTT---AAG--ACACTACTTGT-CCCCAAAACTCAATC-AC--C-TTTTTATTCTC-CTCTACCAAA--CCCTAAAAAAAGAG-ACTATT--T--TCAT-CA--TT-AAGTAAAGAGTTATTTC---AATTCATTTGAA-TGCCTAACATCAGATA-AAGTCAAACAAGAACAACT-GTTAC---CAACGACCTATTTGAAAAG-GGGGTCTCTAAAATGG--T--GCGT-TCGATTATTTACTAAATTTATTATTTC-TCTTGAAATG----TTCATG-GATA
gi|3 : TACTTC---G--CTTATTT-G-TATCGG-ATAG-TCAAGGGTT--G--TTTAT---AAAGGT----C-GA-----CATACATTGGAAGAGTA-ATGCA--AG-TTTGTGAA-GATCTCG-TG-----C-TCTTT---CACTGAATTGGACCAAT-ACA-----CAGGG-ATATTT-GAACTC---AG-TT-GTGAAAAAGCTTTCGAGACT----C-A-TATC-T-GGATAG----TTTAT-CTATAAA-GTTCT--A--AC---CTATCTACTTTG---G---------AT---TTGGAGAT---------GGTGTAAAATTTGTAAA-A--CAAA---CCA-T-AG-AGGAACATCTG-TACTTACA-AA----GCGTATTTCC-TTTCATAA-CA--CATATTGCATTAT-ACCAGAGGG--T---TG---CAGACAA-GG-AG-TATCCTA-TGACTAG-CGA-CCATTT-------TT----GTTA--TTCA------TGG-C---AGAATGTATCTAG--CTATTTCT--T-G-C-----AAGCGCAA----ATAA-----A-------GATAT------TA-AGGTGA-TA-TGTA---------TGAATGATGC------GGAGCAACAAA--ATC-TCTCAATATG--CAGATCT-ACCA-C-AT----T----T-TGGCTCTTGATGGTTCCCCAAAATCTCT-TTTTGCGTTATGCTCTT-AT-ACA----TTAACACTTTTACTC-T---A-CTTTTTCTGGATT-CAAATA--AATAGC-T---CCAAAA---AAAAATAG-TTTGGATAGGCTT--CTAAAACATTT-C----TAA-GAAG--TA-TATCA-CCAT----ACACAATAGG-AAATGCTGGAGT--GGGATGTACT---TCT---TTCAAGCTTAT-TAGGGCATTG-GAATTTC-TT----GCCGA--GA--GAATAAA-ATGCAAGCTTTTTTCTA--AATTACAATATTTCAGAT--ACC-AAAAAATAAA---GCTTATGATAC-AG----TTGAATAGAAAGAA----A----ACTCA-CT--C-TCATT---GTCG-GC-GCACAG-TTGC-CAAAA----CACTACTT-TTACC-TAAGCTTAATCCATCTT-TGTT-AT--GCACTG--CCAAA-TTCA-----AGATAA-A-GAATAAT-GTC-TTCT--CTTGAATAGTTT--TTTTTTT---ATTACTATGGAAT-TCAA-GATT-GACA-GGGTT--C--AAGACAAACTGTTACTC-CAAGATTC-ACTTGAAAAG-TGG--CTTAAAAAT-GGTT--GAGTG---A--A------AAACTTC---------CTTTAAA-GACTGTACATGTGATAAGAACGTTAACAAACTGATCAC---AAACCATGGTTAGATA-TTTTCTTTTAAATCCATGGCAACAAT-GTGGCTACAAAA--TTTTTGCGA-TTTGGTGATGAATATC---T-TAAAA-TGGTT-TATG-ATC-ACAGTAATGAGT-TTTGGCCATG-ATGTTTTT-CCAGTCA-TGGGTTGTCGTATGGTGAAAAACAA--TGGA-TAAT-AAT---TCATTCAGTTCAAAAG-AT--TTA----TCTGT-TCC-G-TATCGTATAATA-CA-AATATCTGTCGTT-GGAAATAAAAA-GCTTATGTTTAAAACATGACATGCT-CAT-GGT-TG-AAAATAATTTGGCGAACTTT-TTTAG-ATGAAGAT
gi|15 : TTTATGTATGACATTA-TGT----C-A--TA---CACTGAAATAAAC-AAT-AT----TCCAGG-TCTTCTA-GTACTC-ATTGATT-TTGAGAAGGCCTTTGA--CT----CAA-TGTCAT-GGT-CT----TTCA-TCTATAAA-GTT-TTAA--ACTATTT-TGGTTTTGG---GAA-CAA---AA--AT-----ATTCAA--T-GGAT-AAGGATTT-TAAAT-TCCAAT---T-T-C-AG-AG---C-TCCGATT-TTACA-AA----ATG-GATTTT-TATCTGAA-----CAGTCCA-AC-AT-ACAA-AGAGGGT-------GTAGACA--GG-GG-GACCATG-T--T--T---ATTCATAT-------A-----AT-------G------TGC-C---GAGAT---TCTTG--CAATA-TT--A-A-T---TAAA-CA-AA----ACAA---gtaaag
gi|12 : ---TCCAGG-TCTTCTTAGTACTC-AT-GATT-TTGAGAAGGCCTTTGA--CT----C-AATGTCAT-GGT-CT----TTCATT--ATAAA-GTT-TTAA--ACTATTT-TGGTTTTGG---G---AAA---AC--TTTAT---TCA-A--T-GGAT-AAAGATTT-TAA--ATTCAAT---T-T-C-AG-AG---CTTCAA-TT-TTAC--AA----GTG-GATTTT-TATCAGAA-----CAGTTCG-AC-ATAACCAAAGGG-GT------------------------CCCTA-T--T--A-CA--CCATAT-------TTATTCATTT--TATG------TAC-C---GAAAT---TCT
gi|8 : tgaagggaagatatctataggggaatactcgatttattttatgagattatgtcatacactgaaagaaacagatatAGGAT-TACTT-GTGCAC-ATAGAAT-TTGAAAAAGCTTTCGA--CT----CCA-TATC-TTGGA-AG----TTTAT-CTAGAAA-GTACTTAATTAC---TT-TGGATTTGG---G-----G---AT--AATATAA-TTACA--T-GGGT-TAAAATTT-TAAATA--CAAA---C-AAT-AA-AG---CATCTG-TA-TTACA-AATTAAGCG-GTTTCC-TTTCAGAA-----CAAATTG-AG-AT-ACA-GAGAG-GT---TG---CAGACAA-GG-AG-A-CCCTA-T--C--G-CA--CCATAT-------TT----ATTTA-TCCTATG---TGC-A---GAAAT---TCTAG--CTATT-CT--T-G-T---CAA-GCA-AA----ATAA-----A-------GATAT------TA-AAGGTA-TAATG-A---------TGAATGATGAA-----G-AGCA-CAAA--ATC-TCCCAATATG--CAGA-CG-AC-A-CATT----T----T-TGGCTCTAGGTGGTTCCCAAAAATCTCT-TTTTGC----TGCTCCT-GATACA---A-TAA-ATTATTACTT-T---ATTTTTT-CTGGATTACAAATA--AATAGC-T---CAAAAAC--AAAAATAG-TTTGGACAGGCT---CTAAAACATTTCC----TAAAGAAG--TA-TATCA-CCAT----ACA--A-tgcaaagatataaagggtatatgtataa
gi|14 : TATTTTG---GTTTCGG---GG--ATTATATGTTAGA--TTGGAT-TAAGATT-CTAAATA--CATA---T-T-TCAA-AG---CTTCGG-TT-CTACA-AG----GTG-GTTTCC-TATCTGAA-----CAGTTCA-AT-AT-T-----GAACGT---GGTTGCAGACA--AG-GG-GATACTG-T--T--G-CA--CCATA--------T-----ATTT--TTCTCCTTTGTGT-A---GAAAT---CCTGG--CT-CT-CT--T-GAT---CAAA-CA-AA----ACAA-----A-------TATATAAAAGGTA-TTG----TAATT-T---------TAAACGA-TAA-----AGAACA-TAAA--CTA-TCTCAGTATG--CTGA-CG-AT-ACC-TC----T----C-TTGCTCTTGATGGTACTCCTAAGTCATT-ATTCGC----TGCCCTT-GA-gatggaac
gi|22 : tctaaaaCA--GG-GGTGATCCTG-T--T--G-CG--CCATAT-------------ATTT--TTCTGCTTTGTGT-A---GAAAT---CCTGG--CT-CT-CT--T-GAT---CAAA-CA-AA----ACAA---AGATATAAAAGGTAT------TG-TGA--T-TAATG-A---------T--------AA-----AGAACA-TAAC--TTA-TCTCAGCATG--CTGA-CG-AC-A-C-TT----C----T-tactattgattttt
gi|6 : T-CT--T-GAT---CAAA-CA-AA----ACAA-----A-------GACAT------AA-AAG--G-TATTG-----------TGATTAACGAT-----AAAATA-TAAACAATC-TC--AGTATG--CTGA-CG-AC-A-C-TT----C----TCTTGCTCTTGATGGTACTCTTAAGTCCTT-ATTCGC----TGCCCTT-GATACT---ATTGA-TTTTT---TC-TCAAA-ATTCT-CAGGACTAAAAA-ATAAATA-T-TT--CAAAAAC--TAAAATTA-TCTGGATTGAATAAAAAAAAAAAATCTC----GGATGAAG--TATTT-CA-TCAT----TCG--A-GATGGAA-GCTGGACT--GGGGA-TGC----GCTGATTTCAATC-TAT-TAGG-AAT-A-TATTTT--TCG---GTAGAATTA--GAC-AAA-ATTATGGAACT-----A--AAGTATGGAATT-CAGAT--ACCAAAAAG-AAAA---GATG-TGATACAACA--GTGGAGAAGAA-GGATTCTA----A--CA-C------CAATAG-GTCGGGT--AACAG-TTGTT---AAG--ACACTACTTAT-CCCA-AAACTTAATC-AC--C-TTTTTATTT---CTCTACCAAA--CCCTAAA-AAAGAGAA-TATT--TCATC-A-TTAAGT-AAAGAGT------TTTTTC-AATTCATCTGGA-cttg
gi|18 : TTT-CTGGTTT-TAA---GGTAAA-C-TGTACCAAAAC--AAAAATTGTTTTGGATCGGAT---C-AAAAAATTTatgctgaatcagataaagtcaaaagaacaactgagattatttgaaagggggtcttaaaatggt
gi|13 : gcgcgatgatacatcatcttgcccttgatgggaatctaagtcacttttttagctttagatacgtttagagttttttctccaaagc-T---CAAAGAC--AAAAATGG-TGTGGATAGGTA---GTAAAACATTTTC-----AAAGGAGGTTT-TC-CA-TCAT----TCA--A-GGTGGAA-ATTTGACT--GGAA--CAATGAAAC-A--TTGGAT-TTAC-TAGG-GAT-A-AGATTCAACA----GT-AACTTAC--AA-GAA-ATGGTTGA--A-----ATGAATTATAAGACT-AA-ATTAAAG-GAAAT-TAAAAAGGTTA-TGATGC-A----GTGGAATAGTA-GAA----A----TCGTA-CT--CCTcagatctggtcttttcatcattcagatggaaattgctgggctcaacaacttttaacttactaggccaaaactaatataggtttttt
gi|26 : agttctccaacttctatggatgacattattagagtcctagattacttggcaataatttcaggtctaaggataaattttCTAGAGTAGGGGATGTACTA--ACT---TTCAA-CTTAT-TA-G-CAT-AGGAATTG--TCT---GTGGAG-TAGAGAATAAATATAGTTGATTT-----A--AATTACAAttaggaaggctaacagtaataaagacaccaaaattgaatcac
gi|9 : TGGAAGAGAA-GAA----ATTCTAT-TA--T--CCTTACTCTGGTCGGGT-ACACTG--TGATTAAA--ACAC-TTGCTTAT-TCCA-AAATTAAATC-AT--TGTGTTCATatggagggtgcagatacgccaaagagttaagt
gi|20 : tgaggaaattgaagatataaattttaggaactcaaattccttaaaattgtttctctcattgaacgag--AAAGCTGG--CTTAAAATG-G--TTGGAGTG------A------AAACGTGT-ATA---TTTTTAAA-T----TACATATGATCAAACG-TTAACAA-CTG---GTTACAAACCATGGTTAGATA-TTTTCTTTG--AT-CCTGGCAACAA--GTGG-TAC-AAAATTTGTTA-GATTTTCGTGATG-A-ATA---TGTTAAACTGG-TATATG-ATC-ATAGT---GA-TGCTTGG-CAAG-ATG--TTT-TCAGTGATaatctcttgctactccttataaaagtacatatgttccatattcattttattcaaaaattctttattttgaattcttgttgagcaatctagtgtagagttaatgtagtcaactaggtctggtaagtaaaccaagagctattctgatcatagtatggatttgctgggagtttagttatacaagcatgtggtagatgaggtaaacaactttattatattccgctgaaatcactcgatgggattataactaaggtgctatactaaggtcatctctgccctcaattc
gi|17 : g--GATTTTGGTGATG-AAATAGTGT-TAAAA-TG--T-GATGAATCCACAGTATGAG-T-TTCGG-CACTGATG--TTTTCCAGTC-TTGGTT-GTC---TATGGTGAAACAAGATGGAATATATAATCATTCA----GTTCAAAATATG--TT----TTCTGTTCCC-AGTATGTA-TAATA-CA-AATATC-GT-GTTTGGAAATAA-AGTATTTATG-TTAAAACATGGCAG-CTCCAT-GGTGTGAAAAATAATTG-GCGA--CTTCTTTAGAATGA-GAATGGAAAgtt
gi|27 : --TTT-CCAGTCA-TGG-TTGTC---TATGGTGAAAAAA--TGGA-TAAT-AATCATTC----AGTCCAA----TTTATTAT--TTTTGT-CCCAA-TATGGTATAATA-CA-AATCTCTGT-GTT-GGAAgt
6 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|7 ): CAATGGAATGCGGAAAATTCCACGTCTTCTAGTTTAATTGATTTTGAGAAGGCTTTTAACTTGGTCCTTCAGATATAAAGCTTTCAAGTAATTTGGTTTCGGATAATATTTCATTCAATAGATAAGATATTTTAAGACACAGATATCAGAGCTTTCATTTTACAAGAGTAGAGTTTTATCAGCATAGTTAGATATACAAATGGTATGTAGAAATGCACCATATTTATTTCTCATATGTGCTGGAATTCAAACAAAACAAAAATATAAAAGACATATGTTCAGTGTATTGAAAACACAGAACATGATATATCGCCATATATATGCAGAATATACTTCAGTAGCTCTTCATGGTTTAACTGCATCCCTGGTATTGGTGTTTGATACAATAGAATTTTTTGTACAGTTTTTCTGGTCTAAAGATTAATTCTTCTACACGAATAGTGGTCTGGATTGATTAAAAAAAATTCAGAACCAGTTTTTCATCATAGAAGATGGAAATTGGATTGAGGGTTCTTAATATCTAACTTATTGGATATTCAAATTTCTGTTGA
Unaligned ( gi|19 ): GTCTTTTGTTTATAAGGTTTTAAGGTTTCTTTTTAATGTGGTACAAATACGATAATTTTATAAAATTGGATGAAATTTTAAATAATTTTAAAGCTTCTATTCTTCAAAGTGGCTTTTTATTAGAAGAATTTCATTGATGTCGTCAGGGAGACCCTGTTTCTCCGTACATTTTTCTTCTTTGTGCAGAAATTCTTGCAATTCTCATTAAACAAAATCATGAT
Unaligned ( gi|21 ): CATCTCATTTTGGATGATACAAGGAAAGAATATGGAAGAGATTGCAAGATTCATTTCTGATTCAGAATTATAATAACTGGACTTTTAGTATTATTTGATTTGGAGGAAGCCTTTGATTCTATTCCTGGTCATATATTTATGAAGTACATGTATAAGAATTGTTTGGATTTGGAGAAAGTACGACGTCTTATTTACGGAGTAAAGAT
Unaligned ( gi|24 ): GCTTACTAATCAGAATGTCATAAATCTTGGGATTAATATTTTTTTTGCTGTGTATGGAAATGATATTCTTATGAAGTTATTATGATTTTGGAGATAGTTTTTATGATCAGAAGATGTTTCTTAAGGAAAAAA
Unaligned ( gi|28 ): TCCCTACTTCCAAACGGGATACAATTTCATACTTATAAATTCAAAATTTTATTTCGATTCTTACGGAAATCTAATAGTTTATGGTAACACAAGACTATCTATC
Unaligned ( gi|29 ): CTTGAGCAGAAAGAAATGAAAAGTGGTCTATTTCATGCCATGCTTTGGATG
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 22 1 11 222 2 2 555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 1 333 1 11 1 11 1111111 1 1111 4444444444444444444444 111 111 222222 111 111 111 222 33333333333333333 11 22222222222 1 11 5555555555 1111 2222 222222222222222 1111 11 22 222222 22222222222222222222 1111 11 111 1 222 1 5555555555555555555555555555 11111 222222 111 3333333333333333333 222 111111 444444444444444444 11111 111 11111 22 33 11 66666666666666666666666666666666666666666666 111 222222 11 1111 1 1 222222 1 111 11 22222 11111111111 111 1111111 11 111111111111 11 1111111 1111 33333333333 111 111111 22222222222222 11 444444444444444444444444444 11 333333333 222222 33333333333333 11 5555555555555555555555555555555555555 1111 2222 11111 11 11 3333 1 33333333333333333 11 11111 55555555555555555555555555555 22222 11 1 333333333 1 1 1 111 22 2 222 22 2222222222222 111 1111 4444444444 1111 1 11 1 1 111111111 1 1 1 2 222222 44444 22 1 1 1 1 1 2 22222 1 2 2 44 1 1 1
lowQualScore : 5 2 5 2 3 5 3 4 88 77 5 88 222 2 3 0 2 2 3 0 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 5 1 777 2 55 0 0 3 6 6 22 2 999999 6 4444444 6 3 3 5 4444 1 7777777777777777777777 555 444 666666 99 1 8 444 777777 6 6 77 1 8 4444 99 8 3 1 88 6 000 000 444 0 55555555555555555 66 5 11 888 33333333333 5 2 7 1 5 5 77 33 2222222222 1 77 66 7777 555 2 5 5 1 1 5 5 1 6 3333 1 5 999999999999999 0000 5 22 0 1 7 1 5 0 00 000000 5 44444444444444444444 4444 4 1 666 66 4 0 0 66 555 3 0 4 6 4 333 4 9 9999 7777 1 5555555555555555555555555555 1 55 7 1 3 2 3 7 3 33333 666666 4 111 1 4 4 4 8888 1 4 1 1 4 4 55 1 8888 1 1 4444444444444444444 0 6 3 88 77777 888 000000 999999999999999999 00000 000 5 3 44444 3 6 3 33 44 4 4 8 7777 22 22222222222222222222222222222222222222222222 4 4 1 1 4 333 1 4 4 4 4 999999 1 1 11 66 11 1 0000 2 0 5 777 55 66 2 66 444444 0 0 0 000 66 44 66 55 4 1 4 4 1 1 44444 1 2 00000000000 111 1 4 2222222 66 44 66 1 00 333333333333 4 6 44 4 66 2222222 5 6666 4 5 22222222222 5 5 111 777777 00000000000000 5 2 66 00 22 888 99 7777 555 5 1 1 5 555555555555555555555555555 0 33 5 1 111111111 5 0 000000 5 4 5 6 1 6 44444444444444 3 99 00 1 6 6 0000000000000000000000000000000000000 7777 5555 88888 8 99 1 77 77 00 3333 6 55555555555555555 1 1 2 55 6 55555 99999999999999999999999999999 11111 33 7 3 0 22 3 222222222 0 0 0 2 0 88 999 6 00 3 7 999 1 22 3 6666666666666 2 777 4444 2222222222 2 5555 0 99 0 9 0 0 999999999 0 0 0 3 7 333333 22222 33 8 3 0 0 3 5 0 0 7 888 3 55555 3 6 3 7 77 2 6 7 4
lowQualScore : . . . . . . . . .. .. . .. ... . . . . . . . ...................................................................................................................................................... . . ... . .. . . . . . .. . ...... . ....... . . . . .... . ...................... ... ... ...... .. . . ... ...... . . .. . . .... .. . . . .. . ... ... ... . ................. .. . .. ... ........... . . . . . . .. .. .......... . .. .. .... ... . . . . . . . . . .... . . ............... .... . .. . . . . . . .. ...... . .................... .... . . ... .. . . . .. ... . . . . . ... . . .... .... . ............................ . .. . . . . . . . ..... ...... . ... . . . . .... . . . . . . .. . .... . . ................... . . . .. ..... ... ...... .................. ..... ... . . ..... . . . .. .. . . . .... .. ............................................ . . . . . ... . . . . . ...... . . .. .. .. . .... . . . ... .. .. . .. ...... . . . ... .. .. .. .. . . . . . . ..... . . ........... ... . . ....... .. .. .. . .. ............ . . .. . .. ....... . .... . . ........... . . ... ...... .............. . . .. .. .. ... .. .... ... . . . . ........................... . .. . . ......... . . ...... . . . . . . .............. . .. .. . . . ..................................... .... .... ..... . .. . .. .. .. .... . ................. . . . .. . ..... ............................. ..... .. . . . .. . ......... . . . . . .. ... . .. . . ... . .. . ............. . ... .... .......... . .... . .. . . . . ......... . . . . . ...... ..... .. . . . . . . . . . ... . ..... . . . . .. . . . .
lowQualScore : 0 5 0 5 0 5 0 0 00 55 5 00 000 5 0 0 5 5 0 0 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 0 777 0 00 7 8 3 7 7 00 2 555555 7 0000000 7 3 2 0 8888 0 6666666666666666666666 666 000 000000 44 0 0 888 111111 7 7 77 0 0 2222 22 0 7 0 00 6 000 444 666 5 44444444444444444 99 0 99 888 88888888888 0 8 4 0 0 0 99 33 4444444444 9 99 11 1111 555 8 0 7 7 0 7 7 0 7 3333 0 7 666666666666666 6666 7 33 7 8 3 0 7 7 00 111111 9 00000000000000000000 3333 4 0 222 44 4 7 7 11 999 7 3 0 6 0 999 0 1 6666 7777 0 7777777777777777777777777777 0 00 3 0 6 6 6 3 6 44444 111111 0 000 0 0 0 0 5555 2 0 0 0 0 0 55 0 5555 4 4 3333333333333333333 8 5 6 77 44444 111 333333 555555555555555555 55555 000 7 6 99999 6 5 6 88 77 4 4 3 8888 22 33333333333333333333333333333333333333333333 4 4 0 0 4 999 0 0 0 0 0 444444 0 0 11 99 99 1 6666 2 0 0 888 44 00 4 33 666666 0 8 8 999 11 44 11 88 4 0 4 4 0 0 77777 0 2 00000000000 222 0 4 9999999 11 44 11 0 66 777777777777 4 2 11 4 00 9999999 0 4444 0 0 33333333333 0 9 555 999999 66666666666666 0 2 99 55 00 888 44 7777 999 7 0 7 7 666666666666666666666666666 7 11 7 6 666666666 7 9 666666 7 0 7 7 0 7 88888888888888 5 22 22 8 7 7 3333333333333333333333333333333333333 0000 8888 00000 0 22 0 66 00 88 6666 4 22222222222222222 0 4 5 88 7 88888 22222222222222222222222222222 55555 88 0 5 5 00 2 000000000 2 0 0 5 0 33 000 7 77 3 3 777 0 00 2 5555555555555 5 000 8888 8888888888 0 2222 0 00 8 2 0 0 555555555 0 0 0 2 8 555555 00000 88 8 2 0 0 0 5 0 0 3 777 7 00000 3 7 7 0 00 0 0 3 0
consensus : NNNNNNAGATGGGTGGAGGAGAGNGAGAAACCCANTAAATATTTCTGTGNCCTAGAATCTNGNAACACTCCTTAATTAAACAATCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGTTCAAAATTCTCTGGATAAAGTAATCTGAAA-GTGAAATTT-T-TACAGCGTTN-AAGAATA-GAAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNG-AAGAAN-TA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGAATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAA-CTTGGCGTCC-------ANT--NT---CT--T-TT--A---AAT-----------G-TGCTTATACAA-ACT-TATATC--GGG-NTGTCT---TTTAG-CTAC--AGAATTAAA---ATCTACTTCTNGA-TTATTT-AATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGGGA-G---A--TN---CATA---GGA-GAN-AATACTAGATTTATNT-ATGATCTCGATG-T----CTTNCACTGAAATGGACT----AAT---A-TATCCAGG-NT-TA-CTAGTACT-C-AT--GATT-TTGAGAAGGCTTTCGA--CTC-A-TGTCATGG-TCNTTT-ATTCTATAAA-GTT-TTAAA--CTAT----TTTGGNTTTGG-G--CGAAT---ACTAT-A-ATT-----AAA--T-GGATNA-AGATT-T-TAA-A-TA--CAAA--T-T-CAG-AG---CTTCNGT-TTTACA-A-A----GCG-GNTTTTTAT-CAG-AA--CAGTT----CGACATAC--AAGAGA-G-GTTG-GCAGACAAGGG-GG-ACCCTGT---T-GC-A-CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAAA--CAAAACAA--AG-A-TATAAAA--G--ATAT-A-----TGT---AT---G-AACGA----------NAA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-TTC----T-TNGCTCTTGATGGTNCCCCNAAGTC--TCT--TTTCGC----TGCCCTT-GAT-ACN-ATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACT-ANAAATA--AATANCTC--AAAAACA-AA-AATNG-TTT-GGATNGGNT---CNAAAAAATTTTCNGAA-G-A---AGT-N-TTTCA-CCAT-N-C-A-A--GATGGAA--GCTGGANT--GGG--ATGCACTG--ACT-TTCAATCTTAT-TAGGN-AT-A-NA-ATTT-TCG---GTNG-A--TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC-GGA------ATT-CAGATA--CCA-AAAATTAAA---GCT-NTGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGGGTNCACAG-TTGTT-AAAAG--ACAC-TGCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT-ATC-TCT---TAAAT----AGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTCAA-CAAGAACAAACTGT--TACT-CCAA-GACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTGT----AAA--AAC-----TTNTATA---TCTTTAAAG----TA--CATGCGATNAAAANGTTAACAAACT--GATCGTTACAAA-CCATGG-TTAGATA-TTTTCTTTGAAATCCATGGCAACAAT-GTGG-TACAAAA--TTGTTG-GATTTTGGTGATGA-A----TA--T--TAAAATGGT-T-ATG-A--TCACAGT--A--GAGT-TTTGGC-AC-G-ATGTTTT-CCAGTCATTGG-TTGTC-TATGGTGAAA--CA--A--TGG-ATA-ATAA-TCATTC-AGTTCAAAATATTTATCG-TTCTGTCCC--GTATGGTATAATA-CA-AATNTCTGT-G-TTGGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAATT-GGCGA--CTTCTTTAG-ATGAAGA-TGGAAA
Reference ( family-2981 ) : NNNNNNAGATGGGTGGAGGAGAGCGAGAAATCCACTAAATATTTCTGTAACCTAGAATCTAGAAACACTCCTTAA--AAACAATCAAAAAAGGGTTAAAACTATCGAAAAGGTAATG-ATTGATACTCATTCGGA-CATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGAAACGTGAAATNTGTGTACAGCGTTNNAAGGATA-GAAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTCG-AATTT-TTCAAGTTTTTTT---GGAANG--------------ANATCTG-AAGAAA-TA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGANTTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TNAAAAA-CTTGGCGTCC-------ANT--NT---CT--T-TT--A---AAT-----------G-TGCTTGTANAA-ACT-TATATC--GGG-TTGTCT---TTTAA-CTAC--AGAATNAAA---ATCTACTTCTNGA-TTATTT-AATATCNG-ATA-CTCAANC-TG-G-TTTNTG-AAGGNN-A---A--TG---CATA---GGA-GAN-AACACTAGATTTATNT-ATGATCTCGATG-T----CTTTCACTGAAATGGACT----AAT---A-TATCCAGG-AT-TA-CTNGTACT-C-AT-AGATT-TTGAGAAGGCCTTCGA--CTC-A-TGTCATGG-TCGTTC-ATTCTATAAA-GTTCTTAAA--CTAT----TTTGGNTTTGG-G--CGGAT---ATTAT-A-ATT-----ANA--T-GGATNA-AGATT-T-TAA-A-TA--CAAA--C-N-CAG-AG---CTTCNGT-TTTACA-A-A----GCG-GNTTCCTNT-CAG-AA--CAGNT----CGACATAC--AAGAGA-G-GTTG-GCAGACAAGGG-GG-ACCCTGT---T-GCGA-CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTGG-CTACT-CT-TGAT-CAAA-GCAAAACAA-GAG-A-TATTANG--G--ATA--A-----TG----AT---G-AACGA----------GAA----GGAACA-TAA-ANTNTC-TCA---GTATGCNGA-CG-AC-AC-TTC----T-TNGCTCTTGATGGTNCCCCNAAGTC--TTT--TTTCGC----TGCCCTT-GAT-ACA-ATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGATT-ACAAATA--AATAGCTC--AAAAACA-AA-AATNG-TTT-GGATNGGNT---CTAAAANATTTTCTAAA-G-A---AGT-A-TNTCA-CCAT-A-C-A-A--GGNGGAA--GCTGGANT--GGG--ATGTACTG--ACT-TTCGATCTTAT-TAGGN-AT-A-GA-ATTT-TCG---GTAG-A--TT--AGAATAAA-ATNGCG-GATTT-----AAATT--AC-GAA------ATT-CAGATA--CCA-AAAANNAAA---GCT-ATGATACAAC-A-GTG-GAANAGAA-GAA----A----AC-C--ACTCCTCANTA-GGTCGGGTNNACAG-TTGTTCAAAAG--ACAC-TACTTAT-C--CCA-AAACTTAATC-ACC-TNT-TTAT--T--C-CCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT-GTC-TCT--NTAAAT----AGTTT----TTTT---AATTCATN----TGG-ATGCCNAANATCAGACA-GGGTCAANCAAGGACAANCTGT--TACT-CCAACGNCCTACTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG-----AAA--AAC-----TTNTAT----TCTTTAAAG----TA--CATGTGATAAGANNGTTAACAAACT--GATCGCTACAAA-CCATGG-TTAGATA-TTTTCTTTNAAATCCNTGGCAACAAT-GTGGCTACAAAAATTTNTTG-GATTTTGGTGATGA-A----TA--T--TAAAATGGT-T-ATG-A--TCACAGT--A--GA-T-TTCGGC-AC-G-ATGTTT--CCAGTCATTGG-TTGTC-TATGGTGAAA--CA--A--TGG-ATA-ATAA-TCATTCAAGTTCAAAAT-TTTA----TTCTGTCCC--GTATGGTATAATA-CA-AATATCTGT-G-TTGGAAATAAAAGTGCTTATGTTTAAAACATGGCANGCTCCAT-GGTGTGAAAAATAATTNGGCGAACCTTCTTTAGAATGAAGANTGGAAA
gi|1 : AAATGGGTGGAAGA-AGGGA-AAACCTAGTAAATATTTCTGTGCTTTAGA-TCTCGTAAT--TTTTTAATTAAATA-TCAAAAAAGG--TAAAAC-A-CAAGAAGTCGAGGTATTTATAACCAGTTGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGTTCAAAATTCTCTGGATAAAGTAATCTGAAAAGTGAAATTT-T-TACAA-GTCTGAAAAA-A-GAAA-AATTACAAA-TCCACCAGGA--A-T-GATGG-ATTCA--T-GTTG-AGTTTCTTTAAGTTTTTT----GGAAGG--------------A-ATC---AAGAAA-TA---TGT---A--GAAG-TGTT-TAATT-CAAATTTTTAAGA-AAAG-GAGCTT-CCA-ATATCACAAAGACT-GGATTTAATCACT-TGTTTGCCAAAAGGTGA--AAACCTAGAC---AATTTC-TGAAAAA-TTTGGCGTCC-------ATT--CT---CT--T-TT--A---AAT-----------G-TGCTT-TGAAA-ACT-TATATC--GGGCCTGTCT---TTT-A-CTAC--AGAATTAAA---ATCTACTTCTTGA-TTATTT-GATATCGG-ATT-GTCAATC-T--G-TTTATA-AAGGGT-A---A--T----CATA---GTA-GAT-AACA--AGATTTGTGT-ATGATCTCAATG------CTTTCACT-AATTGGACT----AAT---A-CATCCAGG-ATACA-CTTGTGCT-CTAT-AGATT-TTGAAAAAGCTTTCGA--CTC-A-TATC-TGG-AAGTTT-ATTCTATAAA-GTTCTTAAA--C-------CTTGTATTTGG-G--CGAAT---ATTATAA-ATT-----ACA--T-GGGTTA-AAATT-TCTAA-A-TATTCAAA--C-A-TAA-AG---CATCTGT-ATTACA-A-A----GCG-GTTCCTTTC-CAG-AAAGCAAAT----TGATATAC--AAGAGA-GCGTTG-GCAGAC-AGGA-GA-ACCCTAT---C-GCAATCCATA-TT----ATTT-------TCC-T------TGT-C---GAAAT---TCTAGTCTATT-CT-TG-T-CAAA-GCAAAATAATGAG-A-TATTATG--G--ATA--A-----TG----AT---G-AATGAG---------GAA----GGAGCA-CAA-AATCTC-CCA---ATAT-CAGA-CG-AC-AC-TTT----T-TGGCTCTGGATGGTTCCCCAAAATC--TCT--TTTTGC----TGCTCTT-GA--ACA-AGT-AAA-TTATCACTC-TA---C--TTTT-CTGGATT-ACAAATAGGAATA-CTC--AAAAACA-AA-AATAG-TTT-GGATAGGCT---CTAAAAAATTTTCTAAA-G-G---AGT-A-TA-CA-CCAT-A-C-A-A--AGC-AAA--GCTAGAGT--GGG--AT-TACT---ACTATCCAATCTTAT-TAGGC-AT-A-GA-ATTT-TC----GTGG-A--TA--TGAA-AAA-ATAGTG-GATTA-----AAAAT--AC-AAT------ATT-CA-ATA--CC--AAAATTAAA---GCT-TTGATAC-AC-ATCTG-GAATAGAA-GAA----A----AC-C--ACTCCTCATT---GTCGAGTCCACAG-TTGCTCAAAAGACACAC-TGCTT-T-A--CCGTAAGCTTAATC-ATT-TGT-TTAT--TGGC-ACT--A-TACCAAAATTCC------AGAG-AG----------A-TACTT-GTC-TCT--CTGAAT----AGTTTGTTCTTTTTCGAATTTATA----TGG-AT-TCAAAGATT-GACATAGGTTA--TAAAGACAAAC-GT--TACTGGCAAGAACCGACTT--AAAGTGG--CTTA-AAAATG--T--GAGTGTTGATAAA--ACT-----TTTTATAGCATCTTTAAAG----TA--CATGCGATAAAAGGGTTAACAAACT--G-TCATTCAAAA-CCATGG-TTAGATATTTTTCTTTGAAAT-AAT-GCATAAATGGTGG-TACAAA---TTGTT--GATTTTGGTGATGATA----TA--T--TTAAATGGT-T-ATGAA--TCACAGTAAA--GA-T-TTTGGC-AT-GAATGTTT--CCAGTCATTGGTTTGTC-TCCTTTAAAA--CA--ATGTGG-ATA-AAAA-TC--TCAAGTTC--AAT-TTTATCG-TTCTGTCCC--ATATGGT-TAATATCATAATCTC-GT-G-TTGGAAATAAGAGTATTTATG-TTAAAAAATGGCAT-CT-CATGGGTGTG-AAAATAATT--GCGA--CTT-TTTAGTATGATGATTGGAAA
gi|10 : cgggctGGTGATTAAACCTAAAC---AATTTT-TTAAAAA-ACTGGTGACCG------ATT--AC---AT--TGTT--A---AAT-----------G-T-CTTATATAA-ACT-TATTTC--AGG-TTGTCT---T--AG-TAAA--AGAATCAAA----TCTACTT-TAGG-TCATCTCAAT-TCAG-ACA-CCCAGTC-TG-GATTCATG-AAGGGA-AG--A--TA---TATT---GGT-AAA-AATACCAGATTTATCT-ATGATCT-AATG-C----ATTATACAGAAA-GTAAT----AAT---A-T-TCCAGG-AC-TA-TTGGTATT-G-AT-AGACT-TTGAAAAGGCTTTTGA--TTCCA-TTTCATGG-TCATTT-AT-ATATAAA-G-TATTGAA--ATAT----TTTGGATTT-G-G--TGAAT---A-CAT-T-ATT-----GAA--T-GGGTAA-AGATTCT-TAA-
gi|11 : gttacacaacaacttaaatactcTCTGAAA-GTGAAATGT-TGTACAGTCTTGTAAGGATA-GGATTAATAACAAA-TACACCAGGA--AGT-GATAGATTTCAACTATTTGGAATTTGTTAAAGTTTTTTTTTTG--AGG--------------ACATCAG-AAGAAT-TAATTTGT---G--AACG-TGGT-TAAT--CACATTTT-AAGATAAAGAGAGCTT-CCA-ATCTCACAAAGACG-GGGAT--ATCACT-TGTTT-CCAAAAGGTGAT-GAACCTCGAT---AATTTTCTGAAACATTTTGGCGTCCA------ATT--AT---CTTCT-TT--A---AAT-----------G-TGCTTGTACAA-ACTATATAGC--GGA--TGTC-----TTAG-CTAC--AGAATACAA---ATCTACTCCTTAT-CTATT
gi|12 : TG-AAGGGA-AGATA--TC---TATA---GGG-GA---ATACTCGATTTATTTTATGAGATT-ATG-T----CATACACTGAAAGAAACA----GAT---A-T-TCCAGGTCT-TC-TTAGTACT-C-AT--GATT-TTGAGAAGGCCTTTGA--CTC-AATGTCATGG-TCTTTC-ATT--ATAAA-GTT-TTAAA--CTAT----TTTGGTTTTGG-G--AAAAC---TTTAT-----T-----CAA--T-GGATAA-AGATT-T-TAA-A-TT--CAAT--T-T-CAG-AG---CTTCAAT-TTTAC--A-A----GTG-GATTTTTAT-CAG-AA--CAGTT----CGACATA-----------------AC---CAAAGG-GG-TCCCTAT---T-AC-A-CCATATTTATTCATTT-------TAT-G------TAC-C---GAAAT---TCTTG-Cgatacgat
gi|13 : TTT-CAGGTCT-AAGGATA--AATTTTTC--AAAGACA-AA-AATGG-TGT-GGATAGGTA---GTAAAACATTTTCAAAG-G-A---GGT-T-TTCCA-TCAT-T-C-A-A--GGTGGAA--ATTTGACT--GGA--A--CAATGAAACA-TTGGAT-TTAC-TAGGG-AT-A-AG-ATTCAACA---GTAA-C--TT--ACAA-GAA-ATGGTT-GAAAT-----GAATT--AT-AAG------ACT-AAATTA--AAG-GAAATTAAAAAGGTT-ATGAT---GC-A-GTG-GAATAGTA-GAA----A----TCGT--ACTCCT--TTA-GG-AAGGCTAACAG-TAAT---AAAG--ACA-------------CCA-AAATTGAATC-ACaaagatataaagggtatatgtataa
gi|14 : agttctccaacttctatggatgacattattagagtcctagattacttggcaataaTAAA--ATAT----TTTGGTTTCGG-G----GAT-----TAT-ATGTT-----AGA--TTGGATTA-AGATT-C-TAA-A-TA--CATA--T-TTCAA-AG---CTTCGGT-TCTACA-A-G----GTG-GTTTCCTAT-CTG-AA--CAGTT----CAATAT-T--GAACGT-G-GTTG--CAGACAAGGG-G--ATACTGT---T-GC-A-CCATAT------ATTT-------TTC-TCCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAAA--CAAAACAA--AT-A-TATAAAA--G--GTA--T-----TGTA--ATTTTA-AACGA----------TAA----AGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AT-AC-CTC----TCTTGCTCTTGATGGTACTCCTAAGTC--ATT--ATTCGC----TGCCCTT-GAT-ACT-ATT-GAT-TTTT
gi|15 : tcTTTATGT-ATGACATT-ATG-T----CATACACTGAAATAAAC-----AAT---A-T-TCCAGG-TC-TT-CTAGTACT-C-AT-TGATT-TTGAGAAGGCCTTTGA--CTCAA-TGTCATGG-TCTTTC-A-TCTATAAA-GTT-TTAAA--CTAT----TTTGGTTTTGG-GAACAAAA---AT------ATT-----CAA--T-GGATAA-GGATT-T-TAA-ATTC--CAAT--T-T-CAG-AG---CTCCGAT-TTTACA-A-A----ATG-GATTTTTAT-CTG-AA--CAGTC----CAACATAC--AA-AGA-G-GGT--GTAGAC-AGGG-GG-ACCATGT---T---------TATTC----ATAT-------AAT-G------TGC-C---GAGAT---TCTTG-C-AAT-AT-TAAT-TAAA--CAAAACAA-
gi|16 : -AAAG-GAGCTC-ACT-ATTTCATAAAGATT-AGGAATAATCTCA-TGTTTGCCAAAAAGTGAC-AGACACGGACACAAAATTT-TGGAAAA-C-TGATGTCC-------TAT--AA---CA--T-TCGGA---AAT-----------G-T-CTTATGTAA-ACT-TATATA--AAA-ACGTA------TAAGCTAC--GGAATT-TA---ATATAC-GCTAGA-TTATAT-AATATCAG-GTA-CTCAAAC-TGTC-TTTCTGAAAGGAA-G---A--TG---CATG---AAA-AAT-AA
gi|17 : ttttcttttttttgggggggggggggttgatttttaaaatattcatagtacaaagaataaataacatatatattcc-GATTTTGGTGATGA-AATAGTG--T--TAAAATG-T-G-ATG-AATCCACAGT--AT-GAGT-TTCGGC-ACTG-ATGTTTT-CCAGTC-TTGG-TTGTC-TATGGTGAAA--CAAGA--TGGAATATATAA-TCATTC-AGTTCAAAATATGTT----TTCTGTTCCCAGTAT-GTATAATA-CA-AATATC-GT-GTTTGGAAAT-AAAGTATTTATG-TTAAAACATGGCA-GCTCCAT-GGTGTGAAAAATAATT-GGCGA--CTTCTTTAGAATG-AGAATGGAAAaa
gi|18 : GA-TG-AT-AC-ATCAT--C-TTGCCCTTGATGGGAATC-TAAGTCACTTT--TTTAGC----T----TTAGAT-ACG-TTTAGAG-TTTTTTCTC-CA---AAGCTTT-CTGGTTT-TAAGGTA--AACTGTAC--CAAAACA-AA-AATTGTTTT-GGATCGGAT---C-AAAAAATTTC----A-G-ATCTGGT-CTTTTCA-TCAT-T-C---A--GATGGAA--ATTG--CT--GGG--CTCAAC-A--ACT-TTTAA-CTTAC-TAGGgt
gi|19 : gcgcG-TCTTTT-GTT-TATAAG-GTT-TTAAGGTTTCT----TTTTAATGTGGTA--CAAAT---ACGAT-A-ATTTTATAAAA--TTGGATGA-A-ATT-T-TAA-A-T----AAT--T-T-TAA-AG---CTTCTAT-TCTTCA-A-A----GTG-GCTTTTTAT-TAG-AA--GAATT----T--CAT-------TGA-T-GTCG-TC-----AGGG-AG-ACCCTGT---T-TCT--CCGTA--C----ATTT-------TTC-TTCTTTGTGC-A---GAAAT---TCTTG-CAATT-CT-C-AT-TAAA--CAAAAccaaaactaatataggtttttt
gi|2 : ATG-AAAA-AATAACAAAATCTTCCTAGAGTAGCCGATGG-TTACA--CAACAG-AATTC-TTCAATTTTTTTT---GGAATG--------------ATATTAA-AATATT-TA---TGT---TGTAAAG-AGCCATAAAT-TGTATTTTTGTAA-GAGG-AAACTT-CCCTACTTCACAAAGACTAGGAATTATTT-CT-TGTTTACCTAAAGGTGAC-AAGCCAAGAC---AGTTTT-ATAACAA--TTGGAGGCC-------AAT--TTACACT--T-TT--A---AAT-----------GGTACT-ATACAACAAT-TATATTCTGCG-TTGTCT---T--AG-CTACTCAGAATAAAA---AAA-AGTTTTGGAATTATTT-AATATATG-ATA-CACAGTC-TG-GGTTTTTG-AAGGAA-G---A--TT---AATATAGGGA-GAG-AATACTCGATTTATTT-ATGACATGTATG-C----ATTACACTGAAA-GGA------AAC---AATATCCAGG--T-CATCTAGTACTTC-AT--GATT-T-GAGAAGGCCTTTGA--CTC-A-TG-CATG--TCTTTC-ATT-TATAAG-GTG-TTATA--CTAT----TTTGGTTTTGG-G----GAA---ACTTT-A--TTCC---AAG--T-GGATAA-AGATT-T-TAA-A-CT--CAAA--T-TTCAG-AGG--CTTCAAT-TTTACA-G-A----GTG-GATTTTTAT-CAG-AA--CAGTT----CGACATAC--AAAAGA-G-GGGGTGTAGAC-AGGG-GG-ACCCTAT---T-GCCAGCCATATTT----ATTCATATTTATGC-T------GGC-C---GAAATA--TCTTG-CCAATAGT-TAAT-TAAG-ACAAAACAA-AGGTA-TATAAAG--G--ATAT-A-----TGT---AT---A-AA--A----------AAACACTGAAACA-TAAGGTTATC-ACAAT-ATATGCAGA-TGAAT-AC-TTCCCCAC-TAGCCCTTGATGGTTTCACAAtcatgat
gi|2 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataac--AATA-CTCCTAAAAACT-AA-AATTG-TTT-GATTTGGTTTG-CAAAAAAAAATTCTGAA-CCA---AGT-T-TTCCA-CCATTA-CCA-A--GATGGGA--AATAGATT--GGGTGATCAACAA--ACC-TTTAAT-TTAT-TAGGT-AT-T-AATGTCT-TTG---ATCG-A-------GAA---A-ATTGAA-GATTTT----AAATT--TTTGGA------CTC-CAAATT--CCT-AAAATTGTT---GCT-CTGATTAAAC-A-GTG-GAGGAG-A-GAATTC-A----AT-T--ACTCCT-ATT--GGTCGGGT-CACTG-TGATTTAA-----ACCT-TGCTTAT-TTGCCA-AAATTAAATC-ATT-TGT-TCATA-T--C-TGT--CGTTCCTAC--TCCT-AAA-AAGG-AGGACAATTTCAA-TATTT-ATG-CC-----AA------AATTT----TATTCG-AATTCTTG----TGG-AAGTCTAGTGT-AGATA-AAGTC---CAAG---AGGTCGTAATAAC-CCAA-GACATATCTTATCAGTG-----TATAAGATG--T--AGGTAT----AAACCAACTTTAATTATAT----CCCTGAAGA----TGCTCATG-GATTAAAAGGCTTACTAAGTCAGATTGTCATAAATTCTTGGATTA-ATA-TTTTtactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|20 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacGAAAGCTGG--CTTA-AAATGG--TTGGAGTG-----AAA--A-C-----GTGTATA---TTTTTAAAT----TA--CATATGATCA-AACGTTAACAA-CT--G---GTTACAAA-CCATGG-TTAGATA-TTTTCTTTG--ATCC-TGGCAACAA--GTGG-TAC-AAAATTTGTTA-GATTTTCGTGATGA-A----TATGT--TAAACTGGTAT-ATG-A--TCATAGT-----GA-TGCTTGGC-AA-G-ATGTTT--TCAGTGATgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|22 : CAGGGG-TG-ATCCTGT---T-GCG--CCATAT------ATTT-------TTC-TGCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAAA--CAAAACAA--AG-A-TATAAAA--G--GTATTG-----TG----AT---T-AATGA----------TAA----AGAACA-TAA-CTTATC-TCA---GCATGCTGA-CG-AC-AC-TTC----T-gtt
gi|23 : TGCCTAAAGGTGAT-AAACCAAGAC---AATTTT-TAAACAA-C-TGGCGTCC-------AATTACA---CT--T-TT--A---AAT-----------G-TAC-CATACAA-GTT-TATGTC--GGG-TTGTCCAAGTTT------C--AGAATTTAACAGGTCT-----TGGA-TTATAT-AATTTCTG-ATA-cttg
gi|25 : aATATGAAA-AATAACAAA-TCT-CCAGGT--AGT-GATGG-TTATA--GTGTTG-AATTT-TTAAA--TTTTTT---GGGGGT--------------AGATCTGAAAGAAATTA---TAT---T--AAAGTCAAT-TAATTGTATATTCTCCA-A-AAAG-GAGCTT-CCC-AT
gi|26 : aCTAGAGTAGGGG--ATGTACTA--ACT-TTCAA-CTTAT-TA-GC-AT-AGGA-ATTG-TCT---GTGG-A--GTAGAGAATAAATATAGTT-GATTT-----AAATT--AC-AAATGGAGGGTG-CAGATACGCCA-AAGAGTTAA---G
gi|27 : TTT--CCAGTCAT-GG-TTGTC-TATGGTGAAA--AA--A--TGG-ATA-ATAA-TCATTC-AGTCCAA----TTTATTATTTTTGTCCCA-ATATGGTATAATA-CA-AATCTCTGT-G-TTGGAAt
gi|3 : tTACTTC--GC-TTATTT-G-TATCGG-ATA-GTCAAGGGTT-G-TTTATA-AAGGTC-G---ACATA---CATT---GGAAGAGTAATGCAAG-TTTGTGA-A-GATCTCG-TGCT----CTTTCACTGAATTGGACC----AAT---A-CA--CAGG-GA-TA-TTTGAACT-C-A----GTT-GTGAAAAAGCTTTCGAGACTC-A-TATC-TGGATAGTTT-AT-CTATAAA-GTTCT-AAC--CTATCTACTTTGGATTTGG----------------------------AGA--T-GGTGTA-AAATT-TGTAA-A--A--CAAA--C-CATAG-AGGAACATCTGTACTTACA-A-A----GCGTATTTCCTTT-CAT-AA--CACATATTGCATTATAC--CAGAG--G-GTTG--CAGACAAGGA-GT-ATCCTATGACTAGCGA-CCATTTTT----GTTA-------TTC-A------TGG-C---AGAATGTATCTAG-CTATTTCT-TG---CAAGCGCAAA-TAA--AG-A-TATTAAG--GTGATA--------TGT---AT---G-AATGA----------TGC----GGAGCAACAA-AATCTC-TCA---ATATGCAGATCT-ACCAC-ATT----T-TGGCTCTTGATGGTTCCCCAAAATC--TCT--TTTTGCGTTATGCTCTT--AT-ACA--TT-AACACTTTTACTC-TA---C--TTTTTCTGGATT--CAAATA--AATAGCTC--CAAAA-A-AA-AATAG-TTT-GGATAGGCTT--CTAAAACATTT-CTAA--G-A---AGT-A-TATCA-CCAT-A-C-ACA--ATAGGAAATGCTGGAGT--GGG--ATGTACTT---CT-TTCAAGCTTAT-TAGGGCATTG-GA-ATTT-CTT---GCCG-A--G---AGAATAAA-AT-GCAAGCTTTTTTCTAAATT--AC-AAT------ATTTCAGATA--CCA-AAAAATAAA---GCTTATGATACA-----GTT-GAATAGAAAGAA----A----ACTC--ACTC-TCATT---GTCGG-CGCACAG-TTGC-CAAAA----CAC-TACTTTT-A--CCT-AAGCTTAATCCATC-TTTGTTAT--G--C-ACT-----GCCAAA--TTCA-AGATAAAG-AATA--------A-TGTCT--TC-TCT---TGAAT----AGTTT----TTTT-----TTTATTACTATGG-A-ATTCAAGATT-GACA-GGGT---TCAAG-ACAAACTGT--TACT-CCAA-GATTCACTTGAAAAGTGG--CTTA-AAAATGGTT--GAGTG-----AAA--AAC-----TTC--------CTTTAAAGACTGTA--CATGTGATAAGAACGTTAACAAACT--GATC---ACAAA-CCATGG-TTAGATA-TTTTCTTTTAAATCCATGGCAACAAT-GTGGCTACAAAA--TTTTTGCGATTT-GGTGATGA-A----TA--TCTTAAAATGGT-TTATG-A--TCACAGT--AATGAGT-TTTGGCCAT-G-ATGTTTTTCCAGTCATGGG-TTGTCGTATGGTGAAAAACA--A--TGG-ATA-ATAATTCATTC-AGTTCAAAAGATTTA-----TCTGTTCC--GTATCGTATAATA-CA-AATATCTGTCG-TTGGAAATAAAAA-GCTTATGTTTAAAACATGACATGCT-CAT-GGT-TG-AAAATAATTTGGCGAA-CTTTTTTAG-ATGAAGA-TGTAAA
gi|30 : -GAAA-AATAACAAA-TTT-CCGGGA--AGT-GATGG-TTTTA--CAGTTG-AATTT-g
gi|4 : atAAAAA-CCTG-CGTCCCCAATACACT--TT---CT--T-TT--ACTGAAT-----------G-T-CTTGTATAA-ACT-TATATC--AGG-ATGTAT------AAGCAAC--AGAATTACA----TCTACCACTAGA-TTATT--AATATCAGCGTAGCTCAAAC-TG-GCTTTCTG-AAAGCTGA---A--TGATACATA---GGA-GAA-AACACTAG-TTTATTT-ATGATCTTGATG-TTTTTCTTTCACAGAAA---GCT----AACCAAA-T-TCCAGG-AT-TA-CTAGTACT-T-TTTGGATTCTTGAAAAGGCTTTTGA--TTC-AATTTCTTGG-TCCTTTTATT-TACAAACGTT-TTAAA--ATAT----TTTTGGTTTG-----CGGATCATACTGT----TT-----ACGATT-GGATTA-GAATT-C-TGA-A-CA--CAAATTC-T-CAACAG---CTTCGGT-TCTACATA-G----GTG-CGTTTCTATTCTGCAA--CAGTT----CAAAATGTTGAACGTC-G-GT-G-GCAGACAACGGCGGCATCCTGT---TTGTCA-CCATATAT----TTTC-------TCC-T------TGTGCTTAGCAAT----CTGG-CT-CT-CTCTGATGCAAA--CAAAACAA--AG-ACTATAAAATTG--CTA--TCTTGTTGC---AT---T-AACGATTTTTCTTTTAAA----CGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AC-AC-TTCCTC-T-TCTCCTTCGAATGTACTCCTAAGTC--TTTA-TTCCGC----TGCCCTTCGATTACCTATT-GAT-TTTTTTCTC-AA---AA-TTCT-CAGGACT-CCAAATA--AATACTTC--AAAAACTTAA-AATTA-TCTCGGATTG-AT---CAAAAAAATTCTCGGCATG-A---AGTCA-TTTCATCCAT-TTC-G-ACCGATGGAA--GCTGGATT--GGGG-ATGCACTG--ACT-TCTCAT-TTATATAGGA-AT-A-CA--TTT-TCGAGGGTAG-ACATT--A--ACAAA--TTACG-AACT------AAATT--AT-GGA------ATT-CAGATA--CCA-AAAATAAAA---GCT-ATGATACAAC-A-GTGCGAGAAGAA-GCC----G----AT-CTAACAC--CAATA-GGTCGGTGTAACAGCTTGTT---AAG--ACAC-TACTTGTCC--CCA-AAACTCAATC-ACC-TTT-TTAT--T--CTCCT--C-TACCAAA--CCCTAAAA-AAAG-AG----------ACTATTT--TCATCA--TTAAGTAAAGAGTTA----TTTC---AATTCATT----TGA-ATGCCTAACATCAGATA-AAGTCAAACAAGAACAA-CTGT--TA---CCAACGACCTATTTGAAAAGGGGGTCTCT-AAAATG--
gi|5 : AGATGGGTGGAGGAGAGCGAGAAATCCACTAAATATTTCTGTAACCTAGAATCTAGAAACACTCCTTAA--AAACAATCAAAAAAGGGTTAAAACTATCGAAAAGGTAATG-ATTGATACTCATTCGGA-CATgtgcgttcgattatttactaaatttattatttctcttgaaatgttcatggata
gi|5 : cacgatcaAACGTGAAATTTGT---TAGCGTTA-AAGAATATGAAA-AACAACAAA-TCAACCGGGA--AA--GATGG-ATTTA--CAGCAG-AATTT-TACAAGTTCGTTT---GGAATGAAGCTATTTATTAAAGATGTA-AAGATC-TA---TATTACA--AAAG-CACT-TCA-T-CATATATTTCAGT-GTAT-ACATTTGCCA-GCATCACAAAGACT-TGAGATTAT-ACTATGTTAACACAAGGGAGAT-AAAGC-AGAG---AGTGTT---AAAAA---TGGCGACC-------AATAACT---CT--T-TTA-A---AATATTTCTGCACGG-TGCTTTTAACA-AAT-TATAgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggtgaacgtgaaatttgttagcgttaaagaatatgaaaaacaacaaatcaaccgggaaagatggatttacagcagaattttacaagttcgtttggaatgaagctatttattaaagatgtaaagatctatattacaaaagcacttcatcatatatttcagtgtatacatttgccagcatcacaaagacttgagattatactatgttaacacaagggagataaagcagagagtgttaaaaatggcgaccaataactcttttaaaatatttctgcacggtgcttttaacaaattatacttctttctatctggtctt
gi|6 : cacgatcaagatgggtggaggagagcgagaaatccactaaatatttctgtaacctagaatctagaaacactccttaaaaacaatcaaaaaagggttaaaactatcgaaaaggtaatgattgatactcattcggacatgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggtgT-CT-TGAT-CAAA--CAAAACAA--AG-A-CATAAAA--G--GTATTG-----TG----AT---T-AACGA----------TAA------AATA-TAA-ACAATC-TCA---GTATGCTGA-CG-AC-AC-TTC----TCTTGCTCTTGATGGTACTCTTAAGTC--CTT--ATTCGC----TGCCCTT-GAT-ACT-ATT-GAT-TTTTT-CTCAAA---A--TTCT-CAGGACTAAAAAATA--AATATTTC--AAAAACT-AA-AATTA-TCT-GGATTGAATAAAAAAAAAAAATCTCGGAT-G-A---AGT-A-TTTCA-TCAT-T-C-G-A--GATGGAA--GCTGGACTG-GGG--ATGCGCTG--A-T-TTCAATC-TAT-TAGGA-AT-A-TA-TTTT-TCG---GTAGAA--TT--AG-ACAAA-ATTATG-GAACT-----AAAGT--AT-GGA------ATT-CAGATA--CCA-AAAAGAAAA---GAT-GTGATACAAC-A-GTG-GAGAAGAA-GGATTCTA----A--C--AC----CAATA-GGTCGGGT-AACAG-TTGTT---AAG--ACAC-TACTTAT-C--CCA-AAACTTAATC-ACC-TTT-TTAT--T----TCT--C-TACCAAA--CCCT-AAA-AAAG-AGA---------A-TATTTCATC-ATTAAGTAAAG----AGTTT----TTTC---AATTCATC----TGGAATGCTGA--ATCAGATA-AAGTCAA--AAGAACAA-CTG-------------AGATTATTTGAAAGGGGGT-CTTA-AAActtctttctatctggtctt
gi|7 : AATGGAATGCGGAAA---A-T-TCCACG-TC-TT-CTAGT-TT-A-AT-TGATT-TTGAGAAGGCTTTTAA--CT---------TGG-TCCTTC-A-GATATAAA-GCTTTCAAG---TAA----TTTGGTTTCGG-A--T-AAT---ATT-T-C-ATT-----CAA--T-AGATAAGATATT-T-TAAGA-CA--CAGA--TAT-CAG-AG---CTTTCAT-TTTACA-AGA----GTA-GAGTTTTAT-CAG-CA--TAGTT----AGATATAC--AA---ATG-GTAT-GTAGA-AA-----------------T-GC-A-CCATATTT----ATTT-------CTCATATG---TGC-T---GGAAT---TC--------------------AA-ACAAAACAA--AA-A-TATAAAA--G--ACAT-A-----TGTTCAGT---GTATTGA----------AAACAC-AGAACA-TGA-TATATCGCCATATATATGCAGA-AT-AT-AC-TTCA---G-TAGCTCTTCATGGTTTAACTGCATC--CCTGGTATTGG----TG--TTT-GAT-ACA-ATA-GAA-TTTTT--TG-TACAGT--TTTT-CTGGTCT-AAAGATT--AAT-TCTT--CTACACG-AATAGTGG-TCT-GGATTGATT---AAAAAAAA--TTCAGAA-C-C---AGT-T-TTTCA-TCAT-A-G-A-A--GATGGAA--ATTGGATT--GAG--G-GTTCTT--AAT-ATCTAACTTAT-TGGAT-AT-T-CA-AATT-TCT---GTTG-A--tggt
gi|8 : cAGG-AT-TA-CTTGTGCA-C-AT-AGAAT-TTGAAAAAGCTTTCGA--CTCCA-TATCTTGG-AAGTTT-AT-CTAGAAA-GTACTTAA---TTAC----TTTGGATTTGG-G----GAT---AATAT-A-ATT-----ACA--T-GGGTTA-AAATT-T-TAA-A-TA--CAAA--C-AATAA-AG---CATCTGT-ATTACA-A-ATTAAGCG-GTTTCCTTT-CAG-AA--CAAAT----TGAGATAC--A-GAGA-G-GTTG--CAGACAAGGA-G--ACCCTAT---C-GC-A-CCATATTT----ATTTA------TCC-TATG---TGC-A---GAAAT---TCTAG-CTATT-CT-TG-T-CAA--GCAAAATAA--AG-A-TATTAAA--GGTATA--A-----TG----AT---G-AATGA----------TGA----AGAGCA-CAA-AATCTC-CCA---ATATGCAGA-CG-AC-ACATTT----T-TGGCTCTAGGTGGTTCCCAAAAATC--TCT--TTTTGC----TGCTCCT-GAT-ACA-AT--AAA-TTATTACTT-TA---T--TTTTTCTGGATT-ACAAATA--AATAGCTC--AAAAACA-AA-AATAG-TTT-GGACAGGCT---CTAAAACATTTCCTAAA-G-A---AGT-A-TATCA-CCAT-A-C-A-A--GATGGAA--
gi|9 : AA-ATTGAA-GATAT-----AAATTTTA--GGA------ACT-CAAATT--CCTTAAAATTGTT---TCT-CTCATTGAACGA-GTG-GAAGAGAA-GAA----ATTCTAT-T--A-TCCTTACTCTGGTCGGGTACACTG-TGATT---AAA--ACACTTGCTTAT-T--CCA-AAATTAAATC-ATTGTGT-TCATAAT--C-TCTTGC-TACT-----CCTT-ATA-AAAGTAC----------A-TATc
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|21 ): CATCTCATTTTGGATGATACAAGGAAAGAATATGGAAGAGATTGCAAGATTCATTTCTGATTCAGAATTATAATAACTGGACTTTTAGTATTATTTGATTTGGAGGAAGCCTTTGATTCTATTCCTGGTCATATATTTATGAAGTACATGTATAAGAATTGTTTGGATTTGGAGAAAGTACGACGTCTTATTTACGGAGTAAAGAT
Unaligned ( gi|24 ): GCTTACTAATCAGAATGTCATAAATCTTGGGATTAATATTTTTTTTGCTGTGTATGGAAATGATATTCTTATGAAGTTATTATGATTTTGGAGATAGTTTTTATGATCAGAAGATGTTTCTTAAGGAAAAAA
Unaligned ( gi|28 ): TCCCTACTTCCAAACGGGATACAATTTCATACTTATAAATTCAAAATTTTATTTCGATTCTTACGGAAATCTAATAGTTTATGGTAACACAAGACTATCTATC
Unaligned ( gi|29 ): CTTGAGCAGAAAGAAATGAAAAGTGGTCTATTTCATGCCATGCTTTGGATG
Alignments
lowQualScore : 1 22 1 11 444444 4444444 11 222 1 1 222 555555 222 4444 1 1111111 11111 2222222 11 1111 1 11 111 44444444444444 11 11 111 222222 111 111 111 11 333333333333333333 11 1 111 3333 1111111 2222 2222222222 1111 11 2222222222 1 2222222222222222 1111 222222222 1 1 222 55555555555555555555555555555 22222222 111 3333333333333333333 11111111 111111 444444444444444444 11111 111 2222222222222 22222 111111111 333333333333333333 111 222222 11 1111 1 1 222222 1 11 1111 11 11111 111 11 1111 1111 33333333333333 11111 11111 22222222 11 111 444444444444444444444444444 11 11111111 111111 22222222222222 11 5555555555555555555555555555 1111 2222 11111 11 3333 1111 22222222 11 11111 33333 11 3333333333 222222 11 1 2222222 1 1 1 111 2222222 11 1111 1 111 222 2222222222 11 1 1111 222 1 1 11 1 1 1 11 22 1 1 1 1 11111111 33333 22 1 1 1 1 1 111 1 11 1 1 1 1 1 1 2 1
lowQualScore : 2 1 00 111 3 11 7 88 1 1 000000 7 5555555 88 222 1 1 5 1 1 1 5 111 777777 3 111 2222 4 6 0 0 2222222 99999 2222222 6 6 22 2 999999 6 2222 6 3 1 00 444 77777777777777 8 00 11 22 444 666666 99 1 8 444 777777 6 6 77 1 8 8 0 6 6 8 3 1 88 6 000 000 99 5 0 555555555555555555 11 66 888 5 4 3 5 5 66 222 0000 2 0 66 7777777 111 2 5 5 1 4 5 5 1 6 3333 1 5 3333333333 5 0000 5 00 4 5 1 5 1 5555555555 1 2 0 9999999999999999 1111 4 0 777777777 4 1 55 4 6 4 7 0 3 3 1 333 3 66666 7777 666 77777 1 00000000000000000000000000000 7 1 3 2 3 7 3 88888 33333333 111 1 4 4 4 8888 1 1 55 55 4 55 777 4 1 1 4444444444444444444 0 6 3 3 7 3 3 77777777 000000 999999999999999999 00000 000 2 0000000000000 3 3 3 3 55 55 4 55 3 00000 888888888 66 4 555555555555555555 4 4 1 4 333 1 4 4 4 88888 222222 1 1 11 1 11 0000 0 5 5 5 55 66 2 66 444444 0 0 0 44 5 66 777 9 66 55 4 1 4 4 1 1 00 1 2222 11 777 99 4 4 777 66 4 66 1 00 44444 222 4 4 33 4 66 3333 66 5 6666 1 44444444444444 5 22222 44 77777 11111111 66 5 2 66 00 5 000 66 7777 555 5 1 1 5 555555555555555555555555555 66 88 5 1 5 77777777 66 888888 5 1 5 6 1 6 99999999999999 3 99 00 1 6 6 2222222222222222222222222222 66 7777 5555 88888 8 99 1 77 77 8 2222 5555 3 55555555 8 8 44 2 55 6 55555 66666 33 3333333333 777777 33 0 1 88 3 3333333 0 0 0 0 2 0 777 4444444 2 00 7777 0 7 111 0 444 0 8888888888 11 8 0 4444 777 0 0 44 0 88 0 9 0 0 33 77 0 0 0 3 0 33333333 55555 33 2 3 0 0 1 5 0 0 000 3 44 3 3 6 3 3 6 3 2 6 4 3
lowQualScore : . . .. ... . .. . .. . . ...... . ....... .. ... . . . . . . . ... ...... . ... .... . . . . ....... ..... ....... . . .. . ...... . .... . . . .. ... .............. . .. .. .. ... ...... .. . . ... ...... . . .. . . . . . . . . . .. . ... ... .. . . .................. .. .. ... . . . . . .. ... .... . . .. ....... ... . . . . . . . . . .... . . .......... . .... . .. . . . . . .......... . . . ................ .... . . ......... . . .. . . . . . . . . ... . ..... .... ... ..... . ............................. . . . . . . . ..... ........ ... . . . . .... . . .. .. . .. ... . . . ................... . . . . . . . ........ ...... .................. ..... ... . ............. . . . . .. .. . .. . ..... ......... .. . .................. . . . . ... . . . . ..... ...... . . .. . .. .... . . . . .. .. . .. ...... . . . .. . .. ... . .. .. . . . . . . .. . .... .. ... .. . . ... .. . .. . .. ..... ... . . .. . .. .... .. . .... . .............. . ..... .. ..... ........ .. . . .. .. . ... .. .... ... . . . . ........................... .. .. . . . ........ .. ...... . . . . . . .............. . .. .. . . . ............................ .. .... .... ..... . .. . .. .. . .... .... . ........ . . .. . .. . ..... ..... .. .......... ...... .. . . .. . ....... . . . . . . ... ....... . .. .... . . ... . ... . .......... .. . . .... ... . . .. . .. . . . . .. .. . . . . . ........ ..... .. . . . . . . . . ... . .. . . . . . . . . . . .
lowQualScore : 0 0 00 333 3 77 3 33 0 0 333333 3 7777777 00 000 0 0 5 0 0 0 5 000 555555 0 000 5555 0 7 0 8 5555555 55555 7777777 7 7 00 2 555555 7 2222 7 3 0 66 000 00000000000000 8 22 00 44 000 000000 44 0 0 888 111111 7 7 77 0 0 0 8 0 0 0 7 0 00 6 000 444 66 0 5 444444444444444444 99 99 888 0 8 9 0 0 99 222 4444 5 5 99 6666666 888 8 0 7 7 0 7 7 0 7 3333 0 0 8888888888 9 0000 0 99 0 0 0 0 4 0000000000 0 5 0 7777777777777777 0000 0 3 666666666 0 2 55 0 0 0 3 8 6 6 0 777 6 55555 1111 999 66666 0 99999999999999999999999999999 3 0 6 6 6 3 6 55555 44444444 000 0 0 0 0 5555 2 0 55 11 0 55 000 0 4 4 3333333333333333333 8 5 6 6 4 6 6 44444444 333333 555555555555555555 55555 000 3 5555555555555 3 3 3 3 00 55 0 55 5 66666 333333333 33 4 666666666666666666 4 4 0 4 999 0 0 0 0 77777 444444 0 0 11 2 99 6666 0 0 0 9 44 00 4 33 666666 0 8 8 44 0 11 888 7 11 88 4 0 4 4 0 0 66 0 7777 99 222 99 4 4 111 11 4 11 0 66 44444 666 4 4 00 4 00 2222 99 0 4444 0 66666666666666 0 11111 99 55555 00000000 99 0 2 99 55 0 000 77 7777 999 7 0 7 7 111111111111111111111111111 44 00 7 6 7 00000000 11 333333 7 0 7 7 0 7 55555555555555 5 22 22 8 7 7 1111111111111111111111111111 22 0000 8888 00000 0 22 0 66 00 0 2222 0000 8 00000000 0 0 66 5 88 7 88888 88888 88 2222222222 555555 88 5 0 00 2 0000000 8 2 0 0 5 0 555 8888888 5 22 2222 0 0 000 2 000 8 2222222222 00 0 0 8888 000 0 0 22 0 88 8 2 0 0 88 55 0 0 0 2 0 88888888 55555 88 5 2 0 0 0 5 0 0 000 3 00 3 3 7 3 3 7 3 0 7 7 3
consensus : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAAT--CTAGNAAC--TCCTTAATTAAACAA------TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TA-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC-------AAT--C-T---CTT--TT--A---AATG-TACTTATACAA-ACT-TATATC--GGG-NTGTCTTT-AGCTAC--AGAATTAAA---ATCTACTTCTNGA-TTATTT-AATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--GA--G---ATACATA---GGA-GAG-AATACNAGATTTATNT-ATGATCTCGATG----TCTTACACTGAAATGGACT----AAT---A-T-TCCAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-T-CNTTTATTCTATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGG-G---GA--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAA-GG-GGGACCCTG-TTG-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGTATA----TGT---A----TG-AACGA----------NAA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-T---TC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GA-TA-CNATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACTANAAA-TA--AA---TANCTC--AAAAAC-AAA-AATNGT-TT-GGATNGGNT--CNAAAAAAT---TTTCNGAA-G-AAGT-NTTTCA-CCA-TN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--A-TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTACACAG-TTG-TTAAAAG--ACACT-GCTTA--T-NCCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCNCTAAGTAAANAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTT---TTAT---ATCTTTAAA----G-TA--CATGCGATNAAAANGTTAACAAACT--GATCGTTACAAA-CCATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-G-TGG-TACGAAA-T-TGTTG-GATTTTGGTGATGA-A----TAT-TT--AAAATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-GTGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCG-TTCTGTCCC--GTATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
Reference ( family-2981 ) : NNNNNNAGATGGGTGGAGGAGAGNGAG-AAACCCANTAAATATTTCTGT-GNCCTAGAAT--CTNGNAACACTCCTTAATTAAACAA------TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAG------TTCAAAATTCTCTGGA----TAAAGTAATCTG-AAAGTGAAATTTT-TACAGCGT--TN-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAANTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC-------ANT--N-T---CTT--TT--A---AATG-TGCTTATACAA-ACT-TATATC--GGG-NTGTCTTTTAGCTAC--AGAATTAAA---ATCTACTTCTNGA-TTATTT-AATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--GA--G---ATNCATA---GGA-GAN-AATACTAGATTTATNT-ATGATCTCGATG----TCTTNCACTGAAATGGACT----AAT---A-TATCCAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-T-CNTTTATTCTATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGG-G--CGA--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAA-GG-GGGACCCTG-TTG-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GATATA----TGT---A----TG-AACGA----------NAA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-T---TC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GA-TA-CNATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACTANAAA-TA--AA---TANCTC--AAAAAC-AAA-AATNGT-TT-GGATNGGNT--CNAAAAAAT---TTTCNGAA-G-AAGT-NTTTCA-CCA-TN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--A-TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTNCACAG-TTG-TTAAAAG--ACACT-GCTTA--T-NCCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCTCT---TAAATAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTT---NTAT---ATCTTTAAA----G-TA--CATGCGATNAAAANGTTAACAAACT--GATCGTTACAAA-CCATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-G-TGG-TACAAAA-T-TGTTG-GATTTTGGTGATGA-A----TA--TT--AAAATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA--TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCG-TTCTGTCCC--GTATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGAAGA-TGGAAA
gi|1 : AAATGGGTGGAAGA-AGGGA--AAACCTAGTAAATATTTCTGT-GCTTTAGA-T--CTCGTAAT--TTTTTAATTAAATA-------TCAAAAAAGG--TAAAAC-A-CAAGAAGTCGAGGTATTTATAACCAGTTGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAG------TTCAAAATTCTCTGGA----TAAAGTAATCTGAAAAGTGAAATTTT-TACAA-GT--CT-GAAAAAA-G-----AAA-AATTACAAA-TCCACCAGGA--A-T-GATGG-ATTCA--T-GTTG-AGTTTCTTTAAG-TTTTTT---GGAAGG--------------A-ATC--AA--GAAATA---TGT---A--GAAG-TGTT-TAATT-CAAATTTTTAAGA-AAAG-GAGCTT-CCA-ATATCACAAAGACT-GGA-TTTAATCACT-TGTTTGCCAAAAGGTGA--AAACCTAGAC---AATTTC-TGAAAAATTT-GGCGTCC-------ATT--C-T---CTT--TT--A---AATG-TGCTT-TGAAA-ACT-TATATC--GGGCCTGTCTTTTA-CTAC--AGAATTAAA---ATCTACTTCTTGA-TTATTT-GATATCGG-ATT-GTCAATC-T--G-TTTATA-AAGG--GT--A---AT-CATA---GTA-GAT-AACA--AGATTTGTGT-ATGATCTCAATG-----CTTTCACT-AATTGGACT----AAT---A-CATCCAGGA-TACA-CTTGTGCT-CTA--TA-GATT-TTGAAAAAGCTTTCGA--CT-C-A-TATC-TGG-A-AGTTTATTCTATAAA-GT---TCTTA----AA--C-------CTTGTATTTGG-G--CGA--ATATTATAAATT-----A--CAT-GGGTTA-AAATT-TCTAA-A-TATTCAAAC--A-T---AAAG---CATCTGT-ATTACA-A-A----GCGGTTCC--TTT-CCAG-AAAGCA---AAT-TGATATAC--AAGAGA-GCGTTG-GCAGAC-A-GG-AGAACCCTA-TCG-C-----AATCCATA-TT----ATTT-------TCC-T------TGT-C---GAAAT---TCTAGTCTATT-CT-TG-T-CAA-AGCA-AAATAATGAG--A-TATTATG--GATA-A----TG----A----TG-AATGAG---------GAA----GGAGCA-CAA-AATCTC-CCA---ATAT-CAGA-CG-AC-AC-T---TT----T-TGGCTCTGGATGGTTCCCCAAAATCTCT--TTTTGC----TGCTCTT-GA--A-CAAGT-AAA-TTATCACTC-TA---C--TTTT-CTGGATTACAAA-TAGGAA---TA-CTC--AAAAAC-AAA-AATAGT-TT-GGATAGGCT--CTAAAAAAT---TTTCTAAA-G-GAGT-A-TACA-CCA-TA--CAA--AGC--AAA--GCTAGAGT--GGG--AT-TACT---ACTAT-CCAATCTTAT-TAGGC-AT-A-GAAT--TT-TC----GTGG--A-TA--TGAA-AAA-ATAGTG-GATTA-----AAAAT--AC----AAT--ATT-CA-ATA--CC--AA-AATTAAA---GCTT-TGATAC-AC-ATCTG-GAATAGAA-GAA----A----AC-C--ACTCCTCATT---GTCGA-GTCCACAG-TTGCTCAAAAGACACACT-GCTT---T-ACCGTAAGCTTAATC-ATT-TGT-TTAT--TGGC-ACT--A-TACCAAAATTCC------AGAG-AG----------A-TACTT--GTCTCTC--TGAATAGTTTGTTCTTTTTCGAATTTATA----TGG-AT-TCAAAGATT-GACATAGGTT--ATAAAGACAAAC-GT--TACTGGCAA-GAACCGACTT--AAAGTGG--CTTA-AAAATG--T--GAGTGTTGATAAA--ACTTT---TTATAGCATCTTTAAA----G-TA--CATGCGATAAAAGGGTTAACAAACT--G-TCATTCAAAA-CCATGG-TTAGATATTTTT---CTTTGAAAT-AAT-GCATA-AATGG-TGG-TAC-AAA-T-TGTT--GATTTTGGTGATGATA----TA--TT--TAAATGG-T-TATGAA--TCACAGTA--AAGATTTTGG-CAT-GAATG--TTTCCAGTCATTGGTTTGTC-TCCTTTA--AAACAATGTGGA-TA-AAAA-TC--TCAAGTTC--AAT-T-TTATCG-TTCTGTCCC--ATATGGT-TAATATCATAATCTC-GT-GTT-GGAAATAAGAGTATTTATG-TTAAAAAATGGCAT-CT-CATGGGTGTG-AAAATAA-TT-GCG-ACTT-TTTAGTATGATGATTGGAAA
gi|10 : cgggctGGTGATTAAACCTAAAC---AATTTT-TTAAAAAACT-GGTGACCG------ATT--A-C---ATTG-TT--A---AATG-T-CTTATATAA-ACT-TATTTC--AGG-TTGTCTT--AGTAAA--AGAATCAAA----TCTACTT-TAGG-TCATCTCAAT-TCAG-ACA-CCCAGTC-TG-GATTCATG-AAGG--GAA-G---ATATATT---GGT-AAA-AATACCAGATTTATCT-ATGATCT-AATG----CATTATACAGAAA-GTAAT----AAT---A-T-TCCAGGA-C-TA-TTGGTATT-G-A--TA-GACT-TTGAAAAGGCTTTTGA--TTCC-A-TTTCATGG-T-CATTTA-TATATAAA-GT---A-TTG----AA--ATAT----TTTGGATTT-G-G--TGA--ATAC-AT-TATT-----G--AAT-GGGTAA-AGATTCT-TAA-
gi|11 : gttacacaacaacttaaatactcTCTG-AAAGTGAAATGTTGTACAGTCT--TGTAAGGATA-G-----GATTAATAACAAA-TACACCAGGA--AGT-GATAGATTTCAACTATTTGGAATTTGTTAAAGTTTTTTTTTTG--AGG--------------ACATCAGAA--GAATTAATTTGT---G--AACG-TGGT-TAAT--CACATTTT-AAGATAAAGAGAGCTT-CCA-ATCTCACAAAGACG-GGG-AT--ATCACT-TGTTT-CCAAAAGGTGAT-GAACCTCGAT---AATTTTCTGAAACATTTTGGCGTCC-------AAT--TAT---CTTCTTT--A---AATG-TGCTTGTACAA-ACTATATAGC--GG--ATGTCTT--AGCTAC--AGAATACAA---ATCTACTCCTTAT-CTATT
gi|12 : TG-AAGG--GA--AGATATCTATA---GGG-GA---ATACTCGATTTATTTTATGAGATT-ATG----TCATACACTGAAAGAAACA----GAT---A-T-TCCAGGTCT-TC-TTAGTACT-C-A--T--GATT-TTGAGAAGGCCTTTGA--CT-C-AATGTCATGG-T-CTTTCATT--ATAAA-GT---T-TTA----AA--CTAT----TTTGGTTTTGG-G----A--AAACTTT-A-TT-----C--AAT-GGATAA-AGATT-T-TAA-A-TT--CAATT--T-C---AGAG---CTTCAAT-TTTAC--A-A----GTGGATTT--TTA-TCAG-AA--CA---GTT-CGACATA-----------------AC---CAA-AG-GGGTCCCTA-TTA-C-----A--CCATATTTATTCATTT-------TAT-G------TAC-C---GAAAT---TCTTG---------------------------CAA--AG--A-TATAAAG--GGTATA----TGT---A----TA-Agatacgat
gi|13 : TTT-CAGGTCTAAGGA-TA--AA---TTTTTC--AAAGAC-AAA-AATGGT-GT-GGATAGGTA--GTAAAACAT---TTTCAAAG-G-AGGT-TTTCCA-TCA-TT--CAA--GGT-GGAA--ATTTGACT--GGA--A--CAATGAAACA-T-TGGAT-TTAC-TAGGG-AT-A-AGAT--TCAAC---AGTAA--C-TT--ACAA-GAA-ATGGTT-GAAAT-----GAATT--AT----AAG--ACT-AAATTA--AAG-GA-AATTAAAAAGGTTA-TGAT---GC-A-GTG-GAATAGTA-GAA----A----TCGT--ACTCCT--TTA-GGAAGG-CTA-ACAG-TAA-T--AAAG--ACA-------------CCA-AAATTGAATC-AC
gi|14 : agttctccaacttctatggatgacattattagagtcctagattacttggcaataa---T-CTA----AA--ATAT----TTTGGTTTCGG-G---GA--TTA-TAT-G-TT-----A--GATTGGATTA-AGATT-C-TAA-A-TA--CATAT--TTC---AAAG---CTTCGGT-TCTACA-A-G----GTGGTTTC--CTA-TCTG-AA--CA---GTT-CAATAT-T--GAACGT-G-GTTG--CAGACAA-GG-GG-ATACTG-TTG-C-----A--CCATAT------ATTT-------TTC-TCCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAA-A-CA-AAACAA--AT--A-TATAAAA--GGTAT-----TGT---AATTTTA-AACGA----------TAA----AGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AT-AC-C---TC----TCTTGCTCTTGATGGTACTCCTAAGTCATT--ATTCGC----TGCCCTT-GA-TA-CTATT-GAT-TTTT
gi|15 : TTTATGT-ATGACATT-ATG----TCATACACTGAAATAAAC-----AAT---A-T-TCCAGGT-C-TT-CTAGTACT-C-AT-T--GATT-TTGAGAAGGCCTTTGA--CT-CAA-TGTCATGG-T-CTTTCA-TCTATAAA-GT---T-TTA----AA--CTAT----TTTGGTTTTGG-GAACAA--A-A--AT--ATT-----C--AAT-GGATAA-GGATT-T-TAA-ATTC--CAATT--T-C---AGAG---CTCCGAT-TTTACA-A-A----ATGGATTT--TTA-TCTG-AA--CA---GTC-CAACATAC--AA-AGA-G-GGT--GTAGAC-A-GG-GGGACCATG-TT--------------TATTC----ATAT-------AAT-G------TGC-C---GAGAT---TCTTG-C-AAT-AT-TAAT-TAA-A-CA-AAACAA--
gi|16 : -AAAG-GAGCTC-ACT-ATTTCATAAAGATT-AGG-AATAATCTCA-TGTTTGCCAAAAAGTGAC-AGACACGGACACAAAATTT-TGGAAAAC-T-GATGTCC-------TAT--A-A---CAT--TCGGA---AATG-T-CTTATGTAA-ACT-TATATA--AAA-ACGTA--TAAGCTAC--GGAATT-TA---ATATAC-GCTAGA-TTATAT-AATATCAG-GTA-CTCAAAC-TGTC-TTTCTGAAAGG--AA--G---ATGCATG---AAA-AAT-AA
gi|17 : ttttcttttttttgggggggggggggttgatttttaaaatattcatagtacaaagaataaataacatatatattcc-GATTTTGGTGATGA-AATAGTG--TT--AAAATG--T-GATG-AATCCACAGTAT-GAG-TTTCGG-CACTG-ATG-TTTTCCAGTC-TTGG-TTGTC-TATGGTG--AAACAAGATGGAATATATAA-TCATTC-AGTTCAAAATATGTT-----TTCTGTTCCCAGTATG-TATAATA-CA-AATATC-GT-GTTTGGAAATAAA-GTATTTATG-TTAAAACATGGCA-GCTCCAT-GGTGTGAAAAATAA-TTGGCG-ACTTCTTTAGAATGAGAA-TGGAAAaa
gi|18 : GA-TG-AT-AC-A---TCAT--C-TTGCCCTTGATGGGAATC-TAAGTCACT--TTTT------TAGCTTTAGA-TA-CGTTTAGAG-TTTTTTCTC-CA---AAGCTTT-CTGGTTTTAAGG-TA--AACTGTACC-----AAAAC-AAA-AATTGT-TTTGGATCGGAT--CAAAAAA-----TTTCAGAT-C-TGGTCTTTTCA-TCA-TT--C-A--GAT-GGAA--ATTG--CT--GGG--CT-CAACA--ACT-T-TTAA-CTTAC-TAGGgt
gi|19 : gcgcG-T-CTTTTGTT-TATAAG-GT---T-TTA----AGGTTTCT----TTTTAATGTGGTA--CAA--ATACGAT-AATTTTATAA--AATTGGATGA-A-ATT-T-TAA-A-TA----ATT--T-T---AAAG---CTTCTAT-TCTTCA-A-A----GTGGCTTT--TTA-TTAG-AA--GA---ATT-T--CAT-------TGA-T-GTCG-TC-----A-GG-GAGACCCTG-TTT-C-----T--CCGTA--C----ATTT-------TTC-TTCTTTGTGC-A---GAAAT---TCTTG-CAATT-CT-C-AT-TAA-A-CA-AAAccaaaactaatataggtttttt
gi|2 : TGGATAGGGGAAGGGGAGGAAACCTTCGAAGTACTTTTGTAGGTCTCGAATTTCTAGGAA------TTATTTAAACAAATAACTTTAAAAAAGtcatgat
gi|2 : tatgataagatctcgtgctcgccAAGTTA---GACAGGCATTATCCACAAT---CTGGAGGGGTGAAATTAT-TA-GAGGAGAGGTTCT-TA-ATTGTACTA-AAAAATA-ACATGAAAA-AATAACAAAATCTTCCTAGAGTAGCCGATGG-TTACA--CAACAG-AATTC-TTCAATTTTTTTT---GGAATG--------------ATATTAAAA--TATTTA---TGT---TGTAAAG-AGCCATAAAT-TGTATTTTTGTAA-GAGG-AAACTT-CCCTACTTCACAAAGACTAGGA-ATTATTT-CT-TGTTTACCTAAAGGTGAC-AAGCCAAGAC---AGTTTT-ATAACAA-TT-GGAGGCC-------AAT--T-TACACTT--TT--A---AATGGTACT-ATACAACAAT-TATATTCTGCG-TTGTCTT--AGCTACTCAGAATAAAA---AAA-AGTTTTGGAATTATTT-AATATATG-ATA-CACAGTC-TG-GGTTTTTG-AAGG--AA--G---ATTAATATAGGGA-GAG-AATACTCGATTTATTT-ATGACATGTATG----CATTACACTGAAA-GGA------AAC---AATATCCAGG--T-CATCTAGTACTTC-A--T--GATT-T-GAGAAGGCCTTTGA--CT-C-A-TG-CATG--T-CTTTCATT-TATAAG-GT---G-TTA----TA--CTAT----TTTGGTTTTGG-G---GA--A-ACTTT-A-TTCC---A--AGT-GGATAA-AGATT-T-TAA-A-CT--CAAAT--TTC---AGAGG--CTTCAAT-TTTACA-G-A----GTGGATTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAAAGA-G-GGGGTGTAGAC-A-GG-GGGACCCTA-TTG-CCA---G--CCATATTT----ATTCATATTTATGC-T------GGC-C---GAAATA--TCTTG-CCAATAGT-TAAT-TAAGA-CA-AAACAA--AGGTA-TATAAAG--GATATA----TGT---A----TA-AA--A----------AAACACTGAAACA-TAAGGTTATC-ACAAT-ATATGCAGA-TGAAT-AC-T---TCCCCAC-TAGCCCTTGATGGTTTCACAAtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacaatactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|2 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgtt--AA---TA-CTCCTAAAAAC-TAA-AATTGT-TT-GATTTGGTTTGCAAAAAAAA---ATTCTGAA-CCAAGT-TTTCCA-CCA-TTACCAA--GAT-GGGA--AATAGATT--GGGTGATCAACAA--ACC-T-TTAAT-TTAT-TAGGT-AT---TAATGTCT-TT---GATCG--A------GAA---A-ATTGAA-GATTTT----AAATT--TTT---GGA--CTC-CAAATT--CCT-AA-AATTGTT---GCTC-TGATTAAAC-A-GTG-GAGGAG-A-GAATTC-A----AT-T--ACTCCT-ATT--GGTCGG-GT-CACTG-TGA-TTTAA----ACCTT-GCTTATTT-GCCA-AAATTAAATC-ATT-TGT-TCATA-T--C-TGT--CGTTCCTAC--TCCT-AAA-AAGG-AGGACAATTTCAA-TATTT--ATGCC-----AA--AATTT----TATTCG-AATTCTTG----TGG-AAGTCTAGTGT-AGATA-AAGTC---CAAG---AGGTCGTAATAAC-CCAA-G-ACATATCTTATCAGTG-----TATAAGATG--T--AGGTA----TAAACCAACTTTAATTAT---ATCCCTGAA----GATGCTCATG-GATTAAAAGGCTTACTAAGTCAGATTGTCATAAATTCTTGGATTA-ATA-TTTTGTGCTGTG-----TATGGAAATGAAT-ATTCT-TATGAAG-TATAT---GATTTTGGAGATAT-T----TA--TTGAAGAATGG-tactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|20 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacGAAAGCTGG--CTTA-AAATGG--TTGGAGTG------AA--AACGT---GTAT---ATTTTTAAA----T-TA--CATATGATCAAA-CGTTAACAA-CT--G---GTTACAAA-CCATGG-TTAGATA-TTTT---CTTTG--ATCC-TGGCAAC-AA--G-TGG-TACAAAATT-TGTTA-GATTTTCGTGATGA-A----TATGTT--AAACTGG-TATATG-A--TCATAGT---GAT-GCTTGG-CAA-G-ATG-TTTT-CAGTGATgttttgcaaggaaaaaaatgagca
gi|21 : -AAGG--AA--A---GAATATG---GAA-GAG-ATTGCAAGATTCATTT-CTGATTCAGA-------ATTATAAT-AACTGGACT--------------------T-T-TA-GTATTATT------T--GATT-TGGAGGAAGCCTTTGA--TT-CTA-T-TCCTGG-T-CATATATT-TATGAA-GTACAT-GTATAAGAA--TTG-----TTTGGATTTGG-gtt
gi|22 : catctcattttggatgatacCAG-GG-GTGATCCTG-TTG-C-----G--CCATAT------ATTT-------TTC-TGCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGTAT-----TGTG--A----TT-AATGA----------TAA----AGAACA-TAA-CTTATC-TCA---GCATGCTGA-CG-AC-AC-T---TC----T-agaaagtacgacgtcttatttacggagtaaagat
gi|23 : TGCCTAAAGGTGAT-AAACCAAGAC---AATTTT-TAAACAAC-T-GGCGTCC-------AATTAC-A---CTT--TT--A---AATG-TAC-CATACAA-GTT-TATGTC--GGG-TTGTC--CAAGTTTC--AGAATTTAACAGGTCT-----TGGA-TTATAT-AATTTCTG-ATA-cttg
gi|25 : aAATATG-----AAA-AATAACAAA-TCT-CCAGGT--AGT-GATGG-TTATA--GTGTTG-AATTT-TTAAA--TTTTTT---GGGGGT--------------AGATCTGAAAGAAATTA---TAT---T--AAAGTCAAT-TAATTGTATATTCTCCA-A-AAAG-GAGCTT-CCC-AT
gi|26 : CTAGAGTAGGGG--ATGTACTA--ACT-T-TCAA-CTTAT-TA-GC-AT-AGGAAT--TG-TC---TGTGG--A-GTAGAGAATAAATATAGTT-GATTT-----AAATT--ACAAATGGAGGGTG-CAGATACGCCA-AAGAGTTAA
gi|27 : -TTTTCCAGTCAT-GG-TTGTC-TATGGTG--AAAAAA--TGGA-TA-ATAA-TCATTC-AGTCCA----AT-TTATTATTTTTGTCCCA-ATATGGTATAATA-CA-AATCTCTGT-GTT-GGAAgt
gi|3 : TACTTC--GC-TTATTT-G-TATCGG-ATA-GTCAAGGGTT-G-TTTATA-AAGGTCGA--C---ATACATT---GGAAGAGTAATGCAAG-TTTGTGA-A-GATCTCG-TGC---TCTTTCACTGAATTGGACC----AAT---A-CA--CAGGG-A-TA-TTTGAACT-C-A------GTT-GTGAAAAAGCTTTCGAGACT-C-A-TATC-TGGAT-AGTTTAT-CTATAAA-GT---T-CTA----AC--CTATCTACTTTGGATTTGG--------------------------A--GAT-GGTGTA-AAATT-TGTAA-A--A--CAAAC--CAT---AGAGGAACATCTGTACTTACA-A-A----GCGTATTTCCTT--TCAT-AA--CACATATTGCATTATAC--CAGAG--G-GTTG--CAGACAA-GG-AGTATCCTA-TGA-CTAGCGA--CCATTTTT----GTTA-------TTC-A------TGG-C---AGAATGTATCTAG-CTATTTCT-TG---CAA-G-CGCAAATAA--AG--A-TATTAAG--GTGATA----TGT---A----TG-AATGA----------TGC----GGAGCAACAA-AATCTC-TCA---ATATGCAGATCT-ACCAC-A---TT----T-TGGCTCTTGATGGTTCCCCAAAATCTCT--TTTTGCGTTATGCTCTT--A-TA-C-ATT-AACACTTTTACTC-TA---C--TTTTTCTGGATT-CAAA-TA--AA---TAGCTC--CAAAA--AAA-AATAGT-TT-GGATAGGCTT-CTAAAACAT---TT-CT-AA-G-AAGT-ATATCA-CCA-TA--CAC--AATAGGAAATGCTGGAGT--GGG--ATGTACTT---CT-T-TCAAGCTTAT-TAGGGCATTG-GAAT--TT-CT---TGCCG--A-G---AGAATAAA-AT-GCAAGCTTTTTTCTAAATT--AC----AAT--ATTTCAGATA--CCA-AA-AAATAAA---GCTTATGATACA-----GTT-GAATAGAAAGAA----A----ACTC--ACTC-TCATT---GTCGG--CGCACAG-TTG-CCAAAA----CACT-ACTTT--T-ACCT-AAGCTTAATCCATC-TTTGTTAT--G--C-ACT-----GCCAAA--TTCA-AGATAAAG-AATA--------A-TGTCT---TCTCT---TGAATAGTTT----TTTT-----TTTATTACTATGG-A-ATTCAAGATT-GACA-GGGTT---CAAGA-CAAACTGT--TACT-CCAA-G-ATTCACTTGAAAAGTGG--CTTA-AAAATGGTT--GAGTG-----AAA--AACTT---C--------CTTTAAAGACTG-TA--CATGTGATAAGAACGTTAACAAACT--GATC---ACAAA-CCATGG-TTAGATA-TTTT---CTTTTAAATCCATGGCAAC-AAT-G-TGGCTACAAAA-T-TTTTGCGA-TTTGGTGATGA-A----TATCTT--AAAATGGTT-TATG-A--TCACAGTAATGAG-TTTTGGCCAT-G-ATGTTTTTCCAGTCATGGG-TTGTCGTATGGTGAAAAACAA--TGGA-TA-ATAATTCATTC-AGTTCAAAAGAT-TTA-----TCTGTTCC--GTATCGTATAATA-CA-AATATCTGTCGTT-GGAAATAAAAA-GCTTATGTTTAAAACATGACATGCT-CAT-GGT-TG-AAAATAATTTGGCGAACTTTTTTAG-ATGAAGA-TGTAAA
gi|30 : -G-----AAA-AATAACAAA-TTT-CCGGGA--AGT-GATGG-TTTTA--CAGTTG-AATTT-g
gi|4 : atAAAAACCT-G-CGTCCCCAATACACT--T-T---CTT--TT--ACTGAATG-T-CTTGTATAA-ACT-TATATC--AGG-ATGTATA--AGCAAC--AGAATTACA----TCTACCACTAGA-TTATT--AATATCAGCGTAGCTCAAAC-TG-GCTTTCTG-AAAGCTGAATG---ATACATA---GGA-GAA-AACACTAG-TTTATTT-ATGATCTTGATGTTTTTCTTTCACAGAAA---GCT----AACCAAA-T-TCCAGGA-T-TA-CTAGTACT-T-T--TTGGATTCTTGAAAAGGCTTTTGA--TT-CAA-TTTCTTGG-TCCTTTTATT-TACAAACGT---T-TTA----AA--ATAT----TTTTGGTTTGC-G---GATCATACTGT---TT-----ACGATT-GGATTA-GAATT-C-TGA-A-CA--CAAAT--T-CTCAACAG---CTTCGGT-TCTACATA-G----GTGCGTTT--CTATTCTGCAA--CA---GTT-CAAAATGTTGAACGTC-G-G-TG-GCAGACAACGGCGGCATCCTGTTTGTC-----A--CCATATAT----TTTC-------TCC-T------TGTGCTTAGCAA----TCTGG-CT-CT-CTCTGATGCAA-A-CA-AAACAA--AG--ACTATAAAATTGCTATCTTGTTGC---A----TT-AACGATTTTTCTTTTAAA----CGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AC-AC-TTCCTC----T-TCTCCTTCGAATGTACTCCTAAGTCTTTA-TTCCGC----TGCCCTTCGATTACCTATT-GAT-TTTTTTCTCAAA---A--TTCT-CAGGACTCCAAA-TA--AA---TACTTC--AAAAACTTAA-AATTATCTC-GGATT-GAT--CAAAAAAAT---TCTCGGCATG-AAGTCATTTCATCCATTT--CGACCGAT-GGAA--GCTGGATTG-GGG--ATGCACTG--ACT-TCTCA--TTTATATAGGA-AT-A-C-AT--TT-TCGAGGGTAGACA-TT----AAC-AA-ATTACG-AA-CT-----AAATT--AT----GGA--ATT-CAGATA--CCA-AA-AATAAAA---GCTA-TGATACAAC-A-GTGCGAGAAGAA-GCC----G----AT-CTAACAC--CAATA-GGTCGGTGTA-ACAGCTTG-TT--AAG--ACACT-ACTTG--TCCCCA-AAACTCAATC-ACC-TTT-TTAT--T--CTCCT--C-TACCAAA--CCCTAAAA-AAAG-AG----------ACTATTTTCATCATTAAGTAAAGAGTTA----TTTC---AATTCATT----TGA-ATGCCTAACATCAGATA-AAGTCAAACAAGAAC-AACTGT--TA---CCAACG-ACCTATTTGAAAAGGGGGTCTCT-AAAATG--
gi|5 : AGATGGGTGGAGGAGAGCGAG-AAATCCACTAAATATTTCTGT-AACCTAGAAT--CTAGAAACACTCCTTAA--AAACAA------TCAAAAAAGGGTTAAAACTATCGAAAAGGTAATG-ATTGATACTCATTCGGA-CATgtgcgttcgattatttactaaatttattatttctcttgaaatgttcatggata
gi|5 : cacgatcaTG-AACGTGAAATTTG-T-TAGCGT--TA-AAGAATATG-----AAA-AACAACAAA-TCAACCGGGA--AA--GATGG-ATTTA--CAGCAG-AATTT-TACAAGTTCGTTT---GGAATGAAGCTATTTATTAAAGATGTAAA--GATCTA---TATTACA--AAAG-CACT-TCA-T-CATATATTTCAGT-GTAT-ACATTTGCCA-GCATCACAAAGACT-TGAGATTA--TACTATGTTAACACAAGGGAGAT-AAAGC-AGAG---AGTGTT---AAAAA--T-GGCGACC-------AATAAC-T---CTT--TT--A---AA-A-TATTTCTGCA-----------C--GG---TG-CTTTTA---AC--A-AATTA--------TACTTCTgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggtgaacgtgaaatttgttagcgttaaagaatatgaaaaacaacaaatcaaccgggaaagatggatttacagcagaattttacaagttcgtttggaatgaagctatttattaaagatgtaaagatctatattacaaaagcacttcatcatatatttcagtgtatacatttgccagcatcacaaagacttgagattatactatgttaacacaagggagataaagcagagagtgttaaaaatggcgaccaataactcttttaaaatatttctgcacggtgcttttaacaaattatacttctttctatctggtctt
gi|6 : cacgatcaagatgggtggaggagagcgagaaatccactaaatatttctgtaacctagaatctagaaacactccttaaaaacaatcaaaaaagggttaaaactatcgaaaaggtaatgattgatactcattcggacatgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-CATAAAA--GGTAT-----TGTG--A----TT-AACGA----------TAA------AATA-TAA-ACAATC-TCA---GTATGCTGA-CG-AC-AC-T---TC----TCTTGCTCTTGATGGTACTCTTAAGTCCTT--ATTCGC----TGCCCTT-GA-TA-CTATT-GAT-TTTTT-CTC-AA---AA-TTCT-CAGGACTAAAAAATA--AA---TATTTC--AAAAAC-TAA-AATTAT-CT-GGATTGAAT--AAAAAAAAAAAATCTCGGAT-G-AAGT-ATTTCA-TCA-TT--CGA--GAT-GGAA--GCTGGACT--GGGG-ATGCGCTG--A-T-T-TCAATCT-AT-TAGGA-AT-A-TATT--TT-TC---GGTAG--AATT--AGA-CAAA-ATTATG-GAACT-----AAAGT--AT----GGA--ATT-CAGATA--CCA-AA-AAGAAAA---GATG-TGATACAAC-A-GTG-GAGAAGAA-GGATTCTA----A--C--AC----CAATA-GGTCGG-GTA-ACAG-TTG-TT--AAG--ACACT-ACTTA--T-CCCA-AAACTTAATC-ACC-TTT-TTAT--T----TCT--C-TACCAAA--CCCT-AAA-AAAG-AGA---------A-TATTTC-ATCATTAAGTAAAGAGTTT----TTTC---AATTCATC----TGGAATGCTGA--ATCAGATA-AAGTC-AA-AAGAAC-AACTG-----------A-G-A-TTATTTGAAAGGGGGT-CTTA-AAAttctatctggtctt
gi|7 : AATGGAATGCGGAAA---A-T-TCCACGT-C-TT-CTAGT--T-T-AATT--GATT-TTGAGAAGGCTTTTAA--CT----------TGG-T-CCTTCA-GATATAAA-GC---T-TTC----AA--GTAA----TTTGGTTTCGG-A--T-A--ATATT-T-CATT-----C--AAT-AGATAAGATATT-T-TAAGA-CA--CAGATA-T-C---AGAG---CTTTCAT-TTTACA-AGA----GTAGAGTT--TTA-TCAG-CA--TA---GTT-AGATATAC--AA---ATG-GTAT-GTAGA-AA---------------TG-C-----A--CCATATTT----ATTT-------CTCATATG---TGC-T---GGAAT---------------------T-CAA-A-CA-AAACAA--AA--A-TATAAAA--GACATA----TGTTCAG----TGTATTGA----------AAACAC-AGAACA-TGA-TATATCGCCATATATATGCAGA-AT-AT-AC-T---TCA---G-TAGCTCTTCATGGTTTAACTGCATCCCTGGTATTGG----TG--TTT-GA-TA-CAATA-GAA-TTTTT--TG-TACAGT--TTTT-CTGGTCTAAAGA-TT--AA---T-TCTT--CTACAC-GAATAGTGGT-CT-GGATTGATT--AAAAAAAA-----TTCAGAA-C-CAGT-TTTTCA-TCA-TA--GAA--GAT-GGAA--ATTGGATT--GAG--G-GTTCTT--AAT-A-TCTAACTTAT-TGGAT-AT-T-CAAA--TT-TC---TGTTG--A-tggt
gi|8 : cAGGA-T-TA-CTTGTGCA-C-A--TA-GAAT-TTGAAAAAGCTTTCGA--CT-CCA-TATCTTGG-A-AGTTTAT-CTAGAAA-GT---A-CTT----AA--TTAC----TTTGGATTTGG-G----G--ATAATAT-AATT-----A--CAT-GGGTTA-AAATT-T-TAA-A-TA--CAAACAAT-----AAAG---CATCTGT-ATTACA-A-ATTAAGCGGTTTC--CTT-TCAG-AA--CA---AAT-TGAGATAC--A-GAGA-G-GTTG--CAGACAA-GG-AG-ACCCTA-TCG-C-----A--CCATATTT----ATTTA------TCC-TATG---TGC-A---GAAAT---TCTAG-CTATT-CT-TG-T-CAA-G-CA-AAATAA--AG--A-TATTAAA--GGTATAA---TG----A----TG-AATGA----------TGA----AGAGCA-CAA-AATCTC-CCA---ATATGCAGA-CG-AC-ACAT---TT----T-TGGCTCTAGGTGGTTCCCAAAAATCTCT--TTTTGC----TGCTCCT-GA-TA-CAAT--AAA-TTATTACTT-TA---T--TTTTTCTGGATTACAAA-TA--AA---TAGCTC--AAAAAC-AAA-AATAGT-TT-GGACAGGCT--CTAAAACAT---TTCCTAAA-G-AAGT-ATATCA-CCA-TA--CAA--GAT-GGAA--
gi|9 : AA-ATTGAA-GATAT-----AAATTTTA-----GGA--ACT-CAAATT--CCTTAA-AATTGTT---TCTC-TCATTGAACGA-GTG-GAAGAGAA-GAA----ATTCTAT-T--A-TCCTTACTCTGGTCGG-GTACACTG-TGA-TTAAAA----CACTTGCTTA--T-TCCA-AAATTAAATC-ATTGTGT-TCATAAT--C-TCTTGC-TACT-----CCTT-ATA-AAAGTAC----------A-TATc
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): GCTTACTAATCAGAATGTCATAAATCTTGGGATTAATATTTTTTTTGCTGTGTATGGAAATGATATTCTTATGAAGTTATTATGATTTTGGAGATAGTTTTTATGATCAGAAGATGTTTCTTAAGGAAAAAA
Unaligned ( gi|28 ): TCCCTACTTCCAAACGGGATACAATTTCATACTTATAAATTCAAAATTTTATTTCGATTCTTACGGAAATCTAATAGTTTATGGTAACACAAGACTATCTATC
Unaligned ( gi|29 ): CTTGAGCAGAAAGAAATGAAAAGTGGTCTATTTCATGCCATGCTTTGGATG
Alignments
lowQualScore : 1 22 1 222 11 22 222 11 222 1 1 222 222222 222 2222 1 1111111 22 1 2222222 11 1111 1 11 111 44444444444444 11 11 111 222222 111 111 111 11 4444444444 1 2 222222 2222 2222222 111111 11 2222222222 11111 1111 222222222 1 1 222 3333333333333333333333 22222222 111 3333333333333333333 11111111 111111 44444444444444444444 11111 111 222222222222222 22222 111111111 333333333333333333 111 222222 11 1111 1 1 222222222 1 111 11 11111 111 11 1111 1111 3333333333333 11111 11111 22222222 11 111 444444444444444444444444444 11 11 2222 111111 22222222222222 11 4444444444 33333333333 1111 2222 11111 11 3333 111 22222222 11 11111 33333 11 3333333333 222222 11 1 2222222 1 1 1 111 2222222 11 11 111 1 111 222 3333 1 1111 222 1 1 11 1 1 1 11 222 1 1 1 1 11111111 2222 1 2222 1 1 1 1 1 111 1 11 1 1 1 1 1 1 2 1
lowQualScore : 2 00 3 1 555 1 88 0 44 00 0 555 88 222 1 1 5 1 1 1 5 111 999999 1 111 2222 1 6 0 0 2222222 33 0 0 2222222 6 6 22 2 999999 6 2222 6 3 1 00 444 77777777777777 8 00 11 1 444 666666 99 1 8 444 777777 6 6 77 1 8 8 0 6 6 8 3 1 88 6 000 000 99 5 0 66 3333333333 5 5 66 888 5 3 3 5 0 99999999 1 6 0 66 111111 111 2 5 5 1 4 5 5 1 6 3333 1 5 0000000 000000 5 666 00 0 1 5 1 5 1 5555555555 0 2 7 0 22222 8888888 4 1111 4 0 777777777 4 1 55 4 6 4 7 0 3 3 1 333 3 66666 7777 666 7777 1 3 44 5555555555555555555555 7 1 3 2 3 7 3 88888 33333333 111 1 4 4 4 8888 1 1 55 55 4 55 777 4 1 1 4444444444444444444 0 6 3 3 7 3 3 77777777 000000 99999999999999999999 00000 000 2 000000000000000 3 3 3 55 55 4 555 4 00000 888888888 66 4 555555555555555555 4 4 1 4 333 1 4 4 4 88888 222222 1 1 11 1 11 0000 0 5 5 5 55 66 2 111111111 0 0 0 999 66 777 9 66 55 4 1 4 4 1 1 888 1 4 11 777 99 4 4 777 66 4 66 1 55 00000 222 4 4 33 4 66 3333 66 5 6666 1 4444444444444 5 22222 44 77777 11111111 66 5 2 66 00 5 000 66 7777 555 5 1 5 555555555555555555555555555 66 55 5 1 5 44 0000 66 888888 5 1 5 6 1 6 99999999999999 3 99 00 1 6 6 5555555555 6 22222222222 1 1 7777 5555 88888 8 99 1 77 77 8 2222 999 3 55555555 8 8 44 2 55 6 55555 66666 33 5555555555 777777 33 0 1 88 3 3333333 0 0 0 0 2 0 777 4444444 2 00 33 111 0 111 0 444 0 8 0 3333 0 8 8 0 4444 777 0 0 44 0 88 0 9 0 0 33 2 666 0 0 0 3 0 33333333 5555 0 1111 2 3 0 0 1 5 0 0 000 3 44 3 3 6 3 3 6 3 2 6 1 3
lowQualScore : . .. . . ... . .. . .. .. . ... .. ... . . . . . . . ... ...... . ... .... . . . . ....... .. . . ....... . . .. . ...... . .... . . . .. ... .............. . .. .. . ... ...... .. . . ... ...... . . .. . . . . . . . . . .. . ... ... .. . . .. .......... . . .. ... . . . . . ........ . . . .. ...... ... . . . . . . . . . .... . . ....... ...... . ... .. . . . . . . .......... . . . . ..... ....... . .... . . ......... . . .. . . . . . . . . ... . ..... .... ... .... . . .. ...................... . . . . . . . ..... ........ ... . . . . .... . . .. .. . .. ... . . . ................... . . . . . . . ........ ...... .................... ..... ... . ............... . . . .. .. . ... . ..... ......... .. . .................. . . . . ... . . . . ..... ...... . . .. . .. .... . . . . .. .. . ......... . . . ... .. ... . .. .. . . . . . . ... . . .. ... .. . . ... .. . .. . .. ..... ... . . .. . .. .... .. . .... . ............. . ..... .. ..... ........ .. . . .. .. . ... .. .... ... . . . ........................... .. .. . . . .. .... .. ...... . . . . . . .............. . .. .. . . . .......... . ........... . . .... .... ..... . .. . .. .. . .... ... . ........ . . .. . .. . ..... ..... .. .......... ...... .. . . .. . ....... . . . . . . ... ....... . .. .. ... . ... . ... . . . .... . . . . .... ... . . .. . .. . . . . .. . ... . . . . . ........ .... . .... . . . . . . . . ... . .. . . . . . . . . . . .
lowQualScore : 0 00 3 0 777 0 33 7 33 00 7 777 00 000 0 0 5 0 0 0 5 000 555555 0 000 5555 0 7 0 8 5555555 88 0 8 7777777 7 7 00 2 555555 7 2222 7 3 0 66 000 00000000000000 8 22 00 4 000 000000 44 0 0 888 111111 7 7 77 0 0 0 8 0 0 0 7 0 00 6 000 444 66 0 5 99 6666666666 0 0 99 888 0 1 9 0 1 00000000 6 9 5 99 888888 888 8 0 0 7 0 7 7 0 7 3333 0 0 9999999 888888 5 111 44 4 0 0 0 0 4 0000000000 8 5 2 9 11111 4444444 4 0000 0 3 666666666 0 2 55 0 0 0 3 8 6 6 0 777 6 55555 1111 999 1111 0 3 66 8888888888888888888888 3 0 6 6 6 3 6 55555 44444444 000 0 0 0 0 5555 2 0 55 11 0 55 000 0 4 4 3333333333333333333 8 5 6 6 4 6 6 44444444 333333 55555555555555555555 55555 000 3 888888888888888 3 3 3 00 55 0 999 0 66666 333333333 33 4 666666666666666666 4 4 0 4 999 0 0 0 0 77777 444444 0 0 11 2 99 6666 0 0 0 9 44 00 4 999999999 0 8 8 444 11 888 7 11 88 4 0 4 4 0 0 333 0 9 99 222 99 4 4 111 11 4 11 0 00 00000 666 4 4 00 4 00 2222 99 0 4444 0 6666666666666 0 11111 99 55555 00000000 99 0 2 99 55 0 000 77 7777 999 7 0 7 111111111111111111111111111 44 00 7 6 7 44 6666 11 333333 7 0 7 7 0 7 55555555555555 5 22 22 8 7 7 0000000000 7 88888888888 8 0 0000 8888 00000 0 22 0 66 00 0 2222 222 8 00000000 0 0 66 5 88 7 88888 88888 88 2222222222 555555 88 5 0 00 2 0000000 8 2 0 0 5 0 555 8888888 5 22 22 000 5 000 2 000 8 0 8 0000 8 0 0 0 8888 000 0 0 22 0 88 8 2 0 0 88 5 555 0 0 0 2 0 88888888 5555 0 8888 5 2 0 0 0 5 0 0 000 3 00 3 3 7 3 3 7 3 0 7 0 3
consensus : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTTAA-CAAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AAT-A---CT---C-TT-TT--A---AATG-TACTTATACAA-ACTTATATC--G-GG-NTGTCTTNAGCTAC--AGAATT-AA---ATCTACTTCTNGA-TTAT-TTAATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--G-A--GAT--AC--ATAGG-A-GAG-AATACNAGATTTATNT-ATGATCTCGATG----TCTTACACTGAAATGGACT----AAT---AT-TC-CAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-T-CNTTTATTCTATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGGG-G--A--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAA-GG-GGGACCCTG-TTG-C-----A--CCATATTT----ATTT-------TNC---T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-ATA----TGT---A----TG-AACGA----------NAA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-T---TC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GA-TA-CNATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACT-ANAAATA--AA---TANCTC--AAAAAC-AAA-AATNGT-TT-GGATNGGNT---CNAAAAAATTTTCNGAA-G-AAGT-NTTTCA-CCA-TN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--ATT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTACACAG-TTG-TTAAAAG--ACACT-GCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCNCTAAGTGAANAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAA----G-TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
Reference ( family-2981 ) : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ACTCCTTAATTAAACAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TA-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AAT-----CT---C-TT-TT--A---AATG-TACTTATACAA-ACTTATATC--G-GG-NTGTCTTTAGCTAC--AGAATTAAA---ATCTACTTCTNGA-TTAT-TTAATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--G-A--GAT--AC--ATAGG-A-GAG-AATACNAGATTTATNT-ATGATCTCGATG----TCTTACACTGAAATGGACT----AAT---AT-TC-CAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-T-CNTTTATTCTATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGGG-G--A--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAA-GG-GGGACCCTG-TTG-C-----A--CCATATTT----ATTT-------TNC---T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-ATA----TGT---A----TG-AACGA----------NAA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-T---TC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GA-TA-CNATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACT-ANAAATA--AA---TANCTC--AAAAAC-AAA-AATNGT-TT-GGATNGGNT---CNAAAAAATTTTCNGAA-G-AAGT-NTTTCA-CCA-TN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--ATT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTACACAG-TTG-TTAAAAG--ACACT-GCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCNCTAAGTAAANAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAA----G-TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
gi|1 : AAATGGGTGGAAGA-AGGGA--AAACCTAGTAAATATTTCTGT-GCTTTAGA---TCTCGTA--ATTTTTTAATTAAATA---TCAAAAAAGG--TAAAAC-A-CAAGAAGTCGAGGTATTTATAACCAGTTGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAG------TTCAAAATTCTCTGGA----TAAAGTAATCTGAAAAGTGAAATTTT-TACAA-GTC-TG-AAAAA-A-G-----AAA-AATTACAAA-TCCACCAGGA--A-T-GATGG-ATTCA--T-GTTG-AGTTTCTTTAAG-TTTTTT---GGAAGG--------------A-ATC--AA--GAAATA---TGT---A--GAAG-TGTT-TAATT-CAAATTTTTAAGA-AAAG-GAGCTT-CCA-ATATCACAAAGACT-GGA-TTTAATCACT-TGTTTGCCAAAAGGTGA--AAACCTAGAC---AATTTC-TGAAAAATTT-GGCGTCC--ATT-----CT---C-TT-TT--A---AATG-TGCTT-TGAAA-ACTTATATC--G-GGCCTGTCTTTTACTAC--AGAATTAAA---ATCTACTTCTTGA-TTAT-TTGATATCGG-ATT-GTCAATC-T--G-TTTATA-AAGG--G-T--AAT---C--ATAGT-A-GAT-A--ACAAGATTTGTGT-ATGATCTCAATG-----CTTTCACT-AATTGGACT----AAT---ACATC-CAGGA-TACA-CTTGTGCT-CTA--TA-GATT-TTGAAAAAGCTTTCGA--CT-C-A-TATC-TGG-A-AGTTTATTCTATAAA-GT---TCTTA----AA--C-------CTTGTATTTGGGCG--A--ATATTATAAATT-----A--CAT-GGGTTA-AAATT-TCTAA-A-TATTCAAAC--A-T---AAAG---CATCTGT-ATTACA-A-A----GCGGTTCC--TTT-CCAG-AAAGCA---AAT-TGATATAC--AAGAGA-GCGTTG-GCAGAC-A-GG-AGAACCCTA-TCG-C-----AATCCATA-TT----ATTT-------TCC---T------TGT-C---GAAAT---TCTAGTCTATT-CT-TG-T-CAA-AGCA-AAATAATGAG--A-TATTATG--GAT-A-A----TG----A----TG-AATGAG---------GAA----GGAGCA-CAA-AATCTC-CCA---ATAT-CAGA-CG-AC-AC-T---TT----T-TGGCTCTGGATGGTTCCCCAAAATCTCT--TTTTGC----TGCTCTT-GA--A-CAAGT-AAA-TTATCACTC-TA---C--TTTT-CTGGATT-ACAAATAGGAA---TA-CTC--AAAAAC-AAA-AATAGT-TT-GGATAGGCT---CTAAAAAATTTTCTAAA-G-GAGT-A-TACA-CCA-TA--CAA--AGC--AAA--GCTAGAGT--GGG--AT-TACT---ACTAT-CCAATCTTAT-TAGGC-AT-A-GAAT--TT-TC----GTGG--ATA--TGAA-AAA-ATAGTG-GATTA-----AAAAT--AC----AAT--ATT-CA-ATA--CC--AA-AATTAAA---GCTT-TGATAC-AC-ATCTG-GAATAGAA-GAA----A----AC-C--ACTCCTCATT---GTCGA-GTCCACAG-TTGCTCAAAAGACACACT-GCTT-T-A--CCGTAAGCTTAATC-ATT-TGT-TTAT--TGGC-ACT--A-TACCAAAATTCC------AGAG-AG----------A-TACTT--GTCTCT--CTGAATAGTTTGTTCTTTTTCGAATTTATA----TGG-AT-TCAAAGATT-GACATAGGTT--ATAAAGACAAAC-GT--TACTGGCAA-GAACCGACTT--AAAGTGG--CTTA-AAAATG--T--GAGTGTTGATAAA--ACTTTT---TATAGCATCTTTAAA----G-TAC--ATGCGATAAAAGGGTTAACAAACT--G-TCATTCAAAAC-CATGG-TTAGATATTTTT---CTTTGAAAT-AAT-GCATA-AATGGTGG-T-AC-AAA-T-TGTT--GATTTTGGTGATGATATAT----TT-A-AATGG-T-TATGAA--TCACAGTA--AAGATTTTGG-CAT-GAATG--TTTCCAGTCATTGGTTTGTC-TCCTTTA--AAACAATG-TGGA-TA-AAAA-TC--TCAAGTTC--AAT-T-TTATCGTTCT-GTCCC--A-TATGGT-TAATATCATAATCTC-GT-GTT-GGAAATAAGAGTATTTATG-TTAAAAAATGGCAT-CT-CATGGGTGTG-AAAATAA-TT-GCG-ACTT-TTTAGTATGATGATTGGAAA
gi|10 : cgggctGGTGATTAAACCTAAAC---AATTTT-TTAAAAAACT-GGTGACC--GAT-----TA---CATTGTT--A---AATG-T-CTTATATAA-ACTTATTTC--A-GG-TTGTC-TTAGTAAA--AGAATC-AA---ATCTACTT-TAGG-TCATCTCAAT-TCAG-ACA-CCCAGTC-TG-GATTCATG-AAGG--GAA--GAT--AT--ATTGG-T-AAA-AATACCAGATTTATCT-ATGATCT-AATG----CATTATACAGAAA-GTAAT----AAT---AT-TC-CAGGA-C-TA-TTGGTATT-G-A--TA-GACT-TTGAAAAGGCTTTTGA--TTCC-A-TTTCATGG-T-CATTTA-TATATAAA-GT---A-TTG----AA--ATAT----TTTGGATTTGGT-G--A--ATAC-AT-TATT-----G--AAT-GGGTAA-AGATTCT-TAA-
gi|11 : gttacacaacaacttaaatactcTCTG-AAAGTGAAATGTTGTACAGTCT--TGTAAGGATA-G-----GATTAATAACAAA-TACACCAGGA--AGT-GATAGATTTCAACTATTTGGAATTTGTTAAAGTTTTTTTTTTG--AGG--------------ACATCAGAA--GAATTAATTTGT---G--AACG-TGGT-TAAT--CACATTTT-AAGATAAAGAGAGCTT-CCA-ATCTCACAAAGACG-GGG-AT--ATCACT-TGTTT-CCAAAAGGTGAT-GAACCTCGAT---AATTTTCTGAAACATTTTGGCGTCC--AATTAT--CT---T-CT-TT--A---AATG-TGCTTGTACAA-AC-TATATA--GCGG-ATGTC-TTAGCTAC--AGAATACAA---ATCTACTCCTTAT-CTAT-T
gi|12 : TG-AAGG--G-AA-GAT--ATCTATAGG-G-GA---ATACTCGATTTATTTTATGAGATT-ATG----TCATACACTGAAAGAAACA----GAT---AT-TC-CAGGTCT-TC-TTAGTACT-C-A--T--GATT-TTGAGAAGGCCTTTGA--CT-C-AATGTCATGG-T-CTTTCATT--ATAAA-GT---T-TTA----AA--CTAT----TTTGGTTTTGGG-A--A--A-ACTTT-A-TT-----C--AAT-GGATAA-AGATT-T-TAA-A-TT--CAATT--T-C---AGAG---CTTCAAT-TTTAC--A-A----GTGGATTT--TTA-TCAG-AA--CA---GTT-CGACATA-----------------AC---CAA-AG-GGGTCCCTA-TTA-C-----A--CCATATTTATTCATTT-------TAT---G------TAC-C---GAAAT---TCTTG---------------------------CAA--AG--A-TATAAAG--GGT-ATA----TGT---A----TA-Agatacgat
gi|13 : TTT-CAGGTCT-AAGGATA--AA---TTTTTC--AAAGAC-AAA-AATGGT-GT-GGATAGGTA---GTAAAACATTTTCAAAG-G-AGGT-TTTCCA-TCA-TT--CAA--GGT-GGAA--ATTTGACT--GGA--A--CAATGAAACA-T-TGGAT-TTAC-TAGGG-AT-A-AGAT--TCAAC---AGTAA--CTT--ACAA-GAA-ATGGTT-GAAAT-----GAATT--AT----AAG--ACT-AAATTA--AAG-GA-AATTAAAAAGGTTA-TGAT---GC-A-GTG-GAATAGTA-GAA----A----TCGT--ACTCCT--TTA-GGAAGG-CTA-ACAG-TAA-T--AAAG--ACA-------------CCA-AAATTGAATC-AC
gi|14 : agttctccaacttctatggatgacattattagagtcctagattacttggcaataa---T-CTA----AA--ATAT----TTTGGTTTCGGG-G--A--TTA-TAT-G-TT-----A--GATTGGATTA-AGATT-C-TAA-A-TA--CATAT--TTC---AAAG---CTTCGGT-TCTACA-A-G----GTGGTTTC--CTA-TCTG-AA--CA---GTT-CAATAT-T--GAACGT-G-GTTG--CAGACAA-GG-GG-ATACTG-TTG-C-----A--CCATAT------ATTT-------TTC---TCCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAA-A-CA-AAACAA--AT--A-TATAAAA--GGT-AT-----TGT---AATTTTA-AACGA----------TAA----AGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AT-AC-C---TC----TCTTGCTCTTGATGGTACTCCTAAGTCATT--ATTCGC----TGCCCTT-GA-TA-CTATT-GAT-TTTT
gi|15 : TTTATGT-ATGACATT-ATG----TCATACACTGAAATAAAC-----AAT---AT-TC-CAGGT-C-TT-CTAGTACT-C-AT-T--GATT-TTGAGAAGGCCTTTGA--CT-CAA-TGTCATGG-T-CTTTCA-TCTATAAA-GT---T-TTA----AA--CTAT----TTTGGTTTTGGG-A--A--CAAAAAT--ATT-----C--AAT-GGATAA-GGATT-T-TAA-ATTC--CAATT--T-C---AGAG---CTCCGAT-TTTACA-A-A----ATGGATTT--TTA-TCTG-AA--CA---GTC-CAACATAC--AA-AGA-G-GGT--GTAGAC-A-GG-GGGACCATG-TT--------------TATTC----ATAT-------AAT---G------TGC-C---GAGAT---TCTTG-C-AAT-AT-TAAT-TAA-A-CA-AAACAA--
gi|16 : -AAAG-GAGCTC-ACT-ATTTCATAAAGATT-AGG-AATAATCTCA-TGTTTGCCAAAAAGTGAC-AGACACGGACACAAAATTT-TGGAAAAC-T-GATGTCC--TAT-----AA---C-AT-TCGGA---AATG-T-CTTATGTAA-ACTTATATA--A-AA-ACGTA-TAAGCTAC--GGAATT-TA---ATATAC-GCTAGA-TTAT-ATAATATCAG-GTA-CTCAAAC-TGTC-TTTCTGAAAGG--A-A--GAT--GC--AT--G-A--AA-AATA
gi|17 : ttttcttttttttgggggggggggggttgatttttaaaatattcatagtacaaagaataaataacatatatattcc-GATTTTGGTGATGA-A-ATAGTGTTAA-AATG--T-GATG-AATCCACAGTAT-GAG-TTTCGG-CACTG-ATG-TTTTCCAGTC-TTGG-TTGTC-TATGGTG--AAACAA-GATGGAATATATAA-TCATTC-AGTTCAAAATATGTT----TTCT-GTTCCCAG-TATG-TATAATA-CA-AATATC-GT-GTTTGGAAATAAA-GTATTTATG-TTAAAACATGGCA-GCTCCAT-GGTGTGAAAAATAA-TTGGCG-ACTTCTTTAGAATGAGAA-TGGAAAaaa
gi|18 : GA-TG-AT-AC-A---TCAT--C-TTGCCCTTGATGGGAATC-TAAGTCACT--TTTT------TAGCTTTAGA-TA-CGTTTAGAG-TTTTTTCTC-CA---AAGCTTT-CTGGTTT-TAAGGTA--AACTGTACC-----AAAAC-AAA-AATTGT-TTTGGATCGGAT---CAAAAAA--TTTCAGAT-C-TGGTCTTTTCA-TCA-TT--C-A--GAT-GGAA--ATTG--CT--GGG--CT-CAACA--ACT-T-TTAA-CTTAC-TAGGgt
gi|19 : gcgcG-T-CTTTTGTT-TATAAG-GT---T-TTA----AGGTTTCT----TTTTAATGTGGT-ACAA--ATACGAT-AATTTTATAA--AATTGGATGA-A-ATT-T-TAA-A-TA----ATT--T-T---AAAG---CTTCTAT-TCTTCA-A-A----GTGGCTTT--TTA-TTAG-AA--GA---ATT-T--CAT-------TGA-T-GTCG-TC-----A-GG-GAGACCCTG-TTT-C-----T--CCGTA--C----ATTT-------TTC---TTCTTTGTGC-A---GAAAT---TCTTG-CAATT-CT-C-AT-TAA-A-CA-AAAccaaaactaatataggtttttt
gi|2 : TGGATAGGGGAAGGGGAGGAAACCTTCGAAGTACTTTTGTAGGTCTCGAATTTCTAGGA--ATTATTTAAACAAATAACTTTAAAAAAGtcatgat
gi|2 : tatgataagatctcgtgctcgccAAGTTA---GACAGGCATTATCCACAAT---CTGGAGGGGTGAAATTAT-TA-GAGGAGAGGTTCT-TA-ATTGTACTA-AAAAATA-ACATGAAAA-AATAACAAAATCTTCCTAGAGTAGCCGATGG-TTACA--CAACAG-AATTC-TTCAATTTTTTTT---GGAATG--------------ATATTAAAA--TATTTA---TGT---TGTAAAG-AGCCATAAAT-TGTATTTTTGTAA-GAGG-AAACTT-CCCTACTTCACAAAGACTAGGA-ATTATTT-CT-TGTTTACCTAAAGGTGAC-AAGCCAAGAC---AGTTTT-ATAACAA-TT-GGAGGCC--AAT-----TTACAC-TT-TT--A---AATGGTACT-ATACAACAATTATATTCTG-CG-TTGTCTT-AGCTACTCAGAATAAAA---AAA-AGTTTTGGAATTAT-TTAATATATG-ATA-CACAGTC-TG-GGTTTTTG-AAGG--A-A--GATTAAT--ATAGGGA-GAG-AATACTCGATTTATTT-ATGACATGTATG----CATTACACTGAAAGGAAAC----AAT---AT--C-CAGG--T-CATCTAGTACTTC-A--T--GATT-T-GAGAAGGCCTTTGA--CT-C-A-TG-CATG--T-CTTTCATT-TATAAG-GT---G-TTA----TA--CTAT----TTTGGTTTTGGG-G--A--A-ACTTT-A-TTCC---A--AGT-GGATAA-AGATT-T-TAA-A-CT--CAAAT--TTC---AGAGG--CTTCAAT-TTTACA-G-A----GTGGATTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAAAGA-G-GGGGTGTAGAC-A-GG-GGGACCCTA-TTG-CCA---G--CCATATTT----ATTCATATTTATGC---T------GGC-C---GAAATA--TCTTG-CCAATAGT-TAAT-TAAGA-CA-AAACAA--AGGTA-TATAAAG--GAT-ATA----TGT---A----TA-AA--A----------AAACACTGAAACA-TAAGGTTATC-ACAAT-ATATGCAGA-TGAAT-AC-T---TCCCCAC-TAGCCCTTGATGGTTTCACAAtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacaatactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|2 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgtt--AA---TA-CTCCTAAAAAC-TAA-AATTGT-TT-GATTTGGTTTG-CAAAAAAAAATTCTGAA-CCAAGT-TTTCCA-CCA-TTACCAA--GAT-GGGA--AATAGATT--GGGTGATCAACAA--ACC-T-TTAAT-TTAT-TAGGT-AT---TAATGTCT-TT---GATCG--A-----GAA---A-ATTGAA-GATTTT----AAATT--TTT---GGA--CTC-CAAATT--CCT-AA-AATTGTT---GCTC-TGATTAAAC-A-GTG-GAGGAGA--GAATTC-A----AT-T--ACTCCT-ATT--GGTCGG-GT-CACTG-TGA-TTTAAA----CCTT-GCTTAT-TTGCCA-AAATTAAATC-ATT-TGT-TCATA-T--C-TGT--CGTTCCTAC--TCCT-AAA-AAGG-AGGACAATTTCAA-TATTT--ATGCC-------AAAATTT----TATTCG-AATTCTTG----TGG-AAGTCTAGTGT-AGATA-AAGTC---CAAGAG---GTCGTAATAAC-CCAA-G-ACATATCTTATCAGTG-----TATAAGATG--T--AGGTA----TAAACCAACTTTAATTAT---ATCCCTGAA----GATGCTCATG-GATTAAAAGGCTTACTAAGTCAGATTGTCATAAATTCTTGGATTA-ATA-TTTTGTGCTGTG-----TATGGAAATGAAT-ATTC-TTATGAAG-TATAT---GATTTTGGAGATAT-TTAT----TGAAGAATGG-tactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|20 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacGAAAGCTGG--CTTA-AAATGG--TTGGAGTG------AA--AACGTG---TAT---ATTTTTAAA----T-TAC--ATATGATCAAA-CGTTAACAA-CT--G---GTTACAAAC-CATGG-TTAGATA-TTTT---CTTTG--ATCC-TGGCAAC-AA--GTGG-T-ACAAAATT-TGTTA-GATTTTCGTGATGA-ATATG---TTAA-ACTGG-TATATG-A--TCATAGT---GAT-GCTTGG-CAA-G-ATG-TTTT-CAGTGATgttttgcaaggaaaaaaatgagca
gi|21 : -AAGG--A-A--AGA--AT--ATGGA-A-GAG-ATTGCAAGATTCATTT-CTGATTCAGA-------ATTATAAT-AACTGGACT--------------------T-T-TA-GTATTATT------T--GATT-TGGAGGAAGCCTTTGA--TT-CTA-T-TCCTGG-T-CATATATT-TATGAA-GTACAT-GTATAAGAA--TTGT----TT-GGATTTGGA-G--A--Agtt
gi|22 : catctcattttggatgatacCAG-GG-GTGATCCTG-TTG-C-----G--CCATAT------ATTT-------TTC---TGCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-AT-----TGTG--A----TT-AATGA----------TAA----AGAACA-TAA-CTTATC-TCA---GCATGCTGA-CG-AC-AC-T---TC----T-agtacgacgtcttatttacggagtaaagat
gi|23 : TGCCTAAAGGTGAT-AAACCAAGAC---AATTTT-TAAACAAC-T-GGCGTCC--AATTA---CA---C-TT-TT--A---AATG-TAC-CATACAA-GTTTATGTC--G-GG-TTGTC-CAAGTTTC--AGAATTTAACAGGTCT-----TGGA-TTAT-ATAATTTCTG-ATA-cttg
gi|25 : aAATATG-----AAA-AATAACAAA-TCT-CCAGGT--AGT-GATGG-TTATA--GTGTTG-AATTT-TTAAA--TTTTTT---GGGGGT--------------AGATCTGAAAGAAATTA---TAT---T--AAAGTCAAT-TAATTGTATATTCTCCA-A-AAAG-GAGCTT-CCC-AT
gi|26 : CTAGAGTAGGGG--ATGTACTA--ACT-T-TCAA-CTTAT-TA-GC-AT-AGGAAT--TG-TC---TGTGG--AGTAGAGAATAAATATAGTT-GATTT-----AAATT--ACAAATGGAGGGTG-CAGATACGCCA-AAGAGTTAA
gi|27 : -TTTTCCAGTCAT-GG-TTGTC-TATGGTG--AAA-AA-A-TGGA-TA-ATAA-TCATTC-AGTCCAA----T-TTATTATTTTTGTCCC--AATATGGTATAATA-CA-AATCTCTGT-GTT-GGAAgt
gi|3 : TACTTC--GC-TTAT-TTG-TATCGG-ATA-GTCAAGGGTT-G-TTTATA-AAGGTCG-A--CAT--AC--ATTGG-AAGAGTAATGCAAG-TTTGTGA-A-GATCTCG-TGC---TCTTTCACTGAATTGGACC----AAT---A---CACAGGG-A-TA-TTTGAACT-C-A------GTT-GTGAAAAAGCTTTCGAGACT-C-A-TATC-TGGAT-AGTTTAT-CTATAAA-GT---T-CTA----AC--CTATCTACTTTGGATTTGGA-G--A------------------------T-GGTGTA-AAATT-TGTAA-A--A--CAAAC--CAT---AGAGGAACATCTGTACTTACA-A-A----GCGTATTTCCTT--TCAT-AA--CACATATTGCATTATAC--CAGAG--G-GTTG--CAGACAA-GG-AGTATCCTA-TGA-CTAGCGA--CCATTTTT----GTTA-------TTC---A------TGG-C---AGAATGTATCTAG-CTATTTCT-TG---CAA-G-CGCAAATAA--AG--A-TATTAA---GGTGATA----TGT---A----TG-AATGA----------TGC----GGAGCAACAA-AATCTC-TCA---ATATGCAGATCT-ACCAC-A---TT----T-TGGCTCTTGATGGTTCCCCAAAATCTCT--TTTTGCGTTATGCTCTT--A-TA-C-ATT-AACACTTTTACTC-TA---C--TTTTTCTGGATT--CAAATA--AA---TAGCTC--CAAAA--AAA-AATAGT-TT-GGATAGGCTT--CTAAAACATTT-CT-AA-G-AAGT-ATATCA-CCA-TA--CAC--AATAGGAAATGCTGGAGT--GGG--ATGTACTT---CT-T-TCAAGCTTAT-TAGGGCATTG-GAAT--TT-CT---TGCCG--AG---AGAATAAA-AT-GCAAGCTTTTTTCTAAATT--AC----AAT--ATTTCAGATA--CCA-AA-AAATAAA---GCTTATGATACA-----GTT-GAATAGAAAGAA----A----ACTC--ACTC-TCATT---GTCGG--CGCACAG-TTG-CCAAAA----CACT-ACTTTT-A--CCT-AAGCTTAATCCATC-TTTGTTAT--G--C-ACT-----GCCAAA--TTCA-AGATAAAG-AATA--------A-TGTCT---TCTCT---TGAATAGTTT----TTTT-----TTTATTACTATGG-A-ATTCAAGATT-GACA-GGGTT---CAAGA-CAAACTGT--TACT-CCAA-G-ATTCACTTGAAAAGTGG--CTTA-AAAATGGTT--GAGTG-----AAA--AACTT-----------CCTTTAAAGACTG-TAC--ATGTGATAAGAACGTTAACAAACT--GATC---ACAAAC-CATGG-TTAGATA-TTTT---CTTTTAAATCCATGGCAAC-AAT-GTGGCT-ACAAAA-T-TTTTGCGA-TTTGGTGATGA-ATATC---TTAA-AATGGTT-TATG-A--TCACAGTAATGAG-TTTTGGCCAT-G-ATGTTTTTCCAGTCATGGG-TTGTCGTATGGTGAAAAACAA---TGGA-TA-ATAATTCATTC-AGTTCAAAAGAT-TTA----TCT-GTTCC--G-TATCGTATAATA-CA-AATATCTGTCGTT-GGAAATAAAAA-GCTTATGTTTAAAACATGACATGCT-CAT-GGT-TG-AAAATAATTTGGCGAACTTTTTTAG-ATGAAGA-TGTAAA
gi|30 : -G-----AAA-AATAACAAA-TTT-CCGGGA--AGT-GATGG-TTTTA--CAGTTG-AATTT-g
gi|4 : atAAAAACCT-G-CGTCCCCAATACACTTT---C-TT-TT--ACTGAATG-T-CTTGTATAA-ACTTATATC--A-GG-ATGTA-TAAGCAAC--AGAATT-AC---ATCTACCACTAGA-TTA--TTAATATCAGCGTAGCTCAAAC-TG-GCTTTCTG-AAAGCTG-AATGAT--AC--ATAGG-A-GAA-AACACTAG-TTTATTT-ATGATCTTGATGTTTTTCTTTCACAGAAA---GCT----AACCAAAT-TC-CAGGA-T-TA-CTAGTACT-T-T--TTGGATTCTTGAAAAGGCTTTTGA--TT-CAA-TTTCTTGG-TCCTTTTATT-TACAAACGT---T-TTA----AA--ATAT----TTTTGGTTTGCG-G--ATCATACTGT---TT-----ACGATT-GGATTA-GAATT-C-TGA-A-CA--CAAAT--T-CTCAACAG---CTTCGGT-TCTACATA-G----GTGCGTTT--CTATTCTGCAA--CA---GTT-CAAAATGTTGAACGTC-G-G-TG-GCAGACAACGGCGGCATCCTGTTTGTC-----A--CCATATAT----TTTC-------TCC---T------TGTGCTTAGCAA----TCTGG-CT-CT-CTCTGATGCAA-A-CA-AAACAA--AG--ACTATAAAATTGCT-ATCTTGTTGC---A----TT-AACGATTTTTCTTTTAAA----CGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AC-AC-TTCCTC----T-TCTCCTTCGAATGTACTCCTAAGTCTTTA-TTCCGC----TGCCCTTCGATTACCTATT-GAT-TTTTTTCTCAAA---A--TTCT-CAGGACT-CCAAATA--AA---TACTTC--AAAAACTTAA-AATTATCTC-GGATT-GAT---CAAAAAAATTCTCGGCATG-AAGTCATTTCATCCATTT--CGACCGAT-GGAA--GCTGGATTG-GGG--ATGCACTG--ACT-TCTCA--TTTATATAGGA-AT-A-C-AT--TT-TCGAGGGTAGACATT----AAC-AA-ATTACG-AA-CT-----AAATT--AT----GGA--ATT-CAGATA--CCA-AA-AATAAAA---GCTA-TGATACAAC-A-GTGCGAGAAGAA-GCC----G----AT-CTAACAC--CAATA-GGTCGGTGTA-ACAGCTTG-TT--AAG--ACACT-ACTTGTCC--CCA-AAACTCAATC-ACC-TTT-TTAT--T--CTCCT--C-TACCAAA--CCCTAAAA-AAAG-AG----------ACTATTTTCATCATTAAGTAAAGAGTTA----TTTC---AATTCATT----TGA-ATGCCTAACATCAGATA-AAGTCAAACAAGAAC-AACTGT--TA---CCAACG-ACCTATTTGAAAAGGGGGTCTCT-AAAATG--
gi|5 : AGATGGGTGGAGGAGAGCGAG-AAATCCACTAAATATTTCTGT-AACCTAGAA--TCTAGAAACACTCCTTAA--AAACAA--TCAAAAAAGGGTTAAAACTATCGAAAAGGTAATG-ATTGATACTCATTCGGA-CATgtgcgttcgattatttactaaatttattatttctcttgaaatgttcatggata
gi|5 : cacgatcaTG-AACGTGAAATTTG-T-TAGCGT--TA-AAGAATATG-----AAA-AACAACAAA-TCAACCGGGA--AA--GATGG-ATTTA--CAGCAG-AATTT-TACAAGTTCGTTT---GGAATGAAGCTATTTATTAAAGATGTAAA--GATCTA---TATTACA--AAAG-CACT-TCA-T-CATATATTTCAGT-GTAT-ACATTTGCCA-GCATCACAAAGACT-TGAGATTA--TACTATGTTAACACAAGGGAGAT-AAAGC-AGAG---AGTGTT---AAAAA--T-GGCGACC--AATAA---CT---C-TT-TT--A---AA-A-TATTTCTGCA----------C--G-G---TGCTTTTA---AC--A-AATTA--------TACTTCTgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggtgaacgtgaaatttgttagcgttaaagaatatgaaaaacaacaaatcaaccgggaaagatggatttacagcagaattttacaagttcgtttggaatgaagctatttattaaagatgtaaagatctatattacaaaagcacttcatcatatatttcagtgtatacatttgccagcatcacaaagacttgagattatactatgttaacacaagggagataaagcagagagtgttaaaaatggcgaccaataactcttttaaaatatttctgcacggtgcttttaacaaattatacttctttctatctggtctt
gi|6 : cacgatcaagatgggtggaggagagcgagaaatccactaaatatttctgtaacctagaatctagaaacactccttaaaaacaatcaaaaaagggttaaaactatcgaaaaggtaatgattgatactcattcggacatgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-CATAAAA--GGT-AT-----TGTG--A----TT-AACGA----------TAA------AATA-TAA-ACAATC-TCA---GTATGCTGA-CG-AC-AC-T---TC----TCTTGCTCTTGATGGTACTCTTAAGTCCTT--ATTCGC----TGCCCTT-GA-TA-CTATT-GAT-TTTTT-CTCAAA---A--TTCT-CAGGACTAAAAAATA--AA---TATTTC--AAAAAC-TAA-AATTAT-CT-GGATTGAATAAAAAAAAAAAATCTCGGAT-G-AAGT-ATTTCA-TCA-TT--CGA--GAT-GGAA--GCTGGACTG-GGG--ATGCGCTG--A-T-T-TCAATC-TAT-TAGGA-AT-A-TATT--TT-TC---GGTAGA-ATT--AG-ACAAA-ATTATG-GAACT-----AAAGT--AT----GGA--ATT-CAGATA--CCA-AA-AAGAAAA---GATG-TGATACAAC-A-GTG-GAGAAGAA-GGATTCTA----A--C--AC----CAATA-GGTCGG-GTA-ACAG-TTG-TT--AAG--ACACT-ACTTAT-C--CCA-AAACTTAATC-ACC-TTT-TTAT--T----TCT--C-TACCAAA--CCCT-AAA-AAAG-AGA---------A-TATTTC-ATCATTAAGTAAAGAGTTT----TTTC---AATTCATC----TGGAATGCTGA--ATCAGATA-AAGTC-AA-AAGAAC-AACTG-----------A-G-A-TTATTTGAAAGGGGGT-CTTA-AAAttctatctggtctt
gi|7 : AATGGAATGCGGAAA---AT-TC-CACGT-C-TT-CTAGT--T-T-AATT--GATT-TTGAGAAGGCTTTTAA--CT----------TGG-T-CCTTCAG-ATATAAA-GC---T-TTC----AA--GTAA----TTTGGTTTCGGA-T--A--ATATT-T-CATT-----C--AAT-AGATAAGATATT-T-TAAGA-CA--CAGATA-T-C---AGAG---CTTTCAT-TTTACA-AGA----GTAGAGTT--TTA-TCAG-CA--TA---GTT-AGATATAC--AA---ATG-GTAT-GTAGA-AA---------------TG-C-----A--CCATATTT----ATTT-------CTCATATG-----TGC-T---GGAAT---TC-------------------AA-A-CA-AAACAA--AA--A-TATAAAA--GAC-ATA----TGTTCAG----TGTATTGA----------AAACAC-AGAACA-TGA-TATATCGCCATATATATGCAGA-AT-AT-AC-T---TCA---G-TAGCTCTTCATGGTTTAACTGCATCCCTGGTATTGG----TG--TTT-GA-TA-CAATA-GAA-TTTTT--TG-TACAGT--TTTT-CTGGTCT-AAAGATT--AA---T-TCTT--CTACAC-GAATAGTGGT-CT-GGATTGATT---AAAAAAAA--TTCAGAA-C-CAGT-TTTTCA-TCA-TA--GAA--GAT-GGAA--ATTGGATT--GAG--G-GTTCTT--AAT-A-TCTAACTTAT-TGGAT-AT-T-CAAA--TT-TC---TGTTG--Atggt
gi|8 : cAGGA-T-TA-CTTGTGCA-C-A--TA-GAAT-TTGAAAAAGCTTTCGA--CT-CCA-TATCTTGG-A-AGTTTAT-CTAGAAA-GT---A-CTT----AA--TTAC----TTTGGATTTGGG-G--A---TAATAT-AATT-----A--CAT-GGGTTA-AAATT-T-TAA-A-TA--CAAACAAT-----AAAG---CATCTGT-ATTACA-A-ATTAAGCGGTTTC--CTT-TCAG-AA--CA---AAT-TGAGATAC--A-GAGA-G-GTTG--CAGACAA-GG-AG-ACCCTA-TCG-C-----A--CCATATTT----ATTTA------TCC---TATG---TGC-A---GAAAT---TCTAG-CTATT-CT-TG-T-CAA-G-CA-AAATAA--AG--A-TATTAAA--GGT-ATAA---TG----A----TG-AATGA----------TGA----AGAGCA-CAA-AATCTC-CCA---ATATGCAGA-CG-AC-ACAT---TT----T-TGGCTCTAGGTGGTTCCCAAAAATCTCT--TTTTGC----TGCTCCT-GA-TA-CAAT--AAA-TTATTACTT-TA---T--TTTTTCTGGATT-ACAAATA--AA---TAGCTC--AAAAAC-AAA-AATAGT-TT-GGACAGGCT---CTAAAACATTTCCTAAA-G-AAGT-ATATCA-CCA-TA--CAA--GAT-GGAA--
gi|9 : AA-ATTGAA-GATAT-----AAATTTTA-----GGA--ACT-CAAATT--CCTTAA-AATTGTT---TCTC-TCATTGAACGA-GTG-GAAGAGAA-GAA----ATTCTAT-T--A-TCCTTACTCTGGTCGG-GTACACTG-TGA-TTAAAA----CACTTGCTTAT-T--CCA-AAATTAAATC-ATTGTGT-TCATAAT--C-TCTTGC-TACT-----CCTT-ATA-AAAGTAC----------A-TATc
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): GCTTACTAATCAGAATGTCATAAATCTTGGGATTAATATTTTTTTTGCTGTGTATGGAAATGATATTCTTATGAAGTTATTATGATTTTGGAGATAGTTTTTATGATCAGAAGATGTTTCTTAAGGAAAAAA
Unaligned ( gi|28 ): TCCCTACTTCCAAACGGGATACAATTTCATACTTATAAATTCAAAATTTTATTTCGATTCTTACGGAAATCTAATAGTTTATGGTAACACAAGACTATCTATC
Unaligned ( gi|29 ): CTTGAGCAGAAAGAAATGAAAAGTGGTCTATTTCATGCCATGCTTTGGATG
Alignments
lowQualScore : 1 22 1 222 11 1 22 222 11 222 1 1 222 222222 222 2222 1 1111111 22 1 2222222 11 1111 1 11 111 44444444444444 11 11 111 222222 111 111 111 11 222222222222222 1 111 111 2222 2222222 111111 11 22 22222 1111111111 1111 22222 1 1 222 3333333333333333333333 22222222 111 3333333333333333333 11111111 111111 444444444444444444 11111 111 2222222222222 22222 111111111 333333333333333333 111 222222 11 1111 1 1 222222 1 11 1111 11 11111 111 11 1111 1111 33333333333333 11111 11111 22222222 11 111 444444444444444444444444444 11 11111111 111111 22222222222222 11 4444444444 33333333333 1111 2222 11111 11 3333 111 22222222 11 11111 33333 11 3333333333 222222 11 1 2222222 1 1 1 111 2222222 11 11 111 1 111 222 3333 1 1111 222 1 1 11 1 1 1 11 222 1 1 1 1 11111111 2222 1 2222 1 1 1 1 1 111 1 11 1 1 1 1 1 1 2 1
lowQualScore : 2 00 3 1 555 1 88 1 3 55 555 88 222 1 1 5 1 1 1 5 111 999999 1 111 2222 1 6 0 0 2222222 33 0 0 2222222 6 6 22 2 999999 6 2222 6 3 1 00 444 77777777777777 8 00 11 1 444 666666 99 1 8 444 777777 6 6 77 1 8 8 0 6 6 8 3 1 88 6 000 000 99 5 0 000000000000000 66 5 888 5 3 3 5 5 66 222 777 0 66 888 0 3 2 5 5 1 4 5 5 1 6 3333 1 5 4444444 222222 5 888 33 1 7 1 5 0 00 00000 2 5555555555 888 55 5 3333 4 1 555 66666 4 0 66 4 3 4 3 0 444 1 333 4 3 777 7777 1 5555 7777777777777777777777 7 1 3 2 3 7 3 88888 33333333 111 1 4 4 4 8888 1 1 55 55 4 55 777 4 1 1 4444444444444444444 0 6 3 3 7 3 3 77777777 000000 999999999999999999 00000 000 2 0000000000000 3 3 3 3 55 55 4 555 4 00000 888888888 66 4 555555555555555555 4 4 1 4 333 1 4 4 4 88888 222222 1 1 11 1 11 0000 0 5 5 5 55 66 2 66 444444 0 0 0 44 5 66 777 9 66 55 4 1 4 4 1 1 00 1 2222 11 777 99 4 4 777 66 4 66 1 00 44444 222 4 4 33 4 66 3333 66 5 6666 1 44444444444444 5 22222 44 77777 11111111 66 5 2 66 00 5 000 66 7777 555 5 1 5 555555555555555555555555555 66 55 5 1 5 77777777 5 0 888888 5 1 5 6 1 6 99999999999999 3 99 00 1 6 6 5555555555 6 22222222222 1 1 7777 5555 88888 8 99 1 77 77 8 2222 999 3 55555555 8 8 44 2 55 6 55555 66666 33 5555555555 777777 33 0 1 88 3 3333333 0 0 0 0 2 0 777 4444444 2 00 33 111 0 111 0 444 0 8 0 3333 0 8 8 0 4444 777 0 0 44 0 88 0 9 0 0 33 2 666 0 0 0 3 0 33333333 5555 0 1111 2 3 0 0 1 5 0 0 000 3 44 3 3 6 3 3 6 3 2 6 1 3
lowQualScore : . .. . . ... . .. . . .. ... .. ... . . . . . . . ... ...... . ... .... . . . . ....... .. . . ....... . . .. . ...... . .... . . . .. ... .............. . .. .. . ... ...... .. . . ... ...... . . .. . . . . . . . . . .. . ... ... .. . . ............... .. . ... . . . . . .. ... ... . .. ... . . . . . . . . . . . .... . . ....... ...... . ... .. . . . . . .. ..... . .......... ... .. . .... . . ... ..... . . .. . . . . . ... . ... . . ... .... . .... ...................... . . . . . . . ..... ........ ... . . . . .... . . .. .. . .. ... . . . ................... . . . . . . . ........ ...... .................. ..... ... . ............. . . . . .. .. . ... . ..... ......... .. . .................. . . . . ... . . . . ..... ...... . . .. . .. .... . . . . .. .. . .. ...... . . . .. . .. ... . .. .. . . . . . . .. . .... .. ... .. . . ... .. . .. . .. ..... ... . . .. . .. .... .. . .... . .............. . ..... .. ..... ........ .. . . .. .. . ... .. .... ... . . . ........................... .. .. . . . ........ . . ...... . . . . . . .............. . .. .. . . . .......... . ........... . . .... .... ..... . .. . .. .. . .... ... . ........ . . .. . .. . ..... ..... .. .......... ...... .. . . .. . ....... . . . . . . ... ....... . .. .. ... . ... . ... . . . .... . . . . .... ... . . .. . .. . . . . .. . ... . . . . . ........ .... . .... . . . . . . . . ... . .. . . . . . . . . . . .
lowQualScore : 0 00 3 0 777 0 33 0 3 33 777 00 000 0 0 5 0 0 0 5 000 555555 0 000 5555 0 7 0 8 5555555 88 0 8 7777777 7 7 00 2 555555 7 2222 7 3 0 66 000 00000000000000 8 22 00 4 000 000000 44 0 0 888 111111 7 7 77 0 0 0 8 0 0 0 7 0 00 6 000 444 66 0 5 000000000000000 99 0 888 0 1 9 0 0 99 222 999 5 99 000 1 4 8 0 0 7 0 7 7 0 7 3333 0 7 3333333 777777 4 333 33 0 3 0 7 7 00 11111 1 6666666666 888 11 0 1111 4 3 222 44444 4 7 11 4 3 4 7 3 222 0 999 0 6 000 7777 0 3333 4444444444444444444444 3 0 6 6 6 3 6 55555 44444444 000 0 0 0 0 5555 2 0 55 11 0 55 000 0 4 4 3333333333333333333 8 5 6 6 4 6 6 44444444 333333 555555555555555555 55555 000 3 5555555555555 3 3 3 3 00 55 0 999 0 66666 333333333 33 4 666666666666666666 4 4 0 4 999 0 0 0 0 77777 444444 0 0 11 2 99 6666 0 0 0 9 44 00 4 33 666666 0 8 8 44 0 11 888 7 11 88 4 0 4 4 0 0 66 0 7777 99 222 99 4 4 111 11 4 11 0 66 44444 666 4 4 00 4 00 2222 99 0 4444 0 66666666666666 0 11111 99 55555 00000000 99 0 2 99 55 0 000 77 7777 999 7 0 7 111111111111111111111111111 44 00 7 6 7 00000000 7 4 333333 7 0 7 7 0 7 55555555555555 5 22 22 8 7 7 0000000000 7 88888888888 4 0 0000 8888 00000 0 22 0 66 00 0 2222 222 8 00000000 0 0 66 5 88 7 88888 88888 88 2222222222 555555 88 5 0 00 2 0000000 8 2 0 0 5 0 555 8888888 5 22 22 000 5 000 2 000 8 0 8 0000 8 0 0 0 8888 000 0 0 22 0 88 8 2 0 0 88 5 555 0 0 0 2 0 88888888 5555 0 8888 5 2 0 0 0 5 0 0 000 3 00 3 3 7 3 3 7 3 0 7 0 3
consensus : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTT-AAC-AAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AA-T--AC----NCTT--T-TA---AATG-TACTTATACAA-ACT-TATATC--GGG-NTGTCTT-AGCTAC--AGAAT-T-AAATCTACTTCTNGA-TTAT-TTAATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--G-A--GAT--AC--ATAGG-A-GAA-AATACNAGATTTATNT-ATGATCTCGATG----TCTTNCACTGAAATGGACT----AAT---AT-TC-CAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-T-CNTTTATTCTATAAA-GTT-TTAAA--CTAT----TTTGGNTTTGGG-G--A--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAA-GG-GGGACCCTG-TTG-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-ATA----TGT---A----TG-AACGA----------NAA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-T---TC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GA-TA-CNATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACTANAAA-TA--AA---TANCTC--AAAAAC-AAA-AATNG-T-TTGGATNGGNT--CNAAAAAAT---TTTCNGAA-G-AAGT-NTTTCA-CCA-TN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--A-TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTACACAG-TTG-TTAAAAG--ACAC-TGCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCNCTAAGTGAANAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAA----G-TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
Reference ( family-2981 ) : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTT-AAC-AAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AA-T--AC----TCTT--T-TA---AATG-TACTTATACAA-ACT-TATATC--GGG-NTGTCTTNAGCTAC--AGAAT-T-AAATCTACTTCTNGA-TTAT-TTAATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--G-A--GAT--AC--ATAGG-A-GAG-AATACNAGATTTATNT-ATGATCTCGATG----TCTTACACTGAAATGGACT----AAT---AT-TC-CAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-T-CNTTTATTCTATAAA-GTT-TTAAA--CTAT----TTTGGNTTTGGG-G--A--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAA-GG-GGGACCCTG-TTG-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-ATA----TGT---A----TG-AACGA----------NAA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-T---TC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GA-TA-CNATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACTANAAA-TA--AA---TANCTC--AAAAAC-AAA-AATNG-T-TTGGATNGGNT--CNAAAAAAT---TTTCNGAA-G-AAGT-NTTTCA-CCA-TN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--A-TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTACACAG-TTG-TTAAAAG--ACAC-TGCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCNCTAAGTGAANAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAA----G-TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
gi|1 : AAATGGGTGGAAGA-AGGGA--AAACCTAGTAAATATTTCTGT-GCTTTAGA---TCTCGTA--ATTTTTT-AATTAAATA---TCAAAAAAGG--TAAAAC-A-CAAGAAGTCGAGGTATTTATAACCAGTTGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAG------TTCAAAATTCTCTGGA----TAAAGTAATCTGAAAAGTGAAATTTT-TACAA-GTC-TG-AAAAA-A-G-----AAA-AATTACAAA-TCCACCAGGA--A-T-GATGG-ATTCA--T-GTTG-AGTTTCTTTAAG-TTTTTT---GGAAGG--------------A-ATC--AA--GAAATA---TGT---A--GAAG-TGTT-TAATT-CAAATTTTTAAGA-AAAG-GAGCTT-CCA-ATATCACAAAGACT-GGA-TTTAATCACT-TGTTTGCCAAAAGGTGA--AAACCTAGAC---AATTTC-TGAAAAATTT-GGCGTCC---A-T--TC----TCTT--T-TA---AATG-TGCTT-TGAAA-ACT-TATATC--GGGCCTGTCTTTTACTAC--AGAAT-TAAAATCTACTTCTTGA-TTAT-TTGATATCGG-ATT-GTCAATC-T--G-TTTATA-AAGG--G-T--AAT---C--ATAGT-A-GAT-A--ACAAGATTTGTGT-ATGATCTCAATG-----CTTTCACT-AATTGGACT----AAT---ACATC-CAGGA-TACA-CTTGTGCT-CTA--TA-GATT-TTGAAAAAGCTTTCGA--CT-C-A-TATC-TGG-A-AGTTTATTCTATAAA-GTTCTTAAA--C-------CTTGTATTTGGGCG--A--ATATTATAAATT-----A--CAT-GGGTTA-AAATT-TCTAA-A-TATTCAAAC--A-T---AAAG---CATCTGT-ATTACA-A-A----GCGGTTCC--TTT-CCAG-AAAGCA---AAT-TGATATAC--AAGAGA-GCGTTG-GCAGAC-A-GG-AGAACCCTA-TCG-C-----AATCCATA-TT----ATTT-------TCC-T------TGT-C---GAAAT---TCTAGTCTATT-CT-TG-T-CAA-AGCA-AAATAATGAG--A-TATTATG--GAT-A-A----TG----A----TG-AATGAG---------GAA----GGAGCA-CAA-AATCTC-CCA---ATAT-CAGA-CG-AC-AC-T---TT----T-TGGCTCTGGATGGTTCCCCAAAATCTCT--TTTTGC----TGCTCTT-GA--A-CAAGT-AAA-TTATCACTC-TA---C--TTTT-CTGGATTACAAA-TAGGAA---TA-CTC--AAAAAC-AAA-AATAG-T-TTGGATAGGCT--CTAAAAAAT---TTTCTAAA-G-GAGT-A-TACA-CCA-TA--CAA--AGC--AAA--GCTAGAGT--GGG--AT-TACT---ACTAT-CCAATCTTAT-TAGGC-AT-A-GAAT--TT-TC----GTGG--A-TA--TGAA-AAA-ATAGTG-GATTA-----AAAAT--AC----AAT--ATT-CA-ATA--CC--AA-AATTAAA---GCTT-TGATAC-AC-ATCTG-GAATAGAA-GAA----A----AC-C--ACTCCTCATT---GTCGA-GTCCACAG-TTGCTCAAAAGACACAC-TGCTT-T-A--CCGTAAGCTTAATC-ATT-TGT-TTAT--TGGC-ACT--A-TACCAAAATTCC------AGAG-AG----------A-TACTT--GTCTCT--CTGAATAGTTTGTTCTTTTTCGAATTTATA----TGG-AT-TCAAAGATT-GACATAGGTT--ATAAAGACAAAC-GT--TACTGGCAA-GAACCGACTT--AAAGTGG--CTTA-AAAATG--T--GAGTGTTGATAAA--ACTTTT---TATAGCATCTTTAAA----G-TAC--ATGCGATAAAAGGGTTAACAAACT--G-TCATTCAAAAC-CATGG-TTAGATATTTTT---CTTTGAAAT-AAT-GCATA-AATGGTGG-T-AC-AAA-T-TGTT--GATTTTGGTGATGATATAT----TT-A-AATGG-T-TATGAA--TCACAGTA--AAGATTTTGG-CAT-GAATG--TTTCCAGTCATTGGTTTGTC-TCCTTTA--AAACAATG-TGGA-TA-AAAA-TC--TCAAGTTC--AAT-T-TTATCGTTCT-GTCCC--A-TATGGT-TAATATCATAATCTC-GT-GTT-GGAAATAAGAGTATTTATG-TTAAAAAATGGCAT-CT-CATGGGTGTG-AAAATAA-TT-GCG-ACTT-TTTAGTATGATGATTGGAAA
gi|10 : cgggctGGTGATTAAACCTAAAC---AATTTT-TTAAAAAACT-GGTGACC--GATT--AC----ATTG--T-TA---AATG-T-CTTATATAA-ACT-TATTTC--AGG-TTGTCTT-AGTAAA--AGAAT-C-AAATCTACTT-TAGG-TCATCTCAAT-TCAG-ACA-CCCAGTC-TG-GATTCATG-AAGG--GAA--GAT--AT--ATTGG-T-AAA-AATACCAGATTTATCT-ATGATCT-AATG----CATTATACAGAAA-GTAAT----AAT---AT-TC-CAGGA-C-TA-TTGGTATT-G-A--TA-GACT-TTGAAAAGGCTTTTGA--TTCC-A-TTTCATGG-T-CATTTA-TATATAAA-GTA-TTGAA--ATAT----TTTGGATTTGGT-G--A--ATAC-AT-TATT-----G--AAT-GGGTAA-AGATTCT-TAA-
gi|11 : gttacacaacaacttaaatactcTCTG-AAAGTGAAATGTTGTACAGTCT--TGTAAGGATA-G-----GATTAATAACAAA-TACACCAGGA--AGT-GATAGATTTCAACTATTTGGAATTTGTTAAAGTTTTTTTTTTG--AGG--------------ACATCAGAA--GAATTAATTTGT---G--AACG-TGGT-TAAT--CACATTTT-AAGATAAAGAGAGCTT-CCA-ATCTCACAAAGACG-GGG-AT--ATCACT-TGTTT-CCAAAAGGTGAT-GAACCTCGAT---AATTTTCTGAAACATTTTGGCGTCC--AA-T--TA----TCTTCTT-TA---AATG-TGCTTGTACAA-ACTATATAGC--GG--ATGTCTT-AGCTAC--AGAATAC-AAATCTACTCCTTAT-CTAT-T
gi|12 : TG-AAGG--G-AA-GAT--ATCTATAGG-G-GA---ATACTCGATTTATTTTATGAGATT-ATG----TCATACACTGAAAGAAACA----GAT---AT-TC-CAGGTCT-TC-TTAGTACT-C-A--T--GATT-TTGAGAAGGCCTTTGA--CT-C-AATGTCATGG-T-CTTTCATT--ATAAA-GTT-TTAAA--CTAT----TTTGGTTTTGGG-A--A--A-ACTTT-A-TT-----C--AAT-GGATAA-AGATT-T-TAA-A-TT--CAATT--T-C---AGAG---CTTCAAT-TTTAC--A-A----GTGGATTT--TTA-TCAG-AA--CA---GTT-CGACATA-----------------AC---CAA-AG-GGGTCCCTA-TTA-C-----A--CCATATTTATTCATTT-------TAT-G------TAC-C---GAAAT---TCTTG---------------------------CAA--AG--A-TATAAAG--GGT-ATA----TGT---A----TA-Agatacgat
gi|13 : TTT-CAGGTCTAAGGA-TA--AA---TTTTTC--AAAGAC-AAA-AATGG-T-GTGGATAGGTA--GTAAAACAT---TTTCAAAG-G-AGGT-TTTCCA-TCA-TT--CAA--GGT-GGAA--ATTTGACT--GGA--A--CAATGAAACA-T-TGGAT-TTAC-TAGGG-AT-A-AGAT--TCAAC---AGTAA--C-TT--ACAA-GAA-ATGGTT-GAAAT-----GAATT--AT----AAG--ACT-AAATTA--AAG-GA-AATTAAAAAGGTTA-TGAT---GC-A-GTG-GAATAGTA-GAA----A----TCGT--ACTCCT--TTA-GGAAGG-CTA-ACAG-TAA-T--AAAG--ACA-------------CCA-AAATTGAATC-AC
gi|14 : agttctccaacttctatggatgacattattagagtcctagattacttggcaataaT-CTAAA--ATAT----TTTGGTTTCGGG-G--A--TTA-TAT-G-TT-----A--GATTGGATTA-AGATT-C-TAA-A-TA--CATAT--TTC---AAAG---CTTCGGT-TCTACA-A-G----GTGGTTTC--CTA-TCTG-AA--CA---GTT-CAATAT-T--GAACGT-G-GTTG--CAGACAA-GG-GG-ATACTG-TTG-C-----A--CCATAT------ATTT-------TTC-TCCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAA-A-CA-AAACAA--AT--A-TATAAAA--GGT-AT-----TGT---AATTTTA-AACGA----------TAA----AGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AT-AC-C---TC----TCTTGCTCTTGATGGTACTCCTAAGTCATT--ATTCGC----TGCCCTT-GA-TA-CTATT-GAT-TTTT
gi|15 : TTTATGT-ATGACATT-ATG----TCATACACTGAAATAAAC-----AAT---AT-TC-CAGGT-C-TT-CTAGTACT-C-AT-T--GATT-TTGAGAAGGCCTTTGA--CT-CAA-TGTCATGG-T-CTTTCA-TCTATAAA-GTT-TTAAA--CTAT----TTTGGTTTTGGG-A--A--CAAAAAT--ATT-----C--AAT-GGATAA-GGATT-T-TAA-ATTC--CAATT--T-C---AGAG---CTCCGAT-TTTACA-A-A----ATGGATTT--TTA-TCTG-AA--CA---GTC-CAACATAC--AA-AGA-G-GGT--GTAGAC-A-GG-GGGACCATG-TT--------------TATTC----ATAT-------AAT-G------TGC-C---GAGAT---TCTTG-C-AAT-AT-TAAT-TAA-A-CA-AAACAA--
gi|16 : -AAAG-GAGCTC-ACT-ATTTCATAAAGATT-AGG-AATAATCTCA-TGTTTGCCAAAAAGTGAC-AGACACGGACACAAAATTT-TGGAAAAC-T-GATGTCC--TA-T--AA----CATT--CGGA---AATG-T-CTTATGTAA-ACT-TATATA--AAA-ACGTA-TAAGCTAC--GGAAT-T-TAATATAC-GCTAGA-TTAT-ATAATATCAG-GTA-CTCAAAC-TGTC-TTTCTGAAAGG--A-A--GAT--GC--AT--G-A--AA-AATA
gi|17 : ttttcttttttttgggggggggggggttgatttttaaaatattcatagtacaaagaataaataacatatatattcc-GATTTTGGTGATGA-A-ATAGTGTTAA-AATG--T-GATG-AATCCACAGTAT-GAG-TTTCGG-CACTG-ATG-TTTTCCAGTC-TTGG-TTGTC-TATGGTG--AAACAA-GATGGAATATATAA-TCATTC-AGTTCAAAATATGTT----TTCT-GTTCCCAG-TATG-TATAATA-CA-AATATC-GT-GTTTGGAAATAAA-GTATTTATG-TTAAAACATGGCA-GCTCCAT-GGTGTGAAAAATAA-TTGGCG-ACTTCTTTAGAATGAGAA-TGGAAAaaa
gi|18 : GA-TG-AT-AC-A---TCAT--C-TTGCCCTTGATGGGAATC-TAAGTCACT--TTTT------TAGCTTTAGA-TA-CGTTTAGAG-TTTTTTCTC-CA---AAGCTTT-CTGGTTTTAAGG-TA--AACTGTACC-----AAAAC-AAA-AATTGTT-TTGGATCGGAT--CAAAAAA-----TTTCAGAT-C-TGGTCTTTTCA-TCA-TT--C-A--GAT-GGAA--ATTG--CT--GGG--CT-CAACA--ACT-T-TTAA-CTTAC-TAGGgt
gi|19 : gcgcG-T-CTTTTGTT-TATAAG-GTT-TTAAGGTTTCT----TTTTAATGTGGT-ACAA--ATACGAT-AATTTTATAA--AATTGGATGA-A-ATT-T-TAA-A-TA----ATT--T-T---AAAG---CTTCTAT-TCTTCA-A-A----GTGGCTTT--TTA-TTAG-AA--GA---ATT-T--CAT-------TGA-T-GTCG-TC-----A-GG-GAGACCCTG-TTT-C-----T--CCGTA--C----ATTT-------TTC-TTCTTTGTGC-A---GAAAT---TCTTG-CAATT-CT-C-AT-TAA-A-CA-AAAccaaaactaatataggtttttt
gi|2 : TGGATAGGGGAAGGGGAGGAAACCTTCGAAGTACTTTTGTAGGTCTCGAATTTCTAGGA--ATTATTTAAAC-AAATAACTTTAAAAAAGtcatgat
gi|2 : tatgataagatctcgtgctcgccAAGTTA---GACAGGCATTATCCACAAT---CTGGAGGGGTGAAATTAT-TA-GAGGAGAGGTTCT-TA-ATTGTACTA-AAAAATA-ACATGAAAA-AATAACAAAATCTTCCTAGAGTAGCCGATGG-TTACA--CAACAG-AATTC-TTCAATTTTTTTT---GGAATG--------------ATATTAAAA--TATTTA---TGT---TGTAAAG-AGCCATAAAT-TGTATTTTTGTAA-GAGG-AAACTT-CCCTACTTCACAAAGACTAGGA-ATTATTT-CT-TGTTTACCTAAAGGTGAC-AAGCCAAGAC---AGTTTT-ATAACAA-TT-GGAGGCC--AA-TTTAC----ACTT--T-TA---AATGGTACT-ATACAACAAT-TATATTCTGCG-TTGTCTT-AGCTACTCAGAAT-A-AAAAAAAGTTTTGGAATTAT-TTAATATATG-ATA-CACAGTC-TG-GGTTTTTG-AAGG--A-A--GATTAAT--ATAGGGA-GAG-AATACTCGATTTATTT-ATGACATGTATG----CATTACACTGAAAGGAAAC----AAT---AT--C-CAGG--T-CATCTAGTACTTC-A--T--GATT-T-GAGAAGGCCTTTGA--CT-C-A-TG-CATG--T-CTTTCATT-TATAAG-GTG-TTATA--CTAT----TTTGGTTTTGGG-G--A--A-ACTTT-A-TTCC---A--AGT-GGATAA-AGATT-T-TAA-A-CT--CAAAT--TTC---AGAGG--CTTCAAT-TTTACA-G-A----GTGGATTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAAAGA-G-GGGGTGTAGAC-A-GG-GGGACCCTA-TTG-CCA---G--CCATATTT----ATTCATATTTATGC-T------GGC-C---GAAATA--TCTTG-CCAATAGT-TAAT-TAAGA-CA-AAACAA--AGGTA-TATAAAG--GAT-ATA----TGT---A----TA-AA--A----------AAACACTGAAACA-TAAGGTTATC-ACAAT-ATATGCAGA-TGAAT-AC-T---TCCCCAC-TAGCCCTTGATGGTTTCACAAtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacaatactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|2 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgtt--AA---TA-CTCCTAAAAAC-TAA-AATTG-T-TTGATTTGGTTTGCAAAAAAAA---ATTCTGAA-CCAAGT-TTTCCA-CCA-TTACCAA--GAT-GGGA--AATAGATT--GGGTGATCAACAA--ACC-T-TTAAT-TTAT-TAGGT-AT---TAATGTCT-TT---GATCG--A------GAA---A-ATTGAA-GATTTT----AAATT--TTT---GGA--CTC-CAAATT--CCT-AA-AATTGTT---GCTC-TGATTAAAC-A-GTG-GAGGAGA--GAATTC-A----AT-T--ACTCCT-ATT--GGTCGG-GT-CACTG-TGA-TTTAAA----CCT-TGCTTAT-TTGCCA-AAATTAAATC-ATT-TGT-TCATA-T--C-TGT--CGTTCCTAC--TCCT-AAA-AAGG-AGGACAATTTCAA-TATTT--ATGCC-------AAAATTT----TATTCG-AATTCTTG----TGG-AAGTCTAGTGT-AGATA-AAGTC---CAAGAG---GTCGTAATAAC-CCAA-G-ACATATCTTATCAGTG-----TATAAGATG--T--AGGTA----TAAACCAACTTTAATTAT---ATCCCTGAA----GATGCTCATG-GATTAAAAGGCTTACTAAGTCAGATTGTCATAAATTCTTGGATTA-ATA-TTTTGTGCTGTG-----TATGGAAATGAAT-ATTC-TTATGAAG-TATAT---GATTTTGGAGATAT-TTAT----TGAAGAATGG-tactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|20 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacGAAAGCTGG--CTTA-AAATGG--TTGGAGTG------AA--AACGTG---TAT---ATTTTTAAA----T-TAC--ATATGATCAAA-CGTTAACAA-CT--G---GTTACAAAC-CATGG-TTAGATA-TTTT---CTTTG--ATCC-TGGCAAC-AA--GTGG-T-ACAAAATT-TGTTA-GATTTTCGTGATGA-ATATG---TTAA-ACTGG-TATATG-A--TCATAGT---GAT-GCTTGG-CAA-G-ATG-TTTT-CAGTGATgttttgcaaggaaaaaaatgagca
gi|22 : CAG-GG-GTGATCCTG-TTG-C-----G--CCATAT------ATTT-------TTC-TGCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-AT-----TGTG--A----TT-AATGA----------TAA----AGAACA-TAA-CTTATC-TCA---GCATGCTGA-CG-AC-AC-T---TC----T-gtt
gi|23 : TGCCTAAAGGTGAT-AAACCAAGAC---AATTTT-TAAACAAC-T-GGCGTCC--AATT--AC----ACTT--T-TA---AATG-TAC-CATACAA-GTT-TATGTC--GGG-TTGTC-CAAGTTTC--AGAAT-T-TAA-CAGGTCTTGGA-TTAT-ATAATTTCTG-ATA-cttg
gi|25 : aAATATG-----AAA-AATAACAAA-TCT-CCAGGT--AGT-GATGG-TTATA--GTGTTG-AATTT-TTAAA--TTTTTT---GGGGGT--------------AGATCTGAAAGAAATTA---TAT---T--AAAGTCAAT-TAATTGTATATTCTCCA-A-AAAG-GAGCTT-CCC-AT
gi|26 : CTAGAGTAGGGG--ATGTACTA--ACT-T-TCAA-CTTAT-TA-GC-AT-AGGAAT--TG-TC---TGTGG--A-GTAGAGAATAAATATAGTT-GATTT-----AAATT--ACAAATGGAGGGTG-CAGATACGCCA-AAGAGTTAA
gi|27 : -TTTTCCAGTCAT-GG-TTGTC-TATGGTG--AAA-AA-A-TGGA-TA-ATAA-TCATTC-AGTCCAA----T-TTATTATTTTTGTCCC--AATATGGTATAATA-CA-AATCTCTGT-GTT-GGAAgt
gi|3 : TACTTC--GC-TTAT-TTG-TATCGG-ATA-GTCAAGGGTT-G-TTTATA-AAGGTCG-A--CAT--AC--ATTGG-AAGAGTAATGCAAG-TTTGTGA-A-GATCTCG-TGC---TCTTTCACTGAATTGGACC----AAT---A---CACAGGG-A-TA-TTTGAACT-C-A------GTT-GTGAAAAAGCTTTCGAGACT-C-A-TATC-TGGAT-AGTTTAT-CTATAAA-GTT-CTAAC--CTATCTACTTTGGATTTGGA-G--A------------------------T-GGTGTA-AAATT-TGTAA-A--A--CAAAC--CAT---AGAGGAACATCTGTACTTACA-A-A----GCGTATTTCCTT--TCAT-AA--CACATATTGCATTATAC--CAGAG--G-GTTG--CAGACAA-GG-AGTATCCTA-TGA-CTAGCGA--CCATTTTT----GTTA-------TTC-A------TGG-C---AGAATGTATCTAG-CTATTTCT-TG---CAA-G-CGCAAATAA--AG--A-TATTAA---GGTGATA----TGT---A----TG-AATGA----------TGC----GGAGCAACAA-AATCTC-TCA---ATATGCAGATCT-ACCAC-A---TT----T-TGGCTCTTGATGGTTCCCCAAAATCTCT--TTTTGCGTTATGCTCTT--A-TA-C-ATT-AACACTTTTACTC-TA---C--TTTTTCTGGATT-CAAA-TA--AA---TAGCTC--CAAAA--AAA-AATAG-T-TTGGATAGGCTT-CTAAAACAT---TT-CT-AA-G-AAGT-ATATCA-CCA-TA--CAC--AATAGGAAATGCTGGAGT--GGG--ATGTACTT---CT-T-TCAAGCTTAT-TAGGGCATTG-GAAT--TT-CT---TGCCG--A-G---AGAATAAA-AT-GCAAGCTTTTTTCTAAATT--AC----AAT--ATTTCAGATA--CCA-AA-AAATAAA---GCTTATGATACA-----GTT-GAATAGAAAGAA----A----ACTC--ACTC-TCATT---GTCGG--CGCACAG-TTG-CCAAAA----CAC-TACTTTT-A--CCT-AAGCTTAATCCATC-TTTGTTAT--G--C-ACT-----GCCAAA--TTCA-AGATAAAG-AATA--------A-TGTCT---TCTCT---TGAATAGTTT----TTTT-----TTTATTACTATGG-A-ATTCAAGATT-GACA-GGGTT---CAAGA-CAAACTGT--TACT-CCAA-G-ATTCACTTGAAAAGTGG--CTTA-AAAATGGTT--GAGTG-----AAA--AACTT-----------CCTTTAAAGACTG-TAC--ATGTGATAAGAACGTTAACAAACT--GATC---ACAAAC-CATGG-TTAGATA-TTTT---CTTTTAAATCCATGGCAAC-AAT-GTGGCT-ACAAAA-T-TTTTGCGA-TTTGGTGATGA-ATATC---TTAA-AATGGTT-TATG-A--TCACAGTAATGAG-TTTTGGCCAT-G-ATGTTTTTCCAGTCATGGG-TTGTCGTATGGTGAAAAACAA---TGGA-TA-ATAATTCATTC-AGTTCAAAAGAT-TTA----TCT-GTTCC--G-TATCGTATAATA-CA-AATATCTGTCGTT-GGAAATAAAAA-GCTTATGTTTAAAACATGACATGCT-CAT-GGT-TG-AAAATAATTTGGCGAACTTTTTTAG-ATGAAGA-TGTAAA
gi|30 : -G-----AAA-AATAACAAA-TTT-CCGGGA--AGT-GATGG-TTTTA--CAGTTG-AATTT-g
gi|4 : atAAAAACCT-G-CGTCCCCAA-T--ACACTTTCTT--T-TACTGAATG-T-CTTGTATAA-ACT-TATATC--AGG-ATGTAT-AAGCAAC--AGAAT-T-ACATCTACCACTAGA-TTA--TTAATATCAGCGTAGCTCAAAC-TG-GCTTTCTG-AAAGCTG-AATGAT--AC--ATAGG-A-GAA-AACACTAG-TTTATTT-ATGATCTTGATGTTTTTCTTTCACAGAAA---GCT----AACCAAAT-TC-CAGGA-T-TA-CTAGTACT-T-T--TTGGATTCTTGAAAAGGCTTTTGA--TT-CAA-TTTCTTGG-TCCTTTTATT-TACAAACGTT-TTAAA--ATAT----TTTTGGTTTGCG-G--ATCATACTGT---TT-----ACGATT-GGATTA-GAATT-C-TGA-A-CA--CAAAT--T-CTCAACAG---CTTCGGT-TCTACATA-G----GTGCGTTT--CTATTCTGCAA--CA---GTT-CAAAATGTTGAACGTC-G-G-TG-GCAGACAACGGCGGCATCCTGTTTGTC-----A--CCATATAT----TTTC-------TCC-T------TGTGCTTAGCAA----TCTGG-CT-CT-CTCTGATGCAA-A-CA-AAACAA--AG--ACTATAAAATTGCT-ATCTTGTTGC---A----TT-AACGATTTTTCTTTTAAA----CGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AC-AC-TTCCTC----T-TCTCCTTCGAATGTACTCCTAAGTCTTTA-TTCCGC----TGCCCTTCGATTACCTATT-GAT-TTTTTTCTCAAA---A--TTCT-CAGGACTCCAAA-TA--AA---TACTTC--AAAAACTTAA-AATTA-TCTCGGATT-GAT--CAAAAAAAT---TCTCGGCATG-AAGTCATTTCATCCATTT--CGACCGAT-GGAA--GCTGGATTG-GGG--ATGCACTG--ACT-TCTCA--TTTATATAGGA-AT-A-C-AT--TT-TCGAGGGTAGACA-TT----AAC-AA-ATTACG-AA-CT-----AAATT--AT----GGA--ATT-CAGATA--CCA-AA-AATAAAA---GCTA-TGATACAAC-A-GTGCGAGAAGAA-GCC----G----AT-CTAACAC--CAATA-GGTCGGTGTA-ACAGCTTG-TT--AAG--ACAC-TACTTGTCC--CCA-AAACTCAATC-ACC-TTT-TTAT--T--CTCCT--C-TACCAAA--CCCTAAAA-AAAG-AG----------ACTATTTTCATCATTAAGTAAAGAGTTA----TTTC---AATTCATT----TGA-ATGCCTAACATCAGATA-AAGTCAAACAAGAAC-AACTGT--TA---CCAACG-ACCTATTTGAAAAGGGGGTCTCT-AAAATG--
gi|5 : AGATGGGTGGAGGAGAGCGAG-AAATCCACTAAATATTTCTGT-AACCTAGAA--TCTAGAAACACTCCTT-AA--AAACAA--TCAAAAAAGGGTTAAAACTATCGAAAAGGTAATG-ATTGATACTCATTCGGA-CATgtgcgttcgattatttactaaatttattatttctcttgaaatgttcatggata
gi|5 : cacgatcaTG-AACGTGAAATTTG-T-TAGCGT--TA-AAGAATATG-----AAA-AACAACAAA-TCAACCGGGA--AA--GATGG-ATTTA--CAGCAG-AATTT-TACAAGTTCGTTT---GGAATGAAGCTATTTATTAAAGATGTAAA--GATCTA---TATTACA--AAAG-CACT-TCA-T-CATATATTTCAGT-GTAT-ACATTTGCCA-GCATCACAAAGACT-TGAGATTA--TACTATGTTAACACAAGGGAGAT-AAAGC-AGAG---AGTGTT---AAAAA--T-GGCGACC--AA-TA-AC----TCTT--T-TA---AA-A-TATTTCTGCA-----------C--GG---TGCTTTTA---AC--A-AAT-T-A----TACTTCTgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggtgaacgtgaaatttgttagcgttaaagaatatgaaaaacaacaaatcaaccgggaaagatggatttacagcagaattttacaagttcgtttggaatgaagctatttattaaagatgtaaagatctatattacaaaagcacttcatcatatatttcagtgtatacatttgccagcatcacaaagacttgagattatactatgttaacacaagggagataaagcagagagtgttaaaaatggcgaccaataactcttttaaaatatttctgcacggtgcttttaacaaattatacttctttctatctggtctt
gi|6 : cacgatcaagatgggtggaggagagcgagaaatccactaaatatttctgtaacctagaatctagaaacactccttaaaaacaatcaaaaaagggttaaaactatcgaaaaggtaatgattgatactcattcggacatgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-CATAAAA--GGT-AT-----TGTG--A----TT-AACGA----------TAA------AATA-TAA-ACAATC-TCA---GTATGCTGA-CG-AC-AC-T---TC----TCTTGCTCTTGATGGTACTCTTAAGTCCTT--ATTCGC----TGCCCTT-GA-TA-CTATT-GAT-TTTTT-CTC-AA---AA-TTCT-CAGGACTAAAAAATA--AA---TATTTC--AAAAAC-TAA-AATTA-T-CTGGATTGAAT--AAAAAAAAAAAATCTCGGAT-G-AAGT-ATTTCA-TCA-TT--CGA--GAT-GGAA--GCTGGACT--GGGG-ATGCGCTG--A-T-T-TCAATCT-AT-TAGGA-AT-A-TATT--TT-TC---GGTAG--AATT--AGA-CAAA-ATTATG-GAACT-----AAAGT--AT----GGA--ATT-CAGATA--CCA-AA-AAGAAAA---GATG-TGATACAAC-A-GTG-GAGAAGAA-GGATTCTA----A--C--AC----CAATA-GGTCGG-GTA-ACAG-TTG-TT--AAG--ACAC-TACTTAT-C--CCA-AAACTTAATC-ACC-TTT-TTAT--T----TCT--C-TACCAAA--CCCT-AAA-AAAG-AGA---------A-TATTTC-ATCATTAAGTAAAGAGTTT----TTTC---AATTCATC----TGGAATGCTGA--ATCAGATA-AAGTC-AA-AAGAAC-AACTG-----------A-G-A-TTATTTGAAAGGGGGT-CTTA-AAAttctatctggtctt
gi|7 : AATGGAATGCGGAAA---AT-TC-CACGT-C-TT-CTAGT--T-T-AATT--GATT-TTGAGAAGGCTTTTAA--CT----------TGG-T-CCTTCA-GATATAAA-GCT-TTCAA--GTAA----TTTGGTTTCGGA-T--A--ATATT-T-CATT-----C--AAT-AGATAAGATATT-T-TAAGA-CA--CAGATA-T-C---AGAG---CTTTCAT-TTTACA-AGA----GTAGAGTT--TTA-TCAG-CA--TA---GTT-AGATATAC--AA---ATG-GTAT-GTAGA-AA---------------TG-C-----A--CCATATTT----ATTT-------CTCATATG---TGC-T---GGAAT---------------------T-CAA-A-CA-AAACAA--AA--A-TATAAAA--GAC-ATA----TGTTCAG----TGTATTGA----------AAACAC-AGAACA-TGA-TATATCGCCATATATATGCAGA-AT-AT-AC-T---TCA---G-TAGCTCTTCATGGTTTAACTGCATCCCTGGTATTGG----TG--TTT-GA-TA-CAATA-GAA-TTTTT--TG-TACAGT--TTTT-CTGGTCTAAAGA-TT--AA---T-TCTT--CTACAC-GAATAGTGG-T-CTGGATTGATT--AAAAAAAA-----TTCAGAA-C-CAGT-TTTTCA-TCA-TA--GAA--GAT-GGAA--ATTGGATT--GAG--G-GTTCTT--AAT-A-TCTAACTTAT-TGGAT-AT-T-CAAA--TT-TC---TGTTG--A-tggt
gi|8 : cAGGA-T-TA-CTTGTGCA-C-A--TA-GAAT-TTGAAAAAGCTTTCGA--CT-CCA-TATCTTGG-A-AGTTTAT-CTAGAAA-GTA-CTTAA--TTAC----TTTGGATTTGGG-G--A---TAATAT-AATT-----A--CAT-GGGTTA-AAATT-T-TAA-A-TA--CAAACAAT-----AAAG---CATCTGT-ATTACA-A-ATTAAGCGGTTTC--CTT-TCAG-AA--CA---AAT-TGAGATAC--A-GAGA-G-GTTG--CAGACAA-GG-AG-ACCCTA-TCG-C-----A--CCATATTT----ATTTA------TCC-TATG---TGC-A---GAAAT---TCTAG-CTATT-CT-TG-T-CAA-G-CA-AAATAA--AG--A-TATTAAA--GGT-ATAA---TG----A----TG-AATGA----------TGA----AGAGCA-CAA-AATCTC-CCA---ATATGCAGA-CG-AC-ACAT---TT----T-TGGCTCTAGGTGGTTCCCAAAAATCTCT--TTTTGC----TGCTCCT-GA-TA-CAAT--AAA-TTATTACTT-TA---T--TTTTTCTGGATTACAAA-TA--AA---TAGCTC--AAAAAC-AAA-AATAG-T-TTGGACAGGCT--CTAAAACAT---TTCCTAAA-G-AAGT-ATATCA-CCA-TA--CAA--GAT-GGAA--
gi|9 : AA-ATTGAA-GATAT-----AAATTTTA-----GGA--ACT-CAAATT--CCTTAA-AATTGTT---TCTC-TCATTGAACGA-GTG-GAAGAGAA-GAA----ATTCTAT-T--A-TCCTTACTCTGGTCGG-GTACACTG-TGA-TTAAA----ACACTTGCTTAT-T--CCA-AAATTAAATC-ATTGTGT-TCATAAT--C-TCTTGC-TACT-----CCTT-ATA-AAAGTAC----------A-TATc
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|21 ): CATCTCATTTTGGATGATACAAGGAAAGAATATGGAAGAGATTGCAAGATTCATTTCTGATTCAGAATTATAATAACTGGACTTTTAGTATTATTTGATTTGGAGGAAGCCTTTGATTCTATTCCTGGTCATATATTTATGAAGTACATGTATAAGAATTGTTTGGATTTGGAGAAAGTACGACGTCTTATTTACGGAGTAAAGAT
Unaligned ( gi|24 ): GCTTACTAATCAGAATGTCATAAATCTTGGGATTAATATTTTTTTTGCTGTGTATGGAAATGATATTCTTATGAAGTTATTATGATTTTGGAGATAGTTTTTATGATCAGAAGATGTTTCTTAAGGAAAAAA
Unaligned ( gi|28 ): TCCCTACTTCCAAACGGGATACAATTTCATACTTATAAATTCAAAATTTTATTTCGATTCTTACGGAAATCTAATAGTTTATGGTAACACAAGACTATCTATC
Unaligned ( gi|29 ): CTTGAGCAGAAAGAAATGAAAAGTGGTCTATTTCATGCCATGCTTTGGATG
Alignments
lowQualScore : 1 22 1 222 11 1 22 222 11 222 1 1 222 222222 222 2222 1 1111111 22 1 2222222 11 1111 1 11 111 44444444444444 11 11 111 222222 111 111 111 11 22 1111111111 1 111 2222 2222222 111111 22222222222 11111 1111 222222222 11111111 22 3333333333333333333333 22222222 111 3333333333333333333 11111111 111111 444444444444444444 11111 1111 2222222222222 11111111111111111 3333333333333333333 111 222222 11 1111 1 11 1 222222 1 111 111 11 11111 111 11 1111 1111 3333333333333 11111 11111 22222222 11 111 444444444444444444444444444 11 11111111 111111 22222222222222 11 4444444444 33333333333 1111 2222 11111 11 3333 111 22222222 11 11111 33333 11 3333333333 222222 11 1 2222222 1 1 1 111 2222222 11 11 111 1 111 222 3333 1 1111 222 1 1 11 1 1 1 11 222 1 1 1 1 11111111 2222 1 2222 1 1 1 1 1 111 1 11 1 1 1 1 1 1 2 1
lowQualScore : 2 00 3 1 555 1 88 1 3 55 555 88 222 1 1 5 1 1 1 5 111 999999 1 111 2222 1 6 0 0 2222222 33 0 0 2222222 6 6 22 2 999999 6 2222 6 3 1 00 444 77777777777777 8 00 11 1 444 666666 99 1 8 444 777777 6 6 77 1 8 8 0 6 6 8 3 1 88 6 000 000 99 5 0 999 5 11 1 7777777777 5 3 3 5 5 77 66 77 2 77 000 1 11 2 5 5 0 1 4 5 5 1 6 3333 1 5 0000000 000000 5 5 0 7777 1 5 1 5 1 55555555555 1 2 7 0 22222 8888888 4 1111 4 0 777777777 4 1 55 4 55555555 3 1 3 33 3 66666 7777 666 77777 1 3 44 5555555555555555555555 7 1 3 2 3 7 3 88888 33333333 111 1 4 4 4 8888 1 1 55 1 4 4 55 777 4 1 1 4444444444444444444 0 6 3 88 777 77777777 000000 999999999999999999 00000 2222 2 0000000000000 3 3 3 3 55 55 4 555 4 99999999999999999 66 4 5555555555555555555 4 4 1 4 333 1 4 4 4 4 999999 1 1 11 1 11 0000 0 5 00 55 66 2 66 444444 0 0 0 999 66 777 9 66 55 4 1 4 4 1 1 888 1 4 11 777 999 4 111 66 4 66 1 00 44444 222 4 4 33 4 66 3333 66 5 6666 1 4444444444444 5 22222 44 77777 11111111 66 5 2 66 00 5 000 66 7777 555 5 1 5 555555555555555555555555555 66 55 5 1 5 77777777 5 0 888888 5 1 5 6 1 6 99999999999999 3 99 00 1 6 6 5555555555 6 22222222222 1 1 7777 5555 88888 8 99 1 77 77 8 2222 999 3 55555555 8 8 44 2 55 6 55555 66666 33 5555555555 777777 33 0 1 88 3 3333333 0 0 0 0 2 0 777 4444444 2 00 33 111 0 111 0 444 0 8 0 3333 0 8 8 0 4444 777 0 0 44 0 88 0 9 0 0 33 2 666 0 0 0 3 0 33333333 5555 0 1111 2 3 0 0 1 5 0 0 000 3 44 3 3 6 3 3 6 3 2 6 1 3
lowQualScore : . .. . . ... . .. . . .. ... .. ... . . . . . . . ... ...... . ... .... . . . . ....... .. . . ....... . . .. . ...... . .... . . . .. ... .............. . .. .. . ... ...... .. . . ... ...... . . .. . . . . . . . . . .. . ... ... .. . . ... . .. . .......... . . . . . .. .. .. . .. ... . .. . . . . . . . . . . .... . . ....... ...... . . . .... . . . . . ........... . . . . ..... ....... . .... . . ......... . . .. . ........ . . . .. . ..... .... ... ..... . . .. ...................... . . . . . . . ..... ........ ... . . . . .... . . .. . . . .. ... . . . ................... . . . .. ... ........ ...... .................. ..... .... . ............. . . . . .. .. . ... . ................. .. . ................... . . . . ... . . . . . ...... . . .. . .. .... . . .. .. .. . .. ...... . . . ... .. ... . .. .. . . . . . . ... . . .. ... ... . ... .. . .. . .. ..... ... . . .. . .. .... .. . .... . ............. . ..... .. ..... ........ .. . . .. .. . ... .. .... ... . . . ........................... .. .. . . . ........ . . ...... . . . . . . .............. . .. .. . . . .......... . ........... . . .... .... ..... . .. . .. .. . .... ... . ........ . . .. . .. . ..... ..... .. .......... ...... .. . . .. . ....... . . . . . . ... ....... . .. .. ... . ... . ... . . . .... . . . . .... ... . . .. . .. . . . . .. . ... . . . . . ........ .... . .... . . . . . . . . ... . .. . . . . . . . . . . .
lowQualScore : 0 00 3 0 777 0 33 0 3 33 777 00 000 0 0 5 0 0 0 5 000 555555 0 000 5555 0 7 0 8 5555555 88 0 8 7777777 7 7 00 2 555555 7 2222 7 3 0 66 000 00000000000000 8 22 00 4 000 000000 44 0 0 888 111111 7 7 77 0 0 0 8 0 0 0 7 0 00 6 000 444 66 0 5 111 0 99 0 1111111111 0 1 9 7 7 99 77 99 1 99 444 7 22 8 0 0 1 7 0 7 7 0 7 3333 0 0 9999999 888888 5 0 2 4444 0 0 0 0 4 00000000000 0 5 2 9 11111 4444444 4 0000 0 3 666666666 0 2 55 0 77777777 6 0 6 88 6 55555 1111 999 66666 0 3 66 8888888888888888888888 3 0 6 6 6 3 6 55555 44444444 000 0 0 0 0 5555 2 0 55 1 0 0 55 000 0 4 4 3333333333333333333 8 5 6 77 000 44444444 333333 555555555555555555 55555 6666 3 5555555555555 3 3 3 3 00 55 0 999 0 99999999999999999 33 4 6666666666666666666 4 4 0 4 999 0 0 0 0 0 444444 0 0 11 2 99 6666 0 0 99 44 00 4 33 666666 0 8 8 444 11 888 7 11 88 4 0 4 4 0 0 333 0 9 99 222 999 4 666 11 4 11 0 66 44444 666 4 4 00 4 00 2222 99 0 4444 0 6666666666666 0 11111 99 55555 00000000 99 0 2 99 55 0 000 77 7777 999 7 0 7 111111111111111111111111111 44 00 7 6 7 00000000 7 4 333333 7 0 7 7 0 7 55555555555555 5 22 22 8 7 7 0000000000 7 88888888888 4 0 0000 8888 00000 0 22 0 66 00 0 2222 222 8 00000000 0 0 66 5 88 7 88888 88888 88 2222222222 555555 88 5 0 00 2 0000000 8 2 0 0 5 0 555 8888888 5 22 22 000 5 000 2 000 8 0 8 0000 8 0 0 0 8888 000 0 0 22 0 88 8 2 0 0 88 5 555 0 0 0 2 0 88888888 5555 0 8888 5 2 0 0 0 5 0 0 000 3 00 3 3 7 3 3 7 3 0 7 0 3
consensus : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTT-AAC-AAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AA-T--ACACTT--T-------TAAATG-TACTTATACAA-ACT-TATATC--GGG-NTGTC--TNAGCTAC--AGAAT-T-AAATCTACTTCTNGA-TTAT-TTAATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--G-A--GAT--AC--ATAGG-AGAA--AATACNAGATTTATNT-ATGATCTCGATG-T----CTTACACTGAAATGGACT----AAT---AT-TC-CAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-TCNTTT-ATTCTATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGGG-G--A--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTAT-CAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAAGGG-GG-ACCCTGTT-G-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-ATA-T----GT---A----TG-AACGA-T----------AA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-TTC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GAT-ACN-ATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACT-ANAAATA--AA---TANCTC--AAAAACA-AA-AATNG-TTT-GGATNGGNT---CNAAAAAATTTTCNGAA-G-AAGT-N-TTTCA-CCATN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--ATT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTACACAG-TTG-TTAAAAG--ACAC-TGCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCNCTAAGTGAANAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAA----G-TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
Reference ( family-2981 ) : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTT-AAC-AAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AA-T--ACNCTT--T-------TAAATG-TACTTATACAA-ACT-TATATC--GGG-NTGTC--TTAGCTAC--AGAAT-T-AAATCTACTTCTNGA-TTAT-TTAATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--G-A--GAT--AC--ATAGG-AGAA--AATACNAGATTTATNT-ATGATCTCGATG-T----CTTNCACTGAAATGGACT----AAT---AT-TC-CAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-TCNTTT-ATTCTATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGGG-G--A--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTAT-CAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAAGGG-GG-ACCCTGTT-G-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-ATA-T----GT---A----TG-AACGA-N----------AA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-TTC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GAT-ACN-ATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACT-ANAAATA--AA---TANCTC--AAAAACA-AA-AATNG-TTT-GGATNGGNT---CNAAAAAATTTTCNGAA-G-AAGT-N-TTTCA-CCATN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--ATT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTACACAG-TTG-TTAAAAG--ACAC-TGCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCNCTAAGTGAANAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAA----G-TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
gi|1 : AAATGGGTGGAAGA-AGGGA--AAACCTAGTAAATATTTCTGT-GCTTTAGA---TCTCGTA--ATTTTTT-AATTAAATA---TCAAAAAAGG--TAAAAC-A-CAAGAAGTCGAGGTATTTATAACCAGTTGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAG------TTCAAAATTCTCTGGA----TAAAGTAATCTGAAAAGTGAAATTTT-TACAA-GTC-TG-AAAAA-A-G-----AAA-AATTACAAA-TCCACCAGGA--A-T-GATGG-ATTCA--T-GTTG-AGTTTCTTTAAG-TTTTTT---GGAAGG--------------A-ATC--AA--GAAATA---TGT---A--GAAG-TGTT-TAATT-CAAATTTTTAAGA-AAAG-GAGCTT-CCA-ATATCACAAAGACT-GGA-TTTAATCACT-TGTTTGCCAAAAGGTGA--AAACCTAGAC---AATTTC-TGAAAAATTT-GGCGTCC---A-T--TCTCTT--T-------TAAATG-TGCTT-TGAAA-ACT-TATATC--GGGCCTGTCTTTTA-CTAC--AGAAT-TAAAATCTACTTCTTGA-TTAT-TTGATATCGG-ATT-GTCAATC-T--G-TTTATA-AAGG--G-T--AAT---C--ATAGT-AGAT--A--ACAAGATTTGTGT-ATGATCTCAATG------CTTTCACT-AATTGGACT----AAT---ACATC-CAGGA-TACA-CTTGTGCT-CTA--TA-GATT-TTGAAAAAGCTTTCGA--CT-C-A-TATC-TGG-AAGTTT-ATTCTATAAA-GT---TCTTA----AA--C-------CTTGTATTTGGGCG--A--ATATTATAAATT-----A--CAT-GGGTTA-AAATT-TCTAA-A-TATTCAAAC--A-T---AAAG---CATCTGT-ATTACA-A-A----GCGGTTCC--TTTC-CAG-AAAGCA---AAT-TGATATAC--AAGAGA-GCGTTG-GCAGAC-AGGA-GA-ACCCTATC-G-C-----AATCCATA-TT----ATTT-------TCC-T------TGT-C---GAAAT---TCTAGTCTATT-CT-TG-T-CAA-AGCA-AAATAATGAG--A-TATTATG--GAT-A-A-T----G----A----TG-AATGAGG----------AA----GGAGCA-CAA-AATCTC-CCA---ATAT-CAGA-CG-AC-AC-TTT----T-TGGCTCTGGATGGTTCCCCAAAATCTCT--TTTTGC----TGCTCTT-GA--ACA-AGT-AAA-TTATCACTC-TA---C--TTTT-CTGGATT-ACAAATAGGAA---TA-CTC--AAAAACA-AA-AATAG-TTT-GGATAGGCT---CTAAAAAATTTTCTAAA-G-GAGT-A--TACA-CCATA--CAA--AGC--AAA--GCTAGAGT--GGG--AT-TACT---ACTAT-CCAATCTTAT-TAGGC-AT-A-GAAT--TT-TC----GTGG--ATA--TGAA-AAA-ATAGTG-GATTA-----AAAAT--AC----AAT--ATT-CA-ATA--CC--AA-AATTAAA---GCTT-TGATAC-AC-ATCTG-GAATAGAA-GAA----A----AC-C--ACTCCTCATT---GTCGA-GTCCACAG-TTGCTCAAAAGACACAC-TGCTT-T-A--CCGTAAGCTTAATC-ATT-TGT-TTAT--TGGC-ACT--A-TACCAAAATTCC------AGAG-AG----------A-TACTT--GTCTCT--CTGAATAGTTTGTTCTTTTTCGAATTTATA----TGG-AT-TCAAAGATT-GACATAGGTT--ATAAAGACAAAC-GT--TACTGGCAA-GAACCGACTT--AAAGTGG--CTTA-AAAATG--T--GAGTGTTGATAAA--ACTTTT---TATAGCATCTTTAAA----G-TAC--ATGCGATAAAAGGGTTAACAAACT--G-TCATTCAAAAC-CATGG-TTAGATATTTTT---CTTTGAAAT-AAT-GCATA-AATGGTGG-T-AC-AAA-T-TGTT--GATTTTGGTGATGATATAT----TT-A-AATGG-T-TATGAA--TCACAGTA--AAGATTTTGG-CAT-GAATG--TTTCCAGTCATTGGTTTGTC-TCCTTTA--AAACAATG-TGGA-TA-AAAA-TC--TCAAGTTC--AAT-T-TTATCGTTCT-GTCCC--A-TATGGT-TAATATCATAATCTC-GT-GTT-GGAAATAAGAGTATTTATG-TTAAAAAATGGCAT-CT-CATGGGTGTG-AAAATAA-TT-GCG-ACTT-TTTAGTATGATGATTGGAAA
gi|10 : cgggctGGTGATTAAACCTAAAC---AATTTT-TTAAAAAACT-GGTGACC--GA-TT-ACATTG--T-------TAAATG-T-CTTATATAA-ACT-TATTTC--AGG-TTGTC--TTAGTAAA--AGAAT-C-AAATCTACTT-TAGG-TCATCTCAAT-TCAG-ACA-CCCAGTC-TG-GATTCATG-AAGG--GAA--GAT--AT--ATTGG-TAAA--AATACCAGATTTATCT-ATGATCT-AATG-C----ATTATACAGAAA-GTAAT----AAT---AT-TC-CAGGA-C-TA-TTGGTATT-G-A--TA-GACT-TTGAAAAGGCTTTTGA--TTCC-A-TTTCATGG-TCATTT-A-TATATAAA-GT---A-TTG----AA--ATAT----TTTGGATTTGGT-G--A--ATAC-AT-TATT-----G--AAT-GGGTAA-AGATTCT-TAA-
gi|11 : gttacacaacaacttaaatactcTCTG-AAAGTGAAATGTTGTACAGTCT--TGTAAGGATA-G-----GATTAATAACAAA-TACACCAGGA--AGT-GATAGATTTCAACTATTTGGAATTTGTTAAAGTTTTTTTTTTG--AGG--------------ACATCAGAA--GAATTAATTTGT---G--AACG-TGGT-TAAT--CACATTTT-AAGATAAAGAGAGCTT-CCA-ATCTCACAAAGACG-GGG-AT--ATCACT-TGTTT-CCAAAAGGTGAT-GAACCTCGAT---AATTTTCTGAAACATTTTGGCGTCC--AA-T--TATCTTCTT-------TAAATG-TGCTTGTACAA-ACTATATAGC--GG--ATGTC--TTAGCTAC--AGAATAC-AAATCTACTCCTTAT-CTAT-T
gi|12 : TG-AAGG--G-AA-GAT--ATCTATAGG-GGAA----TACTCGATTTATTTTATGAGATT-ATG-T----CATACACTGAAAGAAACA----GAT---AT-TC-CAGGTCT-TC-TTAGTACT-C-A--T--GATT-TTGAGAAGGCCTTTGA--CT-C-AATGTCATGG-TCTTTC-ATT--ATAAA-GT---T-TTA----AA--CTAT----TTTGGTTTTGGG-A--A--A-ACTTT-A-TT-----C--AAT-GGATAA-AGATT-T-TAA-A-TT--CAATT--T-C---AGAG---CTTCAAT-TTTAC--A-A----GTGGATTT--TTAT-CAG-AA--CA---GTT-CGACATA-----------------AC---CAAAGG-GG-TCCCTATT-A-C-----A--CCATATTTATTCATTT-------TAT-G------TAC-C---GAAAT---TCTTG---------------------------CAA--AG--A-TATAAAG--GGT-ATA-T----GT---A----TA-Agatacgat
gi|13 : TTT-CAGGTCT-AAGGATA--AA---TTTTTC--AAAGACA-AA-AATGG-TGT-GGATAGGTA---GTAAAACATTTTCAAAG-G-AGGT-T-TTCCA-TCATT--CAA--GGT-GGAA--ATTTGACT--GGA--A--CAATGAAACA-T-TGGAT-TTAC-TAGGG-AT-A-AGAT--TCAAC---AGTAA--CTT--ACAA-GAA-ATGGTT-GAAAT-----GAATT--AT----AAG--ACT-AAATTA--AAG-GA-AATTAAAAAGGTTA-TGAT---GC-A-GTG-GAATAGTA-GAA----A----TCGT--ACTCCT--TTA-GGAAGG-CTA-ACAG-TAA-T--AAAG--ACA-------------CCA-AAATTGAATC-AC
gi|14 : agttctccaacttctatggatgacattattagagtcctagattacttggcaataa---T-CTA----AA--ATAT----TTTGGTTTCGGG-G--A--TTA-TAT-G-TT-----A--GATTGGATTA-AGATT-C-TAA-A-TA--CATAT--TTC---AAAG---CTTCGGT-TCTACA-A-G----GTGGTTTC--CTAT-CTG-AA--CA---GTT-CAATAT-T--GAACGT-G-GTTG--CAGACAAGGG-G--ATACTGTT-G-C-----A--CCATAT------ATTT-------TTC-TCCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAA-A-CA-AAACAA--AT--A-TATAAAA--GGT-AT--T----GT---AATTTTA-AACGA-T----------AA----AGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AT-AC-CTC----TCTTGCTCTTGATGGTACTCCTAAGTCATT--ATTCGC----TGCCCTT-GAT-ACT-ATT-GAT-TTTT
gi|15 : TTTATGT-ATGACATT-ATG-T----CATACACTGAAATAAAC-----AAT---AT-TC-CAGGT-C-TT-CTAGTACT-C-A--TT-GATT-TTGAGAAGGCCTTTGA--CT-C-AATGTCATGG-TCTTTC-AT-CTATAAA-GT---T-TTA----AA--CTAT----TTTGGTTTTGGG-A--A--CAAAAAT--ATT-----C--AAT-GGATAA-GGATT-T-TAA-ATTC--CAATT--T-C---AGAG---CTCCGAT-TTTACA-A-A----ATGGATTT--TTAT-CTG-AA--CA---GTC-CAACATAC--AA-AGA-G-GGT--GTAGAC-AGGG-GG-ACCATGTT---------------TATTC----ATAT-------AAT-G------TGC-C---GAGAT---TCTTG-C-AAT-AT-TAAT-TAA-A-CA-AAACAA--
gi|16 : -AAAG-GAGCTC-ACT-ATTTCATAAAGATT-AGG-AATAATCTCA-TGTTTGCCAAAAAGTGAC-AGACACGGACACAAAATTT-TGGAAAAC-T-GATGTCC--TA-TA-ACATTC--G-------GAAATG-T-CTTATGTAA-ACT-TATATA--AAA-ACGTA--TAAGCTAC--GGAAT-T-TAATATAC-GCTAGA-TTAT-ATAATATCAG-GTA-CTCAAAC-TGTC-TTTCTGAAAGG--A-A--GAT--GC--AT--G-A-AA--AATA
gi|17 : ttttcttttttttgggggggggggggttgatttttaaaatattcatagtacaaagaataaataacatatatattcc-GATTTTGGTGATGA-A-ATAGTGTTAA-AATG--T-GATG-AATCCACAGTAT-GAG-TTTCGG-CACTG-ATG-TTTTCCAGTC-TTGG-TTGTC-TATGGTG--AAACAA-GATGGAATATATAA-TCATTC-AGTTCAAAATATGTT----TTCT-GTTCCCAG-TATG-TATAATA-CA-AATATC-GT-GTTTGGAAATAAA-GTATTTATG-TTAAAACATGGCA-GCTCCAT-GGTGTGAAAAATAA-TTGGCG-ACTTCTTTAGAATGAGAA-TGGAAAaaa
gi|18 : GA-TG-AT-AC-ATCAT--C-TTGCCCTTGATGGGAATC-TAAGTCACT--TTTT------TAGCTTTAGAT-ACG-TTTAGAG-TTTTTTCTC-CA---AAGCTTT-CTGGTTT-TAAGGTA--AACTGTACC-----AAAACA-AA-AATTGTTTT-GGATCGGAT---CAAAAAA--TTTCAGAT-C-TGGTCT-TTTCA-TCATT--C-A--GAT-GGAA--ATTG--CT--GGG--CT-CAACA--ACT-T-TTAA-CTTAC-TAGGgt
gi|19 : gcgcG-TCTTTT-GTT-TATAAG-GT---T-TTA----AGGTTTCT----TTTTAATGTGGT-ACAA--ATACGAT-AATTTTATAA--AATTGGATGA-A-ATT-T-TAA-A-TA----ATT--T-T---AAAG---CTTCTAT-TCTTCA-A-A----GTGGCTTT--TTAT-TAG-AA--GA---ATT-T--CAT-------TGA-T-GTCG-TC-----AGGG-AG-ACCCTGTT-T-C-----T--CCGTA--C----ATTT-------TTC-TTCTTTGTGC-A---GAAAT---TCTTG-CAATT-CT-C-AT-TAA-A-CA-AAAccaaaactaatataggtttttt
gi|2 : TGGATAGGGGAAGGGGAGGAAACCTTCGAAGTACTTTTGTAGGTCTCGAATTTCTAGGA--ATTATTTAAAC-AAATAACTTTAAAAAAGtcatgat
gi|2 : tatgataagatctcgtgctcgccAAGTTA---GACAGGCATTATCCACAAT---CTGGAGGGGTGAAATTAT-TA-GAGGAGAGGTTCT-TA-ATTGTACTA-AAAAATA-ACATGAAAA-AATAACAAAATCTTCCTAGAGTAGCCGATGG-TTACA--CAACAG-AATTC-TTCAATTTTTTTT---GGAATG--------------ATATTAAAA--TATTTA---TGT---TGTAAAG-AGCCATAAAT-TGTATTTTTGTAA-GAGG-AAACTT-CCCTACTTCACAAAGACTAGGA-ATTATTT-CT-TGTTTACCTAAAGGTGAC-AAGCCAAGAC---AGTTTT-ATAACAA-TT-GGAGGCC--AA-TTTACACTT--T-------TAAATGGTACT-ATACAACAAT-TATATTCTGCG-TTGTC--TTAGCTACTCAGAAT-A-AAAAAAAGTTTTGGAATTAT-TTAATATATG-ATA-CACAGTC-TG-GGTTTTTG-AAGG--A-A--GATTAAT--ATAGGGAGAG--AATACTCGATTTATTT-ATGACATGTATG-C----ATTACACTGAAAGGAAAC----AAT---AT--C-CAGG--T-CATCTAGTACTTC-A--T--GATT-T-GAGAAGGCCTTTGA--CT-C-A-TG-CATG--TCTTTC-ATT-TATAAG-GT---G-TTA----TA--CTAT----TTTGGTTTTGGG-G--A--A-ACTTT-A-TTCC---A--AGT-GGATAA-AGATT-T-TAA-A-CT--CAAAT--TTC---AGAGG--CTTCAAT-TTTACA-G-A----GTGGATTT--TTAT-CAG-AA--CA---GTT-CGACATAC--AAAAGA-G-GGGGTGTAGAC-AGGG-GG-ACCCTATT-G-CCA---G--CCATATTT----ATTCATATTTATGC-T------GGC-C---GAAATA--TCTTG-CCAATAGT-TAAT-TAAGA-CA-AAACAA--AGGTA-TATAAAG--GAT-ATA-T----GT---A----TA-AA--A-A----------AACACTGAAACA-TAAGGTTATC-ACAAT-ATATGCAGA-TGAAT-AC-TTCCCCAC-TAGCCCTTGATGGTTTCACAAtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacaatactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|2 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgtt--AA---TA-CTCCTAAAAACT-AA-AATTG-TTT-GATTTGGTTTG-CAAAAAAAAATTCTGAA-CCAAGT-T-TTCCA-CCATTACCAA--GAT-GGGA--AATAGATT--GGGTGATCAACAA--ACC-T-TTAAT-TTAT-TAGGT-AT---TAATGTCT-TT---GATCG--A-----GAA---A-ATTGAA-GATTTT----AAATT--TTT---GGA--CTC-CAAATT--CCT-AA-AATTGTT---GCTC-TGATTAAAC-A-GTG-GAGGAGA--GAATTC-A----AT-T--ACTCCT-ATT--GGTCGG-GT-CACTG-TGA-TTTAAA----CCT-TGCTTAT-TTGCCA-AAATTAAATC-ATT-TGT-TCATA-T--C-TGT--CGTTCCTAC--TCCT-AAA-AAGG-AGGACAATTTCAA-TATTT--ATGCC-------AAAATTT----TATTCG-AATTCTTG----TGG-AAGTCTAGTGT-AGATA-AAGTC---CAAGAG---GTCGTAATAAC-CCAA-G-ACATATCTTATCAGTG-----TATAAGATG--T--AGGTA----TAAACCAACTTTAATTAT---ATCCCTGAA----GATGCTCATG-GATTAAAAGGCTTACTAAGTCAGATTGTCATAAATTCTTGGATTA-ATA-TTTTGTGCTGTG-----TATGGAAATGAAT-ATTC-TTATGAAG-TATAT---GATTTTGGAGATAT-TTAT----TGAAGAATGG-tactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|20 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacGAAAGCTGG--CTTA-AAATGG--TTGGAGTG------AA--AACGTG---TAT---ATTTTTAAA----T-TAC--ATATGATCAAA-CGTTAACAA-CT--G---GTTACAAAC-CATGG-TTAGATA-TTTT---CTTTG--ATCC-TGGCAAC-AA--GTGG-T-ACAAAATT-TGTTA-GATTTTCGTGATGA-ATATG---TTAA-ACTGG-TATATG-A--TCATAGT---GAT-GCTTGG-CAA-G-ATG-TTTT-CAGTGATgttttgcaaggaaaaaaatgagca
gi|21 : -AAGG--A-A--AGA--AT--ATGGA-AGAG--ATTGCAAGATTCATTT-CTGATTCAGA--------ATTATAAT-AACTGGACT--------------------T-T-TA-GTATTATT------T--GATT-TGGAGGAAGCCTTTGA--TT-CTA-T-TCCTGG-TCATAT-ATT-TATGAA-GTACAT-GTATAAGAA--TTG-----TTTGGATTTGGA-G--A--Agtt
gi|22 : catctcattttggatgatacCAGGGG-TG-ATCCTGTT-G-C-----G--CCATAT------ATTT-------TTC-TGCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-AT--T----GTG--A----TT-AATGA-T----------AA----AGAACA-TAA-CTTATC-TCA---GCATGCTGA-CG-AC-AC-TTC----T-agtacgacgtcttatttacggagtaaagat
gi|23 : TGCCTAAAGGTGAT-AAACCAAGAC---AATTTT-TAAACAAC-T-GGCGTCC--AATT--ACACTT--T-------TAAATG-TAC-CATACAA-GTT-TATGTC--GGG-TTGTC--CAAGTTTC--AGAAT-T-TAA-CAGGTCTTGGA-TTAT-ATAATTTCTG-ATA-cttg
gi|25 : aAATATG-----AAA-AATAACAAA-TCT-CCAGGT--AGT-GATGG-TTATA--GTGTTG-AATTT-TTAAA--TTTTTT---GGGGGT--------------AGATCTGAAAGAAATTA---TAT---T--AAAGTCAAT-TAATTGTATATTCTCCA-A-AAAG-GAGCTT-CCC-AT
gi|26 : CTAGAGTAGGGG--ATGTACTA--ACT-T-TCAA-CTTAT-TA-GC-AT-AGGAAT--TG-TC---TGTGG--AGTAGAGAATAAATATAGTT-GATTT-----AAATT--ACAAATGGAGGGTG-CAGATACGCCA-AAGAGTTAA
gi|27 : -TTTTCCAGTCAT-GG-TTGTC-TATGGTG--AAA-AA-A-TGGA-TA-ATAA-TCATTC-AGTCCAA----T-TTATTATTTTTGTCCC--AATATGGTATAATA-CA-AATCTCTGT-GTT-GGAAgt
gi|3 : TACTTC--GC-TTAT-TTG-TATCGG-ATA-GTCAAGGGTT-G-TTTATA-AAGGTCG-A--CAT--AC--ATTGG-AAGAGTAATGCAAG-TTTGTGA-A-GATCTCG-TGCT----CTTTCACTGAATTGGACC----AAT---A---CACAGGG-A-TA-TTTGAACT-C-A------GTT-GTGAAAAAGCTTTCGAGACT-C-A-TATC-TGGATAGTTT-AT-CTATAAA-GT---T-CTA----AC--CTATCTACTTTGGATTTGGA-G--A------------------------T-GGTGTA-AAATT-TGTAA-A--A--CAAAC--CAT---AGAGGAACATCTGTACTTACA-A-A----GCGTATTTCCTT-T-CAT-AA--CACATATTGCATTATAC--CAGAG--G-GTTG--CAGACAAGGA-GT-ATCCTATG-A-CTAGCGA--CCATTTTT----GTTA-------TTC-A------TGG-C---AGAATGTATCTAG-CTATTTCT-TG---CAA-G-CGCAAATAA--AG--A-TATTAA---GGTGATA-T----GT---A----TG-AATGA-T----------GC----GGAGCAACAA-AATCTC-TCA---ATATGCAGATCT-ACCAC-ATT----T-TGGCTCTTGATGGTTCCCCAAAATCTCT--TTTTGCGTTATGCTCTT--AT-AC--ATT-AACACTTTTACTC-TA---C--TTTTTCTGGATT--CAAATA--AA---TAGCTC--CAAAA-A-AA-AATAG-TTT-GGATAGGCTT--CTAAAACATTT-CT-AA-G-AAGT-A-TATCA-CCATA--CAC--AATAGGAAATGCTGGAGT--GGG--ATGTACTT---CT-T-TCAAGCTTAT-TAGGGCATTG-GAAT--TT-CT---TGCCG--AG---AGAATAAA-AT-GCAAGCTTTTTTCTAAATT--AC----AAT--ATTTCAGATA--CCA-AA-AAATAAA---GCTTATGATACA-----GTT-GAATAGAAAGAA----A----ACTC--ACTC-TCATT---GTCGG--CGCACAG-TTG-CCAAAA----CAC-TACTTTT-A--CCT-AAGCTTAATCCATC-TTTGTTAT--G--C-ACT-----GCCAAA--TTCA-AGATAAAG-AATA--------A-TGTCT---TCTCT---TGAATAGTTT----TTTT-----TTTATTACTATGG-A-ATTCAAGATT-GACA-GGGTT---CAAGA-CAAACTGT--TACT-CCAA-G-ATTCACTTGAAAAGTGG--CTTA-AAAATGGTT--GAGTG-----AAA--AACTT-----------CCTTTAAAGACTG-TAC--ATGTGATAAGAACGTTAACAAACT--GATC---ACAAAC-CATGG-TTAGATA-TTTT---CTTTTAAATCCATGGCAAC-AAT-GTGGCT-ACAAAA-T-TTTTGCGA-TTTGGTGATGA-ATATC---TTAA-AATGGTT-TATG-A--TCACAGTAATGAG-TTTTGGCCAT-G-ATGTTTTTCCAGTCATGGG-TTGTCGTATGGTGAAAAACAA---TGGA-TA-ATAATTCATTC-AGTTCAAAAGAT-TTA----TCT-GTTCC--G-TATCGTATAATA-CA-AATATCTGTCGTT-GGAAATAAAAA-GCTTATGTTTAAAACATGACATGCT-CAT-GGT-TG-AAAATAATTTGGCGAACTTTTTTAG-ATGAAGA-TGTAAA
gi|30 : -G-----AAA-AATAACAAA-TTT-CCGGGA--AGT-GATGG-TTTTA--CAGTTG-AATTT-g
gi|4 : atAAAAACCT-G-CGTCCCCAA-T--ACACTT--TCTTTTACTGAATG-T-CTTGTATAA-ACT-TATATC--AGG-ATGTA--TAAGCAAC--AGAAT-T-ACATCTACCACTAGA-TTAT-T-AATATCAGCGTAGCTCAAAC-TG-GCTTTCTG-AAAGCTG-AATGAT--AC--ATAGG-AGAA--AACACTAG-TTTATTT-ATGATCTTGATG-TTTTTCTTTCACAGAAA---GCT----AACCAAAT-TC-CAGGA-T-TA-CTAGTACT-T-T--TTGGATTCTTGAAAAGGCTTTTGA--TT-C-AATTTCTTGG-TCCTTTTATT-TACAAACGT---T-TTA----AA--ATAT----TTTTGGTTTGCG-G--ATCATACTGT---TT-----ACGATT-GGATTA-GAATT-C-TGA-A-CA--CAAAT--T-CTCAACAG---CTTCGGT-TCTACATA-G----GTGCGTTT--CTATTCTGCAA--CA---GTT-CAAAATGTTGAACGTC-G-GT-G-GCAGACAACGGCGGCATCCTGTTTGTC-----A--CCATATAT----TTTC-------TCC-T------TGTGCTTAGCAAT----CTGG-CT-CT-CTCTGATGCAA-A-CA-AAACAA--AG--ACTATAAAATTGCT-ATC-TTGTTGC---A----TT-AACGA-TTTTTCTTTTAAA----CGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AC-AC-TTCCTC-T-TCTCCTTCGAATGTACTCCTAAGTCTTTA-TTCCGC----TGCCCTTCGATTACCTATT-GAT-TTTTTTCTC-AA---AA-TTCT-CAGGACT-CCAAATA--AA---TACTTC--AAAAACTTAA-AATTA-TCTCGGATTG-AT---CAAAAAAATTCTCGGCATG-AAGT-CATTTCATCCATTT-CGACCGAT-GGAA--GCTGGATT--GGGG-ATGCACTG--ACT-TCTCA--TTTATATAGGA-AT-A-C-AT--TT-TCGAGGGTAGACATT----AAC-AA-ATTACG-AA-CT-----AAATT--AT----GGA--ATT-CAGATA--CCA-AA-AATAAAA---GCTA-TGATACAAC-A-GTGCGAGAAGAA-GCC----G----AT-CTAACAC--CAATA-GGTCGGTGTA-ACAGCTTG-TT--AAG--ACAC-TACTTGTCC--CCA-AAACTCAATC-ACC-TTT-TTAT--T--CTCCT--C-TACCAAA--CCCTAAAA-AAAG-AG----------ACTATTTTCATCATTAAGTAAAGAGTTA----TTTC---AATTCATT----TGA-ATGCCTAACATCAGATA-AAGTCAAACAAGAAC-AACTGT--TA---CCAACG-ACCTATTTGAAAAGGGGGTCTCT-AAAATG--
gi|5 : AGATGGGTGGAGGAGAGCGAG-AAATCCACTAAATATTTCTGT-AACCTAGAA--TCTAGAAACACTCCTT-AA--AAACAA--TCAAAAAAGGGTTAAAACTATCGAAAAGGTAATG-ATTGATACTCATTCGGA-CATgtgcgttcgattatttactaaatttattatttctcttgaaatgttcatggata
gi|5 : cacgatcaTG-AACGTGAAATTTG-T-TAGCGT--TA-AAGAATATG-----AAA-AACAACAAA-TCAACCGGGA--AA--GATGG-ATTTA--CAGCAG-AATTT-TACAAGTTCGTTT---GGAATGAAGCTATTTATTAAAGATGTAAA--GATCTA---TATTACA--AAAG-CACT-TCA-T-CATATATTTCAGT-GTAT-ACATTTGCCA-GCATCACAAAGACT-TGAGATTA--TACTATGTTAACACAAGGGAGAT-AAAGC-AGAG---AGTGTT---AAAAA--T-GGCGACC--AA-TA-ACTCTT--T-------TAAA-A-TATTTCTGCAgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggtgaacgtgaaatttgttagcgttaaagaatatgaaaaacaacaaatcaaccgggaaagatggatttacagcagaattttacaagttcgtttggaatgaagctatttattaaagatgtaaagatctatattacaaaagcacttcatcatatatttcagtgtatacatttgccagcatcacaaagacttgagattatactatgttaacacaagggagataaagcagagagtgttaaaaatggcgaccaataactcttttaaaatatttctgcacggtgcttttaacaaattatacttctttctatctggtctt
gi|6 : cacgatcaagatgggtggaggagagcgagaaatccactaaatatttctgtaacctagaatctagaaacactccttaaaaacaatcaaaaaagggttaaaactatcgaaaaggtaatgattgatactcattcggacatgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-CATAAAA--GGT-AT--T----GTG--A----TT-AACGA-T----------AA------AATA-TAA-ACAATC-TCA---GTATGCTGA-CG-AC-AC-TTC----TCTTGCTCTTGATGGTACTCTTAAGTCCTT--ATTCGC----TGCCCTT-GAT-ACT-ATT-GAT-TTTTT-CTCAAA---A--TTCT-CAGGACTAAAAAATA--AA---TATTTC--AAAAACT-AA-AATTA-TCT-GGATTGAATAAAAAAAAAAAATCTCGGAT-G-AAGT-A-TTTCA-TCATT--CGA--GAT-GGAA--GCTGGACTG-GGG--ATGCGCTG--A-T-T-TCAATC-TAT-TAGGA-AT-A-TATT--TT-TC---GGTAGA-ATT--AG-ACAAA-ATTATG-GAACT-----AAAGT--AT----GGA--ATT-CAGATA--CCA-AA-AAGAAAA---GATG-TGATACAAC-A-GTG-GAGAAGAA-GGATTCTA----A--C--AC----CAATA-GGTCGG-GTA-ACAG-TTG-TT--AAG--ACAC-TACTTAT-C--CCA-AAACTTAATC-ACC-TTT-TTAT--T----TCT--C-TACCAAA--CCCT-AAA-AAAG-AGA---------A-TATTTC-ATCATTAAGTAAAGAGTTT----TTTC---AATTCATC----TGGAATGCTGA--ATCAGATA-AAGTC-AA-AAGAAC-AACTG-----------A-G-A-TTATTTGAAAGGGGGT-CTTA-AAAcggtgcttttaacaaattatacttctttctatctggtctt
gi|7 : AATGGAATGCGGAAA---AT-TC-CACGT-C-TT-CTAGT--T-T-AATT--GATT-TTGAGAAGGCTTTTAA--CT----------TGG-TCCTTC-A-GATATAAA-GC---T-TTC----AA--GTAA----TTTGGTTTCGGA-T--A--ATATT-T-CATT-----C--AAT-AGATAAGATATT-T-TAAGA-CA--CAGATA-T-C---AGAG---CTTTCAT-TTTACA-AGA----GTAGAGTT--TTAT-CAG-CA--TA---GTT-AGATATAC--AA---ATG-GTAT-GTAGA-AA--------------T-G-C-----A--CCATATTT----ATTT-------CTCATATG---TGC-T---GGAAT---------------------T-CAA-A-CA-AAACAA--AA--A-TATAAAA--GAC-ATA-T----GTTCAG----TGTATTGA-A----------AACAC-AGAACA-TGA-TATATCGCCATATATATGCAGA-AT-AT-AC-TTCA---G-TAGCTCTTCATGGTTTAACTGCATCCCTGGTATTGG----TG--TTT-GAT-ACA-ATA-GAA-TTTTT--TG-TACAGT--TTTT-CTGGTCT-AAAGATT--AA---T-TCTT--CTACACG-AATAGTGG-TCT-GGATTGATT---AAAAAAAA--TTCAGAA-C-CAGT-T-TTTCA-TCATA--GAA--GAT-GGAA--ATTGGATT--GAG--G-GTTCTT--AAT-A-TCTAACTTAT-TGGAT-AT-T-CAAA--TT-TC---TGTTG--Atggt
gi|8 : cAGGA-T-TA-CTTGTGCA-C-A--TA-GAAT-TTGAAAAAGCTTTCGA--CT-CCA-TATCTTGG-AAGTTT-AT-CTAGAAA-GT---A-CTT----AA--TTAC----TTTGGATTTGGG-G--A---TAATAT-AATT-----A--CAT-GGGTTA-AAATT-T-TAA-A-TA--CAAACAAT-----AAAG---CATCTGT-ATTACA-A-ATTAAGCGGTTTC--CTTT-CAG-AA--CA---AAT-TGAGATAC--A-GAGA-G-GTTG--CAGACAAGGA-G--ACCCTATC-G-C-----A--CCATATTT----ATTTA------TCC-TATG---TGC-A---GAAAT---TCTAG-CTATT-CT-TG-T-CAA-G-CA-AAATAA--AG--A-TATTAAA--GGT-ATAAT----G----A----TG-AATGA-T----------GA----AGAGCA-CAA-AATCTC-CCA---ATATGCAGA-CG-AC-ACATTT----T-TGGCTCTAGGTGGTTCCCAAAAATCTCT--TTTTGC----TGCTCCT-GAT-ACA-AT--AAA-TTATTACTT-TA---T--TTTTTCTGGATT-ACAAATA--AA---TAGCTC--AAAAACA-AA-AATAG-TTT-GGACAGGCT---CTAAAACATTTCCTAAA-G-AAGT-A-TATCA-CCATA--CAA--GAT-GGAA--
gi|9 : AA-ATTGAA-GATAT-----AAATTTTA-----GGA--ACT-CAAATT--CCTTAA-AATTGTT---TCTC-TCATTGAACGA-GTG-GAAGAGAA-GAA----ATTCTAT-T--A-TCCTTACTCTGGTCGG-GTACACTG-TGA-TTAAA----ACACTTGCTTAT-T--CCA-AAATTAAATC-ATTGTGT-TCATAAT--C-TCTTGC-TACT-----CCTT-ATA-AAAGTAC----------A-TATc
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): GCTTACTAATCAGAATGTCATAAATCTTGGGATTAATATTTTTTTTGCTGTGTATGGAAATGATATTCTTATGAAGTTATTATGATTTTGGAGATAGTTTTTATGATCAGAAGATGTTTCTTAAGGAAAAAA
Unaligned ( gi|28 ): TCCCTACTTCCAAACGGGATACAATTTCATACTTATAAATTCAAAATTTTATTTCGATTCTTACGGAAATCTAATAGTTTATGGTAACACAAGACTATCTATC
Unaligned ( gi|29 ): CTTGAGCAGAAAGAAATGAAAAGTGGTCTATTTCATGCCATGCTTTGGATG
Alignments
lowQualScore : 1 22 1 222 11 1 22 222 11 222 1 1 222 222222 222 2222 1 1111111 22 1 2222222 11 1111 1 11 111 44444444444444 11 11 111 222222 111 111 111 11 22 1111111111 1 111 2222 2222222 111111 2222222222 11111 1111 222222222 1 1 222 3333333333333333333333 22222222 111 3333333333333333333 11111111 111111 444444444444444444 11111 111 2222222222222 22222222222222222 2222222222222222222 111 222222 11 1111 1 1 222222 1 11 1111 11 11111 111 11 1111 1111 33333333333333 11111 11111 22222222 11 111 444444444444444444444444444 11 11 2222 111111 22222222222222 11 4444444444 33333333333 1111 2222 11111 11 3333 111 22222222 11 11111 33333 11 3333333333 222222 11 1 2222222 1 1 1 111 2222222 11 11 111 1 111 222 3333 1 1111 222 1 1 11 1 1 1 11 222 1 1 1 1 11111111 2222 1 2222 1 1 1 1 1 111 1 11 1 1 1 1 1 1 2 1
lowQualScore : 2 00 3 1 555 1 88 1 3 55 555 88 222 1 1 5 1 1 1 5 111 999999 1 111 2222 1 6 0 0 2222222 33 0 0 2222222 6 6 22 2 999999 6 2222 6 3 1 00 444 77777777777777 8 00 11 1 444 666666 99 1 8 444 777777 6 6 77 1 8 8 0 6 6 8 3 1 88 6 000 000 99 5 0 999 5 66 3 7777777777 5 3 3 5 5 77 66 77 1 77 000 1 11 2 5 5 1 4 5 5 1 6 3333 1 5 0000000 000000 5 5 0 7777 1 5 1 5 1 5555555555 0 2 7 0 22222 8888888 4 1111 4 0 777777777 4 1 55 4 6 4 7 0 3 3 1 333 3 66666 7777 666 7777 1 3 44 5555555555555555555555 7 1 3 2 3 7 3 88888 33333333 111 1 4 4 4 8888 1 1 55 55 4 55 777 4 1 1 4444444444444444444 0 6 3 3 7 3 3 77777777 000000 999999999999999999 00000 000 2 0000000000000 3 3 3 3 55 55 4 555 4 88888888888888888 2 8 7777777777777777777 4 4 1 4 333 1 4 4 4 88888 222222 1 1 11 1 11 0000 0 5 5 5 55 66 2 66 444444 0 0 0 44 5 66 777 9 66 55 4 1 4 4 1 1 00 1 2222 11 777 99 4 4 777 66 4 66 1 00 44444 222 4 4 33 4 66 3333 66 5 6666 1 44444444444444 5 22222 44 77777 11111111 66 5 2 66 00 5 000 66 7777 555 5 1 5 555555555555555555555555555 66 55 5 1 5 44 0000 66 888888 5 1 5 6 1 6 99999999999999 3 99 00 1 6 6 5555555555 6 22222222222 1 1 7777 5555 88888 8 99 1 77 77 8 2222 999 3 55555555 8 8 44 2 55 6 55555 66666 33 5555555555 777777 33 0 1 88 3 3333333 0 0 0 0 2 0 777 4444444 2 00 33 111 0 111 0 444 0 8 0 3333 0 8 8 0 4444 777 0 0 44 0 88 0 9 0 0 33 2 666 0 0 0 3 0 33333333 5555 0 1111 2 3 0 0 1 5 0 0 000 3 44 3 3 6 3 3 6 3 2 6 1 3
lowQualScore : . .. . . ... . .. . . .. ... .. ... . . . . . . . ... ...... . ... .... . . . . ....... .. . . ....... . . .. . ...... . .... . . . .. ... .............. . .. .. . ... ...... .. . . ... ...... . . .. . . . . . . . . . .. . ... ... .. . . ... . .. . .......... . . . . . .. .. .. . .. ... . .. . . . . . . . . . .... . . ....... ...... . . . .... . . . . . .......... . . . . ..... ....... . .... . . ......... . . .. . . . . . . . . ... . ..... .... ... .... . . .. ...................... . . . . . . . ..... ........ ... . . . . .... . . .. .. . .. ... . . . ................... . . . . . . . ........ ...... .................. ..... ... . ............. . . . . .. .. . ... . ................. . . ................... . . . . ... . . . . ..... ...... . . .. . .. .... . . . . .. .. . .. ...... . . . .. . .. ... . .. .. . . . . . . .. . .... .. ... .. . . ... .. . .. . .. ..... ... . . .. . .. .... .. . .... . .............. . ..... .. ..... ........ .. . . .. .. . ... .. .... ... . . . ........................... .. .. . . . .. .... .. ...... . . . . . . .............. . .. .. . . . .......... . ........... . . .... .... ..... . .. . .. .. . .... ... . ........ . . .. . .. . ..... ..... .. .......... ...... .. . . .. . ....... . . . . . . ... ....... . .. .. ... . ... . ... . . . .... . . . . .... ... . . .. . .. . . . . .. . ... . . . . . ........ .... . .... . . . . . . . . ... . .. . . . . . . . . . . .
lowQualScore : 0 00 3 0 777 0 33 0 3 33 777 00 000 0 0 5 0 0 0 5 000 555555 0 000 5555 0 7 0 8 5555555 88 0 8 7777777 7 7 00 2 555555 7 2222 7 3 0 66 000 00000000000000 8 22 00 4 000 000000 44 0 0 888 111111 7 7 77 0 0 0 8 0 0 0 7 0 00 6 000 444 66 0 5 111 0 99 6 1111111111 0 1 9 7 7 99 77 99 0 99 444 7 22 8 0 0 7 0 7 7 0 7 3333 0 0 9999999 888888 5 0 2 4444 0 0 0 0 4 0000000000 8 5 2 9 11111 4444444 4 0000 0 3 666666666 0 2 55 0 0 0 3 8 6 6 0 777 6 55555 1111 999 1111 0 3 66 8888888888888888888888 3 0 6 6 6 3 6 55555 44444444 000 0 0 0 0 5555 2 0 55 11 0 55 000 0 4 4 3333333333333333333 8 5 6 6 4 6 6 44444444 333333 555555555555555555 55555 000 3 5555555555555 3 3 3 3 00 55 0 999 0 44444444444444444 3 2 7777777777777777777 4 4 0 4 999 0 0 0 0 77777 444444 0 0 11 2 99 6666 0 0 0 9 44 00 4 33 666666 0 8 8 44 0 11 888 7 11 88 4 0 4 4 0 0 66 0 7777 99 222 99 4 4 111 11 4 11 0 66 44444 666 4 4 00 4 00 2222 99 0 4444 0 66666666666666 0 11111 99 55555 00000000 99 0 2 99 55 0 000 77 7777 999 7 0 7 111111111111111111111111111 44 00 7 6 7 44 6666 11 333333 7 0 7 7 0 7 55555555555555 5 22 22 8 7 7 0000000000 7 88888888888 4 0 0000 8888 00000 0 22 0 66 00 0 2222 222 8 00000000 0 0 66 5 88 7 88888 88888 88 2222222222 555555 88 5 0 00 2 0000000 8 2 0 0 5 0 555 8888888 5 22 22 000 5 000 2 000 8 0 8 0000 8 0 0 0 8888 000 0 0 22 0 88 8 2 0 0 88 5 555 0 0 0 2 0 88888888 5555 0 8888 5 2 0 0 0 5 0 0 000 3 00 3 3 7 3 3 7 3 0 7 0 3
consensus : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTT-AAC-AAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AA-T--ACACTT--T-------TAAATG-TACTTATACAA-ACT-TATATC--GGG-NTGTC--TNAGCTAC--AGAAT-T-AAATCTACTTCTNGA-TTAT-TTAATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--G-A--GAT--AC--ATAGG-AGAA--AATACNAGATTTATNT-ATGATCTCGATG----TCTTACACTGAAATGGACT----AAT---AT-TC-CAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-T-CNTTTATTCTATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGGG-G--A--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAA-GG-GGGACCCTG-TTG-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-ATA----TGT--A------TGAACGA-T----------AA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-T---TC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GA-TA-CNATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACTANAAA-TA--AA---TANCTC--AAAAAC-AAA-AATNGT-TT-GGATNGGNT--CNAAAAAAT---TTTCNGAA-G-AAGT-NTTTCA-CCA-TN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--A-TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTACACAG-TTG-TTAAAAG--ACACT-GCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCNCTAAGTGAANAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAA----G-TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
Reference ( family-2981 ) : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTT-AAC-AAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AA-T--ACACTT--T-------TAAATG-TACTTATACAA-ACT-TATATC--GGG-NTGTC--TNAGCTAC--AGAAT-T-AAATCTACTTCTNGA-TTAT-TTAATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--G-A--GAT--AC--ATAGG-AGAA--AATACNAGATTTATNT-ATGATCTCGATG----TCTTACACTGAAATGGACT----AAT---AT-TC-CAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-T-CNTTTATTCTATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGGG-G--A--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAA-GG-GGGACCCTG-TTG-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-ATA----TGT--A------TGAACGA-T----------AA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-T---TC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GA-TA-CNATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACTANAAA-TA--AA---TANCTC--AAAAAC-AAA-AATNGT-TT-GGATNGGNT--CNAAAAAAT---TTTCNGAA-G-AAGT-NTTTCA-CCA-TN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--A-TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTACACAG-TTG-TTAAAAG--ACACT-GCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCNCTAAGTGAANAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAA----G-TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
gi|1 : AAATGGGTGGAAGA-AGGGA--AAACCTAGTAAATATTTCTGT-GCTTTAGA---TCTCGTA--ATTTTTT-AATTAAATA---TCAAAAAAGG--TAAAAC-A-CAAGAAGTCGAGGTATTTATAACCAGTTGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAG------TTCAAAATTCTCTGGA----TAAAGTAATCTGAAAAGTGAAATTTT-TACAA-GTC-TG-AAAAA-A-G-----AAA-AATTACAAA-TCCACCAGGA--A-T-GATGG-ATTCA--T-GTTG-AGTTTCTTTAAG-TTTTTT---GGAAGG--------------A-ATC--AA--GAAATA---TGT---A--GAAG-TGTT-TAATT-CAAATTTTTAAGA-AAAG-GAGCTT-CCA-ATATCACAAAGACT-GGA-TTTAATCACT-TGTTTGCCAAAAGGTGA--AAACCTAGAC---AATTTC-TGAAAAATTT-GGCGTCC---A-T--TCTCTT--T-------TAAATG-TGCTT-TGAAA-ACT-TATATC--GGGCCTGTCTTTTA-CTAC--AGAAT-TAAAATCTACTTCTTGA-TTAT-TTGATATCGG-ATT-GTCAATC-T--G-TTTATA-AAGG--G-T--AAT---C--ATAGT-AGAT--A--ACAAGATTTGTGT-ATGATCTCAATG-----CTTTCACT-AATTGGACT----AAT---ACATC-CAGGA-TACA-CTTGTGCT-CTA--TA-GATT-TTGAAAAAGCTTTCGA--CT-C-A-TATC-TGG-A-AGTTTATTCTATAAA-GT---TCTTA----AA--C-------CTTGTATTTGGGCG--A--ATATTATAAATT-----A--CAT-GGGTTA-AAATT-TCTAA-A-TATTCAAAC--A-T---AAAG---CATCTGT-ATTACA-A-A----GCGGTTCC--TTT-CCAG-AAAGCA---AAT-TGATATAC--AAGAGA-GCGTTG-GCAGAC-A-GG-AGAACCCTA-TCG-C-----AATCCATA-TT----ATTT-------TCC-T------TGT-C---GAAAT---TCTAGTCTATT-CT-TG-T-CAA-AGCA-AAATAATGAG--A-TATTATG--GAT-A-A----TG---A------TGAATGAGG----------AA----GGAGCA-CAA-AATCTC-CCA---ATAT-CAGA-CG-AC-AC-T---TT----T-TGGCTCTGGATGGTTCCCCAAAATCTCT--TTTTGC----TGCTCTT-GA--A-CAAGT-AAA-TTATCACTC-TA---C--TTTT-CTGGATTACAAA-TAGGAA---TA-CTC--AAAAAC-AAA-AATAGT-TT-GGATAGGCT--CTAAAAAAT---TTTCTAAA-G-GAGT-A-TACA-CCA-TA--CAA--AGC--AAA--GCTAGAGT--GGG--AT-TACT---ACTAT-CCAATCTTAT-TAGGC-AT-A-GAAT--TT-TC----GTGG--A-TA--TGAA-AAA-ATAGTG-GATTA-----AAAAT--AC----AAT--ATT-CA-ATA--CC--AA-AATTAAA---GCTT-TGATAC-AC-ATCTG-GAATAGAA-GAA----A----AC-C--ACTCCTCATT---GTCGA-GTCCACAG-TTGCTCAAAAGACACACT-GCTT-T-A--CCGTAAGCTTAATC-ATT-TGT-TTAT--TGGC-ACT--A-TACCAAAATTCC------AGAG-AG----------A-TACTT--GTCTCT--CTGAATAGTTTGTTCTTTTTCGAATTTATA----TGG-AT-TCAAAGATT-GACATAGGTT--ATAAAGACAAAC-GT--TACTGGCAA-GAACCGACTT--AAAGTGG--CTTA-AAAATG--T--GAGTGTTGATAAA--ACTTTT---TATAGCATCTTTAAA----G-TAC--ATGCGATAAAAGGGTTAACAAACT--G-TCATTCAAAAC-CATGG-TTAGATATTTTT---CTTTGAAAT-AAT-GCATA-AATGGTGG-T-AC-AAA-T-TGTT--GATTTTGGTGATGATATAT----TT-A-AATGG-T-TATGAA--TCACAGTA--AAGATTTTGG-CAT-GAATG--TTTCCAGTCATTGGTTTGTC-TCCTTTA--AAACAATG-TGGA-TA-AAAA-TC--TCAAGTTC--AAT-T-TTATCGTTCT-GTCCC--A-TATGGT-TAATATCATAATCTC-GT-GTT-GGAAATAAGAGTATTTATG-TTAAAAAATGGCAT-CT-CATGGGTGTG-AAAATAA-TT-GCG-ACTT-TTTAGTATGATGATTGGAAA
gi|10 : cgggctGGTGATTAAACCTAAAC---AATTTT-TTAAAAAACT-GGTGACC--GA-TT-ACATTG--T-------TAAATG-T-CTTATATAA-ACT-TATTTC--AGG-TTGTC--TTAGTAAA--AGAAT-C-AAATCTACTT-TAGG-TCATCTCAAT-TCAG-ACA-CCCAGTC-TG-GATTCATG-AAGG--GAA--GAT--AT--ATTGG-TAAA--AATACCAGATTTATCT-ATGATCT-AATG----CATTATACAGAAA-GTAAT----AAT---AT-TC-CAGGA-C-TA-TTGGTATT-G-A--TA-GACT-TTGAAAAGGCTTTTGA--TTCC-A-TTTCATGG-T-CATTTA-TATATAAA-GT---A-TTG----AA--ATAT----TTTGGATTTGGT-G--A--ATAC-AT-TATT-----G--AAT-GGGTAA-AGATTCT-TAA-
gi|11 : gttacacaacaacttaaatactcTCTG-AAAGTGAAATGTTGTACAGTCT--TGTAAGGATA-G-----GATTAATAACAAA-TACACCAGGA--AGT-GATAGATTTCAACTATTTGGAATTTGTTAAAGTTTTTTTTTTG--AGG--------------ACATCAGAA--GAATTAATTTGT---G--AACG-TGGT-TAAT--CACATTTT-AAGATAAAGAGAGCTT-CCA-ATCTCACAAAGACG-GGG-AT--ATCACT-TGTTT-CCAAAAGGTGAT-GAACCTCGAT---AATTTTCTGAAACATTTTGGCGTCC--AA-TT-AT-CTTCTT-------TAAATG-TGCTTGTACAA-ACTATATAGC--GG--ATGTC--TTAGCTAC--AGAATAC-AAATCTACTCCTTAT-CTAT-T
gi|12 : TG-AAGG--G-AA-GAT--ATCTATAGG-GGAA----TACTCGATTTATTTTATGAGATT-ATG----TCATACACTGAAAGAAACA----GAT---AT-TC-CAGGTCT-TC-TTAGTACT-C-A--T--GATT-TTGAGAAGGCCTTTGA--CT-C-AATGTCATGG-T-CTTTCATT--ATAAA-GT---T-TTA----AA--CTAT----TTTGGTTTTGGG-A--A--A-ACTTT-A-TT-----C--AAT-GGATAA-AGATT-T-TAA-A-TT--CAATT--T-C---AGAG---CTTCAAT-TTTAC--A-A----GTGGATTT--TTA-TCAG-AA--CA---GTT-CGACATA-----------------AC---CAA-AG-GGGTCCCTA-TTA-C-----A--CCATATTTATTCATTT-------TAT-G------TAC-C---GAAAT---TCTTG---------------------------CAA--AG--A-TATAAAG--GGT-ATA----TGT--A------TAAgatacgat
gi|13 : TTT-CAGGTCTAAGGA-TA--AA---TTTTTC--AAAGAC-AAA-AATGGT-GT-GGATAGGTA--GTAAAACAT---TTTCAAAG-G-AGGT-TTTCCA-TCA-TT--CAA--GGT-GGAA--ATTTGACT--GGA--A--CAATGAAACA-T-TGGAT-TTAC-TAGGG-AT-A-AGAT--TCAAC---AGTAA--C-TT--ACAA-GAA-ATGGTT-GAAAT-----GAATT--AT----AAG--ACT-AAATTA--AAG-GA-AATTAAAAAGGTTA-TGAT---GC-A-GTG-GAATAGTA-GAA----A----TCGT--ACTCCT--TTA-GGAAGG-CTA-ACAG-TAA-T--AAAG--ACA-------------CCA-AAATTGAATC-AC
gi|14 : agttctccaacttctatggatgacattattagagtcctagattacttggcaataa---T-CTA----AA--ATAT----TTTGGTTTCGGG-G--A--TTA-TAT-G-TT-----A--GATTGGATTA-AGATT-C-TAA-A-TA--CATAT--TTC---AAAG---CTTCGGT-TCTACA-A-G----GTGGTTTC--CTA-TCTG-AA--CA---GTT-CAATAT-T--GAACGT-G-GTTG--CAGACAA-GG-GG-ATACTG-TTG-C-----A--CCATAT------ATTT-------TTC-TCCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAA-A-CA-AAACAA--AT--A-TATAAAA--GGT-AT-----TGT--AATTT--TAAACGA-T----------AA----AGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AT-AC-C---TC----TCTTGCTCTTGATGGTACTCCTAAGTCATT--ATTCGC----TGCCCTT-GA-TA-CTATT-GAT-TTTT
gi|15 : TTTATGT-ATGACATT-ATG----TCATACACTGAAATAAAC-----AAT---AT-TC-CAGGT-C-TT-CTAGTACT-C-AT-T--GATT-TTGAGAAGGCCTTTGA--CT-CAA-TGTCATGG-T-CTTTCA-TCTATAAA-GT---T-TTA----AA--CTAT----TTTGGTTTTGGG-A--A--CAAAAAT--ATT-----C--AAT-GGATAA-GGATT-T-TAA-ATTC--CAATT--T-C---AGAG---CTCCGAT-TTTACA-A-A----ATGGATTT--TTA-TCTG-AA--CA---GTC-CAACATAC--AA-AGA-G-GGT--GTAGAC-A-GG-GGGACCATG-TT--------------TATTC----ATAT-------AAT-G------TGC-C---GAGAT---TCTTG-C-AAT-AT-TAAT-TAA-A-CA-AAACAA--
gi|16 : -AAAG-GAGCTC-ACT-ATTTCATAAAGATT-AGG-AATAATCTCA-TGTTTGCCAAAAAGTGAC-AGACACGGACACAAAATTT-TGGAAAAC-T-GATGTCC--TA-TA-ACATTC--G-------GAAATG-T-CTTATGTAA-ACT-TATATA--AAA-ACGTA--TAAGCTAC--GGAAT-T-TAATATAC-GCTAGA-TTAT-ATAATATCAG-GTA-CTCAAAC-TGTC-TTTCTGAAAGG--A-A--GAT--GC--AT--G-A-AA--AATA
gi|17 : ttttcttttttttgggggggggggggttgatttttaaaatattcatagtacaaagaataaataacatatatattcc-GATTTTGGTGATGA-A-ATAGTGTTAA-AATG--T-GATG-AATCCACAGTAT-GAG-TTTCGG-CACTG-ATG-TTTTCCAGTC-TTGG-TTGTC-TATGGTG--AAACAA-GATGGAATATATAA-TCATTC-AGTTCAAAATATGTT----TTCT-GTTCCCAG-TATG-TATAATA-CA-AATATC-GT-GTTTGGAAATAAA-GTATTTATG-TTAAAACATGGCA-GCTCCAT-GGTGTGAAAAATAA-TTGGCG-ACTTCTTTAGAATGAGAA-TGGAAAaaa
gi|18 : GA-TG-AT-AC-A---TCAT--C-TTGCCCTTGATGGGAATC-TAAGTCACT--TTTT------TAGCTTTAGA-TA-CGTTTAGAG-TTTTTTCTC-CA---AAGCTTT-CTGGTTTTAAGG-TA--AACTGTACC-----AAAAC-AAA-AATTGT-TTTGGATCGGAT--CAAAAAA-----TTTCAGAT-C-TGGTCTTTTCA-TCA-TT--C-A--GAT-GGAA--ATTG--CT--GGG--CT-CAACA--ACT-T-TTAA-CTTAC-TAGGgt
gi|19 : gcgcG-T-CTTTTGTT-TATAAG-GT---T-TTA----AGGTTTCT----TTTTAATGTGGT-ACAA--ATACGAT-AATTTTATAA--AATTGGATGA-A-ATT-T-TAA-A-TA----ATT--T-T---AAAG---CTTCTAT-TCTTCA-A-A----GTGGCTTT--TTA-TTAG-AA--GA---ATT-T--CAT-------TGA-T-GTCG-TC-----A-GG-GAGACCCTG-TTT-C-----T--CCGTA--C----ATTT-------TTC-TTCTTTGTGC-A---GAAAT---TCTTG-CAATT-CT-C-AT-TAA-A-CA-AAAccaaaactaatataggtttttt
gi|2 : TGGATAGGGGAAGGGGAGGAAACCTTCGAAGTACTTTTGTAGGTCTCGAATTTCTAGGA--ATTATTTAAAC-AAATAACTTTAAAAAAGtcatgat
gi|2 : tatgataagatctcgtgctcgccAAGTTA---GACAGGCATTATCCACAAT---CTGGAGGGGTGAAATTAT-TA-GAGGAGAGGTTCT-TA-ATTGTACTA-AAAAATA-ACATGAAAA-AATAACAAAATCTTCCTAGAGTAGCCGATGG-TTACA--CAACAG-AATTC-TTCAATTTTTTTT---GGAATG--------------ATATTAAAA--TATTTA---TGT---TGTAAAG-AGCCATAAAT-TGTATTTTTGTAA-GAGG-AAACTT-CCCTACTTCACAAAGACTAGGA-ATTATTT-CT-TGTTTACCTAAAGGTGAC-AAGCCAAGAC---AGTTTT-ATAACAA-TT-GGAGGCC--AA-TTTACACTT--T-------TAAATGGTACT-ATACAACAAT-TATATTCTGCG-TTGTC--TTAGCTACTCAGAAT-A-AAAAAAAGTTTTGGAATTAT-TTAATATATG-ATA-CACAGTC-TG-GGTTTTTG-AAGG--A-A--GATTAAT--ATAGGGAGAG--AATACTCGATTTATTT-ATGACATGTATG----CATTACACTGAAAGGAAAC----AAT---AT--C-CAGG--T-CATCTAGTACTTC-A--T--GATT-T-GAGAAGGCCTTTGA--CT-C-A-TG-CATG--T-CTTTCATT-TATAAG-GT---G-TTA----TA--CTAT----TTTGGTTTTGGG-G--A--A-ACTTT-A-TTCC---A--AGT-GGATAA-AGATT-T-TAA-A-CT--CAAAT--TTC---AGAGG--CTTCAAT-TTTACA-G-A----GTGGATTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAAAGA-G-GGGGTGTAGAC-A-GG-GGGACCCTA-TTG-CCA---G--CCATATTT----ATTCATATTTATGC-T------GGC-C---GAAATA--TCTTG-CCAATAGT-TAAT-TAAGA-CA-AAACAA--AGGTA-TATAAAG--GAT-ATA----TGT--A------TAAA--A-A----------AACACTGAAACA-TAAGGTTATC-ACAAT-ATATGCAGA-TGAAT-AC-T---TCCCCAC-TAGCCCTTGATGGTTTCACAAtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacaatactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|2 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgtt--AA---TA-CTCCTAAAAAC-TAA-AATTGT-TT-GATTTGGTTTGCAAAAAAAA---ATTCTGAA-CCAAGT-TTTCCA-CCA-TTACCAA--GAT-GGGA--AATAGATT--GGGTGATCAACAA--ACC-T-TTAAT-TTAT-TAGGT-AT---TAATGTCT-TT---GATCG--A------GAA---A-ATTGAA-GATTTT----AAATT--TTT---GGA--CTC-CAAATT--CCT-AA-AATTGTT---GCTC-TGATTAAAC-A-GTG-GAGGAGA--GAATTC-A----AT-T--ACTCCT-ATT--GGTCGG-GT-CACTG-TGA-TTTAAA----CCTT-GCTTAT-TTGCCA-AAATTAAATC-ATT-TGT-TCATA-T--C-TGT--CGTTCCTAC--TCCT-AAA-AAGG-AGGACAATTTCAA-TATTT--ATGCC-------AAAATTT----TATTCG-AATTCTTG----TGG-AAGTCTAGTGT-AGATA-AAGTC---CAAGAG---GTCGTAATAAC-CCAA-G-ACATATCTTATCAGTG-----TATAAGATG--T--AGGTA----TAAACCAACTTTAATTAT---ATCCCTGAA----GATGCTCATG-GATTAAAAGGCTTACTAAGTCAGATTGTCATAAATTCTTGGATTA-ATA-TTTTGTGCTGTG-----TATGGAAATGAAT-ATTC-TTATGAAG-TATAT---GATTTTGGAGATAT-TTAT----TGAAGAATGG-tactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|20 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacGAAAGCTGG--CTTA-AAATGG--TTGGAGTG------AA--AACGTG---TAT---ATTTTTAAA----T-TAC--ATATGATCAAA-CGTTAACAA-CT--G---GTTACAAAC-CATGG-TTAGATA-TTTT---CTTTG--ATCC-TGGCAAC-AA--GTGG-T-ACAAAATT-TGTTA-GATTTTCGTGATGA-ATATG---TTAA-ACTGG-TATATG-A--TCATAGT---GAT-GCTTGG-CAA-G-ATG-TTTT-CAGTGATgttttgcaaggaaaaaaatgagca
gi|21 : -AAGG--A-A--AGA--AT--ATGGA-AGAG--ATTGCAAGATTCATTT-CTGATTCAGA-------ATTATAAT-AACTGGACT--------------------T-T-TA-GTATTATT------T--GATT-TGGAGGAAGCCTTTGA--TT-CTA-T-TCCTGG-T-CATATATT-TATGAA-GTACAT-GTATAAGAA--TTGT----TT-GGATTTGGA-G--A--Agtt
gi|22 : catctcattttggatgatacCAG-GG-GTGATCCTG-TTG-C-----G--CCATAT------ATTT-------TTC-TGCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-AT-----TGTG-A------TTAATGA-T----------AA----AGAACA-TAA-CTTATC-TCA---GCATGCTGA-CG-AC-AC-T---TC----T-agtacgacgtcttatttacggagtaaagat
gi|23 : TGCCTAAAGGTGAT-AAACCAAGAC---AATTTT-TAAACAAC-T-GGCGTCC--AATT--ACACTT--T-------TAAATG-TAC-CATACAA-GTT-TATGTC--GGG-TTGTC--CAAGTTTC--AGAAT-T-TAA-CAGGTCTTGGA-TTAT-ATAATTTCTG-ATA-cttg
gi|25 : aAATATG-----AAA-AATAACAAA-TCT-CCAGGT--AGT-GATGG-TTATA--GTGTTG-AATTT-TTAAA--TTTTTT---GGGGGT--------------AGATCTGAAAGAAATTA---TAT---T--AAAGTCAAT-TAATTGTATATTCTCCA-A-AAAG-GAGCTT-CCC-AT
gi|26 : CTAGAGTAGGGG--ATGTACTA--ACT-T-TCAA-CTTAT-TA-GC-AT-AGGAAT--TG-TC---TGTGG--A-GTAGAGAATAAATATAGTT-GATTT-----AAATT--ACAAATGGAGGGTG-CAGATACGCCA-AAGAGTTAA
gi|27 : -TTTTCCAGTCAT-GG-TTGTC-TATGGTG--AAA-AA-A-TGGA-TA-ATAA-TCATTC-AGTCCAA----T-TTATTATTTTTGTCCC--AATATGGTATAATA-CA-AATCTCTGT-GTT-GGAAgt
gi|3 : TACTTC--GC-TTAT-TTG-TATCGG-ATA-GTCAAGGGTT-G-TTTATA-AAGGTCG-A--CAT--AC--ATTGG-AAGAGTAATGCAAG-TTTGTGA-A-GATCTCG-TGC---TCTTTCACTGAATTGGACC----AAT---A---CACAGGG-A-TA-TTTGAACT-C-A------GTT-GTGAAAAAGCTTTCGAGACT-C-A-TATC-TGGAT-AGTTTAT-CTATAAA-GT---T-CTA----AC--CTATCTACTTTGGATTTGGA-G--A------------------------T-GGTGTA-AAATT-TGTAA-A--A--CAAAC--CAT---AGAGGAACATCTGTACTTACA-A-A----GCGTATTTCCTT--TCAT-AA--CACATATTGCATTATAC--CAGAG--G-GTTG--CAGACAA-GG-AGTATCCTA-TGA-CTAGCGA--CCATTTTT----GTTA-------TTC-A------TGG-C---AGAATGTATCTAG-CTATTTCT-TG---CAA-G-CGCAAATAA--AG--A-TATTAA---GGTGATA----TGT--A------TGAATGA-T----------GC----GGAGCAACAA-AATCTC-TCA---ATATGCAGATCT-ACCAC-A---TT----T-TGGCTCTTGATGGTTCCCCAAAATCTCT--TTTTGCGTTATGCTCTT--A-TA-C-ATT-AACACTTTTACTC-TA---C--TTTTTCTGGATT-CAAA-TA--AA---TAGCTC--CAAAA--AAA-AATAGT-TT-GGATAGGCTT-CTAAAACAT---TT-CT-AA-G-AAGT-ATATCA-CCA-TA--CAC--AATAGGAAATGCTGGAGT--GGG--ATGTACTT---CT-T-TCAAGCTTAT-TAGGGCATTG-GAAT--TT-CT---TGCCG--A-G---AGAATAAA-AT-GCAAGCTTTTTTCTAAATT--AC----AAT--ATTTCAGATA--CCA-AA-AAATAAA---GCTTATGATACA-----GTT-GAATAGAAAGAA----A----ACTC--ACTC-TCATT---GTCGG--CGCACAG-TTG-CCAAAA----CACT-ACTTTT-A--CCT-AAGCTTAATCCATC-TTTGTTAT--G--C-ACT-----GCCAAA--TTCA-AGATAAAG-AATA--------A-TGTCT---TCTCT---TGAATAGTTT----TTTT-----TTTATTACTATGG-A-ATTCAAGATT-GACA-GGGTT---CAAGA-CAAACTGT--TACT-CCAA-G-ATTCACTTGAAAAGTGG--CTTA-AAAATGGTT--GAGTG-----AAA--AACTT-----------CCTTTAAAGACTG-TAC--ATGTGATAAGAACGTTAACAAACT--GATC---ACAAAC-CATGG-TTAGATA-TTTT---CTTTTAAATCCATGGCAAC-AAT-GTGGCT-ACAAAA-T-TTTTGCGA-TTTGGTGATGA-ATATC---TTAA-AATGGTT-TATG-A--TCACAGTAATGAG-TTTTGGCCAT-G-ATGTTTTTCCAGTCATGGG-TTGTCGTATGGTGAAAAACAA---TGGA-TA-ATAATTCATTC-AGTTCAAAAGAT-TTA----TCT-GTTCC--G-TATCGTATAATA-CA-AATATCTGTCGTT-GGAAATAAAAA-GCTTATGTTTAAAACATGACATGCT-CAT-GGT-TG-AAAATAATTTGGCGAACTTTTTTAG-ATGAAGA-TGTAAA
gi|30 : -G-----AAA-AATAACAAA-TTT-CCGGGA--AGT-GATGG-TTTTA--CAGTTG-AATTT-g
gi|4 : atAAAAACCT-G-CGTCCCCAA-T--ACACTT--TCTTTTACTGAATG-T-CTTGTATAA-ACT-TATATC--AGG-ATGTA--TAAGCAAC--AGAAT-T-ACATCTACCACTAGA-TTA--TTAATATCAGCGTAGCTCAAAC-TG-GCTTTCTG-AAAGCTG-AATGAT--AC--ATAGG-AGAA--AACACTAG-TTTATTT-ATGATCTTGATGTTTTTCTTTCACAGAAA---GCT----AACCAAAT-TC-CAGGA-T-TA-CTAGTACT-T-T--TTGGATTCTTGAAAAGGCTTTTGA--TT-CAA-TTTCTTGG-TCCTTTTATT-TACAAACGT---T-TTA----AA--ATAT----TTTTGGTTTGCG-G--ATCATACTGT---TT-----ACGATT-GGATTA-GAATT-C-TGA-A-CA--CAAAT--T-CTCAACAG---CTTCGGT-TCTACATA-G----GTGCGTTT--CTATTCTGCAA--CA---GTT-CAAAATGTTGAACGTC-G-G-TG-GCAGACAACGGCGGCATCCTGTTTGTC-----A--CCATATAT----TTTC-------TCC-T------TGTGCTTAGCAA----TCTGG-CT-CT-CTCTGATGCAA-A-CA-AAACAA--AG--ACTATAAAATTGCT-ATCTTGTTGC--A------TTAACGA-TTTTTCTTTTAAA----CGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AC-AC-TTCCTC----T-TCTCCTTCGAATGTACTCCTAAGTCTTTA-TTCCGC----TGCCCTTCGATTACCTATT-GAT-TTTTTTCTCAAA---A--TTCT-CAGGACTCCAAA-TA--AA---TACTTC--AAAAACTTAA-AATTATCTC-GGATT-GAT--CAAAAAAAT---TCTCGGCATG-AAGTCATTTCATCCATTT--CGACCGAT-GGAA--GCTGGATTG-GGG--ATGCACTG--ACT-TCTCA--TTTATATAGGA-AT-A-C-AT--TT-TCGAGGGTAGACA-TT----AAC-AA-ATTACG-AA-CT-----AAATT--AT----GGA--ATT-CAGATA--CCA-AA-AATAAAA---GCTA-TGATACAAC-A-GTGCGAGAAGAA-GCC----G----AT-CTAACAC--CAATA-GGTCGGTGTA-ACAGCTTG-TT--AAG--ACACT-ACTTGTCC--CCA-AAACTCAATC-ACC-TTT-TTAT--T--CTCCT--C-TACCAAA--CCCTAAAA-AAAG-AG----------ACTATTTTCATCATTAAGTAAAGAGTTA----TTTC---AATTCATT----TGA-ATGCCTAACATCAGATA-AAGTCAAACAAGAAC-AACTGT--TA---CCAACG-ACCTATTTGAAAAGGGGGTCTCT-AAAATG--
gi|5 : AGATGGGTGGAGGAGAGCGAG-AAATCCACTAAATATTTCTGT-AACCTAGAA--TCTAGAAACACTCCTT-AA--AAACAA--TCAAAAAAGGGTTAAAACTATCGAAAAGGTAATG-ATTGATACTCATTCGGA-CATgtgcgttcgattatttactaaatttattatttctcttgaaatgttcatggata
gi|5 : cacgatcaTG-AACGTGAAATTTG-T-TAGCGT--TA-AAGAATATG-----AAA-AACAACAAA-TCAACCGGGA--AA--GATGG-ATTTA--CAGCAG-AATTT-TACAAGTTCGTTT---GGAATGAAGCTATTTATTAAAGATGTAAA--GATCTA---TATTACA--AAAG-CACT-TCA-T-CATATATTTCAGT-GTAT-ACATTTGCCA-GCATCACAAAGACT-TGAGATTA--TACTATGTTAACACAAGGGAGAT-AAAGC-AGAG---AGTGTT---AAAAA--T-GGCGACC--AA-TA-ACTCTT--T-------TAAA-A-TATTTCTGCAgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggtgaacgtgaaatttgttagcgttaaagaatatgaaaaacaacaaatcaaccgggaaagatggatttacagcagaattttacaagttcgtttggaatgaagctatttattaaagatgtaaagatctatattacaaaagcacttcatcatatatttcagtgtatacatttgccagcatcacaaagacttgagattatactatgttaacacaagggagataaagcagagagtgttaaaaatggcgaccaataactcttttaaaatatttctgcacggtgcttttaacaaattatacttctttctatctggtctt
gi|6 : cacgatcaagatgggtggaggagagcgagaaatccactaaatatttctgtaacctagaatctagaaacactccttaaaaacaatcaaaaaagggttaaaactatcgaaaaggtaatgattgatactcattcggacatgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-CATAAAA--GGT-AT-----TGTG-A------TTAACGA-T----------AA------AATA-TAA-ACAATC-TCA---GTATGCTGA-CG-AC-AC-T---TC----TCTTGCTCTTGATGGTACTCTTAAGTCCTT--ATTCGC----TGCCCTT-GA-TA-CTATT-GAT-TTTTT-CTC-AA---AA-TTCT-CAGGACTAAAAAATA--AA---TATTTC--AAAAAC-TAA-AATTAT-CT-GGATTGAAT--AAAAAAAAAAAATCTCGGAT-G-AAGT-ATTTCA-TCA-TT--CGA--GAT-GGAA--GCTGGACT--GGGG-ATGCGCTG--A-T-T-TCAATCT-AT-TAGGA-AT-A-TATT--TT-TC---GGTAG--AATT--AGA-CAAA-ATTATG-GAACT-----AAAGT--AT----GGA--ATT-CAGATA--CCA-AA-AAGAAAA---GATG-TGATACAAC-A-GTG-GAGAAGAA-GGATTCTA----A--C--AC----CAATA-GGTCGG-GTA-ACAG-TTG-TT--AAG--ACACT-ACTTAT-C--CCA-AAACTTAATC-ACC-TTT-TTAT--T----TCT--C-TACCAAA--CCCT-AAA-AAAG-AGA---------A-TATTTC-ATCATTAAGTAAAGAGTTT----TTTC---AATTCATC----TGGAATGCTGA--ATCAGATA-AAGTC-AA-AAGAAC-AACTG-----------A-G-A-TTATTTGAAAGGGGGT-CTTA-AAAcggtgcttttaacaaattatacttctttctatctggtctt
gi|7 : AATGGAATGCGGAAA---AT-TC-CACGT-C-TT-CTAGT--T-T-AATT--GATT-TTGAGAAGGCTTTTAA--CT----------TGG-T-CCTTCA-GATATAAA-GC---T-TTC----AA--GTAA----TTTGGTTTCGGA-T--A--ATATT-T-CATT-----C--AAT-AGATAAGATATT-T-TAAGA-CA--CAGATA-T-C---AGAG---CTTTCAT-TTTACA-AGA----GTAGAGTT--TTA-TCAG-CA--TA---GTT-AGATATAC--AA---ATG-GTAT-GTAGA-AA---------------TG-C-----A--CCATATTT----ATTT-------CTCATATG---TGC-T---GGAAT---------------------T-CAA-A-CA-AAACAA--AA--A-TATAAAA--GAC-ATA----TGTTCAGTGTATTGAA-AA-C----------AC----AGAACA-TGA-TATATCGCCATATATATGCAGA-AT-AT-AC-T---TCA---G-TAGCTCTTCATGGTTTAACTGCATCCCTGGTATTGG----TG--TTT-GA-TA-CAATA-GAA-TTTTT--TG-TACAGT--TTTT-CTGGTCTAAAGA-TT--AA---T-TCTT--CTACAC-GAATAGTGGT-CT-GGATTGATT--AAAAAAAA-----TTCAGAA-C-CAGT-TTTTCA-TCA-TA--GAA--GAT-GGAA--ATTGGATT--GAG--G-GTTCTT--AAT-A-TCTAACTTAT-TGGAT-AT-T-CAAA--TT-TC---TGTTG--A-tggt
gi|8 : cAGGA-T-TA-CTTGTGCA-C-A--TA-GAAT-TTGAAAAAGCTTTCGA--CT-CCA-TATCTTGG-A-AGTTTAT-CTAGAAA-GT---A-CTT----AA--TTAC----TTTGGATTTGGG-G--A---TAATAT-AATT-----A--CAT-GGGTTA-AAATT-T-TAA-A-TA--CAAACAAT-----AAAG---CATCTGT-ATTACA-A-ATTAAGCGGTTTC--CTT-TCAG-AA--CA---AAT-TGAGATAC--A-GAGA-G-GTTG--CAGACAA-GG-AG-ACCCTA-TCG-C-----A--CCATATTT----ATTTA------TCC-TATG---TGC-A---GAAAT---TCTAG-CTATT-CT-TG-T-CAA-G-CA-AAATAA--AG--A-TATTAAA--GGT-ATAA---TG---A------TGAATGA-T----------GA----AGAGCA-CAA-AATCTC-CCA---ATATGCAGA-CG-AC-ACAT---TT----T-TGGCTCTAGGTGGTTCCCAAAAATCTCT--TTTTGC----TGCTCCT-GA-TA-CAAT--AAA-TTATTACTT-TA---T--TTTTTCTGGATTACAAA-TA--AA---TAGCTC--AAAAAC-AAA-AATAGT-TT-GGACAGGCT--CTAAAACAT---TTCCTAAA-G-AAGT-ATATCA-CCA-TA--CAA--GAT-GGAA--
gi|9 : AA-ATTGAA-GATAT-----AAATTTTA-----GGA--ACT-CAAATT--CCTTAA-AATTGTT---TCTC-TCATTGAACGA-GTG-GAAGAGAA-GAA----ATTCTAT-T--A-TCCTTACTCTGGTCGG-GTACACTG-TGA-TTAAAA----CACTTGCTTAT-T--CCA-AAATTAAATC-ATTGTGT-TCATAAT--C-TCTTGC-TACT-----CCTT-ATA-AAAGTAC----------A-TATc
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): GCTTACTAATCAGAATGTCATAAATCTTGGGATTAATATTTTTTTTGCTGTGTATGGAAATGATATTCTTATGAAGTTATTATGATTTTGGAGATAGTTTTTATGATCAGAAGATGTTTCTTAAGGAAAAAA
Unaligned ( gi|28 ): TCCCTACTTCCAAACGGGATACAATTTCATACTTATAAATTCAAAATTTTATTTCGATTCTTACGGAAATCTAATAGTTTATGGTAACACAAGACTATCTATC
Unaligned ( gi|29 ): CTTGAGCAGAAAGAAATGAAAAGTGGTCTATTTCATGCCATGCTTTGGATG
Alignments
lowQualScore : 1 22 1 222 11 1 22 222 11 222 1 1 222 222222 222 2222 1 1111111 22 1 2222222 11 1111 1 11 111 44444444444444 11 11 111 222222 111 111 111 11 22 1111111111 1 111 2222 2222222 111111 2222222222 11111 1111 222222222 1 1 222 3333333333333333333333 22222222 111 3333333333333333333 11111111 111111 444444444444444444 11111 111 2222222222222 22222222222222222 2222222222222222222 111 222222 11 1111 1 1 222222 1 11 1111 11 11111 111 11 1111 1111 33333333333333 11111 11111 22222222 11 111 444444444444444444444444444 11 11 2222 111111 22222222222222 11 4444444444 33333333333 1111 2222 11111 11 3333 111 22222222 11 11111 33333 11 3333333333 222222 11 1 2222222 1 1 1 111 2222222 11 11 111 1 111 222 3333 1 1111 222 1 1 11 1 1 1 11 222 1 1 1 1 11111111 2222 1 2222 1 1 1 1 1 111 1 11 1 1 1 1 1 1 2 1
lowQualScore : 2 00 3 1 555 1 88 1 3 55 555 88 222 1 1 5 1 1 1 5 111 999999 1 111 2222 1 6 0 0 2222222 33 0 0 2222222 6 6 22 2 999999 6 2222 6 3 1 00 444 77777777777777 8 00 11 1 444 666666 99 1 8 444 777777 6 6 77 1 8 8 0 6 6 8 3 1 88 6 000 000 99 5 0 999 5 66 3 7777777777 5 3 3 5 5 77 66 77 1 77 000 1 11 2 5 5 1 4 5 5 1 6 3333 1 5 0000000 000000 5 5 0 7777 1 5 1 5 1 5555555555 0 2 7 0 22222 8888888 4 1111 4 0 777777777 4 1 55 4 6 4 7 0 3 3 1 333 3 66666 7777 666 7777 1 3 44 5555555555555555555555 7 1 3 2 3 7 3 88888 33333333 111 1 4 4 4 8888 1 1 55 55 4 55 777 4 1 1 4444444444444444444 0 6 3 3 7 3 3 77777777 000000 999999999999999999 00000 000 2 0000000000000 3 3 3 3 55 55 4 555 4 88888888888888888 2 8 7777777777777777777 4 4 1 4 333 1 4 4 4 88888 222222 1 1 11 1 11 0000 0 5 5 5 55 66 2 66 444444 0 0 0 44 5 66 777 9 66 55 4 1 4 4 1 1 00 1 2222 11 777 99 4 4 777 66 4 66 1 00 44444 222 4 4 33 4 66 3333 66 5 6666 1 44444444444444 5 22222 44 77777 11111111 66 5 2 66 00 5 000 66 7777 555 5 1 5 555555555555555555555555555 66 55 5 1 5 44 0000 66 888888 5 1 5 6 1 6 99999999999999 3 99 00 1 6 6 5555555555 6 22222222222 1 1 7777 5555 88888 8 99 1 77 77 8 2222 999 3 55555555 8 8 44 2 55 6 55555 66666 33 5555555555 777777 33 0 1 88 3 3333333 0 0 0 0 2 0 777 4444444 2 00 33 111 0 111 0 444 0 8 0 3333 0 8 8 0 4444 777 0 0 44 0 88 0 9 0 0 33 2 666 0 0 0 3 0 33333333 5555 0 1111 2 3 0 0 1 5 0 0 000 3 44 3 3 6 3 3 6 3 2 6 1 3
lowQualScore : . .. . . ... . .. . . .. ... .. ... . . . . . . . ... ...... . ... .... . . . . ....... .. . . ....... . . .. . ...... . .... . . . .. ... .............. . .. .. . ... ...... .. . . ... ...... . . .. . . . . . . . . . .. . ... ... .. . . ... . .. . .......... . . . . . .. .. .. . .. ... . .. . . . . . . . . . .... . . ....... ...... . . . .... . . . . . .......... . . . . ..... ....... . .... . . ......... . . .. . . . . . . . . ... . ..... .... ... .... . . .. ...................... . . . . . . . ..... ........ ... . . . . .... . . .. .. . .. ... . . . ................... . . . . . . . ........ ...... .................. ..... ... . ............. . . . . .. .. . ... . ................. . . ................... . . . . ... . . . . ..... ...... . . .. . .. .... . . . . .. .. . .. ...... . . . .. . .. ... . .. .. . . . . . . .. . .... .. ... .. . . ... .. . .. . .. ..... ... . . .. . .. .... .. . .... . .............. . ..... .. ..... ........ .. . . .. .. . ... .. .... ... . . . ........................... .. .. . . . .. .... .. ...... . . . . . . .............. . .. .. . . . .......... . ........... . . .... .... ..... . .. . .. .. . .... ... . ........ . . .. . .. . ..... ..... .. .......... ...... .. . . .. . ....... . . . . . . ... ....... . .. .. ... . ... . ... . . . .... . . . . .... ... . . .. . .. . . . . .. . ... . . . . . ........ .... . .... . . . . . . . . ... . .. . . . . . . . . . . .
lowQualScore : 0 00 3 0 777 0 33 0 3 33 777 00 000 0 0 5 0 0 0 5 000 555555 0 000 5555 0 7 0 8 5555555 88 0 8 7777777 7 7 00 2 555555 7 2222 7 3 0 66 000 00000000000000 8 22 00 4 000 000000 44 0 0 888 111111 7 7 77 0 0 0 8 0 0 0 7 0 00 6 000 444 66 0 5 111 0 99 6 1111111111 0 1 9 7 7 99 77 99 0 99 444 7 22 8 0 0 7 0 7 7 0 7 3333 0 0 9999999 888888 5 0 2 4444 0 0 0 0 4 0000000000 8 5 2 9 11111 4444444 4 0000 0 3 666666666 0 2 55 0 0 0 3 8 6 6 0 777 6 55555 1111 999 1111 0 3 66 8888888888888888888888 3 0 6 6 6 3 6 55555 44444444 000 0 0 0 0 5555 2 0 55 11 0 55 000 0 4 4 3333333333333333333 8 5 6 6 4 6 6 44444444 333333 555555555555555555 55555 000 3 5555555555555 3 3 3 3 00 55 0 999 0 44444444444444444 3 2 7777777777777777777 4 4 0 4 999 0 0 0 0 77777 444444 0 0 11 2 99 6666 0 0 0 9 44 00 4 33 666666 0 8 8 44 0 11 888 7 11 88 4 0 4 4 0 0 66 0 7777 99 222 99 4 4 111 11 4 11 0 66 44444 666 4 4 00 4 00 2222 99 0 4444 0 66666666666666 0 11111 99 55555 00000000 99 0 2 99 55 0 000 77 7777 999 7 0 7 111111111111111111111111111 44 00 7 6 7 44 6666 11 333333 7 0 7 7 0 7 55555555555555 5 22 22 8 7 7 0000000000 7 88888888888 4 0 0000 8888 00000 0 22 0 66 00 0 2222 222 8 00000000 0 0 66 5 88 7 88888 88888 88 2222222222 555555 88 5 0 00 2 0000000 8 2 0 0 5 0 555 8888888 5 22 22 000 5 000 2 000 8 0 8 0000 8 0 0 0 8888 000 0 0 22 0 88 8 2 0 0 88 5 555 0 0 0 2 0 88888888 5555 0 8888 5 2 0 0 0 5 0 0 000 3 00 3 3 7 3 3 7 3 0 7 0 3
consensus : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTT-AAC-AAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AA-T--ACACTT--T-------TAAATG-TACTTATACAA-ACT-TATATC--GGG-NTGTC--TNAGCTAC--AGAAT-T-AAATCTACTTCTNGA-TTAT-TTAATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--G-A--GAT--AC--ATAGG-AGAA--AATACNAGATTTATNT-ATGATCTCGATG----TCTTACACTGAAATGGACT----AAT---AT-TC-CAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-T-CNTTTATTCTATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGGG-G--A--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAA-GG-GGGACCCTG-TTG-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-ATA----TGT--A------TGAACGA-T----------AA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-T---TC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GA-TA-CNATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACTANAAA-TA--AA---TANCTC--AAAAAC-AAA-AATNGT-TT-GGATNGGNT--CNAAAAAAT---TTTCNGAA-G-AAGT-NTTTCA-CCA-TN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--A-TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTACACAG-TTG-TTAAAAG--ACACT-GCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCNCTAAGTGAANAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAA----G-TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
Reference ( family-2981 ) : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTT-AAC-AAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AA-T--ACACTT--T-------TAAATG-TACTTATACAA-ACT-TATATC--GGG-NTGTC--TNAGCTAC--AGAAT-T-AAATCTACTTCTNGA-TTAT-TTAATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--G-A--GAT--AC--ATAGG-AGAA--AATACNAGATTTATNT-ATGATCTCGATG----TCTTACACTGAAATGGACT----AAT---AT-TC-CAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-T-CNTTTATTCTATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGGG-G--A--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAA-GG-GGGACCCTG-TTG-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-ATA----TGT--A------TGAACGA-T----------AA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-T---TC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GA-TA-CNATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACTANAAA-TA--AA---TANCTC--AAAAAC-AAA-AATNGT-TT-GGATNGGNT--CNAAAAAAT---TTTCNGAA-G-AAGT-NTTTCA-CCA-TN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--A-TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTACACAG-TTG-TTAAAAG--ACACT-GCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCNCTAAGTGAANAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAA----G-TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
gi|1 : AAATGGGTGGAAGA-AGGGA--AAACCTAGTAAATATTTCTGT-GCTTTAGA---TCTCGTA--ATTTTTT-AATTAAATA---TCAAAAAAGG--TAAAAC-A-CAAGAAGTCGAGGTATTTATAACCAGTTGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAG------TTCAAAATTCTCTGGA----TAAAGTAATCTGAAAAGTGAAATTTT-TACAA-GTC-TG-AAAAA-A-G-----AAA-AATTACAAA-TCCACCAGGA--A-T-GATGG-ATTCA--T-GTTG-AGTTTCTTTAAG-TTTTTT---GGAAGG--------------A-ATC--AA--GAAATA---TGT---A--GAAG-TGTT-TAATT-CAAATTTTTAAGA-AAAG-GAGCTT-CCA-ATATCACAAAGACT-GGA-TTTAATCACT-TGTTTGCCAAAAGGTGA--AAACCTAGAC---AATTTC-TGAAAAATTT-GGCGTCC---A-T--TCTCTT--T-------TAAATG-TGCTT-TGAAA-ACT-TATATC--GGGCCTGTCTTTTA-CTAC--AGAAT-TAAAATCTACTTCTTGA-TTAT-TTGATATCGG-ATT-GTCAATC-T--G-TTTATA-AAGG--G-T--AAT---C--ATAGT-AGAT--A--ACAAGATTTGTGT-ATGATCTCAATG-----CTTTCACT-AATTGGACT----AAT---ACATC-CAGGA-TACA-CTTGTGCT-CTA--TA-GATT-TTGAAAAAGCTTTCGA--CT-C-A-TATC-TGG-A-AGTTTATTCTATAAA-GT---TCTTA----AA--C-------CTTGTATTTGGGCG--A--ATATTATAAATT-----A--CAT-GGGTTA-AAATT-TCTAA-A-TATTCAAAC--A-T---AAAG---CATCTGT-ATTACA-A-A----GCGGTTCC--TTT-CCAG-AAAGCA---AAT-TGATATAC--AAGAGA-GCGTTG-GCAGAC-A-GG-AGAACCCTA-TCG-C-----AATCCATA-TT----ATTT-------TCC-T------TGT-C---GAAAT---TCTAGTCTATT-CT-TG-T-CAA-AGCA-AAATAATGAG--A-TATTATG--GAT-A-A----TG---A------TGAATGAGG----------AA----GGAGCA-CAA-AATCTC-CCA---ATAT-CAGA-CG-AC-AC-T---TT----T-TGGCTCTGGATGGTTCCCCAAAATCTCT--TTTTGC----TGCTCTT-GA--A-CAAGT-AAA-TTATCACTC-TA---C--TTTT-CTGGATTACAAA-TAGGAA---TA-CTC--AAAAAC-AAA-AATAGT-TT-GGATAGGCT--CTAAAAAAT---TTTCTAAA-G-GAGT-A-TACA-CCA-TA--CAA--AGC--AAA--GCTAGAGT--GGG--AT-TACT---ACTAT-CCAATCTTAT-TAGGC-AT-A-GAAT--TT-TC----GTGG--A-TA--TGAA-AAA-ATAGTG-GATTA-----AAAAT--AC----AAT--ATT-CA-ATA--CC--AA-AATTAAA---GCTT-TGATAC-AC-ATCTG-GAATAGAA-GAA----A----AC-C--ACTCCTCATT---GTCGA-GTCCACAG-TTGCTCAAAAGACACACT-GCTT-T-A--CCGTAAGCTTAATC-ATT-TGT-TTAT--TGGC-ACT--A-TACCAAAATTCC------AGAG-AG----------A-TACTT--GTCTCT--CTGAATAGTTTGTTCTTTTTCGAATTTATA----TGG-AT-TCAAAGATT-GACATAGGTT--ATAAAGACAAAC-GT--TACTGGCAA-GAACCGACTT--AAAGTGG--CTTA-AAAATG--T--GAGTGTTGATAAA--ACTTTT---TATAGCATCTTTAAA----G-TAC--ATGCGATAAAAGGGTTAACAAACT--G-TCATTCAAAAC-CATGG-TTAGATATTTTT---CTTTGAAAT-AAT-GCATA-AATGGTGG-T-AC-AAA-T-TGTT--GATTTTGGTGATGATATAT----TT-A-AATGG-T-TATGAA--TCACAGTA--AAGATTTTGG-CAT-GAATG--TTTCCAGTCATTGGTTTGTC-TCCTTTA--AAACAATG-TGGA-TA-AAAA-TC--TCAAGTTC--AAT-T-TTATCGTTCT-GTCCC--A-TATGGT-TAATATCATAATCTC-GT-GTT-GGAAATAAGAGTATTTATG-TTAAAAAATGGCAT-CT-CATGGGTGTG-AAAATAA-TT-GCG-ACTT-TTTAGTATGATGATTGGAAA
gi|10 : cgggctGGTGATTAAACCTAAAC---AATTTT-TTAAAAAACT-GGTGACC--GA-TT-ACATTG--T-------TAAATG-T-CTTATATAA-ACT-TATTTC--AGG-TTGTC--TTAGTAAA--AGAAT-C-AAATCTACTT-TAGG-TCATCTCAAT-TCAG-ACA-CCCAGTC-TG-GATTCATG-AAGG--GAA--GAT--AT--ATTGG-TAAA--AATACCAGATTTATCT-ATGATCT-AATG----CATTATACAGAAA-GTAAT----AAT---AT-TC-CAGGA-C-TA-TTGGTATT-G-A--TA-GACT-TTGAAAAGGCTTTTGA--TTCC-A-TTTCATGG-T-CATTTA-TATATAAA-GT---A-TTG----AA--ATAT----TTTGGATTTGGT-G--A--ATAC-AT-TATT-----G--AAT-GGGTAA-AGATTCT-TAA-
gi|11 : gttacacaacaacttaaatactcTCTG-AAAGTGAAATGTTGTACAGTCT--TGTAAGGATA-G-----GATTAATAACAAA-TACACCAGGA--AGT-GATAGATTTCAACTATTTGGAATTTGTTAAAGTTTTTTTTTTG--AGG--------------ACATCAGAA--GAATTAATTTGT---G--AACG-TGGT-TAAT--CACATTTT-AAGATAAAGAGAGCTT-CCA-ATCTCACAAAGACG-GGG-AT--ATCACT-TGTTT-CCAAAAGGTGAT-GAACCTCGAT---AATTTTCTGAAACATTTTGGCGTCC--AA-TT-AT-CTTCTT-------TAAATG-TGCTTGTACAA-ACTATATAGC--GG--ATGTC--TTAGCTAC--AGAATAC-AAATCTACTCCTTAT-CTAT-T
gi|12 : TG-AAGG--G-AA-GAT--ATCTATAGG-GGAA----TACTCGATTTATTTTATGAGATT-ATG----TCATACACTGAAAGAAACA----GAT---AT-TC-CAGGTCT-TC-TTAGTACT-C-A--T--GATT-TTGAGAAGGCCTTTGA--CT-C-AATGTCATGG-T-CTTTCATT--ATAAA-GT---T-TTA----AA--CTAT----TTTGGTTTTGGG-A--A--A-ACTTT-A-TT-----C--AAT-GGATAA-AGATT-T-TAA-A-TT--CAATT--T-C---AGAG---CTTCAAT-TTTAC--A-A----GTGGATTT--TTA-TCAG-AA--CA---GTT-CGACATA-----------------AC---CAA-AG-GGGTCCCTA-TTA-C-----A--CCATATTTATTCATTT-------TAT-G------TAC-C---GAAAT---TCTTG---------------------------CAA--AG--A-TATAAAG--GGT-ATA----TGT--A------TAAgatacgat
gi|13 : TTT-CAGGTCTAAGGA-TA--AA---TTTTTC--AAAGAC-AAA-AATGGT-GT-GGATAGGTA--GTAAAACAT---TTTCAAAG-G-AGGT-TTTCCA-TCA-TT--CAA--GGT-GGAA--ATTTGACT--GGA--A--CAATGAAACA-T-TGGAT-TTAC-TAGGG-AT-A-AGAT--TCAAC---AGTAA--C-TT--ACAA-GAA-ATGGTT-GAAAT-----GAATT--AT----AAG--ACT-AAATTA--AAG-GA-AATTAAAAAGGTTA-TGAT---GC-A-GTG-GAATAGTA-GAA----A----TCGT--ACTCCT--TTA-GGAAGG-CTA-ACAG-TAA-T--AAAG--ACA-------------CCA-AAATTGAATC-AC
gi|14 : agttctccaacttctatggatgacattattagagtcctagattacttggcaataa---T-CTA----AA--ATAT----TTTGGTTTCGGG-G--A--TTA-TAT-G-TT-----A--GATTGGATTA-AGATT-C-TAA-A-TA--CATAT--TTC---AAAG---CTTCGGT-TCTACA-A-G----GTGGTTTC--CTA-TCTG-AA--CA---GTT-CAATAT-T--GAACGT-G-GTTG--CAGACAA-GG-GG-ATACTG-TTG-C-----A--CCATAT------ATTT-------TTC-TCCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAA-A-CA-AAACAA--AT--A-TATAAAA--GGT-AT-----TGT--AATTT--TAAACGA-T----------AA----AGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AT-AC-C---TC----TCTTGCTCTTGATGGTACTCCTAAGTCATT--ATTCGC----TGCCCTT-GA-TA-CTATT-GAT-TTTT
gi|15 : TTTATGT-ATGACATT-ATG----TCATACACTGAAATAAAC-----AAT---AT-TC-CAGGT-C-TT-CTAGTACT-C-AT-T--GATT-TTGAGAAGGCCTTTGA--CT-CAA-TGTCATGG-T-CTTTCA-TCTATAAA-GT---T-TTA----AA--CTAT----TTTGGTTTTGGG-A--A--CAAAAAT--ATT-----C--AAT-GGATAA-GGATT-T-TAA-ATTC--CAATT--T-C---AGAG---CTCCGAT-TTTACA-A-A----ATGGATTT--TTA-TCTG-AA--CA---GTC-CAACATAC--AA-AGA-G-GGT--GTAGAC-A-GG-GGGACCATG-TT--------------TATTC----ATAT-------AAT-G------TGC-C---GAGAT---TCTTG-C-AAT-AT-TAAT-TAA-A-CA-AAACAA--
gi|16 : -AAAG-GAGCTC-ACT-ATTTCATAAAGATT-AGG-AATAATCTCA-TGTTTGCCAAAAAGTGAC-AGACACGGACACAAAATTT-TGGAAAAC-T-GATGTCC--TA-TA-ACATTC--G-------GAAATG-T-CTTATGTAA-ACT-TATATA--AAA-ACGTA--TAAGCTAC--GGAAT-T-TAATATAC-GCTAGA-TTAT-ATAATATCAG-GTA-CTCAAAC-TGTC-TTTCTGAAAGG--A-A--GAT--GC--AT--G-A-AA--AATA
gi|17 : ttttcttttttttgggggggggggggttgatttttaaaatattcatagtacaaagaataaataacatatatattcc-GATTTTGGTGATGA-A-ATAGTGTTAA-AATG--T-GATG-AATCCACAGTAT-GAG-TTTCGG-CACTG-ATG-TTTTCCAGTC-TTGG-TTGTC-TATGGTG--AAACAA-GATGGAATATATAA-TCATTC-AGTTCAAAATATGTT----TTCT-GTTCCCAG-TATG-TATAATA-CA-AATATC-GT-GTTTGGAAATAAA-GTATTTATG-TTAAAACATGGCA-GCTCCAT-GGTGTGAAAAATAA-TTGGCG-ACTTCTTTAGAATGAGAA-TGGAAAaaa
gi|18 : GA-TG-AT-AC-A---TCAT--C-TTGCCCTTGATGGGAATC-TAAGTCACT--TTTT------TAGCTTTAGA-TA-CGTTTAGAG-TTTTTTCTC-CA---AAGCTTT-CTGGTTTTAAGG-TA--AACTGTACC-----AAAAC-AAA-AATTGT-TTTGGATCGGAT--CAAAAAA-----TTTCAGAT-C-TGGTCTTTTCA-TCA-TT--C-A--GAT-GGAA--ATTG--CT--GGG--CT-CAACA--ACT-T-TTAA-CTTAC-TAGGgt
gi|19 : gcgcG-T-CTTTTGTT-TATAAG-GT---T-TTA----AGGTTTCT----TTTTAATGTGGT-ACAA--ATACGAT-AATTTTATAA--AATTGGATGA-A-ATT-T-TAA-A-TA----ATT--T-T---AAAG---CTTCTAT-TCTTCA-A-A----GTGGCTTT--TTA-TTAG-AA--GA---ATT-T--CAT-------TGA-T-GTCG-TC-----A-GG-GAGACCCTG-TTT-C-----T--CCGTA--C----ATTT-------TTC-TTCTTTGTGC-A---GAAAT---TCTTG-CAATT-CT-C-AT-TAA-A-CA-AAAccaaaactaatataggtttttt
gi|2 : TGGATAGGGGAAGGGGAGGAAACCTTCGAAGTACTTTTGTAGGTCTCGAATTTCTAGGA--ATTATTTAAAC-AAATAACTTTAAAAAAGtcatgat
gi|2 : tatgataagatctcgtgctcgccAAGTTA---GACAGGCATTATCCACAAT---CTGGAGGGGTGAAATTAT-TA-GAGGAGAGGTTCT-TA-ATTGTACTA-AAAAATA-ACATGAAAA-AATAACAAAATCTTCCTAGAGTAGCCGATGG-TTACA--CAACAG-AATTC-TTCAATTTTTTTT---GGAATG--------------ATATTAAAA--TATTTA---TGT---TGTAAAG-AGCCATAAAT-TGTATTTTTGTAA-GAGG-AAACTT-CCCTACTTCACAAAGACTAGGA-ATTATTT-CT-TGTTTACCTAAAGGTGAC-AAGCCAAGAC---AGTTTT-ATAACAA-TT-GGAGGCC--AA-TTTACACTT--T-------TAAATGGTACT-ATACAACAAT-TATATTCTGCG-TTGTC--TTAGCTACTCAGAAT-A-AAAAAAAGTTTTGGAATTAT-TTAATATATG-ATA-CACAGTC-TG-GGTTTTTG-AAGG--A-A--GATTAAT--ATAGGGAGAG--AATACTCGATTTATTT-ATGACATGTATG----CATTACACTGAAAGGAAAC----AAT---AT--C-CAGG--T-CATCTAGTACTTC-A--T--GATT-T-GAGAAGGCCTTTGA--CT-C-A-TG-CATG--T-CTTTCATT-TATAAG-GT---G-TTA----TA--CTAT----TTTGGTTTTGGG-G--A--A-ACTTT-A-TTCC---A--AGT-GGATAA-AGATT-T-TAA-A-CT--CAAAT--TTC---AGAGG--CTTCAAT-TTTACA-G-A----GTGGATTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAAAGA-G-GGGGTGTAGAC-A-GG-GGGACCCTA-TTG-CCA---G--CCATATTT----ATTCATATTTATGC-T------GGC-C---GAAATA--TCTTG-CCAATAGT-TAAT-TAAGA-CA-AAACAA--AGGTA-TATAAAG--GAT-ATA----TGT--A------TAAA--A-A----------AACACTGAAACA-TAAGGTTATC-ACAAT-ATATGCAGA-TGAAT-AC-T---TCCCCAC-TAGCCCTTGATGGTTTCACAAtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacaatactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|2 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgtt--AA---TA-CTCCTAAAAAC-TAA-AATTGT-TT-GATTTGGTTTGCAAAAAAAA---ATTCTGAA-CCAAGT-TTTCCA-CCA-TTACCAA--GAT-GGGA--AATAGATT--GGGTGATCAACAA--ACC-T-TTAAT-TTAT-TAGGT-AT---TAATGTCT-TT---GATCG--A------GAA---A-ATTGAA-GATTTT----AAATT--TTT---GGA--CTC-CAAATT--CCT-AA-AATTGTT---GCTC-TGATTAAAC-A-GTG-GAGGAGA--GAATTC-A----AT-T--ACTCCT-ATT--GGTCGG-GT-CACTG-TGA-TTTAAA----CCTT-GCTTAT-TTGCCA-AAATTAAATC-ATT-TGT-TCATA-T--C-TGT--CGTTCCTAC--TCCT-AAA-AAGG-AGGACAATTTCAA-TATTT--ATGCC-------AAAATTT----TATTCG-AATTCTTG----TGG-AAGTCTAGTGT-AGATA-AAGTC---CAAGAG---GTCGTAATAAC-CCAA-G-ACATATCTTATCAGTG-----TATAAGATG--T--AGGTA----TAAACCAACTTTAATTAT---ATCCCTGAA----GATGCTCATG-GATTAAAAGGCTTACTAAGTCAGATTGTCATAAATTCTTGGATTA-ATA-TTTTGTGCTGTG-----TATGGAAATGAAT-ATTC-TTATGAAG-TATAT---GATTTTGGAGATAT-TTAT----TGAAGAATGG-tactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|20 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacGAAAGCTGG--CTTA-AAATGG--TTGGAGTG------AA--AACGTG---TAT---ATTTTTAAA----T-TAC--ATATGATCAAA-CGTTAACAA-CT--G---GTTACAAAC-CATGG-TTAGATA-TTTT---CTTTG--ATCC-TGGCAAC-AA--GTGG-T-ACAAAATT-TGTTA-GATTTTCGTGATGA-ATATG---TTAA-ACTGG-TATATG-A--TCATAGT---GAT-GCTTGG-CAA-G-ATG-TTTT-CAGTGATgttttgcaaggaaaaaaatgagca
gi|21 : -AAGG--A-A--AGA--AT--ATGGA-AGAG--ATTGCAAGATTCATTT-CTGATTCAGA-------ATTATAAT-AACTGGACT--------------------T-T-TA-GTATTATT------T--GATT-TGGAGGAAGCCTTTGA--TT-CTA-T-TCCTGG-T-CATATATT-TATGAA-GTACAT-GTATAAGAA--TTGT----TT-GGATTTGGA-G--A--Agtt
gi|22 : catctcattttggatgatacCAG-GG-GTGATCCTG-TTG-C-----G--CCATAT------ATTT-------TTC-TGCTTTGTGT-A---GAAAT---CCTGG-CT-CT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-AT-----TGTG-A------TTAATGA-T----------AA----AGAACA-TAA-CTTATC-TCA---GCATGCTGA-CG-AC-AC-T---TC----T-agtacgacgtcttatttacggagtaaagat
gi|23 : TGCCTAAAGGTGAT-AAACCAAGAC---AATTTT-TAAACAAC-T-GGCGTCC--AATT--ACACTT--T-------TAAATG-TAC-CATACAA-GTT-TATGTC--GGG-TTGTC--CAAGTTTC--AGAAT-T-TAA-CAGGTCTTGGA-TTAT-ATAATTTCTG-ATA-cttg
gi|25 : aAATATG-----AAA-AATAACAAA-TCT-CCAGGT--AGT-GATGG-TTATA--GTGTTG-AATTT-TTAAA--TTTTTT---GGGGGT--------------AGATCTGAAAGAAATTA---TAT---T--AAAGTCAAT-TAATTGTATATTCTCCA-A-AAAG-GAGCTT-CCC-AT
gi|26 : CTAGAGTAGGGG--ATGTACTA--ACT-T-TCAA-CTTAT-TA-GC-AT-AGGAAT--TG-TC---TGTGG--A-GTAGAGAATAAATATAGTT-GATTT-----AAATT--ACAAATGGAGGGTG-CAGATACGCCA-AAGAGTTAA
gi|27 : -TTTTCCAGTCAT-GG-TTGTC-TATGGTG--AAA-AA-A-TGGA-TA-ATAA-TCATTC-AGTCCAA----T-TTATTATTTTTGTCCC--AATATGGTATAATA-CA-AATCTCTGT-GTT-GGAAgt
gi|3 : TACTTC--GC-TTAT-TTG-TATCGG-ATA-GTCAAGGGTT-G-TTTATA-AAGGTCG-A--CAT--AC--ATTGG-AAGAGTAATGCAAG-TTTGTGA-A-GATCTCG-TGC---TCTTTCACTGAATTGGACC----AAT---A---CACAGGG-A-TA-TTTGAACT-C-A------GTT-GTGAAAAAGCTTTCGAGACT-C-A-TATC-TGGAT-AGTTTAT-CTATAAA-GT---T-CTA----AC--CTATCTACTTTGGATTTGGA-G--A------------------------T-GGTGTA-AAATT-TGTAA-A--A--CAAAC--CAT---AGAGGAACATCTGTACTTACA-A-A----GCGTATTTCCTT--TCAT-AA--CACATATTGCATTATAC--CAGAG--G-GTTG--CAGACAA-GG-AGTATCCTA-TGA-CTAGCGA--CCATTTTT----GTTA-------TTC-A------TGG-C---AGAATGTATCTAG-CTATTTCT-TG---CAA-G-CGCAAATAA--AG--A-TATTAA---GGTGATA----TGT--A------TGAATGA-T----------GC----GGAGCAACAA-AATCTC-TCA---ATATGCAGATCT-ACCAC-A---TT----T-TGGCTCTTGATGGTTCCCCAAAATCTCT--TTTTGCGTTATGCTCTT--A-TA-C-ATT-AACACTTTTACTC-TA---C--TTTTTCTGGATT-CAAA-TA--AA---TAGCTC--CAAAA--AAA-AATAGT-TT-GGATAGGCTT-CTAAAACAT---TT-CT-AA-G-AAGT-ATATCA-CCA-TA--CAC--AATAGGAAATGCTGGAGT--GGG--ATGTACTT---CT-T-TCAAGCTTAT-TAGGGCATTG-GAAT--TT-CT---TGCCG--A-G---AGAATAAA-AT-GCAAGCTTTTTTCTAAATT--AC----AAT--ATTTCAGATA--CCA-AA-AAATAAA---GCTTATGATACA-----GTT-GAATAGAAAGAA----A----ACTC--ACTC-TCATT---GTCGG--CGCACAG-TTG-CCAAAA----CACT-ACTTTT-A--CCT-AAGCTTAATCCATC-TTTGTTAT--G--C-ACT-----GCCAAA--TTCA-AGATAAAG-AATA--------A-TGTCT---TCTCT---TGAATAGTTT----TTTT-----TTTATTACTATGG-A-ATTCAAGATT-GACA-GGGTT---CAAGA-CAAACTGT--TACT-CCAA-G-ATTCACTTGAAAAGTGG--CTTA-AAAATGGTT--GAGTG-----AAA--AACTT-----------CCTTTAAAGACTG-TAC--ATGTGATAAGAACGTTAACAAACT--GATC---ACAAAC-CATGG-TTAGATA-TTTT---CTTTTAAATCCATGGCAAC-AAT-GTGGCT-ACAAAA-T-TTTTGCGA-TTTGGTGATGA-ATATC---TTAA-AATGGTT-TATG-A--TCACAGTAATGAG-TTTTGGCCAT-G-ATGTTTTTCCAGTCATGGG-TTGTCGTATGGTGAAAAACAA---TGGA-TA-ATAATTCATTC-AGTTCAAAAGAT-TTA----TCT-GTTCC--G-TATCGTATAATA-CA-AATATCTGTCGTT-GGAAATAAAAA-GCTTATGTTTAAAACATGACATGCT-CAT-GGT-TG-AAAATAATTTGGCGAACTTTTTTAG-ATGAAGA-TGTAAA
gi|30 : -G-----AAA-AATAACAAA-TTT-CCGGGA--AGT-GATGG-TTTTA--CAGTTG-AATTT-g
gi|4 : atAAAAACCT-G-CGTCCCCAA-T--ACACTT--TCTTTTACTGAATG-T-CTTGTATAA-ACT-TATATC--AGG-ATGTA--TAAGCAAC--AGAAT-T-ACATCTACCACTAGA-TTA--TTAATATCAGCGTAGCTCAAAC-TG-GCTTTCTG-AAAGCTG-AATGAT--AC--ATAGG-AGAA--AACACTAG-TTTATTT-ATGATCTTGATGTTTTTCTTTCACAGAAA---GCT----AACCAAAT-TC-CAGGA-T-TA-CTAGTACT-T-T--TTGGATTCTTGAAAAGGCTTTTGA--TT-CAA-TTTCTTGG-TCCTTTTATT-TACAAACGT---T-TTA----AA--ATAT----TTTTGGTTTGCG-G--ATCATACTGT---TT-----ACGATT-GGATTA-GAATT-C-TGA-A-CA--CAAAT--T-CTCAACAG---CTTCGGT-TCTACATA-G----GTGCGTTT--CTATTCTGCAA--CA---GTT-CAAAATGTTGAACGTC-G-G-TG-GCAGACAACGGCGGCATCCTGTTTGTC-----A--CCATATAT----TTTC-------TCC-T------TGTGCTTAGCAA----TCTGG-CT-CT-CTCTGATGCAA-A-CA-AAACAA--AG--ACTATAAAATTGCT-ATCTTGTTGC--A------TTAACGA-TTTTTCTTTTAAA----CGAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AC-AC-TTCCTC----T-TCTCCTTCGAATGTACTCCTAAGTCTTTA-TTCCGC----TGCCCTTCGATTACCTATT-GAT-TTTTTTCTCAAA---A--TTCT-CAGGACTCCAAA-TA--AA---TACTTC--AAAAACTTAA-AATTATCTC-GGATT-GAT--CAAAAAAAT---TCTCGGCATG-AAGTCATTTCATCCATTT--CGACCGAT-GGAA--GCTGGATTG-GGG--ATGCACTG--ACT-TCTCA--TTTATATAGGA-AT-A-C-AT--TT-TCGAGGGTAGACA-TT----AAC-AA-ATTACG-AA-CT-----AAATT--AT----GGA--ATT-CAGATA--CCA-AA-AATAAAA---GCTA-TGATACAAC-A-GTGCGAGAAGAA-GCC----G----AT-CTAACAC--CAATA-GGTCGGTGTA-ACAGCTTG-TT--AAG--ACACT-ACTTGTCC--CCA-AAACTCAATC-ACC-TTT-TTAT--T--CTCCT--C-TACCAAA--CCCTAAAA-AAAG-AG----------ACTATTTTCATCATTAAGTAAAGAGTTA----TTTC---AATTCATT----TGA-ATGCCTAACATCAGATA-AAGTCAAACAAGAAC-AACTGT--TA---CCAACG-ACCTATTTGAAAAGGGGGTCTCT-AAAATG--
gi|5 : AGATGGGTGGAGGAGAGCGAG-AAATCCACTAAATATTTCTGT-AACCTAGAA--TCTAGAAACACTCCTT-AA--AAACAA--TCAAAAAAGGGTTAAAACTATCGAAAAGGTAATG-ATTGATACTCATTCGGA-CATgtgcgttcgattatttactaaatttattatttctcttgaaatgttcatggata
gi|5 : cacgatcaTG-AACGTGAAATTTG-T-TAGCGT--TA-AAGAATATG-----AAA-AACAACAAA-TCAACCGGGA--AA--GATGG-ATTTA--CAGCAG-AATTT-TACAAGTTCGTTT---GGAATGAAGCTATTTATTAAAGATGTAAA--GATCTA---TATTACA--AAAG-CACT-TCA-T-CATATATTTCAGT-GTAT-ACATTTGCCA-GCATCACAAAGACT-TGAGATTA--TACTATGTTAACACAAGGGAGAT-AAAGC-AGAG---AGTGTT---AAAAA--T-GGCGACC--AA-TA-ACTCTT--T-------TAAA-A-TATTTCTGCAgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggtgaacgtgaaatttgttagcgttaaagaatatgaaaaacaacaaatcaaccgggaaagatggatttacagcagaattttacaagttcgtttggaatgaagctatttattaaagatgtaaagatctatattacaaaagcacttcatcatatatttcagtgtatacatttgccagcatcacaaagacttgagattatactatgttaacacaagggagataaagcagagagtgttaaaaatggcgaccaataactcttttaaaatatttctgcacggtgcttttaacaaattatacttctttctatctggtctt
gi|6 : cacgatcaagatgggtggaggagagcgagaaatccactaaatatttctgtaacctagaatctagaaacactccttaaaaacaatcaaaaaagggttaaaactatcgaaaaggtaatgattgatactcattcggacatgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-CATAAAA--GGT-AT-----TGTG-A------TTAACGA-T----------AA------AATA-TAA-ACAATC-TCA---GTATGCTGA-CG-AC-AC-T---TC----TCTTGCTCTTGATGGTACTCTTAAGTCCTT--ATTCGC----TGCCCTT-GA-TA-CTATT-GAT-TTTTT-CTC-AA---AA-TTCT-CAGGACTAAAAAATA--AA---TATTTC--AAAAAC-TAA-AATTAT-CT-GGATTGAAT--AAAAAAAAAAAATCTCGGAT-G-AAGT-ATTTCA-TCA-TT--CGA--GAT-GGAA--GCTGGACT--GGGG-ATGCGCTG--A-T-T-TCAATCT-AT-TAGGA-AT-A-TATT--TT-TC---GGTAG--AATT--AGA-CAAA-ATTATG-GAACT-----AAAGT--AT----GGA--ATT-CAGATA--CCA-AA-AAGAAAA---GATG-TGATACAAC-A-GTG-GAGAAGAA-GGATTCTA----A--C--AC----CAATA-GGTCGG-GTA-ACAG-TTG-TT--AAG--ACACT-ACTTAT-C--CCA-AAACTTAATC-ACC-TTT-TTAT--T----TCT--C-TACCAAA--CCCT-AAA-AAAG-AGA---------A-TATTTC-ATCATTAAGTAAAGAGTTT----TTTC---AATTCATC----TGGAATGCTGA--ATCAGATA-AAGTC-AA-AAGAAC-AACTG-----------A-G-A-TTATTTGAAAGGGGGT-CTTA-AAAcggtgcttttaacaaattatacttctttctatctggtctt
gi|7 : AATGGAATGCGGAAA---AT-TC-CACGT-C-TT-CTAGT--T-T-AATT--GATT-TTGAGAAGGCTTTTAA--CT----------TGG-T-CCTTCA-GATATAAA-GC---T-TTC----AA--GTAA----TTTGGTTTCGGA-T--A--ATATT-T-CATT-----C--AAT-AGATAAGATATT-T-TAAGA-CA--CAGATA-T-C---AGAG---CTTTCAT-TTTACA-AGA----GTAGAGTT--TTA-TCAG-CA--TA---GTT-AGATATAC--AA---ATG-GTAT-GTAGA-AA---------------TG-C-----A--CCATATTT----ATTT-------CTCATATG---TGC-T---GGAAT---------------------T-CAA-A-CA-AAACAA--AA--A-TATAAAA--GAC-ATA----TGTTCAGTGTATTGAA-AA-C----------AC----AGAACA-TGA-TATATCGCCATATATATGCAGA-AT-AT-AC-T---TCA---G-TAGCTCTTCATGGTTTAACTGCATCCCTGGTATTGG----TG--TTT-GA-TA-CAATA-GAA-TTTTT--TG-TACAGT--TTTT-CTGGTCTAAAGA-TT--AA---T-TCTT--CTACAC-GAATAGTGGT-CT-GGATTGATT--AAAAAAAA-----TTCAGAA-C-CAGT-TTTTCA-TCA-TA--GAA--GAT-GGAA--ATTGGATT--GAG--G-GTTCTT--AAT-A-TCTAACTTAT-TGGAT-AT-T-CAAA--TT-TC---TGTTG--A-tggt
gi|8 : cAGGA-T-TA-CTTGTGCA-C-A--TA-GAAT-TTGAAAAAGCTTTCGA--CT-CCA-TATCTTGG-A-AGTTTAT-CTAGAAA-GT---A-CTT----AA--TTAC----TTTGGATTTGGG-G--A---TAATAT-AATT-----A--CAT-GGGTTA-AAATT-T-TAA-A-TA--CAAACAAT-----AAAG---CATCTGT-ATTACA-A-ATTAAGCGGTTTC--CTT-TCAG-AA--CA---AAT-TGAGATAC--A-GAGA-G-GTTG--CAGACAA-GG-AG-ACCCTA-TCG-C-----A--CCATATTT----ATTTA------TCC-TATG---TGC-A---GAAAT---TCTAG-CTATT-CT-TG-T-CAA-G-CA-AAATAA--AG--A-TATTAAA--GGT-ATAA---TG---A------TGAATGA-T----------GA----AGAGCA-CAA-AATCTC-CCA---ATATGCAGA-CG-AC-ACAT---TT----T-TGGCTCTAGGTGGTTCCCAAAAATCTCT--TTTTGC----TGCTCCT-GA-TA-CAAT--AAA-TTATTACTT-TA---T--TTTTTCTGGATTACAAA-TA--AA---TAGCTC--AAAAAC-AAA-AATAGT-TT-GGACAGGCT--CTAAAACAT---TTCCTAAA-G-AAGT-ATATCA-CCA-TA--CAA--GAT-GGAA--
gi|9 : AA-ATTGAA-GATAT-----AAATTTTA-----GGA--ACT-CAAATT--CCTTAA-AATTGTT---TCTC-TCATTGAACGA-GTG-GAAGAGAA-GAA----ATTCTAT-T--A-TCCTTACTCTGGTCGG-GTACACTG-TGA-TTAAAA----CACTTGCTTAT-T--CCA-AAATTAAATC-ATTGTGT-TCATAAT--C-TCTTGC-TACT-----CCTT-ATA-AAAGTAC----------A-TATc
blockSeqs : A GG A G ATT G AC A A C ACT GT TAT G T . G C T . . GCATTA C . GGGG T C . GTACAGT AC T ACATGA T A CA A GTAGCC A ACTA G G A GT TTT AAGCTATTTATTAA C AG AG A ATT TACA TC G A TTG AAGAT A G CT C A G A A A G A TT T ACA CTG AC T CCA T TT A TCTTTTAC G G A C A CT T . T TC AC T CC A A C A A C G T G GGA A A CTGAAT ATCT T G GTAA C A C T C TGATGTTTTT G G TGCGG CAAATT A TCT T TTTTG C T GA C A A T A A C A TA C ACAT TAAG GTT CTAC A . CA ATACGATAATTTTATAA T A G G C G G TTC TCTCA GAA A A T G TTAA T A CC AT C . CAT G G C ACAAAAGAGGGGGTG A C C G T T TAGCGA TTATTC ATATTTATGCT GCTTA GTA T CCAATAGTTAA G G . C . GT C ATT G ATGTTCAGTGTAT A C TTTTTCTTTTAAAC A G C G TAT T T A C TTCC CCCAC T A CT A GG GTTA A T C T TA CA T AA CAGT T AA A . CTG T CT TT T G C T A T TG T AAAA AA CC CT T T TAC CC A AT C AG TGATC GAA . C GC A GC AGG GT A GAGG A AGTAGAGAATA T GGTT AA TTTCT ACAAAT GG T A CG TT G AAG TA TAAA GA C T A ATTCTATTATCCTTACTCT TG GC C A . TT GA TG ATTTG . G C G G G AATCTCTTGC T . TA A T T GACAATTTCA C TCATCATTAAG G A . CGA TACTA A AG T GT CA . AAAC CA C TAATAAC C . CA T GT T TTG T CC TAATTAT GACTG TC T T AG A CAGATTG T A G . GTG AAATCCA G TG T TT G TA TGC . AGTG G T A AAT AAT . C CT . TT T . G AA C GA A T T A . AAAATATG ATTA T CAG G A . . A T C T GT T TG C . G A T G A C A G .
blockSeqs : G G . A A A . C . . A . . TAATT . . TG . . TT T AGT . CA . . C TT . . T AA . T . TGT T C . AT TGTAA . . A T . . A T . A A T T . TT TT . G . T A CTT . A G . . . A . T . C T GC T . . A A . . A . GTC C . TCGA TAAT A . AA T A T . A GTATGC G T T ATT . AC . TAATT . T . . T . G A . . T TT . A . A . T . . TCATACTGTTTACG T A . G . . . TT TTC G G . . . . T T . A . . . . A T GTTGAACGTCGGTGG A . . G . . CAG TC TTCTCCTTTG C A G CTATTTCTTG . . . . . . . G . CTTGTTGCA A T AAACACTG . . T . AT A . . . AT ATC T A CA A A . C . . G T T A C AAG T TA . . . C . A . T . . C A T A T AG TG CA . . T . . . C G GATG A . . TC . G TGG . . A C AATTAGACA . TGAA TT T TTT . . A . G . . A ACAA A . G . TTCAATTACTCCTATT C AC . G . CA GA G GTCC . A . . T . ATCTGTCG A . T G . . TA . CATCATTAAG A T . A G . TG C AG CA . AA AC T TTACT . . TT G T . GTT . . GTAT GA . T C AC A GATC . . G . . ATCC G C T CT A TT TA . G . . . A AT . . A . T G . . . C A . . . A . AAAAGAT A . AA G A . . C T . . AA . G . . . . . G . T . A .
blockSeqs : . TTAGC . . TG . . AA A AGT . GT . . A GT . . G TG . A . G A A . T TCAGT . . T T . . T A . G T C C . TG CC . A . T A T . A A . . . A . A . T T TT A . . T T . . T . GGG T . GAA AT A . AA T A G . A CGTGCT G G A ATT . TC . GATA . T . . A . G A . . T TC . T . C . T . . AACTTTATTCCA . T . G . . . TA TTC . G . . . . T A . A . . . . A C TGAACGTGGTTG A . . G . . A TT TTCTTCTTTG A . T CTCTCTCTGA . . . . . . . A . TGTAATTT A T TAAA . . T . . T . . . C TC A T CA T . . . . . T T G T T AA . CC . . . G . A . T . . T T . A A TG G T . . T . . . T . ATG A . . AC . T AA . . G G CTTACAAG . AGTT TT . TTA . . G . T . . C ACAA A . T . GATCTAACACCAATA G A . T . TA GA A TTA . T . . T . TCTCCTC A . A A . . A . ATGCC A G . A T . TG T AC A . C AC T TTA . . CC G . . T . . . T . . A C . GG . . . . . TA G C . T A T . . C . . . A . . . T . T . . . . . . . . . A . AAT . . G . A . . A . . .
blockSeqs : G . . T G AGT . CA . . C . . . G TA . T . T C C . T CCAA . . C A . . . . . A T C A . AT C . T . A A G . A A . . . T . T . A A CT G . . A T . . G . GGC A . GAA GC G . AA A A T . A AATGC G T C ATT . TT . CATT . T . . C . G A . . T TT . T . A . T . . ATACATTATTG . A . G . . . TA CAT . T . . . . T C . A . . . . G C ACAAAGAGGGTG A . . G . . A TT TTCTGCTTTG C . T CTCTCTTGA . . . . . . . G . ATGTA T C TAAA . . A . . A . . . A TC G T CT T . . . . . T T T A A C . AA . . . C . T . A . . A C . T T GG C T . . A . . . G . ATG A . . T . C AC . . T C AGAGAATA . GCAA TT . AT . . G . A . . A TGAA A . A . ATCGTACTCCTTTA G C . T . T . A ATC . C . . T . GCACT A . T A . . . . TCTCT . G . . C . A G . T . C G T . . . T G . . . . . . T
blockSeqs : G . . T G AA . CA . . . . A . C T A . TA T . A . A A T . . A . . . T . A . T T TC G . . A G . . A . TG C . AA AT T . AT A . T . T TATGT G T T ATT . GA . TCAT . T . . . . A C . . T TT . T . C . A . . CAAAAATATTC . G . G . . . CT ATC . A . . . . T A . A . . . . A C ACCAGAGGGTTG A . . G . . T AT CTCATATG A . T CAATATTAA . . . . . . . A . ATGTA G C TGCG . . C . . T . . . T AG C A TT C . . . . . A T T . T A . AA . . . T . A . T . . T A . A T GG G A . . T . . . G . ATG T . . C . A AT . . T A ACATTAAC . TACG AC . AC . . G . A . . G ACA A . A . AACTCACTCTCATT G A . T . T . A ATT . T . . G . TTCTC . . T T . . . . G . .
blockSeqs : T . . . C . A . . T T . . G . . . A . A . T . AC A . . . A . . . AA AC A . AA T . G . C TATGT G T C AT . AT . CATA . C . . . . T T . . A TT . T . C . T . . ATATTTCATTC . A . A . . . CA AAT . T . . . . C A . A . . . . A T ACAAATGGTATG A . . T . . G TT ATCCTATG C . G CAATTCTCA . . . . . . . A . TGTGA T T CACA . . C . . T . . . T T T A CT C . . . . . A A A . T T . AC . . . T . T . T . . T A . A T AG G A . . T . . . T . CT G . . T . A TC . . G A AGAA . TATG TA . AT . . G . A . . C G . . G . TTCTAACACCAATA . A . G . . . . . . A .
blockSeqs : . . A . . . T . . C T . . . . AA AC . . . T . C AGA . . T A . TC . CAT . T . . . . A T . . G TC . G . T . A . . TAATATAATTA . T . A . . . CA TC . G . . . . T G . A . . . . G A ACAGAGAGGTTG A . . C . . A TT TATG A . A CTCTCTTGA . . . . . . . A . ATGTA T . TGAA . . A . . A . . . A T A T AA T . . . . . . . A . C . . . G . G . G . . T T . A . TA C T . . A . . . C . GG G . . C . T T . . T T . TGAA C . AT . . A . A .
blockSeqs : . . . . AT . CA . T . . . . . . . . T TT . T . C . A . . AACTTTATTC . T . T . . . TA TC . C . . . . T A . T . . . . G T TGATGTCGT . . . . . . A C AATG C . G CTATTCTTG . . . . . . . A . TGTGA G . TAA . . A . . A . . . T T G T T . . . . A . A . . A C . T . T G A . . A . . . T . A T . . T .
blockSeqs : T . T . C . . . . . . . . C GA . T . A . G . . TTATATGTTA . A . A . . . A TT . T . . . . C T . . . . . . . G AA . . . . . . A . TTCA T . A . . . . . . . . . . AATGA G . . . T T
blockSeqs : . . G TC . T . G . T . . . . T . . . . . . . . . . . . . TCCT A . . . . . . . .
blockSeqs : A . T . A . . . . . .
blockSeqCons : AGT*** CA** GT NG T** T* A** N* N* ** T** GGN* AC**** AA** ATT**** NC** CATT***** TT* T**** ATACNTTATTN*********** CA*** NTC***** ** ACAAAGGGGTTG******* A******* CTCTCTTGA**** ** ANNNA************ TAAA*************** ** ATG** N** T* N*** A* NNAA A** A* GA** ATC*** ATCTCTTC****** ** T* CGTCT****** **** A*** TG AC** AC* TTA***** **** T*
originalCons : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTT-AAC-AAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAATT-CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AA-T--ACACTT--T-------TAAATG-TACTTATACAA-ACT-TATATC--GGG-NTGTC--TNAGCTAC--AGAAT-T-AAATCTACTTCTNGA-TTAT-TTAATATCGG-ATA-CTCAANC-TG-G-TTTNTG-AAGG--G-A--GAT--AC--ATAGG-AGAA--AATACNAGATTTATNT-ATGATCTCGATG----TCTTACACTGAAATGGACT----AAT---AT-TC-CAGGN-T-TA-CTAGTACT-C-A--T--GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-T-CNTTTATTCTATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGGG-G--A--ATACTAT-AATT-----A--AAT-GGATNA-AGATT-T-TAA-A-TA--CAAAT--T-C---AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTA-TCAG-AA--CA---GTT-CGACATAC--AAGAGA-G-GTTG-GCAGACAA-GG-GGGACCCTG-TTG-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-CTACT-CT-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-ATA----TGT--A------TGAACGA-T----------AA----GGAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-T---TC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GA-TA-CNATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACTANAAA-TA--AA---TANCTC--AAAAAC-AAA-AATNGT-TT-GGATNGGNT--CNAAAAAAT---TTTCNGAA-G-AAGT-NTTTCA-CCA-TN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACTG--ACT-T-TCAATCTTAT-TAGGN-AT-A-NAAT--TT-TC---GGTNG--A-TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATACAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTACACAG-TTG-TTAAAAG--ACACT-GCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--T--C-NCT--C-TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTT--ATCNCTAAGTGAANAGTTT----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC-AACAAGAACAAACTGT--TACT-CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAA----G-TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
finalCons : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTT-AAC-AAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGAAGT---GATGG-TTTCACA--GTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N--AAAG-CGNT-TAAT--CATATTTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCCA--A-TN-ACACTT--T-------TAAATG-TACTTATACAA-ACT-TATATC--GGGN-TGTC--TNAGCTAC--AGAATT--AAATCTACTTCTNGA-TTAT-TTAATATCGG-ATA-CTCAANC-TGGN-TTTNTG-AAGG--G-A--GATAC----ATAGG-AGAAAA--TACNAGATTTATNT-ATGATCTCGATG----TCTTACACTGAAATGGACT----AATATT----C-CAGGNC--TA-CTAGTACTCATT-----GATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-T-CNTTTATT-TATAAA-GTT----TTA----AA--CTAT----TTTGGNTTTGGG-G--AATACNTTATTN-----------AAT-GGATNA-AGATT-T-TAA-ACA---CAAATNTC-----AGAG---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTA-TCAG-AA--CA---GTT-CGACATACAAAGGGGTTG-------CAGACAA-GG-GGGACCCTG-TTG-CA-------CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNGCTCTCTTGA----T-CAA-A-CA-AAACAA--AG--A-TATAAAA--GGT-ATANNNA------------TGAACGATAAA---------------GAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-T---TC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GA-TA-CNATT-GAN-TTTTTACTC-TA---N--TTTT-CTGGACTANAAA-TA--AA---TANCTC--AAAAAC-AAA-AATNGT-TT-GGATNGGNT--CNAAAAAAT---TTTCNGAA-G-AAGT-NTTTCA-CCA-TN--CAA--GAT-GGAA--GCTGGANT--GGGATG--CACTN--ACT-T-TCAAT-TTAT-TAGGN-AT-A-NAAT--TT-TCN---GTNG--A-TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATNNAACA--GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GTA-ACAG-TTG-TTAAAAGA--CACT-GCTTATC---CCA-AAACTNAATC-ACC-TNT-TTATATCTCTTC------TACCAAA--CCCT-AAA-AAAG-AG----------A-TATTTCGTCT------TGAANAGTTT----TTTTA---ATTCATN----TGG-ATGTCNAANATCAGATA-AAGTCAC--AAGAAC-AACTGTTA-----CCAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAA----G-TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATGT-TTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): GCTTACTAATCAGAATGTCATAAATCTTGGGATTAATATTTTTTTTGCTGTGTATGGAAATGATATTCTTATGAAGTTATTATGATTTTGGAGATAGTTTTTATGATCAGAAGATGTTTCTTAAGGAAAAAA
Unaligned ( gi|28 ): TCCCTACTTCCAAACGGGATACAATTTCATACTTATAAATTCAAAATTTTATTTCGATTCTTACGGAAATCTAATAGTTTATGGTAACACAAGACTATCTATC
Unaligned ( gi|29 ): CTTGAGCAGAAAGAAATGAAAAGTGGTCTATTTCATGCCATGCTTTGGATG
Alignments
lowQualScore : 1 22 1 222 11 1 22 222 11 222 1 1 222 222222 222 2222 1 1111111 22 1 2222222 11 1111 1 11 111 44444444444444 11 11 111 33333333 111 111 11 1 1111111111 1 111 2222222 111111 11 22222222222 11111 11111111 333333333333333333333333333333 1111 11111111 1 11111111 1111111 444444444444444444 11111 1111 333333333333333333333 111111111111111 22222222222222222222 111 222222 11 1111 1 11 1 333333 1 11 1111 111 11 11111 111 1111 1111 22222222222 11111 111111 22222222 11 111 222 444444444444444444444444444 111 11111111 222222 4444444444 11 777777777777777777777777777777777777777 2222222222 222 11111 11 222 2222222 2222222 11 11111 33333 11 3333333333 3333 11 1 2222222 1 1 1 111 2222222 11 11 111 1 111 222 3333 1 1111 222 1 1 11 1 1 1 11 222 1 1 1 1 11111111 2222 1 2222 1 1 1 1 1 111 1 11 1 1 1 1 1 1 2 1
lowQualScore : 2 00 3 1 555 1 88 1 3 55 555 88 222 1 1 5 1 1 1 5 111 999999 1 111 2222 1 6 0 0 2222222 33 0 0 2222222 6 6 22 2 999999 6 2222 6 3 1 00 444 77777777777777 8 00 11 1 444 22222222 8 22 8 8 222 6 6 6 77 1 8 8 777 1 8 3 1 88 6 000 000 99 5 0 66 5 0 3 7777777777 5 3 3 3 5 5 77 66 77 1 77 000 1 11 2 5 5 1 4 5 5 1 55 99 1 5 0000000 000000 00 0 7777 1 5 1 5 1 55555555555 0 2 7 0 22222 999999 4 77777 44 4 444 3 4 2 4 1 55 4 55555555 3 1 3 3 3 66666 7777 666 77777 1 6666 666666666666666666666666666666 3 1 3 1 3 7 3 3333 0 55 4 4 777 1 4 4 4 8888 1 1 55 1 4 4 55 777 4 1 1 6666 22222222 4 1 4 1 3 8888 777 77777777 0000000 999999999999999999 00000 2222 2 111111111111111111111 3 3 3 3 55 55 4 555 666 4 777 666666666666666 2 8 22222222222222222222 4 4 1 4 333 1 4 4 4 4 999999 1 1 11 1 11 0000 0 5 00 55 66 2 0 000000 0 0 0 44 5 66 777 9 66 55 4 1 4 4 1 1 00 1 2222 11 777 999 4 111 66 4 66 1 00 44444 111 4 4 666 4 66 3333 0 77 4444 1 5 99999999999 5 22222 777777 11111111 66 5 2 66 00 5 000 66 000 5 5 5 1 5 555555555555555555555555555 5 222 5 1 5 77777777 5 0 000000 5 1 5 6 1 6 1111111111 3 99 00 1 6 6 777777777777777777777777777777777777777 1 6666666666 000 55555 6 99 1 77 77 8 111 6666666 3 6666666 8 8 44 2 55 6 55555 66666 33 3333333333 1111 33 0 1 88 3 3333333 0 0 0 0 2 0 777 4444444 2 00 33 111 0 111 0 444 0 8 0 3333 0 8 8 0 4444 777 0 0 44 0 88 0 9 0 0 33 2 666 0 0 0 3 0 33333333 5555 0 1111 2 3 0 0 1 5 0 0 000 3 44 3 3 6 3 3 6 3 2 6 1 3
lowQualScore : . .. . . ... . .. . . .. ... .. ... . . . . . . . ... ...... . ... .... . . . . ....... .. . . ....... . . .. . ...... . .... . . . .. ... .............. . .. .. . ... ........ . .. . . ... . . . .. . . . ... . . . . .. . ... ... .. . . .. . . . .......... . . . . . . .. .. .. . .. ... . .. . . . . . . . . .. .. . . ....... ...... .. . .... . . . . . ........... . . . . ..... ...... . ..... .. . ... . . . . . .. . ........ . . . . . ..... .... ... ..... . .... .............................. . . . . . . . .... . .. . . ... . . . . .... . . .. . . . .. ... . . . .... ........ . . . . . .... ... ........ ....... .................. ..... .... . ..................... . . . . .. .. . ... ... . ... ............... . . .................... . . . . ... . . . . . ...... . . .. . .. .... . . .. .. .. . . ...... . . . .. . .. ... . .. .. . . . . . . .. . .... .. ... ... . ... .. . .. . .. ..... ... . . ... . .. .... . .. .... . . ........... . ..... ...... ........ .. . . .. .. . ... .. ... . . . . . ........................... . ... . . . ........ . . ...... . . . . . . .......... . .. .. . . . ....................................... . .......... ... ..... . .. . .. .. . ... ....... . ....... . . .. . .. . ..... ..... .. .......... .... .. . . .. . ....... . . . . . . ... ....... . .. .. ... . ... . ... . . . .... . . . . .... ... . . .. . .. . . . . .. . ... . . . . . ........ .... . .... . . . . . . . . ... . .. . . . . . . . . . . .
lowQualScore : 0 00 3 0 777 0 33 0 3 33 777 00 000 0 0 5 0 0 0 5 000 555555 0 000 5555 0 7 0 8 5555555 88 0 8 7777777 7 7 00 2 555555 7 2222 7 3 0 66 000 00000000000000 8 22 00 4 000 00000000 0 44 0 0 888 7 7 7 77 0 0 0 222 4 0 7 0 00 6 000 444 66 0 5 99 0 8 6 1111111111 0 1 2 9 7 7 99 77 99 0 99 444 7 22 8 0 7 7 0 7 7 0 88 22 0 0 9999999 888888 55 2 4444 0 0 0 0 4 00000000000 8 5 2 9 11111 444444 4 55555 33 0 222 7 0 4 0 2 55 0 77777777 6 0 6 6 6 55555 1111 999 66666 0 1111 333333333333333333333333333333 3 0 3 6 6 3 6 8888 7 00 0 0 000 0 0 0 0 5555 2 0 55 1 0 0 55 000 0 4 4 1111 77777777 0 0 0 0 6 4444 000 44444444 2222222 555555555555555555 55555 6666 3 999999999999999999999 3 3 3 3 00 55 0 999 222 0 000 777777777777777 3 2 44444444444444444444 4 4 0 4 999 0 0 0 0 0 444444 0 0 11 2 99 6666 0 0 99 44 00 4 6 333333 0 8 8 44 0 11 888 7 11 88 4 0 4 4 0 0 66 0 7777 99 222 999 4 666 11 4 11 0 66 44444 444 4 4 666 4 00 2222 4 22 6666 0 0 44444444444 0 11111 999999 00000000 99 0 2 99 55 0 000 77 000 7 7 7 0 7 111111111111111111111111111 7 777 7 6 7 00000000 7 4 666666 7 0 7 7 0 7 3333333333 5 22 22 8 7 7 333333333333333333333333333333333333333 0 2222222222 888 22222 7 22 0 66 00 0 666 0000000 8 8888888 0 0 66 5 88 7 88888 88888 88 0000000000 2222 88 5 0 00 2 0000000 8 2 0 0 5 0 555 8888888 5 22 22 000 5 000 2 000 8 0 8 0000 8 0 0 0 8888 000 0 0 22 0 88 8 2 0 0 88 5 555 0 0 0 2 0 88888888 5555 0 8888 5 2 0 0 0 5 0 0 000 3 00 3 3 7 3 3 7 3 0 7 0 3
consensus : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTT-AAC-AAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N----AAAG-CGNTTAA-TCGTAT-TTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AA-TTACACTT--T-------TAAAT-GTACTTATACAA-ACT-TATAT--CGGG-NTGTC--TNAGCTA--CAGAAT-T-AAATCTACTTCTNG-ATTATTT-AATATCGG-ATA-CTCAANCTGGNT--TTNTG-AAGG--G-A--GAT--AC--ATA-GGAGAA--AATACNAGATTTATNT-ATGATCTCGATG-T----CTTACACTGAAATGGACT----AAT---AT-TC-CAGGNC-TNCT-AGTAC-TC-A-TTG-ATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-TCNTTT-ATT-TATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGG--G-GA--A--TAC------T--TT--ATT--NAA-TGGA-TNA-AGATT-T-TAA-ATA--CAAATT-TCAG-A-G---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTAT-CAG-AA--CA---GTT-CGACATA--C-AA---AGG--G-GTT-GCAGACAAGGG-GG-ACCCTGTT-G-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-C---T--CTC-----T-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--G--GT-A---TANTN----A------TGAACGA-T---------AAA------GAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-TTC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GAT-ACN-ATT-GAN-TTTTTACTCTA---NA-TTTT-CTGGACTANAAA-TA--AA---TANCTC--AAAAACA-AA-AATNG-TTT-GGATNGGNT--CNAAAAAAT---TTTCNGAA-G-AAGT-N-TTTCA-CCATN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACT--AACT-TTC-AA-C-TTAT-TAGGN-AT-A-NAATTT-TCT---GTNG-A--TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATNCAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GT-A-ACAG-TTG-TTAAAAG--ACAC-TGCTTAT-N--CCA-AAACTNAATC-ACC-TNT-TTAT--TCTC-CT-CTACCAAA--CCCT-AAA-AAAG-AG--A-TA-T--------TTCA-TC-TT---TA---A----ANAGTT-----T----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC--ACAAGA-------ACAACTGTTACT--CAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAAGA---TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
Reference ( family-2981 ) : NNNNNNAGATGGGTGGAGGAGAGGGAG-AAACCTACTAAATATTTCTGT-GNTCTAGAA--TCTAGNA--ATTNTTT-AAC-AAATAA--TCAAAAAAGGGTTAAAACTATCGAGAAGNCGANGTATTNATANCCANTCGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAGGCATTATCCANAATTCTCTGGAGGGGTGAAGTNATCTG-AAAGTGAAATTTT-TACAGCGT--TG-AAGAATA-G-----AAA-AATAACAAA-TCTACCGGGA--AGT-GATGG-TTTCA--CAGTTG-AATTT-TTNAAGTTTTTTT---GGAAGG--------------ANATCNGAA--GAATTA---TGT---N----AAAG-CGNTTAA-TCATAT-TTTTNAGA-AAAG-GAGCTT-CCN-ATNTCACAAAGACT-GGA-ATTAATCACT-TGTTTGCCNAAAGGTGAT-AAACCNAGAC---AATTTT-TGAAAAACTT-GGCGTCC--AA-TNACACTT--T-------TAAAT-GTACTTATACAA-ACT-TATAT--CGGG-NTGTC--TNAGCTA--CAGAAT-T-AAATCTACTTCTNG-ATTATTT-AATATCGG-ATA-CTCAANCTGGNT--TTNTG-AAGG--G-A--GAT--AC--ATA-GGAGAA--AATACNAGATTTATNT-ATGATCTCGATG-T----CTTACACTGAAATGGACT----AAT---AT-TC-CAGGNC-TACT-AGTAC-TC-A-TTG-ATT-TTGAGAAGGCTTTCGA--CT-C-A-TGTCATGG-TCNTTT-ATT-TATAAA-GT---T-TTA----AA--CTAT----TTTGGNTTTGG--G-GA--A--TAC------N--TT--ATT--NAA-TGGA-TNA-AGATT-T-TAA-ACA--CAAATN-TCAG-A-G---CTTCNGT-TTTACA-A-A----GCGGNTTT--TTAT-CAG-AA--CA---GTT-CGACATA--C-AA---AGG--G-GTT-GCAGACAAGGG-GG-ACCCTGTT-G-C-----A--CCATATTT----ATTT-------TNC-T------TGC-C---GAAAT---TCTNG-C---T--CTC-----T-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--G--GT-A---TANNN----A------TGAACGA-T---------AAA------GAACA-TAA-ANTATC-TCA---GTATGCNGA-CG-AC-AC-TTC----T-TNGCTCTTGATGGTNCCCCNAAGTCTCT--TTTCGC----TGCCCTT-GAT-ACN-ATT-GAN-TTTTTACTCTA---N--TTTT-CTGGACTANAAA-TA--AA---TANCTC--AAAAACA-AA-AATNG-TTT-GGATNGGNT--CNAAAAAAT---TTTCNGAA-G-AAGT-N-TTTCA-CCATN--CAA--GAT-GGAA--GCTGGANT--GGG--ATGCACT--NACT-TTC-AA-T-TTAT-TAGGN-AT-A-NAATTT-TCN---GTNG-A--TT--AGAACAAA-ATTGCG-GATTT-----AAATT--AC----GGA--ATT-CAGATA--CCA-AA-AATTAAA---GCTN-TGATNNAAC-A-GTG-GAGNAGAA-GAA----A----AC-C--ACTCCTCATTA-GGTCGG-GT-A-ACAG-TTG-TTAAAAG--ACAC-TGCTTAT-C--CCA-AAACTNAATC-ACC-TNT-TTAT-ATCTC-TT-CTACCAAA--CCCT-AAA-AAAG-AG--A-TA-T--------TTCG-TC-T----TG---A----ANAGTT-----T----TTTT---AATTCATN----TGG-ATGTCNAANATCAGATA-AAGTC--ACAAGA-------ACAACTGTTAC---CAA-G-ACCTATTTGAAAAGTGG--CTTA-AAAATG--T--GAGTG----TAAA--AACTTT---TAT---ATCTTTAAAG----TAC--ATGCGATNAAAANGTTAACAAACT--GATCGTTACAAAC-CATGG-TTAGATA-TTTT---CTTTGAAATCCATGGCAAC-AAT-GTGG-T-ACGAAA-T-TGTTG-GATTTTGGTGATGA-ATAT----TTAA-AATGG-T-TATG-A--TCACAGTA--GAG-TTTTGG-CAC-G-ATG-TTTTCCAGTCATTGG-TTGTC-TATGGTG--AAACAA-G-TGGA-TA-ATAA-TCATTC-AGTTCAAAATAT-TTATCGTTCT-GTCCC--G-TATGGTATAATA-CA-AATNTCTGT-GTT-GGAAATAAAAGTATTTATG-TTAAAACATGGCATGCT-CAT-GGTGTG-AAAATAA-TTGGCG-ACTTCTTTAG-ATGANGA-TGGAAA
gi|1 : AAATGGGTGGAAGA-AGGGA--AAACCTAGTAAATATTTCTGT-GCTTTAGA---TCTCGTA--ATTTTTT-AATTAAATA---TCAAAAAAGG--TAAAAC-A-CAAGAAGTCGAGGTATTTATAACCAGTTGGATCATCTTCTATCCATGTCAAGGTCTTCTAATGAAACACTTTACTCCTGTAAAGATTCAGATCTTCGTGAGTAATAAATGTAGAAGATATTTCATTATAAAACCCCAGTACATACCAAAGTTATAGGACAG------TTCAAAATTCTCTGGA----TAAAGTAATCTGAAAAGTGAAATTTT-TACAA-GTC-TG-AAAAA-A-G-----AAA-AATTACAAA-TCCACCAGGA--A-T-GATGG-ATTCA--T-GTTG-AGTTTCTTTAAG-TTTTTT---GGAAGG--------------A-ATC--AA--GAAATA---TGT---A----GAAG-TGTTTAATTCAAAT-TTTTAAGA-AAAG-GAGCTT-CCA-ATATCACAAAGACT-GGA-TTTAATCACT-TGTTTGCCAAAAGGTGA--AAACCTAGAC---AATTTC-TGAAAAATTT-GGCGTCC--AT-T--CTCTT--T-------TAAAT-GTGCTT-TGAAA-ACT-TATAT--CGGGCCTGTCTTTTA-CTA--CAGAAT-TAAAATCTACTTCTTG-ATTATTT-GATATCGG-ATT-GTCAATCTG--T--TTATA-AAGG--G-T--AAT---C--ATA-GTAGAT--A--ACAAGATTTGTGT-ATGATCTCAATG------CTTTCACT-AATTGGACT----AAT---ACATC-CAGGATACACT-TGTGC-TCTA-TAG-ATT-TTGAAAAAGCTTTCGA--CT-C-A-TATC-TGG-AAGTTT-ATTCTATAAA-GT---TCTTA----AA--C-------CTTGTATTTGG--GCGA--A--TAT------T--ATAAATT--ACA-TGGG-TTA-AAATT-TCTAA-ATATTCAAACA-T-AA-A-G---CATCTGT-ATTACA-A-A----GCGGTTCC--TTTC-CAG-AAAGCA---AAT-TGATATA--C-AAG--AGA--GCGTTGGCAGAC-AGGA-GA-ACCCTATC-G-C-----AATCCATA-TT----ATTT-------TCC-T------TGT-C---GAAAT---TCTAGTC---TA-TTC-----T-TG-T-CAA-AGCA-AAATAATGAG--A-TATTATG--G-----A---TAATG----A------TGAATGAGG---------AAG------GAGCA-CAA-AATCTC-CCA---ATAT-CAGA-CG-AC-AC-TTT----T-TGGCTCTGGATGGTTCCCCAAAATCTCT--TTTTGC----TGCTCTT-GA--ACA-AGT-AAA-TTATCACTCTA---C--TTTT-CTGGATTACAAA-TAGGAA---TA-CTC--AAAAACA-AA-AATAG-TTT-GGATAGGCT--CTAAAAAAT---TTTCTAAA-G-GAGT-A--TACA-CCATA--CAA--AGC--AAA--GCTAGAGT--GGG--AT-TACT---ACTATCC-AA-TCTTAT-TAGGC-AT-A-GAATTT-TC----GTGG-A--TA--TGAA-AAA-ATAGTG-GATTA-----AAAAT--AC----AAT--ATT-CA-ATA--CC--AA-AATTAAA---GCTT-TGATAC-AC-ATCTG-GAATAGAA-GAA----A----AC-C--ACTCCTCATT---GTCGA-GTCC-ACAG-TTGCTCAAAAGACACAC-TGCTT-T-A--CCGTAAGCTTAATC-ATT-TGT-TTAT--TGGCACT-ATACCAAAATTCC------AGAG-AG--A-TA-C--------TT-G-TC-TCTC-TG---A----ATAGTT-----TGTTCTTTTTCGAATTTATA----TGG-AT-TCAAAGATT-GACATAGGTT--ATAAAG-------ACAAACGTTACTGGCAA-GAACCGACTT--AAAGTGG--CTTA-AAAATG--T--GAGTGTTGATAAA--ACTTTT---TATAGCATCTTTAAAG----TAC--ATGCGATAAAAGGGTTAACAAACT--G-TCATTCAAAAC-CATGG-TTAGATATTTTT---CTTTGAAAT-AAT-GCATA-AATGGTGG-T-AC-AAA-T-TGTT--GATTTTGGTGATGATATAT----TT-A-AATGG-T-TATGAA--TCACAGTA--AAGATTTTGG-CAT-GAATG--TTTCCAGTCATTGGTTTGTC-TCCTTTA--AAACAATG-TGGA-TA-AAAA-TC--TCAAGTTC--AAT-T-TTATCGTTCT-GTCCC--A-TATGGT-TAATATCATAATCTC-GT-GTT-GGAAATAAGAGTATTTATG-TTAAAAAATGGCAT-CT-CATGGGTGTG-AAAATAA-TT-GCG-ACTT-TTTAGTATGATGATTGGAAA
gi|10 : cgggctGGTGATTAAACCTAAAC---AATTTT-TTAAAAAACT-GGTGACC--GA-TTACATTG--T-------TAAAT-GT-CTTATATAA-ACT-TATTT--CAGG-TTGTC--TTAGTAA--AAGAAT-C-AAATCTACTT-TAG-GTCATCTCAAT-TCAG-ACA-CCCAGTCTGGAT--TCATG-AAGG--GAA--GAT--AT--ATT-GGTAAA--AATACCAGATTTATCT-ATGATCT-AATG-C----ATTATACAGAAA-GTAAT----AAT---AT-TC-CAGGAC-TATT-GGTAT-TG-A-TAG-ACT-TTGAAAAGGCTTTTGA--TTCC-A-TTTCATGG-TCATTT-ATA-TATAAA-GT---A-TTG----AA--ATAT----TTTGGATTTGG--T-GA--A--TAC------A--TT--ATT--GAA-TGGG-TAA-AGATTCT-TAA-
gi|11 : gttacacaacaacttaaatactcTCTG-AAAGTGAAATGTTGTACAGTCT--TGTAAGGATA-G-----GATTAATAACAAA-TACACCAGGA--AGT-GATAGATTTCAACTATTTGGAATTTGTTAAAGTTTTTTTTTTG--AGG--------------ACATCAGAA--GAATTAATTTGT---G----AACG-TGGTTAA-TCACAT-TTT-AAGATAAAGAGAGCTT-CCA-ATCTCACAAAGACG-GGG-AT--ATCACT-TGTTT-CCAAAAGGTGAT-GAACCTCGAT---AATTTTCTGAAACATTTTGGCGTCC--AA-TTAT-CTTCTT-------TAAAT-GTGCTTGTACAA-ACTATATAG--CGG--ATGTC--TTAGCTA--CAGAATAC-AAATCTACTCCTTA-TCTATT
gi|12 : TG-AAGG--G-AA-GAT--ATCTATA-GGGGAA----TACTCGATTTATTTTATGAGATT-ATG-T----CATACACTGAAAGAAACA----GAT---AT-TC-CAGGTC-TTCTTAGTAC-TC-A-T-G-ATT-TTGAGAAGGCCTTTGA--CT-C-AATGTCATGG-TCTTTC-ATT--ATAAA-GT---T-TTA----AA--CTAT----TTTGGTTTTGG--G-AA--A---AC------T--TT--ATT--CAA-TGGA-TAA-AGATT-T-TAA-ATT--C-AATT-TCAG-A-G---CTTCAAT-TTTAC--A-A----GTGGATTT--TTAT-CAG-AA--CA---GTT-CGACATAACC-AA---AGG--G-GT------------------CCCTATT-A-C-----A--CCATATTTATTCATTT-------TAT-G------TAC-C---GAAAT---TCTTG-----------------------------------CAA--AG--A-TATAAAG--G--GT-A---TATGT----A------TAAgatacgat
gi|13 : TTT-CAGGTCTAAGGA-TA--AA---TTTTTC--AAAGACA-AA-AATGG-TGT-GGATAGGTA--GTAAAACAT---TTTCAAAG-G-AGGT-T-TTCCA-TCATT--CAA--GGT-GGAA--ATTTGACT--GGA--A--CAATGAAACA-TTG-GA-T-TTAC-TAGGG-AT-A-AGATTCAACA---GTAA-C--TT--ACAA-GAA-ATGGTT-GAAAT-----GAATT--AT----AAG--ACT-AAATTA--AAG-GA-AATTAAAAAGGTTA-TGATG---C-A-GTG-GAATAGTA-GAA----A----TCGT--ACTCCT--TTA-GGAAGG-CT-A-ACAG-TAA-T--AAAG--ACA-------------CCA-AAATTGAATC-AC
gi|14 : agttctccaacttctatggatgacattattagagtcctagattacttggcaataa---T-CTA----AA--ATAT----TTTGGTTTCGG--G-GATTA--TAT------G--TT--A----GAT-TGGA-TTA-AGATT-C-TAA-ATA--CATATT-TCAA-A-G---CTTCGGT-TCTACA-A-G----GTGGTTTC--CTAT-CTG-AA--CA---GTT-CAATATT--G-AA---CGT--G-GTT-GCAGACAA-GG-GG-ATACTGTT-G-C-----A--CCATA--T----ATTT-------TTC-TCCTTTGTGT-A---GAAAT---CCTGG-C---T--CTC-----T-TGAT-CAA-A-CA-AAACAA--AT--A-TATAAAA--G--GT-ATTGTAATT----T------TAAACGA-T---------AAA------GAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AT-AC-CTC----TCTTGCTCTTGATGGTACTCCTAAGTCATT--ATTCGC----TGCCCTT-GAT-ACT-ATT-GAT-TTTT
gi|15 : TTTATGT-ATGACATT-ATG-T----CATACACTGAAATAAAC-----AAT---AT-TC-CAGGTC-TTCT-AGTAC-TC-A-TTG-ATT-TTGAGAAGGCCTTTGA--CT-CAA-TGTCATGG-TCTTTC-ATC-TATAAA-GT---T-TTA----AA--CTAT----TTTGGTTTTGG--G-AA--C--AAA------A--AT--ATT--CAA-TGGA-TAA-GGATT-T-TAA-ATT--CCAATT-TCAG-A-G---CTCCGAT-TTTACA-A-A----ATGGATTT--TTAT-CTG-AA--CA---GTC-CAACATA--C-AA---AGA--G-GGT-GTAGAC-AGGG-GG-ACCATGTT---------------TATTC----ATAT-------AAT-G------TGC-C---GAGAT---TCTTG-C---A--ATA-----T-TAAT-TAA-A-CA-AAACAA--
gi|16 : -AAAG-GAGCTC-ACT-ATTTCATAAAGATT-AGG-AATAATCTCA-TGTTTGCCAAAAAGTGAC-AGACACGGACACAAAATTT-TGGAAAAC-T-GATGTCC--TA-TAACATTC--G-------GAAAT-GT-CTTATGTAA-ACT-TATAT--AAAA-ACGTA--TAAGCTA--CGGAAT-T-TAATATAC-GCTAG-ATTATAT-AATATCAG-GTA-CTCAAACTGTCT--TTCTGAAAGG--A-A--GAT--GC--AT---GA-AA--AATA
gi|17 : ttttcttttttttgggggggggggggttgatttttaaaatattcatagtacaaagaataaataacatatatattcc-GATTTTGGTGATGA-A-ATAGTGTTAA-AATG--T-GATG-AATCCACAGTAT-GAG-TTTCGG-CACTG-ATG-TTTTCCAGTC-TTGG-TTGTC-TATGGTG--AAACAA-GATGGAATATATAA-TCATTC-AGTTCAAAATATGTT----TTCT-GTTCCCAG-TATG-TATAATA-CA-AATATC-GT-GTTTGGAAATAAA-GTATTTATG-TTAAAACATGGCA-GCTCCAT-GGTGTGAAAAATAA-TTGGCG-ACTTCTTTAGAATGAGAA-TGGAAAaaa
gi|18 : GA-TG-AT-AC-ATCAT--C-TTGCCCTTGATGGGAATC-TAAGTCACT--TTTT------TAGCTTTAGAT-ACG-TTTAGAG-TTTTTTCTCCA---AAGCTTT-CTGGTTTTAAGG-TA--AACTGTACC-----AAAACA-AA-AATTGTTTT-GGATCGGAT--CAAAAAA-----TTTCAGAT-C-TGGTCT-TTTCA-TCATT--C-A--GAT-GGAA--ATTG--CT--GGG--CT-CAAC--AACT-TTT-AA-C-TTAC-TAGGgt
gi|19 : gcgcG-TCTTTT-GTT-TATAAG-GT---T-TTA----AGGTTTCT----TTTTAATGTGGTAC-AA--A--TACGATAATT--TT--ATA--AAATTGGA-TGA-A-ATT-T-TAA-AT-----AATT-TTAA-A-G---CTTCTAT-TCTTCA-A-A----GTGGCTTT--TTAT-TAG-AA--GA---ATT-T--CAT---------------T-GAT-GTCGTC-AGGG-AG-ACCCTGTT-T-C-----T--CCGTA--C----ATTT-------TTC-TTCTTTGTGC-A---GAAAT---TCTTG-CAATT--CTC---------AT-TAA-A-CA-AAAccaaaactaatataggtttttt
gi|2 : TGGATAGGGGAAGGGGAGGAAACCTTCGAAGTACTTTTGTAGGTCTCGAATTTCTAGGA--ATTATTTAAAC-AAATAACTTTAAAAAAGtcatgat
gi|2 : tatgataagatctcgtgctcgccAAGTTA---GACAGGCATTATCCACAAT---CTGGAGGGGTGAAATTAT-TA-GAGGAGAGGTTCT-TA-ATTGTACTA-AAAAATA-ACATGAAAA-AATAACAAAATCTTCCTAGAGTAGCCGATGG-TTACA--CAACAG-AATTC-TTCAATTTTTTTT---GGAATG--------------ATATTAAAA--TATTTA---TGT---TGTAAAGAG-CCATAAA-TTGTAT-TTTTGTAA-GAGG-AAACTT-CCCTACTTCACAAAGACTAGGA-ATT-ATTTCT-TGTTTACCTAAAGGTGAC-AAGCCAAGAC---AGTTTT-ATAACAA-TT-GGAGGCC--AATTTACACTT--T-------TAAATGGTAC-TATACAACAAT-TATATTCTGCG-TTGTC--TTAGCTACTCAGAAT-A-AAAAAAAGTTTTGGAATTATTT-AATATATG-ATA-CACAGTCTGGGT--TTTTG-AAGG--A-A--GATTAAT--ATAGGGAGAG--AATACTCGATTTATTT-ATGACATGTATG-C----ATTACACTGAAAGGAAAC----AAT---A--TC-CAGGTC-ATCT-AGTACTTC-A--TG-A-T-TTGAGAAGGCCTTTGA--CT-C-A-TG-CAT-G-TCTTTC-ATT-TATAAG-GT---G-TTA----TA--CTAT----TTTGGTTTTGG--G-GA--A---AC------T--TT--ATTCCAAG-TGGA-TAA-AGATT-T-TAA-ACT--CAAATT-TCAG-AGG---CTTCAAT-TTTACA-G-A----GTGGATTT--TTAT-CAG-AA--CA---GTT-CGACATA--C-AAAAGAGG--G-GGT-GTAGAC-AGGG-GG-ACCCTATT-G-CCA---G--CCATATTT----ATTCATATTTATGC-T------GGC-C---GAAATA--TCTTG-C--------CAATAGT-TAAT-TAAGA-CA-AAACAA--AGGTA-TATAAAG--G--AT-A---TATGT----A------TAAA--------------AAAACACTGAAACA-TAAGGTTATC-ACAAT-ATATGCAGA-TGAAT-AC-TTCCCCAC-TAGCCCTTGATGGTTTCACAAtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacaatactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|2 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgtt--AA---TA-CTCCTAAAAACT-AA-AATTG-TTT-GATTTGGTTTGCAAAAAAAA---ATTCTGAA-CCAAGT-T-TTCCA-CCATTACCAA--GAT-GGGA--AATAGATT--GGGTGATCAACA--AACC-TTT-AA-T-TTAT-TAGGT-AT---TAATGT--CT----TTG-A--TC---GAG-AAA-ATTGAA-GATTTT----AAATT--TTT---GGA--CTC-CAAATT--CCT-AA-AATTGTT---GCTC-TGATTAAAC-A-GTG-GAGGAGA--GAATTC-A----AT-T--ACTCCT-ATT--GGTCGG-GT-C-ACTG-TGA-TTTAAA----CCT-TGCTTAT-TTGCCA-AAATTAAATC-ATT-TGT-TCAT-ATCTG-TC-GTTCCTAC--TCCT-AAA-AAGG-AGG-A-CAAT--------TTCAATA-T----TT---ATGCCAAAATT-----T----TATTCG-AATTCTTG----TGG-AAGTCTAGTGT-AGATA-AAGTC---CAAGAGGTCGTAATAAC-----C---CAA-G-ACATATCTTATCAGTG-----TATAAGATG--T--AGGTA----TAAACCAACTTTAATTAT---ATCCCTGAAGA---TGCTCATG-GATTAAAAGGCTTACTAAGTCAGATTGTCATAAATTCTTGGATTA-ATA-TTTTGTGCTGTG-----TATGGAAATGAAT-ATTC-TTATGAAG-TATAT---GATTTTGGAGATAT-TTAT----TGAAGAATGG-tactcctaaaaactaaaattgtttgatttggtttgcaaaaaaaaattctgaaccaagttttccaccattaccaagatgggaaatagattgggtgatcaacaaacctttaatttattaggtattaatgtctttgatcgagaaaattgaagattttaaatttttggactccaaattcctaaaattgttgctctgattaaacagtggaggagagaattcaattactcctattggtcgggtcactgtgatttaaaccttgcttatttgccaaaattaaatcatttgttcatatctgtcgttcctactcctaaaaaggaggacaatttcaatatttatgccaaaattttattcgaattcttgtggaagtctagtgtagataaagtccaagaggtcgtaataacccaagacatatcttatcagtgtataagatgtaggtataaaccaactttaattatatccctgaagatgctcatggattaaaaggcttactaagtcagattgtcataaattcttggattaatattttgtgctgtgtatggaaatgaatattcttatgaagtatatgattttggagatatttattgaagaatgggttttgcaaggaaaaaaatgagca
gi|20 : tatgataagatctcgtgctcgcctggataggggaaggggaggaaaccttcgaagtacttttgtaggtctcgaatttctaggaattatttaaacaaataactttaaaaaagtaagcgatgtgttgggaattctaaaacagattatatacaaaaacaatcatgagatattggacaatgttaaatttattttacgaaactagaaactttaatacacaaattaatgattcacaatttaatcaatgatgatttgggagaacatcccatctctgattatcatattctccgttaagttagacaggcattatccacaatctggaggggtgaaattattagaggagaggttcttaattgtactaaaaaataacatgaaaaaataacaaaatcttcctagagtagccgatggttacacaacagaattcttcaattttttttggaatgatattaaaatatttatgttgtaaagagccataaattgtatttttgtaagaggaaacttccctacttcacaaagactaggaattatttcttgtttacctaaaggtgacaagccaagacagttttataacaattggaggccaatttacacttttaaatggtactatacaacaattatattctgcgttgtcttagctactcagaataaaaaaaagttttggaattatttaatatatgatacacagtctgggtttttgaaggaagattaatatagggagagaatactcgatttatttatgacatgtatgcattacactgaaaggaaacaatatccaggtcatctagtacttcatgatttgagaaggcctttgactcatgcatgtctttcatttataaggtgttatactattttggttttggggaaactttattccaagtggataaagattttaaactcaaatttcagaggcttcaattttacagagtggatttttatcagaacagttcgacatacaaaagagggggtgtagacagggggaccctattgccagccatatttattcatatttatgctggccgaaatatcttgccaatagttaattaagacaaaacaaaggtatataaaggatatatgtataaaaaaacactgaaacataaggttatcacaatatatgcagatgaatacttccccactagcccttgatggtttcacGAAAGCTGG--CTTA-AAATGG--TTGGAGTG------AA--AACGTG---TAT---ATTTTTAAAT----TAC--ATATGATCAAA-CGTTAACAA-CT--G---GTTACAAAC-CATGG-TTAGATA-TTTT---CTTTG--ATCC-TGGCAAC-AA--GTGG-T-ACAAAATT-TGTTA-GATTTTCGTGATGA-ATATG---TTAA-ACTGG-TATATG-A--TCATAGT---GAT-GCTTGG-CAA-G-ATG-TTTT-CAGTGATgttttgcaaggaaaaaaatgagca
gi|21 : -AAGG--A-A--AGA--AT--ATG-GAAGAG--ATTGCAAGATTCATTT-CTGATTCAGA--------ATTATAAT-AACTGGACT-----------T-T------------T-AGTAT-TA-T-TTG-ATT-TGGAGGAAGCCTTTGA--TT-CTA-T-TCCTGG-TCATAT-ATT-TATGAA-GTACAT-GTATAAGAA--TTG-----TTTGGATTTGG--A-GA--AAGTACGACGT-C--TT--ATT--T-A-CGGAGTAA-AGATgtt
gi|22 : catctcattttggatgatacCAGGGG-TG-ATCCTGTT-G-C-----G--CCATAT------ATTT-------TTC-TGCTTTGTGT-A---GAAAT---CCTGG-C---T--CTC-----T-TGAT-CAA-A-CA-AAACAA--AG--A-TATAAAA--G--GT-A---TTGTG----A------TTAATGA-T---------AAA------GAACA-TAA-CTTATC-TCA---GCATGCTGA-CG-AC-AC-TTC----T-
gi|23 : TGCCTAAAGGTGAT-AAACCAAGAC---AATTTT-TAAACAAC-T-GGCGTCC--AA-TTACACTT--T-------TAAAT-GTAC-CATACAA-GTT-TATGT--CGGG-TTGTC--CAAGTTT--CAGAAT-T-TAA-CAGGTCTTGG-ATTATAT-AATTTCTG-ATA-cttg
gi|25 : aAATATG-----AAA-AATAACAAA-TCT-CCAGGT--AGT-GATGG-TTATA--GTGTTG-AATTT-TTAAA--TTTTTT---GGGGGT--------------AGATCTGAAAGAAATTA---TAT---T----AAAGTCAATTAA-TTGTATATTCTCCAA-AAAG-GAGCTT-CCC-AT
gi|26 : CTAGAGTAGGGG--ATGTACT--AACT-TTC-AA-C-TTAT-TA-GC-AT-AGGAATTG-TCT---GTGG-A--GTAGAGAATAAATATAGTT-GATTT-----AAATT--ACAAATGGAGGGTG-CAGATACGCCA-AAGAGTTAA
gi|27 : -TTTTCCAGTCAT-GG-TTGTC-TATGGTG--AAA-AA-A-TGGA-TA-ATAA-TCATTC-AGTCCAA----T-TTATTATTTTTGTCCC--AATATGGTATAATA-CA-AATCTCTGT-GTT-GGAAgt
gi|3 : TACTTC--G-CTTATTT-G-TATCGG-ATA-GTCAAG--GGTTGTTTATA-AAGGTCG-A--CAT--AC--ATT-GGAAGAGTAATGCAAG-TTTGTGA-A-GATCTCG-TGCT----CTTTCACTGAATTGGACC----AAT---A---CACAGGGA-TATT-TGAAC-TC-AGTTG------TGAAAAAGCTTTCGAGACT-C-A-TATC-TGGATAGTTT-ATC-TATAAA-GT---T-CTA----AC--CTATCTACTTTGGATTTGG--A-GA------------------------------TGGT-GTA-AAATT-TGTAA-A-A--CAAACC-ATAG-A-GGAACATCTGTACTTACA-A-A----GCGTATTTCCTT-T-CAT-AA--CACATATTGCATTATA--C-CA---GAG--G-GTT-GCAGACAAGGA-GT-ATCCTATG-A-CTAGCGA--CCATTTTT----GTTA-------TTC-A------TGG-C---AGAATGTATCTAG-C---TATTTC-----T-TG---CAA-G-CGCAAATAA--AG--A-TATTAA---G--GTGA---TATGT----A------TGAATGA-T---------GCG------GAGCAACAA-AATCTC-TCA---ATATGCAGATCT-ACCAC-ATT----T-TGGCTCTTGATGGTTCCCCAAAATCTCT--TTTTGCGTTATGCTCTT--AT-AC--ATT-AACACTTTTACTCTA---C--TTTTTCTGGATT-CAAA-TA--AA---TAGCTC--CAAAA-A-AA-AATAG-TTT-GGATAGGCTT-CTAAAACAT---TT-CT-AA-G-AAGT-A-TATCA-CCATA--CAC--AATAGGAAATGCTGGAGT--GGG--ATGTACT--T-CT-TTC-AAGC-TTAT-TAGGGCATTG-GAATTT-CTT---GCCG-A--G---AGAATAAA-AT-GCAAGCTTTTTTCTAAATT--AC----AAT--ATTTCAGATA--CCA-AA-AAATAAA---GCTTATGAT---AC-A-GTT-GAATAGAAAGAA----A----ACTC--ACTC-TCATT---GTCGG-CG-C-ACAG-TTG-CCAAAA----CAC-TACTTTT-A--CCT-AAGCTTAATCCATC-TTTGTTAT-GCA------CTGCCAAA--TTCA-AGATAAAG-AATAA-TG-T--------CTTC-TC-T----TG---A----ATAGTT-----T----TTTT-----TTTATTACTATGG-A-ATTCAAGATT-GACA-GGGTT---CAAGA-------CAAACTGTTACTC-CAA-G-ATTCACTTGAAAAGTGG--CTTA-AAAATGGTT--GAGTG-----AAA--AACTTC-----------CTTTAAAGACTGTAC--ATGTGATAAGAACGTTAACAAACT--GATC---ACAAAC-CATGG-TTAGATA-TTTT---CTTTTAAATCCATGGCAAC-AAT-GTGGCT-ACAAAA-T-TTTTGCGA-TTTGGTGATGA-ATATC---TTAA-AATGGTT-TATG-A--TCACAGTAATGAG-TTTTGGCCAT-G-ATGTTTTTCCAGTCATGGG-TTGTCGTATGGTGAAAAACAA---TGGA-TA-ATAATTCATTC-AGTTCAAAAGAT-TTA----TCT-GTTCC--G-TATCGTATAATA-CA-AATATCTGTCGTT-GGAAATAAAAA-GCTTATGTTTAAAACATGACATGCT-CAT-GGT-TG-AAAATAATTTGGCGAACTTTTTTAG-ATGAAGA-TGTAAA
gi|30 : -G-----AAA-AATAACAAA-TTT-CCGGGA--AGT-GATGG-TTTTA--CAGTTG-AATTT-g
gi|4 : atAAAAACCT-G-CGTCCCCAA-T-ACACTT--TCTTTTACTGAAT-GT-CTTGTATAA-ACT-TATAT--CAGG-ATGTA--TAAGCAA--CAGAAT-T-ACATCTACCACTAG-ATTATT--AATATCAGCGTAGCTCAAACTGGCT--TTCTG-AAAGCTG-AATGAT--AC--ATA-GGAGAA--AACACTAG-TTTATTT-ATGATCTTGATG-TTTTTCTTTCACAGAAA---GCT----AACCAAAT-TC-CAGGAT-TACT-AGTAC-TT-T-TTGGATTCTTGAAAAGGCTTTTGA--TT-C-AATTTCTTGG-TCCTTTTATT-TACAAACGT---T-TTA----AA--ATAT----TTTTGGTTTGC--G-GATCA--TAC------TGTTT--AC---GAT-TGGA-TTA-GAATT-C-TGA-ACA--CAAATTCTCAACA-G---CTTCGGT-TCTACATA-G----GTGCGTTT--CTATTCTGCAA--CA---GTT-CAAAATG--TTGA---ACGTCG-GTG-GCAGACAACGGCGGCATCCTGTTTGTC-----A--CCATATAT----TTTC-------TCC-T------TGTGCTTAGCAAT----CTGG-C---T--CTC-----TCTGATGCAA-A-CA-AAACAA--AG--ACTATAAAATTG--CT-A---TCTTGTTGCA------TTAACGA-TTTTTCTTTTAAAC-----GAACA-TAA-ACTATC-TCA---GTATGCTGA-CG-AC-AC-TTCCTC-T-TCTCCTTCGAATGTACTCCTAAGTCTTTA-TTCCGC----TGCCCTTCGATTACCTATT-GAT-TTTTTTCTCAA---AA-TTCT-CAGGACTCCAAA-TA--AA---TACTTC--AAAAACTTAA-AATTA-TCTCGGATTG-AT--CAAAAAAAT---TCTCGGCATG-AAGT-CATTTCATCCATTT-CGACCGAT-GGAA--GCTGGATT--GGGG-ATGCACT--GACT-TCT-CA-T-TTATATAGGA-AT-A-CA-TTT-TCGAGGGTAG-ACATT--A--ACAAA--TTACG-AACT------AAATT--AT----GGA--ATT-CAGATA--CCA-AA-AATAAAA---GCTA-TGATACAAC-A-GTGCGAGAAGAA-GCC----G----AT-CTAACAC--CAATA-GGTCGGTGT-A-ACAGCTTG-TT--AAG--ACAC-TACTTGTCC--CCA-AAACTCAATC-ACC-TTT-TTAT--TCTC-CT-CTACCAAA--CCCTAAAA-AAAG-AG--ACTATT--------TTCA-TCATTAAGTA---A----AGAGTT-----A----TTTC---AATTCATT----TGA-ATGCCTAACATCAGATA-AAGTCAAACAAGA-------ACAACTGTTAC---CAACG-ACCTATTTGAAAAGGGGGTCTCT-AAAATG--
gi|5 : AGATGGGTGGAGGAGAGCGAG-AAATCCACTAAATATTTCTGT-AACCTAGAA--TCTAGAAACACTCCTT-AA--AAACAA--TCAAAAAAGGGTTAAAACTATCGAAAAGGTAATG-ATTGATACTCATTCGGA-CATgtgcgttcgattatttactaaatttattatttctcttgaaatgttcatggata
gi|5 : cacgatcaTG-AACGTGAAATTTG-T-TAGCGT--TA-AAGAATATG-----AAA-AACAACAAA-TCAACCGGGA--AA--GATGG-ATTTA--CAGCAG-AATTT-TACAAGTTCGTTT---GGAATGAAGCTATTTATTAAAGATGTAAA--GATCTA---TATTACA----AAAG-CACTTCA-TCATAT-ATTTCAGT-GTAT-ACATTTGCCA-GCATCACAAAGACT-TGAGATTA--TACTATGTTAACACAAGGGAGAT-AAAGC-AGAG---AGTGTT---AAAAA--T-GGCGACC--AA-TAACTCTT--T-------TAAA--ATATTTCTGCAgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggtgaacgtgaaatttgttagcgttaaagaatatgaaaaacaacaaatcaaccgggaaagatggatttacagcagaattttacaagttcgtttggaatgaagctatttattaaagatgtaaagatctatattacaaaagcacttcatcatatatttcagtgtatacatttgccagcatcacaaagacttgagattatactatgttaacacaagggagataaagcagagagtgttaaaaatggcgaccaataactcttttaaaatatttctgcacggtgcttttaacaaattatacttctttctatctggtctt
gi|6 : cacgatcaagatgggtggaggagagcgagaaatccactaaatatttctgtaacctagaatctagaaacactccttaaaaacaatcaaaaaagggttaaaactatcgaaaaggtaatgattgatactcattcggacatgatggatgaaatcagagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaataaaggTC-----T-TGAT-CAA-A-CA-AAACAA--AG--A-CATAAAA--G--GT-A---TTGTG----A------TTAACGA-T---------AAA--------ATA-TAA-ACAATC-TCA---GTATGCTGA-CG-AC-AC-TTC----TCTTGCTCTTGATGGTACTCTTAAGTCCTT--ATTCGC----TGCCCTT-GAT-ACT-ATT-GAT-TTTTT-CTCAA---AA-TTCT-CAGGACTAAAAAATA--AA---TATTTC--AAAAACT-AA-AATTA-TCT-GGATTGAAT--AAAAAAAAAAAATCTCGGAT-G-AAGT-A-TTTCA-TCATT--CGA--GAT-GGAA--GCTGGACTG-GGG--ATGCGCT--GA-T-TTC-AA-T-CTAT-TAGGA-AT-A-TATTTT-TCG---GTAGAA--TT--AG-ACAAA-ATTATG-GAACT-----AAAGT--AT----GGA--ATT-CAGATA--CCA-AA-AAGAAAA---GATG-TGATACAAC-A-GTG-GAGAAGAA-GGATTCTA----A--C--AC----CAATA-GGTCGG-GT-A-ACAG-TTG-TT--AAG--ACAC-TACTTAT-C--CCA-AAACTTAATC-ACC-TTT-TTAT-TTC----T-CTACCAAA--CCCT-AAA-AAAG-AGA-A-TA-T--------TTCA-TCATTAAGTA---A----AGAGTT-----T----TTTC---AATTCATC----TGGAATGCTGA--ATCAGATA-AAGTC--AAAAGA-------ACAACTG---------A-G-A-TTATTTGAAAGGGGGT-CTTA-AAAcggtgcttttaacaaattatacttctttctatctggtctt
gi|7 : AATGGAATGCGGAAA---AT-TC-CACGTC-TTCT-AGT-T-TA-A-TTG-ATT-TTGAGAAGGCTTTTAA--CT----------TGG-TCCTTC-AGA-TATAAA-GC---T-TTC----AA--GTAA----TTTGGTTTCGG--A-TA--A--TAT------T--TC--ATT--CAA-TAGA-TAAGATATT-T-TAAGACA--CAGATA-TCAG-A-G---CTTTCAT-TTTACA-AGA----GTAGAGTT--TTAT-CAG-CA--TA---GTT-AGATATA--C-AA---ATG--G-TAT-GTAGA-AA--------------T-G-C-----A--CCATATTT----ATTT-------CTCATATG---TGC-T---GGAAT-----------------------------T-CAA-A-CA-AAACAA--AA--A-TATAAAA--GACAT-A---TGTTC----AGTGTATTGAA-AA-C---------ACA------GAACA-TGA-TATATCGCCATATATATGCAGA-AT-AT-AC-TTCA---G-TAGCTCTTCATGGTTTAACTGCATCCCTGGTATTGG----TG--TTT-GAT-ACA-ATA-GAA-TTTTT--TGTACAGT--TTTT-CTGGTCTAAAGA-TT--AA---T-TCTT--CTACACG-AATAGTGG-TCT-GGATTGATT--AAAAAAAA-----TTCAGAA-C-CAGT-T-TTTCA-TCATA--GAA--GAT-GGAA--ATTGGATT--GAG--G-GTTCT--TAAT-ATCTAA-C-TTAT-TGGAT-AT-T-CAAATT-TCT---GTTG-A--tggt
gi|8 : cAGGAT-TACT-TGTGC-AC-A-TAG-AAT-TTGAAAAAGCTTTCGA--CT-CCA-TATCTTGG-AAGTTT-ATC-TAGAAA-GT---A-CTT----AA--TTAC----TTTGGATTTGG--G-GA--T--AAT------A--TA--ATT--ACA-TGGG-TTA-AAATT-T-TAA-ATA--CAAACA-ATAA-A-G---CATCTGT-ATTACA-A-ATTAAGCGGTTTC--CTTT-CAG-AA--CA---AAT-TGAGATA--C-AG---AGA--G-GTT-GCAGACAAGGA-G--ACCCTATC-G-C-----A--CCATATTT----ATTTA------TCC-TATG---TGC-A---GAAAT---TCTAG-C---TA-TTC-----T-TG-T-CAA-G-CA-AAATAA--AG--A-TATTAAA--G--GT-A---TAATG----A------TGAATGA-T---------GAA------GAGCA-CAA-AATCTC-CCA---ATATGCAGA-CG-AC-ACATTT----T-TGGCTCTAGGTGGTTCCCAAAAATCTCT--TTTTGC----TGCTCCT-GAT-ACA-AT--AAA-TTATTACTTTA---T--TTTTTCTGGATTACAAA-TA--AA---TAGCTC--AAAAACA-AA-AATAG-TTT-GGACAGGCT--CTAAAACAT---TTCCTAAA-G-AAGT-A-TATCA-CCATA--CAA--GAT-GGAA--
gi|9 : AA-ATTGAA-GATAT-----AAATTTTA-----GGA--ACT-CAAATT--CCTTAA-AATTGTT---TCTC-TCATTGAACGA-GTG-GAAGAGAA-GAA----ATTCTAT-T--A-TCCTTACTCTGGTCGG-GT-ACACTG-TGA-TTAAA----ACACTTGCTTAT-T--CCA-AAATTAAATC-ATTGTGT-TCATAATCTC-TTGCTACT-----CCTT-ATA-AAAGTAC--A-TA-TGTTCCATATTCA-TT-T----TATTCA----AAAATTCTTTAT----TTTG---AATTCTTG----TTG-Ac
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): GCTTACTAATCAGAATGTCATAAATCTTGGGATTAATATTTTTTTTGCTGTGTATGGAAATGATATTCTTATGAAGTTATTATGATTTTGGAGATAGTTTTTATGATCAGAAGATGTTTCTTAAGGAAAAAA
Unaligned ( gi|28 ): TCCCTACTTCCAAACGGGATACAATTTCATACTTATAAATTCAAAATTTTATTTCGATTCTTACGGAAATCTAATAGTTTATGGTAACACAAGACTATCTATC
Unaligned ( gi|29 ): CTTGAGCAGAAAGAAATGAAAAGTGGTCTATTTCATGCCATGCTTTGGATG