lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111 222222222222222222222222222222222222222222 1111111111111
lowQualScore : 1 1 4444444444444444444444444 1 1 1 11 1 2222 33333 111 222222 333333333 11 2222222 1 22222 2222222222 222 1111 111 1 1 1 1 3333 11111 3333333 1111111111 444444444 44444444444444444444 333333 3333333333333333 2222 1 2 1 66666666666666666666666666666666666666666666666666666666666666666666666666 8888888888888888888888888888888888888888888888888 1111 555555555555555555 22222222222 11 1 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 222 11 11111 11111 2222 111 1 33333333333 1 1 1 1 333333333 333333 11 22 2 222 11 3333 1111 2 11 111 111 222 5555555555555555555555555555 22 111 11 222222222 1 1 33333333333333 11 3333333 66666666666666666666666666666 1111 4444444444444444444 1 1 2222 1111111111 1 1 3333333333333333333333333333333333333 222 3333 1 1 111 22222222 22 33333333333333333 11 111 11 22222 3333333333 11 1 1111 1 11 2 2 2 2 22 2 22 2 4444444 333 1 55555 2 22 2 111111111111111111111111111111111111111111 333 2 2 1111111111111 333 11 4444 33333333
lowQualScore : 0 0 2 4 1111111111111111111111111 44 0 0 11 3 0 4 0 0 7 3 3 00 0 1 3 6666 4 1 2 4 1 55555 8 3 0 3 2 777 2 666666 2 333333333 3 2 5 3 1 0 33 3 44 0000000 0 6 55555 1111111111 0 3 222 3 8888 111 0 0 444 8 0 0 1111 22222 1 0 0000000 9999999999 3 000000000 0 22222222222222222222 888888 3 6666666666666666 5555 2 6 1 2 0 1 7 77777777777777777777777777777777777777777777777777777777777777777777777777 1 2222222222222222222222222222222222222222222222222 7777 3 7 333333333333333333 22222222222 9 6 7 4 88 7 1 33 55 0 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 555 66 0 77777 1 77 88888 1 0000 9 4 1 555 3 3 88 33333333333 6 3 444 4 5 5 2 5 888888888 000000 88 2 3 77 0 111 88 0 7 0000 6666 6 3 88 33 0 8 8 1 7 222 1 1 88 888 333 3333333333333333333333333333 0 44 1 666 88 3 777777777 5 7 0 6 1 88888888888888 2 666 6 3 22 0 3 0000000 77777777777777777777777777777 0000 7 6666666666666666666 0 0 2 5 3 1111 2 4444444444 3 1 7 66 1 3 7 3 3 4 4 2222222222222222222222222222222222222 4 4 2 4 000 8888 0 0 6 5 3 555 6 88 4 1 77 6 1 55555555 4 77 00 99999999999999999 8 88 3 4 666 6 3 7 6 88 4 66666 8888888888 6666 0 8 8 11 1 0 0 7777 0 11 0 0 0 0 77 0 77 0 4444444 555 5 00000 0 3 77 0 666666666666666666666666666666666666666666 4 555 0 2 0 2 0000000000000 555 88 2222 55555555
lowQualScore : . . . . ......................... .. . . .. . . . . . . . . .. . . . .... . . . . . ..... . . . . . ... . ...... . ......... . . . . . . .. . .. ....... . . ..... .......... . . ... . .... ... . . ... . . . .... ..... . . ....... .......... . ......... . .................... ...... . ................ .... . . . . . . . .......................................................................... . ................................................. .... . . .................. ........... . . . . .. . . .. .. . .......................................................................................... ... .. . ..... . .. ..... . .... . . . ... . . .. ........... . . ... . . . . . ......... ...... .. . . .. . ... .. . . .... .... . . .. .. . . . . . ... . . .. ... ... ............................ . .. . ... .. . ......... . . . . . .............. . ... . . .. . . ....... ............................. .... . ................... . . . . . .... . .......... . . . .. . . . . . . . ..................................... . . . . ... .... . . . . . ... . .. . . .. . . ........ . .. .. ................. . .. . . ... . . . . .. . ..... .......... .... . . . .. . . . .... . .. . . . . .. . .. . ....... ... . ..... . . .. . .......................................... . ... . . . . ............. ... .. .... ........
lowQualScore : 0 0 5 0 2222222222222222222222222 00 0 2 55 0 2 0 0 0 2 2 5 00 5 2 0 5555 0 2 5 0 2 00000 8 0 2 2 5 000 5 222222 5 000000000 5 5 0 2 2 2 88 0 00 8888888 0 5 00000 8888888888 2 2 000 2 0000 000 0 0 888 8 0 0 2222 22222 2 2 0000000 7777777777 7 000000000 7 77777777777777777777 333333 7 3333333333333333 7777 3 7 2 5 0 2 2 22222222222222222222222222222222222222222222222222222222222222222222222222 2 0000000000000000000000000000000000000000000000000 0000 0 0 777777777777777777 22222222222 3 7 8 2 88 8 0 00 00 5 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 222 00 8 55555 2 00 55555 2 5555 5 0 2 222 3 7 00 33333333333 7 3 000 0 5 5 5 5 555555555 000000 00 5 0 55 0 000 00 7 7 0000 7777 7 7 33 33 7 3 3 0 0 777 0 0 00 333 333 7777777777777777777777777777 7 33 0 777 33 7 000000000 0 7 7 0 2 88888888888888 2 888 5 5 55 8 2 5555555 22222222222222222222222222222 8888 8 5555555555555555555 8 0 5 8 0 0000 2 8888888888 5 2 8 55 0 3 3 3 7 0 0 5555555555555555555555555555555555555 0 0 5 0 555 5555 7 7 0 3 7 777 7 00 0 0 33 7 0 77777777 0 77 77 77777777777777777 3 33 7 0 777 7 7 0 7 33 7 77777 0000000000 8888 6 0 0 00 0 6 8 0000 6 00 0 0 0 0 55 0 55 0 5555555 000 5 00000 0 0 55 0 555555555555555555555555555555555555555555 0 000 0 5 0 5 0000000000000 000 55 5555 55555555
consensus : TAATGTTCT-TG-GTTTNATNGGTTCTGGTTTTGGAAA-GCG-CT---AG-------TAATAT-GACACCCACGACATGNTTTCGCANA-TTTCTC-CACNTCTTTGTCCATNCCTGGCCACCAAACTTTATTTCTCAACCGCTGCTTCGTAC-CNACNATTCCCGAGTGTCCTTCGTGNGCTAGA----TCGTACACACTGTTTTCGTA--AACTTT----CGGGAATCAC--TA-----TCCNCGATCCACGTAACACTAAATACCCTACACAAC--ANAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCGTCTGTTTTCCTTGAC-GAAT-TTACGA-ACTTGGACAA-GTT-CG---TCATCCTTCCTAGAAGCTTCTTC---AACCTCTCGTGTCGACAT-GGCNTTGGGG----T--TGCTTCCCTTGCTATAAA-CCT-ACATAGTC--CT--CAGATT------CNTCTG---CGTTTCTG---TCTCCAGATG-G-CTTGCCTACCAAGACGTGATAGCGCA-TCCGCNATGTTCT-ACGTTCC--GG---TGCAATGTAC---ACT---TTAAAANTGTA--TNGTCATAAGNTT-----CAAAAGT-CCCATCGTTCGATTCT--CGCA-TG--GGNCGA-----GACTTC--TT----TCCATACAAA-NTTCC----AGCGGTTTGTGGTCTGTNA-C--TGAT--------TTCAAACTC-CACA------CCATANACGTANATGTGAAATCTCTCACACGCCCAN-ACTACCGCTAGNGCTTCTC------T-C---T---TGTAG-TC---GAAT-AACTG--------CG-------T----------TCT-----------GCTN------GCGTAAC-GATAGCNCGAGTTTCACC--G--CCGTNCTCTTGNA---GCAACACG---GCTCCCAGNCCGACGGGACTCGCGTC-ANTCATAAT--TG-GNC---TTTCTTCGGA-TCTCGNTTGNAATGCTACCAGCGTTTTCANATCTATCAAACAGTTCTTTAGCATCTCAAAACTTCGNTNCCGTTCGGTCCACCCCCAAACGAATGCAGAGTTCTTCTTNGTCAA-CG-CTC-ANCGGTGCAGCNATCGTCGANAAATTCGGTATGAACCGCGCACAATAGTTCGCAAGTCCCAGGAAACTTCGCACTTCAGAG-CGCTA---GTTGGCT--CGT-----TGGCGTC--GGTTGC-A-TTTGATTTTCTCGCTCGT-C-GGTC--CTATCGC-CGTTCT--TGA-AACACGTGCCCCGTAAA-GTTATCT-CGNTCATCCCGAACTCGCACTTNTCACGGTTNAGNGT-NAGTCCTTGTCTTTCAATC--TCTG-----TACGNAACACT---GC--AG-CCTTTCATCATGNTCCGCCTGGTCTGCGG-----CCATGAA-CAACGATGTCATCGGAGANGTTN---CGTACTCCC-TCACGAC--CNTGAANCACTTGNNAAATCACTCGTTGATAT-TTTTCTGGA-GTCGGCGANATNCCGAACATCAGCCGTTTGTAGCGATATAAACCGTCATGTGTTGCGAANGTNGNANTCTCCCTCGATGACTCCTCGTCAAGCTCAATTTGGTGAT-ACC-CTNCGG-AGGTCNAGTTTNNTGAANACCTTNCTCCCGTTCACGTC-TANTAGAATTTCGTCTACAGTAGG-ATAGGATG-CGTTTC-CG--T-ACCGCTGC--ATTCGCNCG-C-TCATATCGACACANAATCGAATNT--CGCCG-TT--CTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGATTTCCAGTTCCCTCAGTGCTAATAAAGGGAATTCGGTACGATCTGGCTTTGCGCTTGAAGGCAAGTTCCACTTGTTCTTTGTCAATATGTAGATAGGCATTCANCTTAGTAAAGTTCTTTTTCTATATTTTTTTTGCCATATTTCCCATCTCAAAACACCTTATNCAGATAGAAAATTNTTGAATCAATGCCGCCCAGCCGTACGATTCTGTTTACAAGTATTAATCTCTCCAAGCTTCAAAACACCCTAAAGGTCGCCATTGCGGGGTTATTCCTTCGCCC
Reference ( gi|2 ) : TAATGTTCT-TG-GTTTGATAGGTTCTGGTTTTGGAAA-GCG-CT---AG-------TAATAT-GACACCCATGACATGATTTCACATA-TTTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTAC-CC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-----TTGTACACACTGTTTTCGTA--AACTTT----CAGGAATCAC--TA-----TCCTCGATTCACGTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGAT-GAAT-TTACGA-ACTTGGACAA-GTT-C----TCATCCTTCCTAGAAGCTTCTTC---AACTTCTCGTGTCGACATCGACCTTGGAG----T--TGCTTCCCTTGCTATGAATTTTTACATAGTC--CT--CAGATT------CCTCTG---CATTTCTG---TCTCCAGATGTGTCTTGTCTACCAA-ACGTGATAGCGCA-TCTGCAATATTCTGACGTTCC--GG---TGCAATTTTC---ACT---TTGAAATTGTA--TTGTCATAAGTTT-----CAAAAG---CCATCGTTCAATTCT--CGCATTG--GGTCGA-----GACTTC--TT----TCCATACAAAACTTCC----AATGGCTTGTGGTATGTCA-C--TAAT--------TTCAAACTC-CACA------CCATACAGGTAGATGTGAAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTCTT------T-C---T---TGTAG-TC---GAAT-AATTG--------CG-------T----------TCT-----------GCTA------GCGTAACTGATAGCTCGAGTTTCACC--G--CCATACTCTTGAA---GTAACACT---GCTCCAAGACCAACATTACTTGCATC-AGTCACAAT--TG-GGC---TTTCTTCGCA-TCTAACTTGAAATGTTACCAACGTTTTCACATTTATCAAACAGTTCTTTAGCATCTCAAAACTTCGCTTCTGTTC--TTC-CCCCCAAACGAATGTAGAGCTCTTCTTTGTCAAGCGTCTC-ATTGGT-CAGCCACAGTTGCCAGATTTGGAATGTATCTCGCACTAAAGTTTACAAGTCCCAGAAAACTTTTCACTTCAGAAACACTA---GTTGGCT--CAT-----TGGCATC-AAGTTGCGA-TTTGATTCTCTCACTTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAATGTTATCT-TGTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTGTCTTTCAATC--TCTG-----TACACAACAC----GC--AG-CCGTTCATCATGTTCTTCTTGG-CTACGA-----CCATGAA-CAACGATGTCATCTGAAATGTTA---TGTATTCCC-TCACAAT--CATGAAATACTTGTGAAATCACTTGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAAC--C-----TTTGTA-----------CGTCA-------CAAAAGTAGGATTCTCCCTCGATGATTCCTC-T--AACTCAATCTGGTGGTAACCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCGCTTG-C-TCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTG---TTTGTCAATATGTA-----GC-TTCAACTTA--AAAG-TCTTT-----------------CA-ATTTCCCA--------------ATTCAG---GAA-ATTCTTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|4 : TAATGTTCT-TG-GTTTGATAGGTTCTGGTTTTGGAAA-GCG-CT---AG-------TAATAT-GACACCCATGACATGATTTCACATA-TTTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTAC-CC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-----TTGTACACACTGTTTTCGTA--AACTTT----CAGGAATCAC--TA-----TCCTCGATTCACGTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGAT-GAAT-TTACGA-ACTTGGACAA-GTT-C----TCATCCTTCCTAGAAGCTTCTTC---AACTTCTCGTGTCGACATCGACCTTGGAG----T--TGCTTCCCTTGCTATGAATTTTTACATAGTC--CT--CAGATT------CCTCTG---CATTTCTG---TCTCCAGATGTGTCTTGTCTACCAA-ACGTGATAGCGCA-TCTGCAATATTCTGACGTTCC--GG---TGCAATTTTC---ACT---TTGAAATTGTA--TTGTCATAAGTTT-----CAAAAG---CCATCGTTCAATTCT--CGCATTG--GGTCGA-----GACTTC--TT----TCCATACAAAACTTCC----AATGGCTTGTGGTATGTCA-C--TAAT--------TTCAAACTC-CACA------CCATACAGGTAGATGTGAAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTCTT------TTC---T---TGTAG-TC---GAAT-AATTG--------CG-------T----------TCT-----------GCTA------GCGTAACTGATAGCTCGAGTTTCACC--G--CCATACTCTTGAA---GTAACACT---GCTCCAAGACCAACATTACTTGCATC-AGTCACAAT--TG-GGC---TTTCTTCGCA-TCTAACTTGAAATGTTACCAACGTTTTCACATTTATCAAACAGTTCTTTAGCATCTCAAAACTTCGCTTCTGTTC--TTC-CCCCCAAACGAATGTAGAGCTCTTCTTTGTCAAGCGTCTC-ATTGGT-CAGCCACAGTTGCCAGATTTGGAATGTATCTCGCACTAAAGTTTACAAGTCCCAGAAAACTTTTCACTTCAGAAACACTA---GTTGGCT--CAT-----TGGCATC-AAGTTGCGA-TTTGATTCTCTCACTTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAATGTTATCT-TGTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTGTCTTTCAATC--TCTG-----TACACAACAC----GC--AG-CCGTTCATCATGTTCTTCTTGG-CTACGA-----CCATGAA-CAACGATGTCATCTGAAATGTTA---TGTATTCCC-TCACAAT--CATGAAATACTTGTGAAATCACTTGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAAC--C-----TTTGTA-----------CGTCA-------CAAAAGTAGGATTCTCCCTCGATGATTCCTC-T--AACTCAATCTGGTGGTAACCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCGCTTG-C-TCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCT
gi|11 : TAATGTTGT-TG-GTTTGATAGGTTCTGGTTTTGGAAATGCG-CT---GG-------TAATCT-GACATCCATGACATAATTTCACATA-TTTCTC-CACGTCTTTGTCCATACCTGGCCACCAAACTTTATTTCTCAACTGCTGCGTAGTAC-CCACTAATCCCAAGTGTCCTTGGTGAGCTAG-----TTGTACACACTGTTTTCGTA--AACTTT----CAGGAATCAC--TA-----TCCTCGATCCACGTAACACTAAATATCCTACACAAC--AAAATTCATTA--CGTAAT-GGTAAATAAT-----TAC-T--AT----AGGATTGATCCCATCTGTTTTCCTTGAT-GAAT-TTACGA-AATTGGACAA-GTTCC----TCATCCTTCCTAGAAGCT
gi|7 : ataacgactgaaatagtccaccaacaacaacatattgcctgtagtgttaacggccaagcagatctatcgctaaatcttgccgcaatccagttggTTCTGTGCGTTTCATTGGCTCAGGTTT---------A-CT---AGGTTGACCTACTATTGACAACCAAAACATACTTTTGCAAAACTTCTCATACTTCTT-ATCCATCCCTGGCCACCAAACTTTGCTTCTTAATAGCGACTTCATGG-CAACAATGCCTGGATGTCCTTCATGTGCAAGA----TCAAGAACCCTATCA-CGCA-----TTTGTGGTGGGAAT-AC---A-----TTCGCGTACCTTGTAATACTAATTTCCCAATAGAAC--ACAATTCACCC--CT-TATTGGCAA-TACTGTTTGTAC-TCAAT----ACGAT-G---CCA-CTGTTG--ATTGAC-AGACATTGCTA-ACA-GCACAAAGCT-CGGGGTCATTCT--CT-GATGTCTCTCT---TATCTCACGAGTTGTCATAG-CAATGGGGAAGGT--TGCTTCTTCAGCTACAA--CCTAACATAATCATCTACCAGATCAGAAGACTTCTG---CA------------CTAAAT----CATTCCTAACAAGACGTGAAAGCGTG-TCCGCTATATTCT------TC--GGACCTGAAATGTACCGAACC---TTAAAAGTGTGGGTTG-CATGCG--------CAACAC---CCATCGTTCTATTCTAGCGCA---------GACCTTTGACTTT--GTAGAATATATACA----TTCT----AGCGGTTTGTGGTCAGTGA-G---AAG--------CTCAAACTC-TACA------CCGTATATATAAACATGAAATCTTTCACATGCCCAT-ACGAGGGCTAGCGCCTCTT------T-C---T-----CAG-TCTGAGAGT-ACCGA--------CG-------T----------TCTGTATCACTCAAGCTACGGCTTGCATAAGAGATAACCCGAAATTCACC--G--TCTTGTTCTTGCA---CCAGCACG---GCGCCTAATCCAACA
gi|1 : tttcgaccaaacagtaactgagacggacaaacaccagtcgtggtgtgtggggtatttcgatacataatcagaaatttgtcaagttcagatttccaatctcgaccttcggcatgagcaattcaaacacgtttcaaaattgacctattttatcgttccacctcgccgttcgcctgcggccataaaaggagtccattctggtgatgaagactattgccgttttctaacataaattctttaaaatttgactcgcaaattgaggaccattatcagtatgaattgaaaacagtagaccatgagtaaaaagaactttgacattaacgccatgatattctcagacgttgtttttgtaaactgccattcaaaatatctactgtaataattaactagtacaaaaatatactctttactcgcaatggacctaaaacgatcagggcaagatgtgccatggcgcagaaggtaaT-CG-GTTTTACTGGTTTTGGCTT--GCAG-GTGTCTGTCAG-------TAG-AT-GACACTGACTACACGCTTTGACAAA-TATCTC-TGCCTCCGTGTCCATTCCTGGCCACCATACCTTTTCTCTCAGTCGCTGTTTCGTACGTA-CAATTCCCTAGTGACCTTCGTGTGCCAGAGAAATTGTA-----TTTTTTC-TAAGAAGTTT----T-GGCATCATAATACGAGTTCCAC-ATACATGTAGCAC--AATGCCATCAACGACTGACAATTC--TGAATG-TAT-CCTGCGCAAC-----TCCGT--GTTTTGAAAATTG-T--TGTCTGT----CTTGATCCCAT-TTATGATGTCTG--TTA-TTT-CA---TGATCCTTT---GAGGATTCCTCGCGAA--TGTCGTG--AA----GGCTTTGG-G----TACAGCGTTCCTTGCAATAAA-------ATA-----CG--CATATT------CATCTGCGACGTTTCTGGACTTTCCCGTTGAAAGTTG---GCCAAGGCGAGACAGCGCA-TCAGCGGCGTTCTTAGGTCCT--AG------AATGTAC---ACTAACTTAAACATGTA--TGGCTG-AAGCCT--------AAGTGTCCAGCGTTCGATTCT--AAC---G--GGC--------GGTTTTGATT----TTGGTGAAAATATACCAGTAAGTGGTTTGTGATCTGTC--C--AGAT--------CTCACACTT-AAGC------CCATAAACGTACATGTGGAATCTCTCGCATCTAAAT-ACTACCCCCAGTGCTTCTC------T-C---T---g
gi|6 : ttttccgattgaagagtaattcggctggacttttaccggtcgtggcatgcggagtcgatcgatacgcaagtaaaaatttgggtaattcttttttccagtctcccctcagcgtttgcggctttgatggccttcagtagcgtgcgattttgacttccccgttcccctggggccaatagggtgttgtttgtatgtgtctaactcccgtttattctaaggtattctttgaattcttcggatacgaactgcggaccgttatcacaacgaatgctttgaggaataccgtgtctcacaaacattgcttccatctgtagaattatcctttcactggttatttttttaggatagctacttcttgatatcttgagaagtaatcgacgactaccagaaggttctctcccgagggaaatggtcccgtctcatcaaatcaatagccaaatcttgccacggtccatcgggcattggtgTGATA-TGTAGTCTGCCATGTTCT--CCTTCCCTGG---TGCA-----T---ACT---TT---ATGGTA--AACTTATAGGGTTGGAGACAAA-GTCCCCATCTTTCAATGC----GAAGTGATGGACGC-----GTCTTC--TG-----CCAGATAG--TTTCC----AGCGGCTTGTGATCTGTAA-TGATAGTGGAAGTGGTGCAAGCTG-CTTA------A-ATACAGATCAAAGTG------CTCACAAGCCCAT-GTTATCGCTAAGGCTTCTCGCTCCGT-C---TGACTGTATCTC---GACTCAACTG--------GGGTAAGGGC----------TCT-----------GCTT------GCATAGC--ATAGTAAGCATGCCACTCTG--TCATCGTCTTGAA---GCATAATG---GCTCCCAAACCGACTGGACTTGCGTCTACTC-TAAT--TGTGACTGATTTCTGTGGA-TCccgtctgagaatacagtttctcgacatcagtaagatagcgacaggcttaaatgatccatcattctgtttttggaccagtatagcacccagacctacgggactcgcgtcgactatgactctggttcctgattttgggttgtagtaaacaagtgtttcggcgcttactaatgcacgtttcagctcgtcgaatgcgtcctcttgctgtttggtccatctccagctcacgttcttcttggtcaactcgagcggcgcagctattgtcgaaaaatttgatatgaaccgggcacagtagtttgcaagtccaaggaaactccgcacttccgagctgtttgatggtttacgcgtctcggttactaccttgattttctcttcgtccggccgtattccctctgctgagattatgtgtccgagaaaaacaatttctgatagaccgaacttgcacttttcacggttaagcgtaaaacccttttgcatcaatctatctagtaactttgatagtttttcatcatgattggcctggtcggcgccatacacaacaatgtcgtcagagagatttcgtactcccttcagaccctgaatcacttgaccaatgactctttggtatatttcggacgcagacgaaattccgaacatcagccgtttatagcgatataaaccgtcatgtgttgtgaatgttgtaatttcccttgactcctcgtcaagttcaatttggtgataccccatcgaaggtctagtttcgaaaagactttacttccattcatgtcctctagtatctcgtcaacagttggtatcggatgacgcttccgtcttactgctatctttgcgcgacgcatgtcgacacagattcgaatttcgtcatttttcttcgagactacgacccatgctgacggctcatcaactttttcgatgatgtctttatcctctagctcgtctagcttcttgcgcattgctttcctgacgttgaacggtaaacgccttagaggttgagctactggcataacagcgtcatcaaggtgaattttcaggcgaaagtttttcagtttgcct
gi|3 : C----AGCGGTTTGTGGTCCGTC--C--AGAT--------TTCGAATTC-AAGC------CCATAAACGTATATGTGAAATCTCTCACA-GCCAAAGACTACTCCTAGTGCCCCTCGC----T-CCGTT---TGT--------GAAT-A-TTGTTTCTCGACG-------TCGGTTAGAGATCT-----------GCTT------GCGTA---GGCAAC--GGGTTTAAAC--GATCCGTCCCCCTGTTTTTGTGACATTATAGCTCACAGTCCTACGGGACTCGAATC-AACTATAATATTA-TCC---TTGTTTCGGACTTTCGGTTGTAATAC-ACCAGTGTTT-CAAATCT-TCAAAC---------GCATC------CT--GGTGCCGTTTGGTCCACTTCCAAAC---TGCA---TTCTTTCTAGTCAATTAACGC-AAAGGTGCAGTAATCGTTGAGAAATTCTGTATGAACCGCCCACAATGATTCGCCAGTCCCAGGAAGCTTCGTACTTCAG---CACTATTTGTTGACTTGCGTGTTTCTGACACC------GC---TTTGATCTTCTCG-TCGT-CCGGTCGACTATCACGTGTACG--GGA-AACACGATCCTCGTAAA-GTCA---------------AATTTACATTTTTCACGATTCAAAGT-AAGGCCTT-TCTT--AACCAGTCTA-----T-CA-AGTATTTTGGC--AAACTTTTCATCATGATCTGCCTGGTCTGTT------CCATAGA-CAACAATGTCATCGGAGAGATTC---CGTACTCCT-TCAAGAC--CTTGGATCACTTGACAAATCACTCGCTGATAGATCTATTAGA-GTTGGatgatatgctatgacatcatcactgcacaggctgtccttcaacttaaggaatgctttttcacacctagagtcccaatgccaggatttgtctttgtgagtgagttctctgagaggttgataaatgtcagtatagttctttatgaaacgtgaactgtagtgcgtacttcctcagaatctcctaaagtctttaacgttctgcggcctactgaattcctggattgcgttgaccttttcggggtcgggtgatatgccactgtctgaaaacacaacaccgaaaaatgaaatcctgtttgttctgaattcacatttattacggtttacagtcaggccatgctccctcagcctttcgagtactctatgtagtgcctggtcatgctgcttaaggtctgttccgaaaatcacaatatcatcggatatgtttgtggtacctgtatattcctgaattagctgtcgaatagtttcgtggaatatttctgatgctgacgtataccgaagttgagacgcttgtaacataaatgccaagtgtgtatgaatgtagttataaatctggagttctggtgagtcaagttggtgatttccctgcggtagatccagcttgctgaacaccttgctccgttcaggtccaatataagttcctctatagtaggtagagtgtgttcggctgcttattggcctccctcatatcaacacataagcgaatcttcctccgttcttcttagtgggtcactatgggcgatacccatggattggctcaccatcgcctctcaatgatatccttctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttctgtgctacacgttgtaccgattcatcaatatggattttcacctgacgttcctttcattttcctatcctcggaacagtctggaaactcgtttcaacagtgtc
gi|9 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgtcggttttatcggttcccgttgcacgtgttgtcaccattgacatgtattcatgccttgacaaataattttcaacttctgtgtgccaatactttttcgcgcagccgttgtttgactattccttgatgtccctcatgtgcaagaaattgtatccttcctcatagattttggcataagtattcgggttccgcgtaatacaataccatcaaaaactgaaaattctgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacttcgcgatcctttgatgattccctccaaacttcgtcgattgtgagggcttttggaaccgcattccttgcaatcatctgcaatatgtctcactttgtctgcttcattctgactaagaagtggcaaagcatcagcggcatttttaggtcctggcgtgtatactaggactagcttgaacgtaatggctgtagtcgaagcgtacagcgctcaatccttaccggtggcttcgatttcggcgagaaaatatatgtGTGGTATGTGATC--TG----------TCCAGATTCTCACACTTAAGCCATA-ACGTACATGTGGCAATTCTCTCGCATCTAA-ATTACCCACAGTGCTTCTC------T-C---T---
gi|1 : atttcctagtgaccttcgtttgtgccagaggaaattgtattatcttctaggaagttgccgttcaatttatgcatctgagtatacgatgttcacataacatgtagcacaatgccatcaacgactgacattctgaatgtatcctgcgcaactcgtgtttttgaaaattgttgtctgtcttagatcaccaattatatgatgtctttattcatgatcctttgaggattcctcgcgaatgtgttgaaggcctttgggttacattgcgttacctcctcctaacatacagaataccggcattattctcttctgacatcgtttctggactttcccctagcattagaacagtttcggctcaaggcgagacaagcgcatcagcgtgcgtctctaggtcctagtaatgtacactaaacttcaaacatgtcatggctgaaggcctaagctgtccagcgttcgattctaacgggcggttattgattgtggatagatagtaattatataccatgtaaGTTCTTCTTGGTCAA----CTCGAGCGGCGCAGCTATTGTCGAAAAATTTGATATGAACCGGGCACAGTAGTTTGCAAGTCCAAGGAAACTCCGCACTTCCGAGCTGTTT---GATGGTT--TAC-------GCGTCTCGGTTACTACCTTGATTTTCTC-TTCGTCC-GGCC--GTATTCC-C--TCTGCTGAGATTATGTGTCCGAGAAAAACAATTTCTGAT-AGACCGAACTTGCACTTTTCACGGTTAAGCGTAAAACCCTTTTGCATCAATC--TATC-----TA-GTAACTTTG--AT--AG-TTTTTCATCATGATTGGCCTGGTCGGCG------CCATACA-CAACAATGTCGTCAGAGAGATTT---CGTACTCCCTTCA-GAC--CCTGAATCACTTGACCAATGACTCTTTGGTAT-ATTTC-GGACGCAGACGAAATTCCGAACATCAGCCGTTTATAGCGATATAAACCGTCATGTGTTGTGAATGTTGTAATTTCCCT---TGACTCCTCGTCAAGTTCAATTTGGTGAT-ACCCCATCGA-AGGTCTAGTTTCGAAAAGACTTTACTTCCATTCATGTCCT-CTAGTATCTCGTCAACAGTTGGTATCGGATGACGCTTC-CGTCTTACTGCTAT--CTTTGCGCGAC-GCATGTCGACACAGATTCGAATTT--CGTCATTTTTCTTC-----GAG--ACTACG-------------ACC-CATGC--TGACGGCTCATCAACTTT----TTCGATGATG--TCTTccgtcttgagaatacagtttctcacattcagtaagatagcgacagcttaaatgaattccgatcatgcatctgtgttccttgggaccagtacttagcacccagaacttacgggcaacgcgcgtcgactatgactctggttccttattattggttgtagtaaacaagtgtttcggcgcttactaatgcacgttttcagctcgttcgaatgctcctcccttgctgtttggtccattcatccaagctcacgttcttcttggcaactcgaaagcggacgcagctattgtcgaaaaat
gi|15 : ttttccgattgaagagtaattcggctggacttttaccggtcgtggcatgcggagtcgatcgatacgcaagtaaaaatttgggtaattcttttttccagtctcccctcagcgtttgcggctttgatggccttcagtagcgtgcgattttgacttccccgttcccctggggccaatagggtgttgtttgtatgtgtctaactcccgtttattctaaggtattctttgaattcttcggatacgaactgcggaccgttatcacaacgaatgctttgaggaataccgtgtctcacaaacattgcttccatctgtagaattatcctttcactggttatttttttaggatagctacttcttgatatcttgagaagtaatcgacgactaccagaaggttctctcccgagggaaatggtcccgtctcatcaaatcaatagccaaatcttgccacggtccatcgggcattggtgtcggttttactggttttggcttgcaggtgtctgtcagtagatgacactgactacacgctttgacaaatatctctgcctccgtgtccattcctggccaccataccttttctctcagtcgctgtttcgtacgtacaattccctagtgaccttcgtgtgccagagaaattgtattttttctaagaagttttggcatcataatacgagttccacatacatgtagcacaatgccatcaacgactgacaattctgaatgtatcctgcgcaactccgtgttttgaaaattgttgtctgtcttgatcccatttatgatgtctgttatttcatgatcctttgaggattcctcgcgaatgtcgtgaaggctttgggtacagcgttccttgcaataaaatacgcatattcatctgcgacgtttctggactttcccgttgaaagttggccaaggcgagacagcgcatcagcggcgttcttaggtcctagaatgtacactaacttaaacatgtatggctgaagcctaagtgtccagcgttcgattctaacgggcggttttgattttggtgaaaatataccagtaagtggtttgtgatctgtccagatctcacacttaagcccataaacgtacatgtggaatctctcgcatctaaatactacccccagtgcttctctctccgtctgagaatacagtttctcgacatcagtaagatagcgacaggcttaaatgatccatcattctgtttttggaccagtatagcacccagacctacgggactcgcgtcgactatgactctggttcctgattttgggttgtagtaaacaagtgtttcggcgcttactaatgcacgtttcagctcgtcgaatgcgtcctcttgctgtttggtccatctccagctcacTATCT-CAGTCTTCCGGAATTCACACTTGTCACGGTTCAGTTT-CAGTCC-TG------AATC---CTGGATTCTGCGGAACACT---GTCAAG-CCTGTCATCATGCTCCT-------TACGGGTTTTCCATGAATCAA-GATATCATC---AATGATAACCTCTACTCCC-T--CGATTCCATGTAGTAATTCTGtatcctctagctcgtctagcttcttgcgcattgctttcctgacgttgaacggtaaacgccttagaggttgagctactggcataacagcgtcatcaaggtgaattttcaggcgaaagtttttcagtttgcct
gi|6 : TCAAGTTGGTGATTTCC-CTGCGGTAGATCCAGCTTGCTGAACACCTTGCTCC-GTTCAGGTC-CAATATAAGTTCCTCTATAGTAGG--TAGAGTG-TGTT---CG-------GCTGCTTATTGGCCTC-CCTCATATCAACACATAAGCGAATCTTCCTCCG-TT--CTTCTTAGTGGGTCACTA-------TGGGCGATACC-CATGGATTGGCTCACCATCGCC--T----CTCAATGATA--TCCTtcatctt
gi|8 : tgatatgtagtctgccatgttctccttccctggtgcatactttatggtaaacttatagggttggagacaaagtccccatctttcaatgcgaagtgatggacgcgtcttctgccagatagtttccagcggcttgtgatctgtaatgatagtggaagtggtgcaagctgcttaaatacagatcaaagtgctcacaagcccatgttatcgctaaggcttctcgctccgtctgactgtatctcgactcaactggggtaagggctctgcttgcatagcatagtaagcatgccactctgtcatcgtcttgaagcataatggctcccaaaccgactggacttgcgtctactctaattgtgactgatttctgtggatcatgatatgctatgacatcatcactgcacaggctgtccttcaacttaaggaatgctttttcacacctagagtcccaatgccaggatttgtctttgtgagtgagttctctgagaggttgataaatgtcagtatagttctttatgaaacgtgaactgtagtgcgtacttcctcagaatctcctaaagtctttaacgttctgcggcctactgaattcctggattgcgttgaccttttcggggtcgggtgatatgccactgtctgaaaacacaacaccgaaaaatgaaatcctgtttgttctgaattcacatttattacggtttacagtcaggccatgctccctcagcctttcgagtactctatgtagtgcctggtcatgctgcttaaggtctgttccgaaaatcacaatatcatcggatatgtttgtggtacctgtatattcctgaattagctgtcgaatagtttcgtggaatatttctgatgctgacgtataccgaagttgagacgcttgtaacataaatgccaagtgtgtatgaatgtagttataaatctggagttctggtgagACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTG---TTTGTCAATATGTA-----GC-TTCAACTTA--AAAG-TCTTT-----------------CA-ATTT-CCA--------------ATTCAG---GAA-ATTCTTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCCtctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttctgtgctacacgttgtaccgattcatcaatatggattttcacctgacgttcctttcattttcctatcctcggaacagtctggaaactcgtttcaacagtgtc
gi|5 : ACGATGACTGGACTA-ACCTCATGG--TGTTTGATCATCGACTTTTCGGCTCGATAATGCTTCCTGAGATTTCCAGTTCCCTCAGTGCTAATAAAGGAAATTCGGTATGATTTGGCTTTGCGCTTGAAGGCAAGTTCTACTTGTTCTTTGTCAATA-ATAGATAGGCATTCACTTTAGTAAAGTTCTTTTTCTATATTTTTTTTGCCATATTTCTCATCTCAAAACACCTTATACAGATAGAAAATTATTGAATCAATGCCGTCCAGCCCTACGATTCTGTTTACAAGTATTAATCTCTTCAAGCTTC--AACACCCTAAAGGTCGCCATTGCGGGGTTATTCTTTCGCCCaacaatgctggtccttttccgttcaacacatagaatttccgcttcattccagtatagaaatctgtgttggaatttaccctagcaagcctaatgtgtcagtggcaccatacgcatacagtttcttgacatatttttgtgaatggctttcaaatgtttctttttcaactcgtccactattttttgtcaattatattcactgacgcacccatgtcaatgatgaaatcaacatgatgacctccaatactgacccgagtttccagatacatcaacactaacgcacacacatcatcagattcagaatctaacatctggactttccctcgtttgtcaaatttccgtttatttgatttgggtttcgtcatacaagtgatacaacacttcatgaaatatcctatctgaccacactttctacagttctgatcccttacaggacatgaaagatcccttgcaaagtgcccttgtttcccacagcgataacactttttaacatatttctcattctcacctttgcgtttttgtttcccattgttgccatgaattctgtttcctgacggtgctgtttctgtatccatgtgttttgcttgaacttctgtcatctctacagtagtctagacactatagttcgtaactgttctaattttaagtcctcccctctctcgagtaacttagcccgaattctgtgagacctacacttttcaataatttgatcccgaatttgttcatcttggtttgcgaagtcacagtacactgcttgctgtctcagtcttatcaaaaactgttctactgtttctttgtcggtttgtgtaattttccggaacactaacgctcatatggaacattcattttattctcaaaatatttgttcagcgttttcacagtcactgtatacacggtgtcatcctgtacactctgaacttcatttaacgtgtaataaatgtctt
8 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|10 ): CAATTCTAAGCGGAGGTTTGGGGCGTTTCCAAATGCCAAGTAAAGGTTTATGATCGGTGACCACACGGAAGTGAGGCGCACCTCTCAGGTACATATCAAAATGTTCGCAAGCCCAGATAATAGCTAACGCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGTAGCGCGATTCTGGTCCGCTGAGTGATAGGCTTGCACAAGCAACAACTTTGCTCTCTTGCGTCAGTATAGCCCCTAAGCCAACAGGGCTGGCGTCAACCACAACTTCGATAGGTTTGTTCGGGTTGTAATATGAAATTACGATATCGCTGGACAAGGTTTTGAGTTTTTCAAACCCACTTTCCTGCTCAGATGCCCATTGCCAATCGGTATCCGAACGTGTTAGACGGCGAAGCGGTTCGCTCACAGTGGAATAGTCAGGTATTAACCTGGAGCAGTATGCGGTCATTCCCAGGAAGCTCCTGATTTCACTCGCATTGGAGGGACGTTGCACGTCTTGAATAGCGGACATTTTCTCGGGGTACGGCGAGATACCAGCTTTACTGAACACTATTCCAAAGAAGGTGATTCGGTCAGAGTTGAATTCACATTTGAACGGTTCAGCATTAGTCCAT
Unaligned ( gi|12 ): ATTAATTCTGTTCACTGACGGCGCTTTTTCTGTATCCATGTGCTTTGCATGAACGTCTGTCATTTGTACAGTAGGCGCTATGGTTCGTAACTGTTCTTATGATAAGTCCCTAACTTTCTCGAGTAACTTAGCCCTAACTTAATGAGACCAACAATTTTTCCCCCAATTTTTGCAAAGTCACAGTAAAACTGCTTGCTGTCTCATTCTTGTCTAAAATTGTTCTAAAGTTTCTCTCTCATTTTGAGTAATTTTCAAAATACATATATAATTGCTCATACGGAACATTCACTTTATTCGCAAAATATTTATTCAGTGTTTTCACAATCACTGTGTACACGGTGTTAACCCGTACGCTCTGAACTTCATTTAACGTATTGTAAACGTCT
Unaligned ( gi|13 ): TTTCGATTTGAAGAGTAATTCGGGCTGGACTTTTACCGGTCGTGGCTGGGAGTCGATCGATACGCAAGTAAAAATCTTGGGTTCCACCAGCGTGTATTCTTTTTTCCAGTCTCCCCTCAGCGTTTGGCTGTGCACTTTGAAGTAGAGCTTCAGATAATCGGAGATACAGATTTGGATGCTTTTGATGTCCCACATGGGGCCCTGGCTAGAGGGTGTTGTTTGTATTGTCTACTCCCGTTTATTCTAAGGTATTTTTGGAATTCTTCGGATACGAAACTTGCGGACCGTTATCA
Unaligned ( gi|14 ): AACATCTGAACATTCCCTCGCTTGTCAAATGTCCGTTTAGCTGATTTGGGCTTCGATATGCAACATTAACACTTCATGAAATGTCCTATCTGGTCATAGCTTTCTACAATTCTGATCCATGACTAGACATGAAAGATCCAAAGTGTCCTTATTTCCCACATCGACAACATTTTTACATTCTCACCTTTGCGTTTAGATTCCCCATTGTTTCCATGAC
Unaligned ( gi|16 ): TGTTTGATCCCATTTGTACGAGTAAATCTCTTGAATTCCTCTGAAGTGAACTGAGGTCCGTTGTCGCTGACCATAACACTAGGAACTCCATTCCTTGCAAATATGTTTCTAAGGACTTCAATAGTTTTG
Unaligned ( gi|17 ): TTGAGACGCTTGTAACAATAAATGCCAAGTGTGTACTGAATGTAGTTATAAATCTGGAGTTTGGGTGAAGCTCAAGTTGGTGATATCCCCTGCGTAGATCCA
Unaligned ( gi|18 ): ATTCTCACCTTTGCGTTTTTGTTTCCCATTGTTGCCATGAATTCTGTTTACTGACGGTGCTGTTTCTGTATCCATGTGTTTTGCTTGAACTTCTGTCATCTC
Unaligned ( gi|19 ): CTGGGTGACCTTCGTGAGCTAATTCCAAAACGTGTGTTCGCAATTCAGTCGGAATAACAATTCGGGTCCCTCGGAGAATTAGTTTTCCAATGCAACACAATT
Alignments
lowQualScore : 1111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111
lowQualScore : 111111111 111 111 222222222 1 3333333 11111 222222222 111111111 11 11 22222 11 1111 2222 2222 222222222222222 33333333 111111 111111 3333333333333333333333333333333333333333333 222222222222 0000000000000000000000000000000000 111 1 111 444444444 333333333333333333 44444444444444444444444444444444444444444444444 1111 333333333333333333333 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 2222 111111 222222222222222 1111111111 111 22222222222222222 111 111111 11 11111 1111 4444444444444444444444 111 333333333333333 666666666666666 111 1 111 111 11 11111 555555555555555555555555555555 2222 1111 11 1111111111 111 1 11111111111111111 11111111 3333333333333333333333333333333 111111111 3333 1 444444 99999999999999999999999999 33333 33333333 2222 3333 1 2 11 1 2 666666666 11 11111 11 444 22222 11 1111 2 2 2 2 33 333333333 4444444 333 55555555 33 555555555555555555555 1 55555555555555 2222 2 0000000000000 333 4444 44444444
lowQualScore : 6 6 1 1 666666666 6 111 666 4 1 777777777 1 9999 6 1 3 33 3 2 0 88 1 4 0 1 0 5555555 1 99999 22222 666666666 4 444444444 1 2 0 5 0 1 55 1 0 11 99 8 3 00000 8 11 7777 0 88 33 777 8 8 8 0 5 8 2222 0 1111 2 3 111111111111111 99 11111111 1 6 666666 999999 4 7777777777777777777777777777777777777777777 666666666666 4444444444444444444444444444444444 1 6 1 5 5 7 444 4 5 7 0 3 999999 1 0 1 000 777777777 55 5 77 1 6666 888888888888888888 4 1 2 5 66666666666666666666666666666666666666666666666 2222 666666666666666666666 3 6 6 3 1 888 88 66 11 1 5 5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 0 1 5 3333 888888 5 777777777777777 2 1 8888888888 77 1 3 55 111 1 66 7 0 99 6 1 77777777777777777 000 6 111111 3 99 2 3 4 8888 666 88888 3333 7 4444444444444444444444 1 3 999 7 99 1 666666666666666 1 555555555555555 44 333 1 2 22 6 1 1 1 6 1 5 444 999 22 55555 333333333333333333333333333333 0 5555 1111 11 4444444444 111 6 8 6 999 88888888888888888 1 2 1 1 1 1 88 3 77777777 8888888888888888888888888888888 1 1 111111111 7 0000 6 3 1 77 3 8 1 1 22 8 0 99 0 8 1 44 1 111111 22222222222222222222222222 1 1 55555 1 11111111 6 9999 3 0 1111 6 99 8 1 22 1 1 44 22 0 1 4 3 33 0 2 3 0 999999999 4 33 0 55555 6 1 2 1 33 4 2 555 55555 33 3 6 6 99 7 4444 7 99 3 3 3 3 00 444444444 9999999 0 777 7 44444444 1 00 7 777777777777777777777 5 22222222222222 1 4444 1 1 3 0 0 0 0 6666666666666 777 7 3333 00000000
lowQualScore : . . . . ......... . ... ... . . ......... . .... . . . .. . . . .. . . . . . ....... . ..... ..... ......... . ......... . . . . . . .. . . .. .. . . ..... . .. .... . .. .. ... . . . . . . .... . .... . . ............... .. ........ . . ...... ...... . ........................................... ............ .................................. . . . . . . ... . . . . . ...... . . . ... ......... .. . .. . .... .................. . . . . ............................................... .... ..................... . . . . . ... .. .. .. . . ........................................................................................... . . . .... ...... . ............... . . .......... .. . . .. ... . .. . . .. . . ................. ... . ...... . .. . . . .... ... ..... .... . ...................... . . ... . .. . ............... . ............... .. ... . . .. . . . . . . . ... ... .. ..... .............................. . .... .... .. .......... ... . . . ... ................. . . . . . . .. . ........ ............................... . . ......... . .... . . . .. . . . . .. . . .. . . . .. . ...... .......................... . . ..... . ........ . .... . . .... . .. . . .. . . .. .. . . . . .. . . . . ......... . .. . ..... . . . . .. . . ... ..... .. . . . .. . .... . .. . . . . .. ......... ....... . ... . ........ . .. . ..................... . .............. . .... . . . . . . . ............. ... . .... ........
lowQualScore : 7 7 0 0 888888888 7 777 000 8 0 555555555 0 3333 7 0 3 77 7 2 8 33 0 0 7 0 6 7777777 4 33333 44444 666666666 3 999999999 0 1 6 0 6 7 77 0 8 00 00 0 2 00000 0 00 0000 8 88 66 000 0 0 0 8 0 0 4444 7 4444 7 0 888888888888888 22 22222222 0 7 222222 222222 3 8888888888888888888888888888888888888888888 333333333333 3333333333333333333333333333333333 7 7 1 7 7 6 666 0 7 1 7 3 777777 4 7 9 000 111111111 77 7 99 0 0000 777777777777777777 3 3 7 2 55555555555555555555555555555555555555555555555 1111 777777777777777777777 0 6 6 0 0 000 33 77 11 0 7 3333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 7 0 7 7777 999999 7 000000000000000 7 0 7777777777 99 0 0 33 999 9 77 6 4 22 7 0 00000000000000000 222 7 333333 3 22 5 7 2 2222 888 77777 0000 3 5555555555555555555555 0 3 777 3 22 7 555555555555555 0 555555555555555 77 555 0 0 55 7 4 4 4 6 4 0 000 888 66 00000 222222222222222222222222222222 8 6666 8888 00 6666666666 666 0 0 0 444 44444444444444444 0 2 0 0 0 0 22 5 77777777 3333333333333333333333333333333 5 0 333333333 3 2222 7 7 0 33 3 2 0 0 00 0 8 44 8 0 4 22 0 888888 00000000000000000000000000 0 0 00000 0 66666666 4 6666 2 6 2222 0 00 0 0 00 0 0 55 88 0 0 2 0 22 0 5 2 0 888888888 0 88 2 22222 5 0 5 0 88 2 0 000 00000 88 2 7 7 22 3 2222 3 22 7 7 3 7 33 777777777 3333333 7 333 3 77777777 0 33 3 333333333333333333333 5 00000000000000 0 0000 0 0 3 7 7 7 7 3333333333333 333 3 7777 33333333
consensus : TAATGTTCT-CG-GTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCAC--TA-----TCCGCGNTCCACGTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTACGAA--TCTA-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---T--TTCTG-----TCTCC-------AGA-TG---G-CTT-GTCTACCAAGACGTGACA-GCGCA-TCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------TTGAANNTGT-A--TNGCCGTAAGNTT-----CAAAA-GT-CCCATCGTTCGATTCTCGCA-CG--GGNCGN-GACTTC--TT----TC--CGTAC-AAACT---T-CCAGC----GGCTTGTGGTCTGTCACNGA-T-----------T-TCAAACTCNACACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TC------TC---T---TGTAG-TCT---GAAT-A-A----CT-G--------CG-------T----------TCT-----------------GCTNGC-GTAA-C-GATAGC----N-CGAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCTCCCAG-ACCNACGGG--ACTCGCGTC-GACCATAA--T--T--G-GGCT---TTCTTCGGA-TC-TCGG-TTGTAATGNTACNAGCGTTTTCGCGTTTAC-CAA-GCA-GTTCTTCAGCATC--TCGAA----N----CTTCGNTGCTGTTCGGTCCACCC--CCAAA---C-AATGC-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCAGCNATNGTCGANA-AATTCGGTATGAACCGCGCACTATAGTTCGCAAGTCCCAGGAAACTTCTCA---CTTCAGAAGC-GCTA---GTTGGCT--CAT-----TGGCATCC--GGTTGCGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTAT--CGC-CGTTCT--TGACAAC-ACGTGCCCC-GTAAATGTTA--TCTC-GTTCATCCCGAACTCGCACTTGTCACGGTTNAGAGTCAG-TCCTTG-TCTT--TCAATCTCT---G-----TACGCAACACT---G-C--AGCCTTTCATCATGNTCTNC-CT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCCT-CACGATCNTGAATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAAC-TCAGACGTTTGTAAC-ATATAAATCGTCAAGTGTGTAC-GAATGTAGTTATAAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAAT-CCACTN-CGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATA--ATCGCNGC--ATTCGCT-CG-CTCATATCNACACACAATCNAATNT--CGCCATCGG-CTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTG---TTTGTCAATATGTA-----GC-TTCAACTTA--AAAGTTCTT---TTTCCA-ATTTTTTTTGCCATATTTCCCATCTCAAAACACCTTATNCAGATAGGAAATTCTTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
Reference ( family-2956 ) : TAATGTTCT-TG-GTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCACGACATGNTTTC--------GCANA-T--TTCTC-CACNTCTTTGTCCATNCCTGGCCACCAAACTTTATTTCTCAACCGCTGCTTCGTACCNACNATTCCCGAGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCAC--TA-----TCCNCGATCCACGTAACACTAAATACCCTACACAAC--ANAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCGTCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGAAGCTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCNTT-GGG-G----TTGC------TTCCCTTGCTATAAA--CCTA-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---T--TTCTG-----TCTCC-------AGA-TG---G-CTT-GCCTACCAAGACGTGATA-GCGCA-TCCGCN--ATGT-TCT-ACGTTCC-GGTGCAATGTAC---ACT---------TTAAAANTGT-A--TNGTCATAAGNTT-----CAAAA-GT-CCCATCGTTCGATTCTCGCA-TG--GGNCGA-GACTTC--TT----TC--CATAC-AAANT---T-CCAGC----GGTTTGTGGTCTGTNACTGA-T-----------T-TCAAACTCCACACCATANACGTANATGTG--AAATCTCTCACACGCCCAN-ACTACCGCTAGNGCTTC-TC------TC---T---TGTAG-TC----GAAT-A-A----CT-G--------CG-------T----------TCT-----------------GCTNGC-GTAA-C-GATAGC----N-CGAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNAGCAACAC--GGCTCCCAG-NCCGACGGG--ACTCGCGTC-ANTCATAA--T--T--G-GNCT---TTCTTCGGA-TC-TCGN-TTGNAATGCTACCAGCGTTTTCANATCTAT-CAA-ACA-GTTCTTTAGCATC--TCAAA----A----CTTCGNTNCCGTTCGGTCCACCC--CCAAA---CGAATGC-AGA-GTTCTTCTTNGTCAA-C--G----CTC---ANCGG-TGCAGCNATCGTCGANA-AATTCGGTATGAACCGCGCACAATAGTTCGCAAGTCCCAGGAAACTTCGCA---CTTCAG-AGC-GCTA---GTTGGCT--CGT-----TGGCGTC---GGTTGC-AT-TTGATTTTCTCGC--TCGT-C-GGTC--CTAT--CGC-CGTTCT--TGA-AAC-ACGTGCCCC-GTAAA-GTTA--TCTC-GNTCATCCCGAACTCGCACTTNTCACGGTTNAGNGTNAG-TCCTTG-TCTT--TCAATCTCT---G-----TACGNAACACT---G-C--AGCCTTTCATCATGNTCCGC-CT--GGTCTGCGGCCATGAA-CAACGATGTCATCGGAGANGTTNCGTACTCCCT-CACGACCNTGAANCACTTGNNAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGANATNCCGAACATCAGCCGTTTGTAGCGATATAAACCGTCATGTGT-TGC-GAANGTNGN----ANTCTCCCTCGATGACTCCTCGTCAAGCTCAATTTGGTGAT-A--CC-CTN-CGG-AGGTCNAGTTTNNTGAANACCTTNCTCCCGTTCACGTC-TANTAGAATTTCGTCTACAGTAGG-ATAGGATG-CGTTTC-CG--T---ACCGCTGC--ATTCGCN-CG-CTCATATCGACACANAATCGAATNT--CGCCGTT---CTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGATTTCCAGTTCCCTCAGTGCTAATAAAGGGAATTCGGTACGATCTGGCTTTGCGCTTGAAGGCAAGTTCCACTTGTTCTTTGTCAATATGTAGATAGGCATTCANCTTAGTAAAGTTCTT---TTTCTATATTTTTTTTGCCATATTTCCCATCTCAAAACACCTTATNCAGATAGAAAATTNTTGAATCAATGCCGCCCAGCCGTACGATTCTGTTTACAAGTATTAATCTCTCCAAGCTTCAAAACACCCTAAAGGTCGCCATTGCGGGGTTATTCCTTCGCCC
gi|1 : T-CG-GTTTTACTGGTTTTGGCTT----GCAG-GTGTCTGTCAGTAG-ATGACACTGACTACACGCTTTG--------ACAAA-T--ATCTC-TGCCTCCGTGTCCATTCCTGGCCACCATACCTTTTCTCTCAGTCGCTGTTTCGTACGTACAATTCCCTAGTGACCTTCGTGTGCCAG--AGAAATTGTA-----TTTTTTC-TAAGAAGTTT----TG---GCA-TCATAATACGAGTTCCAC-ATACATGTAGCAC--AATGCCATCAACGACTGACAATTC--TGAATG-TAT-CCTGCGCAAC-----TCCGT--GTTTTGAAAATTG-TT--GTCTGT----CTTGATCCCAT-TTATGATGTCTG--TTA-TTTCA---TGATCCTTT---GAGGATTC-----------CTCGCGAATGTCGTG----AA-GGCTTT-GGGTA----CAGC------GTTCCTTGCAATAAA--------A-TA------CG--CAT----ATT------CA--TCTG----CGACGT--TTCTGGAC--TTTCC-------CGT-TGAAAG--TT-G---GCCAAGGCGAGACA-GCGCA-TCAGCG--GCGT-TCTTAGGTCCT-AG---AATGTAC---ACTAAC------TTAAACATGT-A--TGGCTG-AAGCCT--------AA-GTGTCCAGCGTTCGATTCTAAC------GGGCGG---TTTTGATT----TT--GGTGA-AAATA---TACCAGTAAGTGGTTTGTGATCTGTC-CAGA-T-----------C-TCACACTTAAGCCCATAAACGTACATGTG--GAATCTCTCGCATCTAAAT-ACTACCCCCAGTGCTTC-TC------TC---T---CC--G-TCTGA-GAAT-A------CA-G--------T--------T----------TCTC----------------GACATCAGTAA---GATAGC----GACAGGCTTA-AATGATCC--A-----TCATTCTGTTT------TT--GGACCAGTAT--AGCACCCAG-ACCTACGGG--ACTCGCGTC-GACTATGA--C--TCTG-G------TTCCT--GA-TT-TTGGGTTGTAGTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT--TCAGC-TCG-TCGAA----TGCGTCCTC-TTGCTGTTTGGTCCATCT--CCA----------GC-TCACGTTCTTCTTGGTCAA-C--------TCG--AGCGG-CGCAGCTATTGTCGAAA-AATTTGATATGAACCGGGCACAGTAGTTTGCAAGTCCAAGGAAACTCCGCA---CTTCCG-AGCTGTTT---GATGGTT--TAC-------GCGTCTC-GGTTACTACCTTGATTTTCTC-T--TCGT-CCGGCC--GTAT--TCC-C--TCTGCTGA-GATTATGTGTCCGAGAAAA-ACAA--TTTCTGAT-AGACCGAACTTGCACTTTTCACGGTTAAGCGTAAAACCCTTT-TGCA--TCAATCTAT---C-----TA-GTAACTTT---GAT--AGTTTTTCATCATGATTGGC-CT--GGTCGGCG-CCATACA-CAACAATGTCGTCAGAGAGATTTCGTACTCCCTTCA-GACCCTGAATCACTTGACCAATGACT-CTTTGGTAT-ATTTC-GGACGCAGACGAAATTCCGAACATCAGCCGTTTATAGCGATATAAACCGTCATGTGT-TGT-GAATGTTGT----AATTTCCCT---TGACTCCTCGTCAAGTTCAATTTGGTGAT-A--CC-CCATCGA-AGGTCTAGTTTCGAAAAGACTTTACTTCCATTCATGTC-CTCTAGTATCTCGTCAACAGTTGGTATCGGATGACGCTTC-CG--TCTTACTGCTAT--CTTTGCG-CGACGCATGTCGACACAGATTCGAATTT--CGTCATTTTTCTTC-----GAG--ACTACGA-------------CC-CATGC--TGACGGCTCATCAACTTT----TTCGATGATG--TCTT
gi|11 : ttttccgattgaagagtaattcggctggacttttaccggtcgtggcatgcggagtcgatcgatacgcaagtaaaaatttgggtaattcttttttccagtctcccctcagcgtttgcggctttgatggccttcagtagcgtgcgattttgacttccccgttcccctggggccaatagggtgttgtttgtatgtgtctaactcccgtttattctaaggtattctttgaattcttcggatacgaactgcggaccgttatcacaacgaatgctttgaggaataccgtgtctcacaaacattgcttccatctgtagaattatcctttcactggttatttttttaggatagctacttcttgatatcttgagaagtaatcgacgactaccagaaggttctctcccgagggaaatggtcccgtctcatcaaatcaatagccaaatcttgccacggtccatcgggcattggtgTAATGTTGT-TG-GTTTGATAGGTTCTGGTTT--TGGAAATGCG-CT---GGTAATCTGACATCCATGACATAATTTC--------ACATA-T--TTCTC-CACGTCTTTGTCCATACCTGGCCACCAAACTTTATTTCTCAACTGCTGCGTAGTACCCACTAATCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCAC--TA-----TCCTCGATCCACGTAACACTAAATATCCTACACAAC--AAAATTCATTA--CGTAAT-GGTAAATAAT-----TAC-T--AT----AGGATTGATCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-AATTGGACAA-GTTCC---TCATCCTTCCTAGAAGCTtatcctctagctcgtctagcttcttgcgcattgctttcctgacgttgaacggtaaacgccttagaggttgagctactggcataacagcgtcatcaaggtgaattttcaggcgaaagtttttcagtttgcct
gi|15 : ataacgactgaaatagtccaccaacaacaacatattgcctgtagtgttaacggccaagcagatctatcgctaaatcttgccgcaatccagttggTA--TCTC-AGTCTTCCGGAATTCACACTTGTCACGGTTCAGTTTCAG-TCC-TG---------AATC-CT---GGATTCTGCGGAACACT---G-TCAAGCCTGTCATCATGCTCCTTACG--GGTTT---TCCATGAATCAA-GATATCATCAATGATAACCTCTACTCCCT-C
gi|17 : AGACGCTTGTAACAATA--AAT-GCCAAGTGTGTACTGAATGTAGTTATAAATCT-----G--GAGTTTGGGTGAAGCTCAAGTTGGTGAT-ATCCC-CTG-CGT-AGATCCAgattccatgtagtaattctgtcatctt
gi|19 : ttgCTGGGTGACCTTCGTGAGCTAA--T----TCCAAAACG-TGTGTTCGCAA-----TT----CAGTCGGAATAAC--AA-----TTCGGGTCCCTCGGAGAATTAGTTTTCCAATGCAAC--ACAATT
gi|2 : TAATGTTCT-TG-GTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCAC--TA-----TCCTCGATTCACGTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTATGAATTTTTA-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---T--TTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCTACCAA-ACGTGATA-GCGCA-TCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------TTGAAATTGT-A--TTGTCATAAGTTT-----CAAAA-G---CCATCGTTCAATTCTCGCATTG--GGTCGA-GACTTC--TT----TC--CATACAAAACT---T-CCAAT----GGCTTGTGGTATGTCACTAA-T-----------T-TCAAACTCCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTC-TT------TC---T---TGTAG-TC----GAAT-A-A----TT-G--------CG-------T----------TCT-----------------GCTAGC-GTAA-CTGATAGC----T-CGAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAG-ACCAACATT--ACTTGCATC-AGTCACAA--T--T--G-GGCT---TTCTTCGCA-TC-TAAC-TTGAAATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTAGCATC--TCAAA----A----CTTCGCTTCTGTTC--TTC-CCC--CCAAA---CGAATGT-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATCTCGCACTAAAGTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAAC-ACTA---GTTGGCT--CAT-----TGGCATCA--AGTTGCGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTAT--TGC-CATTCT--TGACAAC-ACGTGCCCC-TTGAATGTTA--TCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGTCAG-TCCTTG-TCTT--TCAATCTCT---G-----TACACAACAC----G-C--AGCCGTTCATCATGTTCTTC-TT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCCT-CACAATCATGAAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAAC--C-----TTTGTA-----------CGTCA--------C-AAAAGTAGG----ATTCTCCCTCGATGATTCCTC-T--AACTCAATCTGGTGGTAA--CCACTC-CTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATA--ATCGCAGC--ATTCGCT-TG-CTCATATCCACACACAATCTAATGT--CACCATCGG-CTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTG---TTTGTCAATATGTA-----GC-TTCAACTTA--AAAG-TCTT---T-----------------CA-ATTTCCCA--------------ATTC----AGGAAATTCTTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|3 : T-CG-GTTTTATCGGTTCCCGTT----------GCA-CG---TGT----TGTCACCATTGACATGTATTCATGCCTTGACAAA-TAATTTTC-AACTTCTGTGT---------GCCA--ATACTTTTTCGCGCAGCCGTTGTTT------GACTATTCCTTGATGTCCCTCATGTGCAAGAAA----TTGTAT---CCTTCCTCATAG--ATTTT---------GGCATAAG--TA-----TTCGGGTTCCGCGTAATAC--AATACCATCAAAAACTGAAAATTC
gi|3 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgTTCG---CGATCCTTT---GATGATTCCCTCC---AAACT-TCG--T--CGATTGTGAG-GGCTTTTGGA-A----CCGC------ATTCCTTGCAATCA---TCTG-CAATATGTC---T--CAC-----TT------TG--TCTG----CT---TCATTCTG------------------------------------ACTAAGAAGTGGCA-AAGCA-TCAGCGGCAT-T-TTT-AGGTCCT-GGCG---TGTAT---ACTAGGACTAGCTTGAACGTA--A--TGGCTGTAG---T-----CGAAGCGT-AC-AGCGCTCAATCCTTACC-----GGT----GGCTTCGATT----TCGGCG-AG-AAAATATATGTCAGC----GGTTTGTGGTCCGTC-CAGA-T-----------T-TCGAATTCAAGCCCATAAACGTATATGTG--AAATCTCTCACA-GCCAAAGACTACTCCTAGTGCCCC-TCGC----TCCGTT---TGT---------GAAT-A------TT-GTTTCTCGACG-------TCGGTTAGAGATCT-----------------GCTTGC-GTA----GGCA------A-CGGGTTTA-A-----AC--GAT---CCGTCCC---CCTGTTTTT--GTGACATTAT--AGCTCACAG-TCCTACGGG--ACTCGAATC-AACTATAA--TATT--A-TCCT---TGTTTCGGACTT-TCGG-TTGTAATAC-ACCAGTGTTT-CAAATCT-T-CAA-AC----------GCATC----------------CT--GGTGCCGTTTGGTCCACTT--CCAAA---C---TGC-A----TTCTTTCTAGTCAA-TTAA----CGC---AAAGG-TGCAGTAATCGTTGAGA-AATTCTGTATGAACCGCCCACAATGATTCGCCAGTCCCAGGAAGCTTCGTA---CTTC---AGC-ACTATTTGTTGACTTGCGTGTTTCTGACACC-------GC--T-TTGATCTTCTCG---TCGTCC-GGTCGACTAT--CACGTGTACG--GGA-AAC-ACGATCCTC-GTAAA-GT-----------------CAAATTTACATTTTTCACGATTCAAAGTAAG-GCCTT--TCTTAACCAGTC------------TATCAAGTATTTTGG-CA-AACTTTTCATCATGATCTGC-CT--GGTCTGT-TCCATAGA-CAACAATGTCATCGGAGAGATTCCGTACTCCTT-CAAGACCTTGGATCACTTGACAAATCACT-CGCTGATAGATCTATTAGA-GTTGGtgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacttcgcgatcctttgatgattccctccaaacttcgtcgattgtgagggcttttggaaccgcattccttgcaatcatctgcaatatgtctcactttgtctgcttcattctgactaagaagtggcaaagcatcagcggcatttttaggtcctggcgtgtatactaggactagcttgaacgtaatggctgtagtcgaagcgtacagcgctcaatccttaccggtggcttcgatttcggcgagaaaatatatgtcagcggtttgtggtccgtccagatttcgaattcaagcccataaacgtatatgtgaaatctctcacagccaaagactactcctagtgcccctcgctccgtttgtgaatattgtttctcgacgtcggttagagatctgcttgcgtaggcaacgggtttaaacgatccgtccccctgtttttgtgacattatagctcacagtcctacgggactcgaatcaactataatattatccttgtttcggactttcggttgtaatacaccagtgtttcaaatcttcaaacgcatcctggtgccgtttggtccacttccaaactgcattctttctagtcaattaacgcaaaggtgcagtaatcgttgagaaattctgtatgaaccgcccacaatgattcgccagtcccaggaagcttcgtacttcagcactatttgttgacttgcgtgtttctgacaccgctttgatcttctcgtcgtccggtcgactatcacgtgtacgggaaacacgatcctcgtaaagtcaaatttacatttttcacgattcaaagtaaggcctttcttaaccagtctatcaagtattttggcaaacttttcatcatgatctgcctggtctgttccatagacaacaatgtcatcggagagattccgtactccttcaagaccttggatcacttgacaaatcactcgctgatagatctattagagttgg
gi|4 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgtcggttttatcggttcccgttgcacgtgttgtcaccattgacatgtattcatgccttgacaaataattttcaacttctgtgtgccaatactttttcgcgcagccgttgtttgactattccttgatgtccctcatgtgcaagaaattgtatccttcctcatagattttggcataagtattcgggttccgcgtaatacaataccatcaaaaactgaaaattctgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacTAATGTTCT-TG-GTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCAC--TA-----TCCTCGATTCACGTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTATGAATTTTTA-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---T--TTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCTACCAA-ACGTGATA-GCGCA-TCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------TTGAAATTGT-A--TTGTCATAAGTTT-----CAAAA-G---CCATCGTTCAATTCTCGCATTG--GGTCGA-GACTTC--TT----TC--CATACAAAACT---T-CCAAT----GGCTTGTGGTATGTCACTAA-T-----------T-TCAAACTCCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTCTTT------TC---T---TGTAG-TC----GAAT-A-A----TT-G--------CG-------T----------TCT-----------------GCTAGC-GTAA-CTGATAGC----T-CGAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAG-ACCAACATT--ACTTGCATC-AGTCACAA--T--T--G-GGCT---TTCTTCGCA-TC-TAAC-TTGAAATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTAGCATC--TCAAA----A----CTTCGCTTCTGTTC--TTC-CCC--CCAAA---CGAATGT-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATCTCGCACTAAAGTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAAC-ACTA---GTTGGCT--CAT-----TGGCATCA--AGTTGCGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTAT--TGC-CATTCT--TGACAAC-ACGTGCCCC-TTGAATGTTA--TCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGTCAG-TCCTTG-TCTT--TCAATCTCT---G-----TACACAACAC----G-C--AGCCGTTCATCATGTTCTTC-TT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCCT-CACAATCATGAAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAAC--C-----TTTGTA-----------CGTCA--------C-AAAAGTAGG----ATTCTCCCTCGATGATTCCTC-T--AACTCAATCTGGTGGTAA--CCACTC-CTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATA--ATCGCAGC--ATTCGCT-TG-CTCATATCCACACACAATCTAATGT--CACCATCGG-CTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCT
gi|5 : ACGATGACTGGACTA-ACCTCATGG--TGTTTGATCATCGACTTTTCGGCTCGATAATGCTTCCTGAGATTTCCAGTTCCCTCAGTGCTAATAAAGGAAATTCGGTATGATTTGGCTTTGCGCTTGAAGGCAAGTTCTACTTGTTCTTTGTCAATA-ATAGATAGGCATTCACTTTAGTAAAGTTCTT---TTTCTATATTTTTTTTGCCATATTTCTCATCTCAAAACACCTTATACAGATAGAAAATTATTGAATCAATGCCGTCCAGCCCTACGATTCTGTTTACAAGTATTAATCTCTTCAAGCTTC--AACACCCTAAAGGTCGCCATTGCGGGGTTATTCTTTCGCCC
gi|6 : TGATA--TGTAGTCTGCC--ATGT-TCT-CCTTCCCTGGTGCA-----T---ACT---------TTA---TGGT-A--AACTTATAGGGTTGGAGACAAAG-TC-CCCATCTTTCAATGC--GAAGTGATGGACGC-GTCTTC--TG-----C--CAGAT-AG-TT---T-CCAGC----GGCTTGTGATCTGTAA-TGA-TAGTGGAAGTGGT-GCAAGCTGCTTAA-ATACAGATCAAAGTG--------CTCACAAGCCCAT-GTTATCGCTAAGGCTTC-TCGCTCCGTC---TGACTGTATCTC----GACTCA-A----CT-G--------GGGTAAGGGC----------TCT-----------------GCTTGC-ATAG-C--ATAGT----A-AGCATGCC-A-----CTCTG-----TCATCGT---C------TT--GAAGCATAAT--GGCTCCCAA-ACCGACTGG--ACTTGCGTCTACTC-TAA--T--T--GTGACTGATTTCTGTGGA-TC-ATGA-T----ATGCTATGA-CATCATCA---CTGCACAG-GCT-GTCCTT---CAAC--TTAAG----G--------AATGCT-TT---TTCACAC--CTAGAGTCCCAATGCCAGG-ATTTGTCTTTGTGAG-T--GAGTTCTCTG-AGAGG-TTGATAAAT-GTCAGTATAGTTCTTTATGAAACGTGAACTGTAGTGCGTACTTCCTCAGAATCTCCTAAAGTCTTTAA-CGT-TCTG-----CGGCC--TAC-----TGAATTCCTGGATTGC-GT-T-GACCTTTTCGGGGTCG----GGTG--ATATGCCAC-TGT-CT--GAA-AAC-ACA-ACACC-GAAAA-ATGAAATCCT-GTTTGTTCTGAATTCACATTTATTACGGTTTACAGTCAG-GCCATGCTCCC--TCAGCCTTTCGAG-----TACTCTA---T---G-T--AGTGCCTGGTCATGCT--GC-TTAAGGTCTGTT-CCGAAAA-TCACAATATCATCGGATATGTTT-GTGGTACCTGTATATTCCTGAATTAGCTGTCGAATAGTTTCGTGGA-AT-ATTTCTGAT-GCTGACG-TATACCGAAGTTGAGACGCTTGTAAC---ATAAAT-GCCAAGTGTGTAT-GAATGTAGTTATAAATCT-----G--GAGTTCTGGT-GAG-TCAAGTTGGTGAT-TT-CC-CTG-CGGTAGATCCAGCTTGCTGAACACCTTGCTCC-GTTCAGGTC-CAATATAAGTTCCTCTATAGTAGG--TAGAGTG-TGTT---CG---------GCTGCTTATTGGCCTCC-CTCATATCAACACATAAGCGAATCTTCCTCCGTT---CTTCTTAGTGGGTCACTA-------TGGGCGATACC-CATGGATTGGCTCACCATCGCC--T----CTCAATGATA--TCCTgcaatctaatgcttagagtgaccctatttcacgtaataactatacacatagacattacccgcggttgtacaatattttaccagtaataaataattttgaaaatatcatagaatcgtattgttgggaaattaattaacccttattagcaaagactcctaattgttgttcatgttggcaccacatagttacgcatttgagcaagtttctagacatcatatatttactgaataggagcattattccaaatgttatcattttatgcaacctgcaagtcgtctccactatctttttgtcaattgatattcactgactgcgaccactgcaagtattgaaatcatactatgatgactctccaatacctgagacgtttccagaatacataaatgactcacaaacacaatgcaacacacattcaagctttgcagaatctaacagtctgacactttcccctcgtttgtcaaatcttccgtttaattttgagttgggtttcgtcaatacaagtgatacaggacacggttcatgaatatatctacttgaccacgaaacttgtctacatgtgaatctgatccttacaggacatgaaaagatccctgcaagtgcctactatgtttcccacagcgaataacacattattttaaaccatatttgtcaatttcacctttgcgtttttgtttcccattccgttgcctgaatgattctgttgtcctggagggggttgtttcttgtatccatgtgttttgcttgaacttcgtcatcgtgctaccagtagtctagacacaaagtttcgtaactgttctattttaaagtcactccctctctctgagctaacttagcgccgtgattctgtgagacctacatcttttcaataatttgatcccgatttgaattcactcttggtttgccgcaagtcacagtcacttgcttgcctgtctcagtcttatcaaaaaactgtgtctactgtttctttgtcggtttgtgtaattttcggaacagctaacgctctaatttgaacattcattgttattctcaatcaaatattttgtcatgcgttttcacagtcactgt
gi|7 : TTCTGTGCGTTTCATTGGCTCAGGTTTACTAGGTT-GAC-CT---ACTA-T-TGACAACCAAAACATACTTTT--------GCAAAAC--TTCTCATACTTCTT-ATCCATCCCTGGCCACCAAACTTTGCTTCTTAATAGCGACTTCATGGCAACAATGCCTGGATGTCCTTCATGTGCAAG--A----TCAAGAACCCTATCA-CGCA-----TTTGTGGTG---GGAAT-AC---A-----TTCGCGTACCTTGTAATACTAATTTCCCAATAGAAC--ACAATTCACCC--CT-TATTGGCAA-TACTGTTTGTAC-TCAAT----ACGAT-G---CCA-CTGTTG--ATTGA-CAGACATTGCTA-ACA-GCACAAAGCTCGGGGTCATTCT--CT-GATGTCTC--TCT---TATCTCACG--AGTTGTC----AT-AGCAAT-GGG-GAAGGTTGC------TTCTTCAGCTACAA---CCTAACA-TA-ATCATCTACCAG----ATCAGAAGACT--TCTG----CA-------------------CT-------AAA-T------CAT-TCCTAACAAGACGTGAAA-GCGTG-TCCGCT--ATAT-TCT-TCGGACC---TGAAATGTACCGAACC---------TTAAAAGTGT-GGGTTG-CATGCG--------CAACA----CCCATCGTTCTATTCTAGCG-CA--GACCTTTGACTTT--GTAGAATA--TATAC-A---T---T-CTAGC----GGTTTGTGGTCAGTGA--GAAG-----------C-TCAAACTCTACACCGTATATATAAACATG--AAATCTTTCACATGCCCAT-ACGAGGGCTAGCGCCTC-TT------TC---T-----CAG-TCTGA-GAGT-A-C----CG-A--------CG-------T----------TCTGTATCACTCAAGCTACGGCTTGC-ATAAGA-GATAAC----C-CGAAATTC-A-----CC--G-----TCTTGTT---C------TT--GCACCAGCAC--GGCGCCTAA-TCCAACAGtctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttctgtgctacacgttgtaccgattcatcaatatggattttcacctgacgttcctttcattttcctatcctcggaacagtctggaaactcgtttcaacagtgtc
gi|8 : tttcgaccaaacagtaactgagacggacaaacaccagtcgtggtgtgtggggtatttcgatacataatcagaaatttgtcaagttcagatttccaatctcgaccttcggcatgagcaattcaaacacgtttcaaaattgacctattttatcgttccacctcgccgttcgcctgcggccataaaaggagtccattctggtgatgaagactattgccgttttctaacataaattctttaaaatttgactcgcaaattgaggaccattatcagtatgaattgaaaacagtagaccatgagtaaaaagaactttgacattaacgccatgatattctcagacgttgtttttgtaaactgccattcaaaatatctactgtaataattaactagtacaaaaatatactctttactcgcaatggacctaaaacgatcagggcaagatgtgccatggcgcagaaggtaaACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTG---TTTGTCAATATGTA-----GC-TTCAACTTA--AAAGTCTTTCAATTTCCA-ATT
gi|8 : AGGAAATTCTTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCCcaggaaattcttgaataatgtcacctagctgtacagtattaactccaagcttcaaaacaccctaaagccattgcggtatcttcgcccaacaatgctggtccttttccgttcaacacatagaatttccgcttcattccagtatagaaatctgtgttggaatttaccctagcaagcctaatgtgtcagtggcaccatacgcatacagtttcttgacatatttttgtgaatggctttcaaatgtttctttttcaactcgtccactattttttgtcaattatattcactgacgcacccatgtcaatgatgaaatcaacatgatgacctccaatactgacccgagtttccagatacatcaacactaacgcacacacatcatcagattcagaatctaacatctggactttccctcgtttgtcaaatttccgtttatttgatttgggtttcgtcatacaagtgatacaacacttcatgaaatatcctatctgaccacactttctacagttctgatcccttacaggacatgaaagatcccttgcaaagtgcccttgtttcccacagcgataacactttttaacatatttctcattctcacctttgcgtttttgtttcccattgttgccatgaattctgtttcctgacggtgctgtttctgtatccatgtgttttgcttgaacttctgtcatctctacagtagtctagacactatagttcgtaactgttctaattttaagtcctcccctctctcgagtaacttagcccgaattctgtgagacctacacttttcaataatttgatcccgaatttgttcatcttggtttgcgaagtcacagtacactgcttgctgtctcagtcttatcaaaaactgttctactgtttctttgtcggtttgtgtaattttccggaacactaacgctcatatggaacattcattttattctcaaaatatttgttcagcgttttcacagtcactgtatacacggtgtcatcctgtacactctgaacttcatttaacgtgtaataaatgtctt
gi|9 : acgatgactggactaacccatggtgtttgatcacgactttctcgtaatgtcctgagattccagtccctcatgctataaggaattcggtacatcgcttgcgcaacaagtttcacttgtttgtcaatatgtagcttcaacttaaaagtctttcaatttccaattcTTCA---TGATCCTTT---GAGGATTC--CTCGCGAAT-----G--TGTTGA-----A--GGCCTT-TGG-G----TTACATTGCGTTACCTC-CTCCTAA--CATA-CA-GA-ATA--C---CGGCATTATT------CTCTTCTGACATCG---T--TTCTGGACTTTCCCCTAGCATTAGAACA---G-TTTCGGCT--CAAGGCGAGACAAGCGCA-TCAGCGT-GCGTCTCT-AGGTCCT-AGT--AATGTAC---ACTAAACT----TCAAACATGTCA--TGGCTG-AAGGCC-----TAAGCTGT-CC-AGCGTTCGATTCTaacaatgctggtccttttccgttcaacacatagaatttccgcttcattccagtatagaaatctgtgttggaatttaccctagcaagcctaatgtgtcagtggcaccatacgcatacagtttcttgacatatttttgtgaatggctttcaaatgtttctttttcaactcgtccactattttttgtcaattatattcactgacgcacccatgtcaatgatgaaatcaacatgatgacctccaatactgacccgagtttccagatacatcaacactaacgcacacacatcatcagattcagaatctaacatctggactttccctcgtttgtcaaatttccgtttatttgatttgggtttcgtcatacaagtgatacaacacttcatgaaatatcctatctgaccacactttctacagttctgatcccttacaggacatgaaagatcccttgcaaagtgcccttgtttcccacagcgataacactttttaacatatttctcattctcacctttgcgtttttgtttcccattgttgccatgaattctgtttcctgacggtgctgtttctgtatccatgtgttttgcttgaacttctgtcatctctacagtagtctagacactatagttcgtaactgttctaattttaagtcctcccctctctcgagtaacttagcccgaattctgtgagacctacacttttcaataatttgatcccgaatttgttcatcttggtttgcgaagtcacagtacactgcttgctgtctcagtcttatcaaaaactgttctactgtttctttgtcggtttgtgtaattttccggaacactaacgctcatatggaacattcattttattctcaaaatatttgttcagcgttttcacagtcactgtatacacggtgtcatcctgtacactctgaacttcatttaacgtgtaataaatgtctt
gi|9 : atttcctagtgaccttcgtttgtgccagaggaaattgtattatcttctaggaagttgccgttcaatttatgcatctgagtatacgatgttcacataacatgtagcacaatgccatcaacgactgacattctgaatgtatcctgcgcaactcgtgtttttgaaaattgttgtctgtcttagatcaccaattatatgatgtctttaAGT----GGTATGTGATCTGTC-CAGA-T-----------TCTCACACTTAA-GCCATA-ACGTACATGTGGCAATTCTCTCGCAT--CTAA-ATTACCCACAGTGCTTC-TC------TC---T-----CCG-TCTTGAGAAT-ACAGTTTCTCA--------CA-------T----------TCA-----------------G-TAAG-ATAG-C-GACAGCTTAAA-TGAATTCCGA-----TC--ATGCATCTGTGTT---C------CTTGGGACCAGTACTTAGCACCCAGAACTTACGGGCAACGCGCGTC-GACTATGACTC--T--G-G--T---TCCTT---A-TTATTGG-TTGTAGTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT-TTCAGC-TCGTTCGAATGCTC----CTCCCTTGCTGTTTGGTCCATTCATCCAAG---C---T-C-A-C-GTTCTTCTTGG-CAA---------CTCGAAAGCGGACGCAGCTATTGTCGAAA-AATaacgggcggttattgattgtggatagatagtaattatataccatgtaagtggtatgtgatctgtccagattctcacacttaagccataacgtacatgtggcaattctctcgcatctaaattacccacagtgcttctctctccgtcttgagaatacagtttctcacattcagtaagatagcgacagcttaaatgaattccgatcatgcatctgtgttccttgggaccagtacttagcacccagaacttacgggcaacgcgcgtcgactatgactctggttccttattattggttgtagtaaacaagtgtttcggcgcttactaatgcacgttttcagctcgttcgaatgctcctcccttgctgtttggtccattcatccaagctcacgttcttcttggcaactcgaaagcggacgcagctattgtcgaaaaat
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): CAATTCTAAGCGGAGGTTTGGGGCGTTTCCAAATGCCAAGTAAAGGTTTATGATCGGTGACCACACGGAAGTGAGGCGCACCTCTCAGGTACATATCAAAATGTTCGCAAGCCCAGATAATAGCTAACGCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGTAGCGCGATTCTGGTCCGCTGAGTGATAGGCTTGCACAAGCAACAACTTTGCTCTCTTGCGTCAGTATAGCCCCTAAGCCAACAGGGCTGGCGTCAACCACAACTTCGATAGGTTTGTTCGGGTTGTAATATGAAATTACGATATCGCTGGACAAGGTTTTGAGTTTTTCAAACCCACTTTCCTGCTCAGATGCCCATTGCCAATCGGTATCCGAACGTGTTAGACGGCGAAGCGGTTCGCTCACAGTGGAATAGTCAGGTATTAACCTGGAGCAGTATGCGGTCATTCCCAGGAAGCTCCTGATTTCACTCGCATTGGAGGGACGTTGCACGTCTTGAATAGCGGACATTTTCTCGGGGTACGGCGAGATACCAGCTTTACTGAACACTATTCCAAAGAAGGTGATTCGGTCAGAGTTGAATTCACATTTGAACGGTTCAGCATTAGTCCAT
Unaligned ( gi|12 ): ATTAATTCTGTTCACTGACGGCGCTTTTTCTGTATCCATGTGCTTTGCATGAACGTCTGTCATTTGTACAGTAGGCGCTATGGTTCGTAACTGTTCTTATGATAAGTCCCTAACTTTCTCGAGTAACTTAGCCCTAACTTAATGAGACCAACAATTTTTCCCCCAATTTTTGCAAAGTCACAGTAAAACTGCTTGCTGTCTCATTCTTGTCTAAAATTGTTCTAAAGTTTCTCTCTCATTTTGAGTAATTTTCAAAATACATATATAATTGCTCATACGGAACATTCACTTTATTCGCAAAATATTTATTCAGTGTTTTCACAATCACTGTGTACACGGTGTTAACCCGTACGCTCTGAACTTCATTTAACGTATTGTAAACGTCT
Unaligned ( gi|13 ): TTTCGATTTGAAGAGTAATTCGGGCTGGACTTTTACCGGTCGTGGCTGGGAGTCGATCGATACGCAAGTAAAAATCTTGGGTTCCACCAGCGTGTATTCTTTTTTCCAGTCTCCCCTCAGCGTTTGGCTGTGCACTTTGAAGTAGAGCTTCAGATAATCGGAGATACAGATTTGGATGCTTTTGATGTCCCACATGGGGCCCTGGCTAGAGGGTGTTGTTTGTATTGTCTACTCCCGTTTATTCTAAGGTATTTTTGGAATTCTTCGGATACGAAACTTGCGGACCGTTATCA
Unaligned ( gi|14 ): AACATCTGAACATTCCCTCGCTTGTCAAATGTCCGTTTAGCTGATTTGGGCTTCGATATGCAACATTAACACTTCATGAAATGTCCTATCTGGTCATAGCTTTCTACAATTCTGATCCATGACTAGACATGAAAGATCCAAAGTGTCCTTATTTCCCACATCGACAACATTTTTACATTCTCACCTTTGCGTTTAGATTCCCCATTGTTTCCATGAC
Unaligned ( gi|16 ): TGTTTGATCCCATTTGTACGAGTAAATCTCTTGAATTCCTCTGAAGTGAACTGAGGTCCGTTGTCGCTGACCATAACACTAGGAACTCCATTCCTTGCAAATATGTTTCTAAGGACTTCAATAGTTTTG
Unaligned ( gi|18 ): ATTCTCACCTTTGCGTTTTTGTTTCCCATTGTTGCCATGAATTCTGTTTACTGACGGTGCTGTTTCTGTATCCATGTGTTTTGCTTGAACTTCTGTCATCTC
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111111 111 111 22222222 3333333 11111 222222222 111111 11 11 22222 11 1111 2222 2222 222222222222222 33333333 111111 111111 3333333333333333333333333333333333333333333333333 0000000000000000000000000000000000000000000000000 111 1 111 555555555 11 4444444444444444444444 11 666666666666666666666666666666666666666666666666666666666 22222222222 111 2222222222222 11111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111 1111 2222 1111111 222222222222222 1111111111 11111111 111111 111 11111111111111 11 1111111 22222 1 111 1 4444444444444444444444 222222 444444444444444444444 666666666666666 111 111 11111 222222 22222222 111 2222 1111 11 111 11 1 11111 111 11111111 44444444444444444444444444444 1111 1111 4444444 66666666666666666666666 33333 33333333 111 11 222 1 11 1 1111 11 1 1 11 1 11 22222 11 1111 1 1 1 1 11 1 11 1 2222222 222 3333333 222 8888888888888888888888888888888888888888888888888888888888 1 7777777777777 222 2222 222 11
lowQualScore : 1 1 666666666 6 111 666 1 44444444 1 9999 6 1 3 22 1 2 22 88 4 0 1 0 5555555 1 99999 22222 666666666 4 5 0 11 1 0 666666 5 0 1 55 1 0 11 99 8 3 00000 8 11 7777 0 88 0 777 8 8 8 0 5 8 2222 0 1111 1 1 111111111111111 99 11111111 6 666666 999999 2222222222222222222222222222222222222222222222222 1111111111111111111111111111111111111111111111111 88 6 6 1 555 4 5 7 0 999999 1 0 000 222222222 77 22 33 1 4444444444444444444444 00 1 2 0 222222222222222222222222222222222222222222222222222222222 00000000000 777 8888888888888 5 1 7 6 3 1 888 1 88 66 11 1 66666666 55555555555555555555555555555555555555555555555555555555555555555555555555555555 1 2222 5 3333 4444444 5 777777777777777 1 1 5555555555 66 1 1 66666666 99 2 0 5 1 1 77 0 2 8888 999999 0 000 55555555555555 1 77 66 1 8 333 9999999 55555 1 000 2 2222222222222222222222 0 444444 888888 333333333333333333333 1 1 333333333333333 1 222 1 6 0 1 5 2 99 1 6 3 0 1 111 11111 66 1 0 4 333333 44444444 222 5555 1111 11 9 000 99 0 6 44 99999 444444 000 2 1 1 6 1 3 77777777 1 33333333333333333333333333333 22 999 1 99 7 9999 6 3 77 6 7777 99 1 4444 8 0 99 0 8 1 3 1111111 99999999999999999999999 8 1 33333 1 11111111 1 777 33 0 444 0 1 8 1 11 0 1 6 22 5 1 4 2 33 0 2 3 9 3333 11 1 33 0 0 0 1 0 1 1 33 4 0 11 55555 33 3 6 6 99 7 4444 7 99 3 3 3 3 88 3 88 3 3333333 333 7 6666666 555 5555555555555555555555555555555555555555555555555555555555 3 0 0 3333333333333 333 7 8888 333 88
lowQualScore : . . ......... . ... ... . ........ . .... . . . .. . . .. .. . . . . ....... . ..... ..... ......... . . . .. . . ...... . . . .. . . .. .. . . ..... . .. .... . .. . ... . . . . . . .... . .... . . ............... .. ........ . ...... ...... ................................................. ................................................. .. . . . ... . . . . ...... . . ... ......... .. .. .. . ...................... .. . . . ......................................................... ........... ... ............. . . . . . . ... . .. .. .. . ........ ................................................................................ . .... . .... ....... . ............... . . .......... .. . . ........ .. . . . . . .. . . .... ...... . ... .............. . .. .. . . ... ....... ..... . ... . ...................... . ...... ...... ..................... . . ............... . ... . . . . . . .. . . . . . ... ..... .. . . . ...... ........ ... .... .... .. . ... .. . . .. ..... ...... ... . . . . . . ........ . ............................. .. ... . .. . .... . . .. . .... .. . .... . . .. . . . . ....... ....................... . . ..... . ........ . ... .. . ... . . . . .. . . . .. . . . . .. . . . . .... .. . .. . . . . . . . .. . . .. ..... .. . . . .. . .... . .. . . . . .. . .. . ....... ... . ....... ... .......................................................... . . . ............. ... . .... ... ..
lowQualScore : 0 0 888888888 7 777 000 0 22222222 0 3333 7 0 3 55 0 2 55 33 0 7 0 6 7777777 4 33333 44444 666666666 3 4 4 44 0 6 444444 0 6 7 77 3 8 00 00 0 2 00000 0 00 0000 8 88 8 000 0 0 0 8 0 0 4444 7 4444 0 0 888888888888888 22 22222222 7 222222 222222 5555555555555555555555555555555555555555555555555 0000000000000000000000000000000000000000000000000 33 7 7 0 333 0 7 1 7 777777 4 7 000 777777777 99 00 66 0 4444444444444444444444 00 3 7 1 999999999999999999999999999999999999999999999999999999999 11111111111 333 1111111111111 7 0 9 6 0 0 000 4 33 77 11 0 66666666 44444444444444444444444444444444444444444444444444444444444444444444444444444444 0 1111 7 7777 7777777 7 000000000000000 1 0 1111111111 99 0 0 55555555 66 1 2 0 0 1 99 4 7 9999 444444 7 000 66666666666666 9 99 77 0 9 444 9999999 66666 4 000 4 1111111111111111111111 7 999999 333333 666666666666666666666 0 7 333333333333333 7 444 0 6 4 0 7 2 22 0 7 7 3 0 777 88888 00 4 8 4 444444 22222222 444 6666 8888 00 6 888 00 0 0 22 99999 222222 222 2 0 0 7 5 5 77777777 0 00000000000000000000000000000 55 222 0 22 3 0000 7 7 33 7 8888 22 0 2222 0 8 44 8 0 4 2 5555555 00000000000000000000000 0 4 66666 4 66666666 0 000 22 6 888 6 0 0 0 55 8 0 5 88 0 2 2 5 22 0 5 2 2 2222 00 0 88 2 0 0 0 2 0 0 88 2 0 22 00000 88 2 7 7 22 3 2222 3 22 3 3 3 3 33 3 33 3 7777777 333 3 7777777 777 7777777777777777777777777777777777777777777777777777777777 3 7 7 3333333333333 333 3 3333 333 33
consensus : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT--ATGGC---CGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTNGC-A-C-G----GGCC-GNGACTTC--TTTC--CGTAN-AAA-CA----TT-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTCTC------T-CT---C-GTAGTCT---GAAT-A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAG-------CACGGCTCCCAG-ACCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCAGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTCGTTCGT--CCCGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAAC-CC-AGACGTTTGTAAC-ATATAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGATT-CCAGT-CCCTCA-TGCTA-TAAGG--AATTCGGTAC-ATC--GCTT-GCGC---AA--CAAGTTTCACTTGTT---TGTCAATATGTAG-----C-TTCAACTTA--AAAG-TCTTT---CA-GTCTTT-----CA-ATTTCCCAT-TCA---------AT-CA----GGAAATTCTTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
Reference ( family-2956 ) : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAANNTGT--ATNGC---CGTAAGNTTCAAAA-GT-CCC-ATCGTTCGATTCTCGC-A-C-G----GGNC-GNGACTTC--TTTC--CGTAC-AAA-C-----TT-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNACACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTCTC------T-CT---T-GTAGTCT---GAAT-A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAG-------CACGGCTCCCAG-ACCNACGGG--ACTCGCGTCGACCATAA-T--TG-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGTTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGNTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCAGCNATNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTTCTCA---CTTCAGAAGCGCTAGTTGGCTCATTGGCATC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGACAACACGTGCCCCGTAAA-TGTTATCTCGTTCAT--CCCGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-C--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAAC-TC-AGACGTTTGTAAC-ATATAAATCGTCAAGTGTGTAC-GAATGTAGTTATAAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGATT-CCAGT-CCCTCA-TGCTA-TAAGG--AATTCGGTAC-ATC--GCTT-GCGC---AA--CAAGTTTCACTTGTT---TGTCAATATGTAG-----C-TTCAACTTA--AAAGTTCTTTTTCCA-ATTTTTTTTGCCATATTTCCCATCTCAAAACACCTTATNCAGATAGGAAATTCTTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|1 : TCGGTTTTACTGGTTTTGGCTT----GCAG-GTGTCTGTCAGTAG-ATGACACTGACTACACGCTTTG--------ACAAA-T--ATCTC-TGCCTCCGTGTCCATTCCTGGCCACCATACCTTTTCTCTCAGTCGCTGTTTCGTACGTACAATTCCCTAGTGACCTTCGTGTGCCAG--AGAAATTGTA-----TTTTTTC-TAAGAAGTTT----TG---GCA-TCATAATACGAGTTCCACATACATGTAGCAC--AATGCCATCAACGACTGACAATTC--TGAATG-TAT-CCTGCGCAAC-----TCCGT--GTTTTGAAAATTG-TT--GTCTGT----CTTGATCCCAT-TTATGATGTCTG--TTA-TTTCA---TGATCCTTT---GAGGATTC-----------CTCGCGAATGTCGTG----AA-GGCTTT-GGGTA----CAGC------GTTCCTTGCAA-TAAA----------A-TA------CG--CAT----ATT------CA--TCTG----CGACGTTTCTGGAC--TTTCC-------CGT-TGAAAG--TT-G----GCCAAGGCGAGACA-GCGCATCAGCG--GCGT-TCTTAGGTCCT-AG---AATGTAC---ACTAAC------T--TAAACATGT--ATGGC---TG-AAGCCT---AA-GTGTCC-AGCGTTCGATTCTA---A-C-G----GGC----GGTTTTGATTTT--GGTGA-AAA-T-----ATA----CCA-----GTAAGTGGTTTGTGATCTGTC-CAGAT-----------C-TCACACT-TAAGCCCATAAACGTACATGTG--GAATCTCTCGCATCTAAAT-ACTACCCCCAGTGCTTCTC------T-CT---C-C--GTCT---GAG--A-A-----T-A--------CAG-------T----------TT-------------------CTCGACATCAGTAA---GATAGCGAC----AGGCTTA-AATGATCC--A-----TCATTCTGTTT------TT--GGACCAG-------TATAGCACCCAG-ACCTACGGG--ACTCGCGTCGACTATGA-C--TC-T---GGT---TCCT---GA-TT-TTGGGTTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT--TCA---GC-TCG-TCGAA----TGCGTCCTC-TTGCTGTTTG---GTCCATCT--CCA-----------G-C-TCACGTTCTTCTTGGTCAA-C--------TCG--AGCGG-CGCAGCTATTGTCGAAA-AATTTGATATGAACC--GGGCACAGTA-GTTTGCAAGTCCAAGGAAACTCCGCA---CTTCCGAGCTGTTTGATGGTTTAC--GCGTCTC--G-GTT---A----CTACCTTGATTTTCTC-T--TCGTCC-GGCC--GTATTCC-C--TCTGCTGAGATTATGTGTCCGAGAAA-AACAATTTC--TGATAGACCGAACTTGCACTTTTCACGGTTAAGCGTAAAACCCTTT-TGCA--TCAATCTAT---C-----TA-----GTAACTTTGAT--AGTTTTTCATCATGAT-TGGCCT--GGTCGGCG-CCATACA-CAACAATGTCGTCAGAGAGATTTCGTACTCCCTT-CA-GAC--CCTG----AATCACTTGACCAATGACT-CTTTGGTAT-ATTTC-GGACGCAGACGAAATTCCGAACATC-AGCCGTTTATAGCGATATAAACCGTCATGTGT-TGT-GAATGTTGT----AATTTCCCT---TGACTCCTCGTCAAGTTCAATTTGGTGATACCCCA--TCGA-AGGTCTAGTTTCGAAAAGACTTTACTTCCATTCATGTC-CTCTAGTATCTCGTCAACAGTTGGTATCGGATGACGCTTC-CGTCTTACTGCTAT--CTTTG-CGCGACGCATGTCGACACAGATTCGAATTT--CGTCATTTTTCTTC-----GAG--ACTACG-------------ACC-CATGC--TGACGGCTCATCAACTTT----TTCGATGATG--TCTT
gi|10 : ttttccgattgaagagtaattcggctggacttttaccggtcgtggcatgcggagtcgatcgatacgcaagtaaaaatttgggtaattcttttttccagtctcccctcagcgtttgcggctttgatggccttcagtagcgtgcgattttgacttccccgttcccctggggccaatagggtgttgtttgtatgtgtctaactcccgtttattctaaggtattctttgaattcttcggatacgaactgcggaccgttatcacaacgaatgctttgaggaataccgtgtctcacaaacattgcttccatctgtagaattatcctttcactggttatttttttaggatagctacttcttgatatcttgagaagtaatcgacgactaccagaaggttctctcccgagggaaatggtcccgtctcatcaaatcaatagccaaatcttgccacggtccatcgggcattggtgGCTCT---C------TT--GCGTCAG-------TATAGCCCCTAA-GCCAACAGG--GCTGGCGTCAACCACAACT--TC-GATAGGT---TTGTTCGG--------G-TTGTAATATGAAATTA-CGATATCGC--TGGA-CAA-G---GTT-TTGA---GTTTT--TCAAA----C----CCACTTTCCTGCTCAGATGCCCATTG--CCAAT----C-GGTATC-CGA-A--CGTGTTAGACGG-C--G------A---AGCGG-TTCGCTCACAGTGGAAT-AGTCAGGTATTAACCTGGAGCAGTATGCGGTC---ATTCCCAGGAAGCTCCTGA---TTTCAtatcctctagctcgtctagcttcttgcgcattgctttcctgacgttgaacggtaaacgccttagaggttgagctactggcataacagcgtcatcaaggtgaattttcaggcgaaagtttttcagtttgcct
gi|11 : caattctaagcggaggtttggggcgtttccaaatgccaagtaaaggtttatgatcggtgaccacacggaagtgaggcgcacctctcaggtacatatcaaaatgttcgcaagcccagataatagctaacgcccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngatgtagcgcgattctggtccgctgagtgataggcttgcacaagcaacaactttTAATGTTGTTGGTTTGATAGGTTCTGGTTT--TGGAAATGCG-CT---GGTAATCTGACATCCATGACATAATTTC--------ACATA-T--TTCTC-CACGTCTTTGTCCATACCTGGCCACCAAACTTTATTTCTCAACTGCTGCGTAGTACCCACTAATCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATCCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTA--CGTAAT-GGTAAATAAT-----TAC-T--AT----AGGATTGATCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-AATTGGACAA-GTTCC---TCATCCTTCCTAGAAGCTctcgcattggagggacgttgcacgtcttgaatagcggacattttctcggggtacggcgagataccagctttactgaacactattccaaagaaggtgattcggtcagagttgaattcacatttgaacggttcagcattagtccat
gi|15 : ataacgactgaaatagtccaccaacaacaacatattgcctgtagtgttaacggccaagcagatctatcgctaaatcttgccgcaatccagttggTATCTCAGTCTT--CCGGAATTCACACTTGTCACGGTTCAGTTT-CAGTCC-TG---------AATC-CT---GGATTCTGC----GGAACACTG-TCAAGCCTGTCATCATGCTCCTTACG--GGTTT--T-CCATGAATCAA-GATATCATCAATGATAACCTCTACTCCC-T---CGATTCCATGTAGTAATT--CTGTCA
gi|17 : -AGACGCTTGTAAC-A-ATAAAT-GCCAAGTGTGTACTGAATGTAGTTATAAATCT-----G--GAGTTTGGGTGAAGCTCAAGTTGGTGAT-ATCCCCTGCGT-AGATCCAtctt
gi|19 : ttgCTGGGTGACCTTCGTGAGCTAA--T----TCCAAAACG-TGTGTTCGCAA-----TT----CAGTCGGAATAACAATTCGGGTCCCTC------GGAGAATTAGTTTTCCAATGCAAC--ACAATT
gi|2 : TAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAATTTTT--A-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT--ATTGT---CATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTCGC-ATT-G----GGTC-GAGACTTC--TTTC--CATACAAAA-C-----TT-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTCTT------T-CT---T-GTAGTC----GAAT-A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAA-------CACTGCTCCAAG-ACCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA----A----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTTGTTCAT--CCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAAC-C-------TTTGTA-----------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGATT-CCAGT-CCCTCA-TGCTA-TAAGG--AATTCGGTAC-ATC--GCTT-GCGC---AA--CAAGTTTCACTTGTT---TGTCAATATGTAG-----C-TTCAACTTA--AAAG-TCTTT---CA---------------ATTTCCCA--------------ATTCA----GGAAATTCTTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|3 : TCGGTTTTATCGGTTCCCGTT----------GCA-CG---TGT----TGTCACCATTGACATGTATTCATGCCTTGACAAA-TAATTTTC-AACTTCTGTGT---------GCCA--ATACTTTTTCGCGCAGCCGTTGTTTG------ACTATTCCTTGATGTCCCTCATGTGCAAGAAA----TTGTAT---CCTTCCTCATAG--ATTTT---------GGCATAAGTATTCGGGTTCCGC------GTAATAC--AATACCATCAAAAACTGAAAATTC
gi|3 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgTTCG---CGATCCTTT---GATGATTCCCTCC---AAACT-TCG--T--CGATTGTGAG-GGCTTTTGGA-A----CCGC------ATTCCTTGCAATC--A--TCT--G-CAATATGTC---T--CAC-----TT------TG--TCTG----C-----TTC---------------------A-T-----------TCTGACTAAGAAGTGGCA-AAGCATCAGCGGCAT-T-TTT-AGGTCCT-GGCG---TGTAT---ACTAGGACTAGCT--TGAACGTA---ATGGC---TGTAG---TCGAAGCGT-AC--AGCGCTCAATCCTTAC---C-G----G-----TGGCTTCGATTTCGGCGAGA-AAA-TATA--TG-----TCA-----GC----GGTTTGTGGTCCGTC-CAGAT-----------T-TCGAATT-CAAGCCCATAAACGTATATGTG--AAATCTCTCACA-GCCAAAGACTACTCCTAGTGCCCCTC------G-CT---CCGT-TTGT---GAAT-A------TT-GTTTCTCGAC-G-------TCGGTTAGAGATCT-----------------GCTTG----C-GTA----GGCA--A-C----GGGTTTA-A-----AC--GAT---CCGTCCC---CCTGTTTTT--GTGACAT-------TATAGCTCACAG-TCCTACGGG--ACTCGAATCAACTATAA-TATTA-T---CCT---TGTTTCGGACTT-TCGG-TTGTA--ATAC-ACCAGTGTTT-----------CAA-A-----TCTTCAAACGCATC----------------CT--GGTGCCGTTTG---GTCCACTT--CCAAA----C---TG-C-A----TTCTTTCTAGTCAA-TTAA----CGC---AAAGG-TGCAGTAATCGTTGAGA-AATTCTGTATGAACC--GCCCACAATG-ATTCGCCAGTCCCAGGAAGCTTCGTA---CTTCAG---CACTATTTG-----TTGACTTG-C--GTGTTTCTGACACCGCT-TTGATCTTCTCG---TCGT-CCGGTCGACTATCACGTGTACG--GGA-AACACGATCCTCGTAAA----------GT--------CAAATTTACATTTTTCACGATTCAAAGT-AAGGCCTT--TCTTAACCAGTCTATCAAG-----TATTTTGGCAA-ACT---------TTTCATCATGAT-CTGCCT--GGTCTGTT-CCATAGA-CAACAATGTCATCGGAGAGATTCCGTACTCCT-T-CAAGAC--CTTG----GATCACTTGACAAATCACT-CGCTGATAGATCTATTAGA-GTTGGtgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacttcgcgatcctttgatgattccctccaaacttcgtcgattgtgagggcttttggaaccgcattccttgcaatcatctgcaatatgtctcactttgtctgcttcattctgactaagaagtggcaaagcatcagcggcatttttaggtcctggcgtgtatactaggactagcttgaacgtaatggctgtagtcgaagcgtacagcgctcaatccttaccggtggcttcgatttcggcgagaaaatatatgtcagcggtttgtggtccgtccagatttcgaattcaagcccataaacgtatatgtgaaatctctcacagccaaagactactcctagtgcccctcgctccgtttgtgaatattgtttctcgacgtcggttagagatctgcttgcgtaggcaacgggtttaaacgatccgtccccctgtttttgtgacattatagctcacagtcctacgggactcgaatcaactataatattatccttgtttcggactttcggttgtaatacaccagtgtttcaaatcttcaaacgcatcctggtgccgtttggtccacttccaaactgcattctttctagtcaattaacgcaaaggtgcagtaatcgttgagaaattctgtatgaaccgcccacaatgattcgccagtcccaggaagcttcgtacttcagcactatttgttgacttgcgtgtttctgacaccgctttgatcttctcgtcgtccggtcgactatcacgtgtacgggaaacacgatcctcgtaaagtcaaatttacatttttcacgattcaaagtaaggcctttcttaaccagtctatcaagtattttggcaaacttttcatcatgatctgcctggtctgttccatagacaacaatgtcatcggagagattccgtactccttcaagaccttggatcacttgacaaatcactcgctgatagatctattagagttgg
gi|4 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgtcggttttatcggttcccgttgcacgtgttgtcaccattgacatgtattcatgccttgacaaataattttcaacttctgtgtgccaatactttttcgcgcagccgttgtttgactattccttgatgtccctcatgtgcaagaaattgtatccttcctcatagattttggcataagtattcgggttccgcgtaatacaataccatcaaaaactgaaaattctgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacTAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAA--TTTTTA-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT--ATTGT---CATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTCGC-A-TTG----GGTC-GAGACTTC--TTTC--CATAC-AAAAC-----TT-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTCTT------TTCT---T-GTAGTC----GAAT-A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAA-------CACTGCTCCAAG-ACCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA----A----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTTGTTCAT--CCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAAC-C-------TTTGTA-----------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCT
gi|5 : ACGATGACTGGACTA-ACCTCATGG--TGTTTGATCATCGACTTTTCGGCTCGATAATGCTTCCTGAGATTTCCAGTTCCCTCAGTGCTAATAAAGGAAATTCGGTATGATTTGGCTTTGCGCTTGAAGGCAAGTTCTACTTGTTCTTTGTCAATA-ATAGATAGGCATTCACTTTAGTAAAGTTCTTTTTCTATATTTTTTTTGCCATATTTCTCATCTCAAAACACCTTATACAGATAGAAAATTATTGAATCAATGCCGTCCAGCCCTACGATTCTGTTTACAAGTATTAATCTCTTCAAGCTTC--AACACCCTAAAGGTCGCCATTGCGGGGTTATTCTTTCGCCC
gi|6 : TCTGCC--ATGT-TCT-CCTTCCCTGGTGCA---TAC---TTTA--------TGGTAAACTTAT--AGGGT---TG-GAGAC---AAA-GT-CCCCATCTTTCAAT----GCGA-A-GTGATGGAC-GCGTCTTC--TGCC--AG-AT-AG--T-----TT-----CCA-----GC----GGCTTGTGATCTGTAA-TGATAGTGGAAGTGGT-GCAAGCTGCTTAA--ATACAGATCAAAGTG--------CTCACAAGCCCAT-GTTATCGCTAAGGCTTCTCGCTCCGT-CTGACT-GTA-TCTC--GACTCA-A----CT-G--------G-GGTAAGGGC----------TCT-----------------GCTTG----C-ATAG-C--ATAGTA-A----GCATGCC-A-----CTCTG-----TCATCGT---C------TT--GAAGCAT-------AATGGCTCCCAA-ACCGACTGG--ACTTGCGTCTACTCTAA-T--TGTG---ACTGATTTCTGTGGA-TC-ATGA-T------ATGCTATGA-CATCATCAC---TGCACAG-GCT-GTCCTTCA---ACTTA--AGGAA---------------TGCT-TT------TTCACAC--CTAGAGTCCC-AATG-CCAGG-ATTTGTCTTTGTGAG-T--GAGTTCTCTG-AGAGG-TTGATAAAT-GTCAGTATAGTTCTTTATGAAAC--GTGAACTGTA-GTGCGTACTTCCTCAGAATCTCCTAAAGTCTTTA-ACGTTCTG--CGGCCTACTGAATTC-CTGG-ATT---G----CG---TTGACCTTTTCGGGGTCG----GGTG--ATAT-GC-CACTGTC-TGAAAACACA-ACACCGAAAAATGAAATCCTGTTTGT--TCTGAATTCACATTTATTACGGTTTACAGT-CAGGCCATGCTCCC--TCAGCCTTTCGAG-----TAC----TCTA---TG-T--AGTGCCTGGTCATG---CTGCTTAAGGTCTGTT-CCGAAAA-TCACAATATCATCGGATATGTTT-GTGGTACC-TGTATATT--CCTG----AATTAGCTGTCGAATAGTTTCGTGGA-AT-ATTTCTGAT-GCTGACG-TATACCGAAG-TTGAGACGCTTGTAAC-ATA--AAT-GCCAAGTGTGTAT-GAATGTAGTTATAAATCT-----G--GAGTTCTGGT-GAG-TCAAGTTGGTGAT--TTCCCTGCGGTAGATCCAGCTTGCTGAACACCTTGCT-CCGTTCAGGTC-CAATATAAGTTCCTCTATAGTAGG--TAGAGTG-TGTT---CG-------GCTGCTTATTGGCCTCC-CTCATATCAACACATAAGCGAATCTTCCTCCG-TT--CTTCTTAGTGGGTCACTA-------TGGGCGATACC-CATGGATTGGCTCACCATCGCC--T----CTCAATGATA--TCCTgcaatctaatgcttagagtgaccctatttcacgtaataactatacacatagacattacccgcggttgtacaatattttaccagtaataaataattttgaaaatatcatagaatcgtattgttgggaaattaattaacccttattagcaaagactcctaattgttgttcatgttggcaccacatagttacgcatttgagcaagtttctagacatcatatatttactgaataggagcattattccaaatgttatcattttatgcaacctgcaagtcgtctccactatctttttgtcaattgatattcactgactgcgaccactgcaagtattgaaatcatactatgatgactctccaatacctgagacgtttccagaatacataaatgactcacaaacacaatgcaacacacattcaagctttgcagaatctaacagtctgacactttcccctcgtttgtcaaatcttccgtttaattttgagttgggtttcgtcaatacaagtgatacaggacacggttcatgaatatatctacttgaccacgaaacttgtctacatgtgaatctgatccttacaggacatgaaaagatccctgcaagtgcctactatgtttcccacagcgaataacacattattttaaaccatatttgtcaatttcacctttgcgtttttgtttcccattccgttgcctgaatgattctgttgtcctggagggggttgtttcttgtatccatgtgttttgcttgaacttcgtcatcgtgctaccagtagtctagacacaaagtttcgtaactgttctattttaaagtcactccctctctctgagctaacttagcgccgtgattctgtgagacctacatcttttcaataatttgatcccgatttgaattcactcttggtttgccgcaagtcacagtcacttgcttgcctgtctcagtcttatcaaaaaactgtgtctactgtttctttgtcggtttgtgtaattttcggaacagctaacgctctaatttgaacattcattgttattctcaatcaaatattttgtcatgcgttttcacagtcactgt
gi|7 : tgatatgtagGTTTCATTGGCTCAGGTTTACTAGGTT-GAC-CT---ACTA-T-TGACAACCAAAACATACTTTT--------GCAAAAC--TTCTCATACTTCTT-ATCCATCCCTGGCCACCAAACTTTGCTTCTTAATAGCGACTTCATGGCAACAATGCCTGGATGTCCTTCATGTGCAAG--A----TCAAGAACCCTATCA-CGCA-----TTTGTGGTG---GGAAT-AC-ATTCGCGTACCTT------GTAATACTAATTTCCCAATAGAAC--ACAATTCACCC--CT-TATTGGCAA-TACTGTTTGTAC-TCAAT----ACGAT-G---CCA-CTGTTG--ATTGA-CAGACATTGCTA-ACA-GCACAAAGCTCGGGGTCATTCT--CT-GATGTCTC--TCT---TATCTCACG--AGTTGTC----AT-AGCAAT-GGG-GAAGGTTGC------TTCTTCAGCTA-C-AA--CCT--AACA-TA-ATCATCTACCAG----ATCAGAAGACT--TCTG----CA-----------------CT-------AAA-T------CAT-TCCT-AACAAGACGTGAAA-GCGTGTCCGCT--ATAT-TCT-TCGGACC---TGAAATGTACCGAACC---------T--TAAAAGTGTGGGTTGCATGCGCAA----CA-------CCC-ATCGTTCTATTCTAGC-G-C-A----GACCTTTGACTTT--GTAG--AATAT-ATA-CA----TT-----CTA-----GC----GGTTTGTGGTCAGTGA-GAAG-----------C-TCAAACT-CTACACCGTATATATAAACATG--AAATCTTTCACATGCCCAT-ACGAGGGCTAGCGCCTCTT------T-CT------CAGTCTGA-GAGT-A-C----CG-A--------C-G-------T----------TCTGTATCACTCAAGCTACGGCTTG----C-ATAAGA-GATAACC-C----GAAATTC-A-----CC--G-----TCTTGTT---C------TT--GCACCAG-------CACGGCGCCTAA-TCCAACAGtctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttctgtgctacacgttgtaccgattcatcaatatggattttcacctgacgttcctttcattttcctatcctcggaacagtctggaaactcgtttcaacagtgtc
gi|8 : tttcgaccaaacagtaactgagacggacaaacaccagtcgtggtgtgtggggtatttcgatacataatcagaaatttgtcaagttcagatttccaatctcgaccttcggcatgagcaattcaaacacgtttcaaaattgacctattttatcgttccacctcgccgttcgcctgcggccataaaaggagtccattctggtgatgaagactattgccgttttctaacataaattctttaaaatttgactcgcaaattgaggaccattatcagtatgaattgaaaacagtagaccatgagtaaaaagaactttgacattaacgccatgatattctcagacgttgtttttgtaaactgccattcaaaatatctactgtaataattaactagtacaaaaatatactctttactcgcaatggacctaaaacgatcagggcaagatgtgccatggcgcagaaggtaattctgtgcACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCTGAGATT-CCAGT-CCCTCA-TGCTA-TAAGG--AATTCGGTAC-ATC--GCTT-GCGC---AA--CAAGTTTCACTTGTT---TGTCAATATGTAG-----C-TTCAACTT---AAA-----------A-GTCTTT-----CA-ATTTCCAAT-TCA------------------GGAAATTCTTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|9 : TTCA---TGATCCTTT---GAGGATTC--CTCGCGAAT-----G--TGTTGA-----A--GGCCTT-TGG-G----TTACATTGCGTTACCTC-CTC-CTAA--CAT--A-CA-GA-ATA--C---CGGCATTATT------CTCTTCTGACATCG---TTTCTGGACTTTCCCCTAGCATTAGAACA---G-TTTCGGCT---CAAGGCGAGACAAGCGCATCAGCGT-GCGTCTCT-AGGTCCT-AGT--AATGTAC---ACTAAACT----T--CAAACATGTC-ATGGC---TG-AAGGCCTAAGCTGT-CC--AGCGTTCGATTCTA---A-C-G----GGCG-GTTA-TTG--ATTG--TGGAT-AGA-TAGTAATTATATACCATGTAAGT----GGTATGTGATCTGTC-CAGAT-----------TCTCACACT-TAA-GCCATA-ACGTACATGTGGCAATTCTCTCGCAT--CTAA-ATTACCCACAGTGCTTCTC------T-CT---C-C--GTCTTGAGAAT-ACAGTTTCTCA--------C-A-------T----------TCA-----------------G-TAA----G-ATAG-C-GACAGCT-TAAATGAATTCCGA-----TC--ATGCATCTGTGTT---C------CTTGGGACCAGTACTTAGCA-----CCCAGAACTTACGGGCAACGCGCGTCGACTATGA-C--TC-T---GGT---TCCTT---A-TTATTGG-TTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT-TTCA---GC-TCGTTCGAATGCTC----CTCCCTTGCTGTTTG---GTCCATTCATCCAAG----C---T--C-A-C-GTTCTTCTTGG-CAA---------CTCGAAAGCGGACGCAGCTATTGTCGAAA-AATaacaatgctggtccttttccgttcaacacatagaatttccgcttcattccagtatagaaatctgtgttggaatttaccctagcaagcctaatgtgtcagtggcaccatacgcatacagtttcttgacatatttttgtgaatggctttcaaatgtttctttttcaactcgtccactattttttgtcaattatattcactgacgcacccatgtcaatgatgaaatcaacatgatgacctccaatactgacccgagtttccagatacatcaacactaacgcacacacatcatcagattcagaatctaacatctggactttccctcgtttgtcaaatttccgtttatttgatttgggtttcgtcatacaagtgatacaacacttcatgaaatatcctatctgaccacactttctacagttctgatcccttacaggacatgaaagatcccttgcaaagtgcccttgtttcccacagcgataacactttttaacatatttctcattctcacctttgcgtttttgtttcccattgttgccatgaattctgtttcctgacggtgctgtttctgtatccatgtgttttgcttgaacttctgtcatctctacagtagtctagacactatagttcgtaactgttctaattttaagtcctcccctctctcgagtaacttagcccgaattctgtgagacctacacttttcaataatttgatcccgaatttgttcatcttggtttgcgaagtcacagtacactgcttgctgtctcagtcttatcaaaaactgttctactgtttctttgtcggtttgtgtaattttccggaacactaacgctcatatggaacattcattttattctcaaaatatttgttcagcgttttcacagtcactgtatacacggtgtcatcctgtacactctgaacttcatttaacgtgtaataaatgtctt
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ATTAATTCTGTTCACTGACGGCGCTTTTTCTGTATCCATGTGCTTTGCATGAACGTCTGTCATTTGTACAGTAGGCGCTATGGTTCGTAACTGTTCTTATGATAAGTCCCTAACTTTCTCGAGTAACTTAGCCCTAACTTAATGAGACCAACAATTTTTCCCCCAATTTTTGCAAAGTCACAGTAAAACTGCTTGCTGTCTCATTCTTGTCTAAAATTGTTCTAAAGTTTCTCTCTCATTTTGAGTAATTTTCAAAATACATATATAATTGCTCATACGGAACATTCACTTTATTCGCAAAATATTTATTCAGTGTTTTCACAATCACTGTGTACACGGTGTTAACCCGTACGCTCTGAACTTCATTTAACGTATTGTAAACGTCT
Unaligned ( gi|13 ): TTTCGATTTGAAGAGTAATTCGGGCTGGACTTTTACCGGTCGTGGCTGGGAGTCGATCGATACGCAAGTAAAAATCTTGGGTTCCACCAGCGTGTATTCTTTTTTCCAGTCTCCCCTCAGCGTTTGGCTGTGCACTTTGAAGTAGAGCTTCAGATAATCGGAGATACAGATTTGGATGCTTTTGATGTCCCACATGGGGCCCTGGCTAGAGGGTGTTGTTTGTATTGTCTACTCCCGTTTATTCTAAGGTATTTTTGGAATTCTTCGGATACGAAACTTGCGGACCGTTATCA
Unaligned ( gi|14 ): AACATCTGAACATTCCCTCGCTTGTCAAATGTCCGTTTAGCTGATTTGGGCTTCGATATGCAACATTAACACTTCATGAAATGTCCTATCTGGTCATAGCTTTCTACAATTCTGATCCATGACTAGACATGAAAGATCCAAAGTGTCCTTATTTCCCACATCGACAACATTTTTACATTCTCACCTTTGCGTTTAGATTCCCCATTGTTTCCATGAC
Unaligned ( gi|16 ): TGTTTGATCCCATTTGTACGAGTAAATCTCTTGAATTCCTCTGAAGTGAACTGAGGTCCGTTGTCGCTGACCATAACACTAGGAACTCCATTCCTTGCAAATATGTTTCTAAGGACTTCAATAGTTTTG
Unaligned ( gi|18 ): ATTCTCACCTTTGCGTTTTTGTTTCCCATTGTTGCCATGAATTCTGTTTACTGACGGTGCTGTTTCTGTATCCATGTGTTTTGCTTGAACTTCTGTCATCTC
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111111 111 111 22222222 3333333 11111 222222222 111111 11 11 22222 11 1111 2222 2222 222222222222222 33333333 111111 111111 3333333333333333333333333333333333333333333333333 0000000000000000000000000000000000000000000000000 111 1 111 555555555 22222222222222222 11 2222222222222222 444444444444444444444444444444444444 22222222222 111 2222222222222 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1111 2222 1111111 222222222222222 1111111111 111 111111 111 11111111111111 11 11111111111 22222 1 111 1 4444444444444444444444 222222 444444444444444444444 666666666666666 111 111 222222 22222222 111 2222 1111 11 111 11 11111 11111111 44444444444444444444444444444 1111 1111 4444444 66666666666666666666666 33333 33333333 111 11 222 1 11 1 1111 11 1 1 11 1 11 22222 11 1111 1 1 1 1 11 1 11 1 1111111 111 22222222 555555555555555555555555555555555555555555555555555555555555555555555 11 1 7777777777777 222 2222 222 11
lowQualScore : 1 1 666666666 6 111 666 1 44444444 1 9999 6 1 3 22 1 2 22 88 4 0 1 0 5555555 1 99999 22222 666666666 4 5 0 11 1 0 666666 5 0 1 55 1 0 11 99 8 3 00000 8 11 7777 0 88 0 777 8 8 8 0 5 8 2222 0 1111 1 1 111111111111111 99 11111111 6 666666 999999 2222222222222222222222222222222222222222222222222 1111111111111111111111111111111111111111111111111 88 6 6 1 555 4 5 7 0 999999 1 0 000 222222222 77 11 5 1 1 77777777777777777 00 1 2 5555555555555555 555555555555555555555555555555555555 00000000000 777 8888888888888 5 1 55 6 3 1 888 1 88 66 11 1 5 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 2222 5 3333 4444444 5 777777777777777 1 1 5555555555 66 1 1 11 111 2 0 5 1 1 77 0 2 1 8888 777777 0 000 55555555555555 1 77 66 1 8 66666666666 55555 1 000 2 1111111111111111111111 0 444444 888888 333333333333333333333 1 1 333333333333333 1 666 1 11 0 1 5 2 99 1 6 3 0 1 111 999 222 1 0 1 333333 44444444 222 5555 1111 11 9 000 99 8 6 44 99999 9999 1 6 1 1 6 1 3 77777777 1 00000000000000000000000000000 22 999 1 99 7 9999 6 3 77 6 7777 99 1 4444 8 0 99 0 8 1 3 1111111 99999999999999999999999 8 1 33333 1 11111111 1 777 33 0 444 0 1 8 1 11 0 1 6 22 5 1 4 2 33 0 2 3 9 3333 11 1 33 0 0 0 1 0 1 1 33 4 0 11 55555 33 3 6 6 99 7 4444 7 99 3 3 3 3 88 3 88 3 9999999 0 777 3 55555555 3 555555555555555555555555555555555555555555555555555555555555555555555 33 0 0 0 3333333333333 333 7 8888 333 88
lowQualScore : . . ......... . ... ... . ........ . .... . . . .. . . .. .. . . . . ....... . ..... ..... ......... . . . .. . . ...... . . . .. . . .. .. . . ..... . .. .... . .. . ... . . . . . . .... . .... . . ............... .. ........ . ...... ...... ................................................. ................................................. .. . . . ... . . . . ...... . . ... ......... .. .. . . . ................. .. . . ................ .................................... ........... ... ............. . . .. . . . ... . .. .. .. . . ....................................................................................... . .... . .... ....... . ............... . . .......... .. . . .. ... . . . . . .. . . . .... ...... . ... .............. . .. .. . . ........... ..... . ... . ...................... . ...... ...... ..................... . . ............... . ... . .. . . . . .. . . . . . ... ... ... . . . ...... ........ ... .... .... .. . ... .. . . .. ..... .... . . . . . . . ........ . ............................. .. ... . .. . .... . . .. . .... .. . .... . . .. . . . . ....... ....................... . . ..... . ........ . ... .. . ... . . . . .. . . . .. . . . . .. . . . . .... .. . .. . . . . . . . .. . . .. ..... .. . . . .. . .... . .. . . . . .. . .. . ....... . ... . ........ . ..................................................................... .. . . . ............. ... . .... ... ..
lowQualScore : 0 0 888888888 7 777 000 0 22222222 0 3333 7 0 3 55 0 2 55 33 0 7 0 6 7777777 4 33333 44444 666666666 3 4 4 44 0 6 444444 0 6 7 77 3 8 00 00 0 2 00000 0 00 0000 8 88 8 000 0 0 0 8 0 0 4444 7 4444 0 0 888888888888888 22 22222222 7 222222 222222 5555555555555555555555555555555555555555555555555 0000000000000000000000000000000000000000000000000 33 7 7 0 333 0 7 1 7 777777 4 7 000 777777777 99 77 7 4 4 99999999999999999 00 3 7 3333333333333333 777777777777777777777777777777777777 11111111111 333 1111111111111 7 0 99 6 0 0 000 4 33 77 11 0 7 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 1111 7 7777 7777777 7 000000000000000 1 0 1111111111 99 0 0 44 111 4 2 0 0 1 99 4 7 4 9999 444444 7 000 66666666666666 9 99 77 0 9 66666666666 66666 4 000 4 3333333333333333333333 7 999999 333333 666666666666666666666 0 7 333333333333333 7 000 7 44 4 0 7 2 22 0 7 7 3 0 777 888 000 4 8 0 444444 22222222 444 6666 8888 00 6 888 00 8 0 22 99999 0000 0 3 0 0 7 5 5 77777777 0 88888888888888888888888888888 55 222 0 22 3 0000 7 7 33 7 8888 22 0 2222 0 8 44 8 0 4 2 0000000 00000000000000000000000 0 4 22222 4 66666666 0 000 22 6 888 6 0 0 0 55 8 0 5 88 0 2 2 5 22 0 5 2 2 2222 00 0 88 2 0 0 0 2 0 0 88 2 0 22 00000 88 2 7 7 22 3 2222 3 22 3 3 3 3 33 3 33 3 8888888 8 555 2 22222222 0 222222222222222222222222222222222222222222222222222222222222222222222 88 0 7 7 3333333333333 333 3 3333 333 33
consensus : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAAC-CC-AGACGTTTGTAAC-ATATAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTG---TTCGTCAATATGTA-----GC-TTCANCTTA--AA----C-TT-----CAGTCTTT----CA-ATTTCCCAT-C-------CA----NTC----------AGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
Reference ( family-2956 ) : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTN-GCA-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ACA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCTCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCAGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCCGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAAC-CC-AGACGTTTGTAAC-ATATAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTG---TTTGTCAATATGTA-----GC-TTCAACTTA--AAAG-TCTTT-----CAGTCTTT----CA-ATTTCCCAT-T-------CA----ATC----------AGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|1 : TCGGTTTTACTGGTTTTGGCTT----GCAG-GTGTCTGTCAGTAG-ATGACACTGACTACACGCTTTG--------ACAAA-T--ATCTC-TGCCTCCGTGTCCATTCCTGGCCACCATACCTTTTCTCTCAGTCGCTGTTTCGTACGTACAATTCCCTAGTGACCTTCGTGTGCCAG--AGAAATTGTA-----TTTTTTC-TAAGAAGTTT----TG---GCA-TCATAATACGAGTTCCACATACATGTAGCAC--AATGCCATCAACGACTGACAATTC--TGAATG-TAT-CCTGCGCAAC-----TCCGT--GTTTTGAAAATTG-TT--GTCTGT----CTTGATCCCAT-TTATGATGTCTG--TTA-TTTCA---TGATCCTTT---GAGGATTC-----------CTCGCGAATGTCGTG----AA-GGCTTT-GGGTA----CAGC------GTTCCTTGCAA-TAAA----------A-TA------CG--CAT----ATT------CA--TCTG----CGACGTTTCTGGAC--TTTCC-------CGT-TGAAAG--TT-G----GCCAAGGCGAGACA-GCGCATCAGCG--GCGT-TCTTAGGTCCT-AG---AATGTAC---ACTAAC------T--TAAACATGT-ATGGCTG-AAGCCT---AA-GTGTCC-AGCGTTCGATTCTA---A-C-GGGC----GGTTTTGATTTT--GGTGAAA-----ATA----T-A-----CCA-----GTAAGTGGTTTGTGATCTGTC-CAGAT-----------C-TCACACT-TAAGCCCATAAACGTACATGTG--GAATCTCTCGCATCTAAAT-ACTACCCCCAGTGCTTC-TCTCTC-C--GTCT---GA----G---------A-A-----T-A--------CAG-------T----------TT-------------------CTCGACATCAGTAA---GATAGCGAC----AGGCTTA-AATGATCC--A-----TCATTCTGTTT------TT--GGACCAGTAT--AGCACCCAGA-CCTACGGG--ACTCGCGTCGACTATGA-C--TC-T---GGT---TCCT---GA-TT-TTGGGTTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT--TCA---GC-TCG-TCGAA----TGCGTCCTC-TTGCTGTTTG---GTCCATCT--CCA-----------G-C-TCACGTTCTTCTTGGTCAA-C--------TCG--AGCGG-CGCAGCTATTGTCGAAA-AATTTGATATGAACC--GGGCACAGTA-GTTTGCAAGTCCAAGGAAACTCCGCA---CTTCCGAGCTGTTTGATGGTTTAC--GCGTCTC--G-GTT---A----CTACCTTGATTTTCTC-T--TCGTCC-GGCC--GTATTCC-C--TCTGCTGAGATTATGTGTCCGAGAAA-AACAATTTCTGATAG-ACCGAACTTGCACTTTTCACGGTTAAGCGTAAAACCCTTT-TGCA--TCAATCTAT---C-----TA-----GTAACTTTGAT--AGTTTTTCATCATGAT-TGGCCT--GGTCGGCG-CCATACA-CAACAATGTCGTCAGAGAGATTTCGTACTCCCTT-CA-GAC--CCTG----AATCACTTGACCAATGACT-CTTTGGTAT-ATTTC-GGACGCAGACGAAATTCCGAACATC-AGCCGTTTATAGCGATATAAACCGTCATGTGT-TGT-GAATGTTGT----AATTTCCCT---TGACTCCTCGTCAAGTTCAATTTGGTGATACCCCA--TCGA-AGGTCTAGTTTCGAAAAGACTTTACTTCCATTCATGTC-CTCTAGTATCTCGTCAACAGTTGGTATCGGATGACGCTTC-CGTCTTACTGCTAT--CTTTG-CGCGACGCATGTCGACACAGATTCGAATTT--CGTCATTTTTCTTC-----GAG--ACTACG-------------ACC-CATGC--TGACGGCTCATCAACTTT----TTCGATGATG--TCTT
gi|10 : ttttccgattgaagagtaattcggctggacttttaccggtcgtggcatgcggagtcgatcgatacgcaagtaaaaatttgggtaattcttttttccagtctcccctcagcgtttgcggctttgatggccttcagtagcgtgcgattttgacttccccgttcccctggggccaatagggtgttgtttgtatgtgtctaactcccgtttattctaaggtattctttgaattcttcggatacgaactgcggaccgttatcacaacgaatgctttgaggaataccgtgtctcacaaacattgcttccatctgtagaattatcctttcactggttatttttttaggatagctacttcttgatatcttgagaagtaatcgacgactaccagaaggttctctcccgagggaaatggtcccgtctcatcaaatcaatagccaaatcttgccacggtccatcgggcattggtgGCTCT---C------TT--GCGTCAGTAT--AGCCCCTAAG-CCAACAGG--GCTGGCGTCAACCACAACT--TC-GATAGGT---TTGTTCGG--------G-TTGTAATATGAAATTA-CGATAT--CGCTGGA-CAA-G---GTT-TTGA---GTTTT--TCAAA----C----CCACTTTCCTGCTCAGATGCCCATTG--CCAAT----C-GGTATC-CGA-A--CGTGTTAGACGG-C--G------A---AGCGG-TTCGCTCACAGTGGAAT-AGTCAGGTATTAACCTGGAGCAGTATGCGGTC---ATTCCCAGGAAGCTCCTGA---TTTCAtatcctctagctcgtctagcttcttgcgcattgctttcctgacgttgaacggtaaacgccttagaggttgagctactggcataacagcgtcatcaaggtgaattttcaggcgaaagtttttcagtttgcct
gi|11 : caattctaagcggaggtttggggcgtttccaaatgccaagtaaaggtttatgatcggtgaccacacggaagtgaggcgcacctctcaggtacatatcaaaatgttcgcaagcccagataatagctaacgcccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngatgtagcgcgattctggtccgctgagtgataggcttgcacaagcaacaactttTAATGTTGTTGGTTTGATAGGTTCTGGTTT--TGGAAATGCG-CT---GGTAATCTGACATCCATGACATAATTTC--------ACATA-T--TTCTC-CACGTCTTTGTCCATACCTGGCCACCAAACTTTATTTCTCAACTGCTGCGTAGTACCCACTAATCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATCCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTA--CGTAAT-GGTAAATAAT-----TAC-T--AT----AGGATTGATCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-AATTGGACAA-GTTCC---TCATCCTTCCTAGAAGCTctcgcattggagggacgttgcacgtcttgaatagcggacattttctcggggtacggcgagataccagctttactgaacactattccaaagaaggtgattcggtcagagttgaattcacatttgaacggttcagcattagtccat
gi|15 : ataacgactgaaatagtccaccaacaacaacatattgcctgtagtgttaacggccaagcagatctatcgctaaatcttgccgcaatccagttggTATCTC-AGTCTTCCGGAATTCACACTTGTCACGGTTCAGTTT-CAGTCC-TG---------AATC-CT---GGATTCTGC----GGAACACTG-TCAAGCCTGTCATCATGCTCCTTACG--GGTTT--T-CCATGAATCAA-GATATCATCAATGATAACCTCTACTCCC-T---CGATTCCATGTAGTAATT--CTGTCA
gi|17 : -AGACGCTTGTAAC-A-ATAAAT-GCCAAGTGTGTACTGAATGTAGTTATAAATCT-----G--GAGTTTGGGTGAAGCTCAAGTTGGTGAT-ATCCCCTGCGT-AGATCCAtctt
gi|19 : ttgCTGGGTGACCTTCGTGAGCTAA--T----TCCAAAACG-TGTGTTCGCAA-----TT----CAGTCGGAATAACAATTCGGGTCCCTC------GGAGAATTAGTTTTCCAATGCAAC--ACAATT
gi|2 : TAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAA--TTTTTA-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTC-GCA-TTGGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTC-TTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA----A----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAAC-C-------TTTGTA-----------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTG---TTTGTCAATATGTA-----GC-TTCAACTTA--AA--------------AGTCTTT----CA-ATTTCCCA-----------A----TTC----------AGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|3 : TCGGTTTTATCGGTTCCCGTT----------GCA-CG---TGT----TGTCACCATTGACATGTATTCATGCCTTGACAAA-TAATTTTC-AACTTCTGTGT---------GCCA--ATACTTTTTCGCGCAGCCGTTGTTTG------ACTATTCCTTGATGTCCCTCATGTGCAAGAAA----TTGTAT---CCTTCCTCATAG--ATTTT---------GGCATAAGTATTCGGGTTCCGC------GTAATAC--AATACCATCAAAAACTGAAAATTC
gi|3 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgTTCG---CGATCCTTT---GATGATTCCCTCC---AAACT-TCG--T--CGATTGTGAG-GGCTTTTGGA-A----CCGC------ATTCCTTGCAATC--A--TCT--G-CAATATGTC---T--CAC-----TT------TG--TCTG----C-----TTC---------------------A-T-----------TCTGACTAAGAAGTGGCA-AAGCATCAGCGGCAT-T-TTT-AGGTCCT-GGCG---TGTAT---ACTAGGACTAGCT--TGAACGTA--ATGGCTGTAG---TCGAAGCGT-AC--AGCGCTCAATCCTT-AC--C-GG-----TGGCTTCGATTTCGGCGAGAAA-----ATA----TATG----TCA-----GC----GGTTTGTGGTCCGTC-CAGAT-----------T-TCGAATT-CAAGCCCATAAACGTATATGTG--AAATCTCTCACA-GCCAAAGACTACTCCTAGTGCCCC-TCGCTCCGT-TTGT---GA----AT--------A------TT-GTTTCTCGAC-G-------TCGGTTAGAGATCT-----------------GCTTG----C-GTA----GGCA--A-C----GGGTTTA-A-----AC--GAT---CCGTCCC---CCTGTTTTT--GTGACATTAT--AGCTCACAGT-CCTACGGG--ACTCGAATCAACTATAA-TATTA-T---CCT---TGTTTCGGACTT-TCGG-TTGTA--ATAC-ACCAGTGTTT-----------CAA-A-----TCTTCAAACGCATC----------------CT--GGTGCCGTTTG---GTCCACTT--CCAAA----C---TG-C-A----TTCTTTCTAGTCAA-TTAA----CGC---AAAGG-TGCAGTAATCGTTGAGA-AATTCTGTATGAACC--GCCCACAATG-ATTCGCCAGTCCCAGGAAGCTTCGTA---CTTCAG---CACTATTTG-----TTGACTTG-C--GTGTTTCTGACACCGCT-TTGATCTTCTCG---TCGT-CCGGTCGACTATCACGTGTACG--GGA-AACACGATCCTCGTAAA---------------GTC--AAATTTACATTTTTCACGATTCAAAGT-AAGGCCTT--TCTTAACCAGTCTATCAAG-----TATTTTGGCAA-ACT---------TTTCATCATGAT-CTGCCT--GGTCTGTT-CCATAGA-CAACAATGTCATCGGAGAGATTCCGTACTCCT-T-CAAGAC--CTTG----GATCACTTGACAAATCACT-CGCTGATAGATCTATTAGA-GTTGGtgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacttcgcgatcctttgatgattccctccaaacttcgtcgattgtgagggcttttggaaccgcattccttgcaatcatctgcaatatgtctcactttgtctgcttcattctgactaagaagtggcaaagcatcagcggcatttttaggtcctggcgtgtatactaggactagcttgaacgtaatggctgtagtcgaagcgtacagcgctcaatccttaccggtggcttcgatttcggcgagaaaatatatgtcagcggtttgtggtccgtccagatttcgaattcaagcccataaacgtatatgtgaaatctctcacagccaaagactactcctagtgcccctcgctccgtttgtgaatattgtttctcgacgtcggttagagatctgcttgcgtaggcaacgggtttaaacgatccgtccccctgtttttgtgacattatagctcacagtcctacgggactcgaatcaactataatattatccttgtttcggactttcggttgtaatacaccagtgtttcaaatcttcaaacgcatcctggtgccgtttggtccacttccaaactgcattctttctagtcaattaacgcaaaggtgcagtaatcgttgagaaattctgtatgaaccgcccacaatgattcgccagtcccaggaagcttcgtacttcagcactatttgttgacttgcgtgtttctgacaccgctttgatcttctcgtcgtccggtcgactatcacgtgtacgggaaacacgatcctcgtaaagtcaaatttacatttttcacgattcaaagtaaggcctttcttaaccagtctatcaagtattttggcaaacttttcatcatgatctgcctggtctgttccatagacaacaatgtcatcggagagattccgtactccttcaagaccttggatcacttgacaaatcactcgctgatagatctattagagttgg
gi|4 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgtcggttttatcggttcccgttgcacgtgttgtcaccattgacatgtattcatgccttgacaaataattttcaacttctgtgtgccaatactttttcgcgcagccgttgtttgactattccttgatgtccctcatgtgcaagaaattgtatccttcctcatagattttggcataagtattcgggttccgcgtaatacaataccatcaaaaactgaaaattctgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacTAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAATTTTT--A-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTC-GCATT-GGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTCTTTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA----A----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAAC-C-------TTTGTA-----------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCT
gi|5 : ACGATGACTGGACTA-ACCTCATGG--TGTTTGATCATCGACTTTTCGGCTCGATAATGCTTCCTGAGATTTCCAGTTCCCTCAGTGCTAATAAAGGAAATTCGGTATGATTTGGCTTTGCGCTTGAAGGCAAGTTCTACTTGTTCTTTGTCAATA-ATAGATAGGCATTCACTTTAGTAAAGTTCTTTTTCTATATTTTTTTTGCCATATTTCTCATCT-------CAAAACACCTTATACAGATAGAAAATTA--TTGAATCAATGCCGTCCAGCCCTACGATTCTGTTTACAAGTATTAATCTCTTCAAGCTTC--AACACCCTAAAGGTCGCCATTGCGGGGTTATTCTTTCGCCC
gi|6 : TCTGCC--ATGT-TCT-CCTTCCCTGGTGCA---TAC---TTTA--------TGGTAAACTTAT-AGGGTTG-GAGAC---AAA-GT-CCCCATCTTTCAATGCGAAGTG-A-TGGAC-GCGTCTTC--TGCC-----AGAT-----AGT----T-T-----CCA-----GC----GGCTTGTGATCTGTAA-TGATAGTGGAAGTGGT-GCAAGCTGCTTAA--ATACAGATCAAAGTG--------CTCACAAGCCCAT-GTTATCGCTAAGGCTTC-TCGCTC-C--GTCT---GACTGTATCTCGACTCA-A----CT-G--------G-GGTAAGGGC----------TCT-----------------GCTTG----C-ATAG-C--ATAGTA-A----GCATGCC-A-----CTCTG-----TCATCGT---C------TT--GAAGCATAAT--GGCTCCCAAA-CCGACTGG--ACTTGCGTCTACTCTAA-T--TGTG---ACTGATTTCTGTGGA-TC-ATGA-T------ATGCTATGA-CATCATCAC---TGCACAG-GCT-GTCCTTCA---ACTTA--AGGAA---------------TGCT-TT------TTCACAC--CTAGAGTCCC-AATG-CCAGG-ATTTGTCTTTGTGAG-T--GAGTTCTCTG-AGAGG-T-TGATAAATGTCAGTATAGTTCTTTATGAAAC--GTGAACTGTA-GTGCGTACTTCCTCAGAATCTCCTAAAGTCTTTA---ACGTTCTGCGGCCTACTGAATTC-CTGG-ATT---G----CG---TTGACCTTTTCGGGGTCG----GGTG--ATAT-GC-CACTGTC-TGAAAACACA-ACACCGAAAAATGAAATCCT-GTTTGTTCTGAATTCACATTTATTACGGTTTACAGT-CAGGCCATGCTCCC--TCAGCCTTTCGAG-----TAC----TCTA---TG-T--AGTGCCTGGTCATG---CTGCTTAAGGTCTGTT-CCGAAAA-TCACAATATCATCGGATATGTTT-GTGGTACC-TGTATATT--CCTG----AATTAGCTGTCGAATAGTTTCGTGGA-AT-ATTTCTGAT-GCTGACG-TATACCGAAG-TTGAGACGCTTGTAAC-ATA--AAT-GCCAAGTGTGTAT-GAATGTAGTTATAAATCT-----G--GAGTTCTGGT-GAG-TCAAGTTGGTGAT--TTCCCTGCGGTAGATCCAGCTTGCTGAACACCTTGCT-CCGTTCAGGTC-CAATATAAGTTCCTCTATAGTAGG--TAGAGTG-TGTT---CG-------GCTGCTTATTGGCCTCC-CTCATATCAACACATAAGCGAATCTTCCTCCG-TT--CTTCTTAGTGGGTCACTA-------TGGGCGATACC-CATGGATTGGCTCACCATCGCC--T----CTCAATGATA--TCCTgcaatctaatgcttagagtgaccctatttcacgtaataactatacacatagacattacccgcggttgtacaatattttaccagtaataaataattttgaaaatatcatagaatcgtattgttgggaaattaattaacccttattagcaaagactcctaattgttgttcatgttggcaccacatagttacgcatttgagcaagtttctagacatcatatatttactgaataggagcattattccaaatgttatcattttatgcaacctgcaagtcgtctccactatctttttgtcaattgatattcactgactgcgaccactgcaagtattgaaatcatactatgatgactctccaatacctgagacgtttccagaatacataaatgactcacaaacacaatgcaacacacattcaagctttgcagaatctaacagtctgacactttcccctcgtttgtcaaatcttccgtttaattttgagttgggtttcgtcaatacaagtgatacaggacacggttcatgaatatatctacttgaccacgaaacttgtctacatgtgaatctgatccttacaggacatgaaaagatccctgcaagtgcctactatgtttcccacagcgaataacacattattttaaaccatatttgtcaatttcacctttgcgtttttgtttcccattccgttgcctgaatgattctgttgtcctggagggggttgtttcttgtatccatgtgttttgcttgaacttcgtcatcgtgctaccagtagtctagacacaaagtttcgtaactgttctattttaaagtcactccctctctctgagctaacttagcgccgtgattctgtgagacctacatcttttcaataatttgatcccgatttgaattcactcttggtttgccgcaagtcacagtcacttgcttgcctgtctcagtcttatcaaaaaactgtgtctactgtttctttgtcggtttgtgtaattttcggaacagctaacgctctaatttgaacattcattgttattctcaatcaaatattttgtcatgcgttttcacagtcactgt
gi|6 : tgatatgtagTGTGC---TA--CACGTTGTACCGA---TTCATCAATATGGA-----TT-TTCACCTGA--------CGTT-----C---CTTT----CA-TTTTCCTAT-CCTCGGAACA----GTC----------TGGAAACTCGTTTCAAC-AGTGTCtctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttctgtgctacacgttgtaccgattcatcaatatggattttcacctgacgttcctttcattttcctatcctcggaacagtctggaaactcgtttcaacagtgtc
gi|7 : tgatatgtagtctgccatgttctccttccctggtgcatactttatggtaaacttatagggttggagacaaagtccccatctttcaatgcgaagtgatggacgcgtcttctgccagatagtttccagcggcttgtgatctgtaatgatagtggaagtggtgcaagctgcttaaatacagatcaaagtgctcacaagcccatgttatcgctaaggcttctcgctccgtctgactgtatctcgactcaactggggtaagggctctgcttgcatagcatagtaagcatgccactctgtcatcgtcttgaagcataatggctcccaaaccgactggacttgcgtctactctaattgtgactgatttctgtggatcatgatatgctatgacatcatcactgcacaggctgtccttcaacttaaggaatgctttttcacacctagagtcccaatgccaggatttgtctttgtgagtgagttctctgagaggttgataaatgtcagtatagttctttatgaaacgtgaactgtagtgcgtacttcctcagaatctcctaaagtctttaacgttctgcggcctactgaattcctggattgcgttgaccttttcggggtcgggtgatatgccactgtctgaaaacacaacaccgaaaaatgaaatcctgtttgttctgaattcacatttattacggtttacagtcaggccatgctccctcagcctttcgagtactctatgtagtgcctggtcatgctgcttaaggtctgttccgaaaatcacaatatcatcggatatgtttgtggtacctgtatattcctgaattagctgtcgaatagtttcgtggaatatttctgatgctgacgtataccgaagttgagacgcttgtaacataaatgccaagtgtgtatgaatgtagttataaatctggagttctggtgagtcaagttggtgatttccctgcggtagatccagcttgctgaacaccttgctccgttcaggtccaatataagttcctctatagtaggtagagtgtgttcggctgcttattggcctccctcatatcaacacataagcgaatcttcctccgttcttcttagtgggtcactatgggcgatacccatggattggctcaccatcgcctctcaatgatatccttctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttcGTTTCATTGGCTCAGGTTTACTAGGTT-GAC-CT---ACTA-T-TGACAACCAAAACATACTTTT--------GCAAAAC--TTCTCATACTTCTT-ATCCATCCCTGGCCACCAAACTTTGCTTCTTAATAGCGACTTCATGGCAACAATGCCTGGATGTCCTTCATGTGCAAG--A----TCAAGAACCCTATCA-CGCA-----TTTGTGGTG---GGAAT-AC-ATTCGCGTACCTT------GTAATACTAATTTCCCAATAGAAC--ACAATTCACCC--CT-TATTGGCAA-TACTGTTTGTAC-TCAAT----ACGAT-G---CCA-CTGTTG--ATTGA-CAGACATTGCTA-ACA-GCACAAAGCTCGGGGTCATTCT--CT-GATGTCTC--TCT---TATCTCACG--AGTTGTC----AT-AGCAAT-GGG-GAAGGTTGC------TTCTTCAGCTA-C-AA--CCT--AACA-TA-ATCATCTACCAG----ATCAGAAGACT--TCTG----CA-----------------CT-------AAA-T------CAT-TCCT-AACAAGACGTGAAA-GCGTGTCCGCT--ATAT-TCT-TCGGACC---TGAAATGTACCGAACC---------T--TAAAAGTGT-G-GGTTGCATG-CGCAACA----CCC-ATCGTTCTATTCTA-GCG-C-AGACCTTTGACTT---------TGTAGAATATATACA----T-T-----CTA-----GC----GGTTTGTGGTCAGTGA-GAAG-----------C-TCAAACT-CTACACCGTATATATAAACATG--AAATCTTTCACATGCCCAT-ACGAGGGCTAGCGCCTC-TTTCTC---AGTCTGA-GA----GT--------A-C----CG-A--------C-G-------T----------TCTGTATCACTCAAGCTACGGCTTG----C-ATAAGA-GATAACC-C----GAAATTC-A-----CC--G-----TCTTGTT---C------TT--GCACCAGCAC--GGCGCCTAAT-CCAACAG
gi|8 : tttcgaccaaacagtaactgagacggacaaacaccagtcgtggtgtgtggggtatttcgatacataatcagaaatttgtcaagttcagatttccaatctcgaccttcggcatgagcaattcaaacacgtttcaaaattgacctattttatcgttccacctcgccgttcgcctgcggccataaaaggagtccattctggtgatgaagactattgccgttttctaacataaattctttaaaatttgactcgcaaattgaggaccattatcagtatgaattgaaaacagtagaccatgagtaaaaagaactttgacattaacgccatgatattctcagacgttgtttttgtaaactgccattcaaaatatctactgtaataattaactagtacaaaaatatactctttactcgcaatggacctaaaacgatcagggcaagatgtgccatggcgcagaaggtaattctgtgcACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTG---TTTGTCAATATGTA-----GC-TTCAACTTA--AA--------------AGTCTTT----CA-ATTTCCAAT----------------TC----------AGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|9 : TTCA---TGATCCTTT---GAGGATTC--CTCGCGAAT-----G--TGTTGA-----A--GGCCTT-TGG-G----TTACATTGCGTTACCTC-CTC-CTAA--CAT--A-CA-GA-ATA--C---CGGCATTATT------CTCTTCTGACATCG---TTTCTGGACTTTCCCCTAGCATTAGAACA---G-TTTCGGCT---CAAGGCGAGACAAGCGCATCAGCGT-GCGTCTCT-AGGTCCT-AGT--AATGTAC---ACTAAACT----T--CAAACATGTCATGGCTG-AAGGCCTAAGCTGT-CC--AGCGTTCGATTCTA---A-C-GGGCG-GTTA-TTG--ATTG--TGGATAG-----ATAGTAAT-TATATACCATGTAAGT----GGTATGTGATCTGTC-CAGAT-----------TCTCACACT-TAAG-CCATA-ACGTACATGTGGCAATTCTCTCGCAT--CTAA-ATTACCCACAGTGCTTC-TCTCTC-C--GTCTTGAGA----AT--------ACAGTTTCTCA--------C-A-------T----------TCA-----------------G-TAA----G-ATAG-C-GACAGCT-TAAATGAATTCCGA-----TC--ATGCATCTGTGTT---C------CTTGGGACCAGTACTTAGCACCCAGAACTTACGGGCAACGCGCGTCGACTATGA-C--TC-T---GGT---TCCTT---A-TTATTGG-TTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT-TTCA---GC-TCGTTCGAATGCTC----CTCCCTTGCTGTTTG---GTCCATTCATCCAAG----C---T--C-A-C-GTTCTTCTTGG-CAA---------CTCGAAAGCGGACGCAGCTATTGTCGAAA-AATaacaatgctggtccttttccgttcaacacatagaatttccgcttcattccagtatagaaatctgtgttggaatttaccctagcaagcctaatgtgtcagtggcaccatacgcatacagtttcttgacatatttttgtgaatggctttcaaatgtttctttttcaactcgtccactattttttgtcaattatattcactgacgcacccatgtcaatgatgaaatcaacatgatgacctccaatactgacccgagtttccagatacatcaacactaacgcacacacatcatcagattcagaatctaacatctggactttccctcgtttgtcaaatttccgtttatttgatttgggtttcgtcatacaagtgatacaacacttcatgaaatatcctatctgaccacactttctacagttctgatcccttacaggacatgaaagatcccttgcaaagtgcccttgtttcccacagcgataacactttttaacatatttctcattctcacctttgcgtttttgtttcccattgttgccatgaattctgtttcctgacggtgctgtttctgtatccatgtgttttgcttgaacttctgtcatctctacagtagtctagacactatagttcgtaactgttctaattttaagtcctcccctctctcgagtaacttagcccgaattctgtgagacctacacttttcaataatttgatcccgaatttgttcatcttggtttgcgaagtcacagtacactgcttgctgtctcagtcttatcaaaaactgttctactgtttctttgtcggtttgtgtaattttccggaacactaacgctcatatggaacattcattttattctcaaaatatttgttcagcgttttcacagtcactgtatacacggtgtcatcctgtacactctgaacttcatttaacgtgtaataaatgtctt
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ATTAATTCTGTTCACTGACGGCGCTTTTTCTGTATCCATGTGCTTTGCATGAACGTCTGTCATTTGTACAGTAGGCGCTATGGTTCGTAACTGTTCTTATGATAAGTCCCTAACTTTCTCGAGTAACTTAGCCCTAACTTAATGAGACCAACAATTTTTCCCCCAATTTTTGCAAAGTCACAGTAAAACTGCTTGCTGTCTCATTCTTGTCTAAAATTGTTCTAAAGTTTCTCTCTCATTTTGAGTAATTTTCAAAATACATATATAATTGCTCATACGGAACATTCACTTTATTCGCAAAATATTTATTCAGTGTTTTCACAATCACTGTGTACACGGTGTTAACCCGTACGCTCTGAACTTCATTTAACGTATTGTAAACGTCT
Unaligned ( gi|13 ): TTTCGATTTGAAGAGTAATTCGGGCTGGACTTTTACCGGTCGTGGCTGGGAGTCGATCGATACGCAAGTAAAAATCTTGGGTTCCACCAGCGTGTATTCTTTTTTCCAGTCTCCCCTCAGCGTTTGGCTGTGCACTTTGAAGTAGAGCTTCAGATAATCGGAGATACAGATTTGGATGCTTTTGATGTCCCACATGGGGCCCTGGCTAGAGGGTGTTGTTTGTATTGTCTACTCCCGTTTATTCTAAGGTATTTTTGGAATTCTTCGGATACGAAACTTGCGGACCGTTATCA
Unaligned ( gi|14 ): AACATCTGAACATTCCCTCGCTTGTCAAATGTCCGTTTAGCTGATTTGGGCTTCGATATGCAACATTAACACTTCATGAAATGTCCTATCTGGTCATAGCTTTCTACAATTCTGATCCATGACTAGACATGAAAGATCCAAAGTGTCCTTATTTCCCACATCGACAACATTTTTACATTCTCACCTTTGCGTTTAGATTCCCCATTGTTTCCATGAC
Unaligned ( gi|16 ): TGTTTGATCCCATTTGTACGAGTAAATCTCTTGAATTCCTCTGAAGTGAACTGAGGTCCGTTGTCGCTGACCATAACACTAGGAACTCCATTCCTTGCAAATATGTTTCTAAGGACTTCAATAGTTTTG
Unaligned ( gi|18 ): ATTCTCACCTTTGCGTTTTTGTTTCCCATTGTTGCCATGAATTCTGTTTACTGACGGTGCTGTTTCTGTATCCATGTGTTTTGCTTGAACTTCTGTCATCTC
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111111 111 111 22222222 3333333 11111 222222222 111111 11 11 22222 11 1111 2222 2222 222222222222222 33333333 111111 111111 3333333333333333333333333333333333333333333333333 0000000000000000000000000000000000000000000000000 111 1 111 555555555 22222222222222222 11 44444444444444444444444444444444444444444444444444444 22222222222 111 2222222222222 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1111 2222 1111111 222222222222222 1111111111 111 111111 111 11111111111111 11 11111111111 22222 1 111 1 4444444444444444444444 222222 444444444444444444444 666666666666666 111 111 222222 22222222 111 2222 1111 11 111 11 11111 11111111 44444444444444444444444444444 1111 1111 33333333 66666666666666666666666 33333 33333333 111 11 222 1 11 1 1111 11 1 1 11 1 11 22222 11 1111 1 1 1 1 11 1 11 1 1111111 111 22222222 222222222222222222222222222222222222222222222222222222222222222 11 1 7777777777777 222 2222 222 11
lowQualScore : 1 1 666666666 6 111 666 1 44444444 1 9999 6 1 3 22 1 2 22 88 4 0 1 0 5555555 1 99999 22222 666666666 4 5 0 11 1 0 666666 5 0 1 55 1 0 11 99 8 3 00000 8 11 7777 0 88 0 777 8 8 8 0 5 8 2222 0 1111 1 1 111111111111111 99 11111111 6 666666 999999 2222222222222222222222222222222222222222222222222 1111111111111111111111111111111111111111111111111 88 6 6 1 555 4 5 7 0 999999 1 0 000 222222222 77 11 5 1 1 77777777777777777 00 1 2 77 66666666666666666666666666666666666666666666666666666 00000000000 777 8888888888888 5 1 55 6 3 1 888 1 88 66 11 1 5 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 2222 5 3333 4444444 5 777777777777777 1 1 5555555555 66 1 1 11 111 1 0 5 1 1 77 0 2 1 8888 777777 0 000 55555555555555 1 77 66 1 8 66666666666 55555 1 000 2 1111111111111111111111 0 444444 888888 333333333333333333333 1 1 333333333333333 1 666 1 1 11 0 1 5 2 99 1 6 3 0 1 111 999 222 1 0 1 333333 44444444 222 5555 1111 11 9 000 99 8 6 44 99999 9999 1 7 1 1 6 1 3 77777777 1 00000000000000000000000000000 22 999 1 99 7 9999 6 3 77 6 7777 99 1 4444 8 0 99 0 8 1 3 99999999 99999999999999999999999 8 1 33333 1 11111111 1 777 33 0 444 0 1 8 1 11 0 1 6 22 5 1 4 2 33 0 2 3 9 3333 11 1 33 0 0 0 1 0 1 1 33 4 0 11 55555 33 3 6 6 99 7 4444 7 99 3 3 3 3 88 3 88 3 9999999 0 777 3 55555555 1 222222222222222222222222222222222222222222222222222222222222222 33 0 0 0 3333333333333 333 7 8888 333 88
lowQualScore : . . ......... . ... ... . ........ . .... . . . .. . . .. .. . . . . ....... . ..... ..... ......... . . . .. . . ...... . . . .. . . .. .. . . ..... . .. .... . .. . ... . . . . . . .... . .... . . ............... .. ........ . ...... ...... ................................................. ................................................. .. . . . ... . . . . ...... . . ... ......... .. .. . . . ................. .. . . .. ..................................................... ........... ... ............. . . .. . . . ... . .. .. .. . . ....................................................................................... . .... . .... ....... . ............... . . .......... .. . . .. ... . . . . . .. . . . .... ...... . ... .............. . .. .. . . ........... ..... . ... . ...................... . ...... ...... ..................... . . ............... . ... . . .. . . . . .. . . . . . ... ... ... . . . ...... ........ ... .... .... .. . ... .. . . .. ..... .... . . . . . . . ........ . ............................. .. ... . .. . .... . . .. . .... .. . .... . . .. . . . . ........ ....................... . . ..... . ........ . ... .. . ... . . . . .. . . . .. . . . . .. . . . . .... .. . .. . . . . . . . .. . . .. ..... .. . . . .. . .... . .. . . . . .. . .. . ....... . ... . ........ . ............................................................... .. . . . ............. ... . .... ... ..
lowQualScore : 0 0 888888888 7 777 000 0 22222222 0 3333 7 0 3 55 0 2 55 33 0 7 0 6 7777777 4 33333 44444 666666666 3 4 4 44 0 6 444444 0 6 7 77 3 8 00 00 0 2 00000 0 00 0000 8 88 8 000 0 0 0 8 0 0 4444 7 4444 0 0 888888888888888 22 22222222 7 222222 222222 5555555555555555555555555555555555555555555555555 0000000000000000000000000000000000000000000000000 33 7 7 0 333 0 7 1 7 777777 4 7 000 777777777 99 77 7 4 4 99999999999999999 00 3 7 33 66666666666666666666666666666666666666666666666666666 11111111111 333 1111111111111 7 0 99 6 0 0 000 4 33 77 11 0 7 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 1111 7 7777 7777777 7 000000000000000 1 0 1111111111 99 0 0 44 111 0 2 0 0 1 99 4 7 4 9999 444444 7 000 66666666666666 9 99 77 0 9 66666666666 66666 4 000 4 3333333333333333333333 7 999999 333333 666666666666666666666 0 7 333333333333333 7 000 4 7 44 4 0 7 2 22 0 7 7 3 0 777 888 000 4 8 0 444444 22222222 444 6666 8888 00 6 888 00 8 0 22 99999 0000 0 2 0 0 7 5 5 77777777 0 88888888888888888888888888888 55 222 0 22 3 0000 7 7 33 7 8888 22 0 2222 0 8 44 8 0 4 2 22222222 00000000000000000000000 0 4 22222 4 66666666 0 000 22 6 888 6 0 0 0 55 8 0 5 88 0 2 2 5 22 0 5 2 2 2222 00 0 88 2 0 0 0 2 0 0 88 2 0 22 00000 88 2 7 7 22 3 2222 3 22 3 3 3 3 33 3 33 3 8888888 8 555 2 22222222 0 000000000000000000000000000000000000000000000000000000000000000 88 0 7 7 3333333333333 333 3 3333 333 33
consensus : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAA-C-C-AGACGTTTGTAAC-A-ATAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCT---TAAA--TTC---------AGTCTTT----CA-ATTTCCCATCCC-GGA---------CAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
Reference ( family-2956 ) : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAA-C-CCAGACGTTTGTAAC-ATATAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCT---TAAAC-TTC---------AGTCTTT----CA-ATTTCCCATC---------------CANTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|1 : TCGGTTTTACTGGTTTTGGCTT----GCAG-GTGTCTGTCAGTAG-ATGACACTGACTACACGCTTTG--------ACAAA-T--ATCTC-TGCCTCCGTGTCCATTCCTGGCCACCATACCTTTTCTCTCAGTCGCTGTTTCGTACGTACAATTCCCTAGTGACCTTCGTGTGCCAG--AGAAATTGTA-----TTTTTTC-TAAGAAGTTT----TG---GCA-TCATAATACGAGTTCCACATACATGTAGCAC--AATGCCATCAACGACTGACAATTC--TGAATG-TAT-CCTGCGCAAC-----TCCGT--GTTTTGAAAATTG-TT--GTCTGT----CTTGATCCCAT-TTATGATGTCTG--TTA-TTTCA---TGATCCTTT---GAGGATTC-----------CTCGCGAATGTCGTG----AA-GGCTTT-GGGTA----CAGC------GTTCCTTGCAA-TAAA----------A-TA------CG--CAT----ATT------CA--TCTG----CGACGTTTCTGGAC--TTTCC-------CGT-TGAAAG--TT-G----GCCAAGGCGAGACA-GCGCATCAGCG--GCGT-TCTTAGGTCCT-AG---AATGTAC---ACTAAC------T--TAAACATGT-ATGGCTG-AAGCCT---AA-GTGTCC-AGCGTTCGATTCTA-ACG----GGC----GGTTTTGATTTT--GGTGAAA-----ATA----T-A-----CCA-----GTAAGTGGTTTGTGATCTGTC-CAGAT-----------C-TCACACT-TAAGCCCATAAACGTACATGTG--GAATCTCTCGCATCTAAAT-ACTACCCCCAGTGCTTC-TCTCTC-C--GTCT---GA----G---------A-A-----T-A--------CAG-------T----------TT-------------------CTCGACATCAGTAA---GATAGCGAC----AGGCTTA-AATGATCC--A-----TCATTCTGTTT------TT--GGACCAGTAT--AGCACCCAGA-CCTACGGG--ACTCGCGTCGACTATGA-C--TC-T---GGT---TCCT---GA-TT-TTGGGTTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT--TCA---GC-TCG-TCGAA----TGCGTCCTC-TTGCTGTTTG---GTCCATCT--CCA-----------G-C-TCACGTTCTTCTTGGTCAA-C--------TCG--AGCGG-CGCAGCTATTGTCGAAA-AATTTGATATGAACC--GGGCACAGTA-GTTTGCAAGTCCAAGGAAACTCCGCA---CTTCCGAGCTGTTTGATGGTTTAC--GCGTCTC--G-GTT---A----CTACCTTGATTTTCTC-T--TCGTCC-GGCC--GTATTCC-C--TCTGCTGAGATTATGTGTCCGAGAAA-AACAATTTCTGATAGACC-GAACTTGCACTTTTCACGGTTAAGCGTAAAACCCTTT-TGCA--TCAATCTAT---C-----TA-----GTAACTTTGAT--AGTTTTTCATCATGAT-TGGCCT--GGTCGGCG-CCATACA-CAACAATGTCGTCAGAGAGATTTCGTACTCCCTT-CA-GAC--CCTG----AATCACTTGACCAATGACT-CTTTGGTAT-ATTTC-GGACGCAGACGAAATTCCGAA-CATCAGCCGTTTATAGCGATATAAACCGTCATGTGT-TGT-GAATGTTGT----AATTTCCCT---TGACTCCTCGTCAAGTTCAATTTGGTGATACCCCA--TCGA-AGGTCTAGTTTCGAAAAGACTTTACTTCCATTCATGTC-CTCTAGTATCTCGTCAACAGTTGGTATCGGATGACGCTTC-CGTCTTACTGCTAT--CTTTG-CGCGACGCATGTCGACACAGATTCGAATTT--CGTCATTTTTCTTC-----GAG--ACTACG-------------ACC-CATGC--TGACGGCTCATCAACTTT----TTCGATGATG--TCTT
gi|10 : ttttccgattgaagagtaattcggctggacttttaccggtcgtggcatgcggagtcgatcgatacgcaagtaaaaatttgggtaattcttttttccagtctcccctcagcgtttgcggctttgatggccttcagtagcgtgcgattttgacttccccgttcccctggggccaatagggtgttgtttgtatgtgtctaactcccgtttattctaaggtattctttgaattcttcggatacgaactgcggaccgttatcacaacgaatgctttgaggaataccgtgtctcacaaacattgcttccatctgtagaattatcctttcactggttatttttttaggatagctacttcttgatatcttgagaagtaatcgacgactaccagaaggttctctcccgagggaaatggtcccgtctcatcaaatcaatagccaaatcttgccacggtccatcgggcattggtgGCTCT---C------TT--GCGTCAGTAT--AGCCCCTAAG-CCAACAGG--GCTGGCGTCAACCACAACT--TC-GATAGGT---TTGTTCGG--------G-TTGTAATATGAAATTA-CGATAT--CGCTGGA-CAA-G---GTT-TTGA---GTTTT--TCAAA----C----CCACTTTCCTGCTCAGATGCCCATTG--CCAAT----C-GGTATC-CGA-A--CGTGTTAGACGG-C--G------A---AGCGG-TTCGCTCACAGTGGAAT-AGTCAGGTATTAACCTGGAGCAGTATGCGGTC---ATTCCCAGGAAGCTCCTGA---TTTCAtatcctctagctcgtctagcttcttgcgcattgctttcctgacgttgaacggtaaacgccttagaggttgagctactggcataacagcgtcatcaaggtgaattttcaggcgaaagtttttcagtttgcct
gi|11 : caattctaagcggaggtttggggcgtttccaaatgccaagtaaaggtttatgatcggtgaccacacggaagtgaggcgcacctctcaggtacatatcaaaatgttcgcaagcccagataatagctaacgcccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngatgtagcgcgattctggtccgctgagtgataggcttgcacaagcaacaactttTAATGTTGTTGGTTTGATAGGTTCTGGTTT--TGGAAATGCG-CT---GGTAATCTGACATCCATGACATAATTTC--------ACATA-T--TTCTC-CACGTCTTTGTCCATACCTGGCCACCAAACTTTATTTCTCAACTGCTGCGTAGTACCCACTAATCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATCCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTA--CGTAAT-GGTAAATAAT-----TAC-T--AT----AGGATTGATCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-AATTGGACAA-GTTCC---TCATCCTTCCTAGAAGCTctcgcattggagggacgttgcacgtcttgaatagcggacattttctcggggtacggcgagataccagctttactgaacactattccaaagaaggtgattcggtcagagttgaattcacatttgaacggttcagcattagtccat
gi|15 : ataacgactgaaatagtccaccaacaacaacatattgcctgtagtgttaacggccaagcagatctatcgctaaatcttgccgcaatccagttggTATCTC-AGTCTTCCGGAATTCACACTTGTCACGGTTCAGTTT-CAGTCC-TG---------AATC-CT---GGATTCTGC----GGAACACTG-TCAAGCCTGTCATCATGCTCCTTACG--GGTTT--T-CCATGAATCAA-GATATCATCAATGATAACCTCTACTCCC-T---CGATTCCATGTAGTAATT--CTGTCA
gi|17 : AGACGCTTGTAAC-A-ATAAAT-GCCAAGTGTGTACTGAATGTAGTTATAAATCT-----G--GAGTTTGGGTGAAGCTCAAGTTGGTGAT-ATCCCCTGCGT-AGATCCAtctt
gi|19 : ttgCTGGGTGACCTTCGTGAGCTAA--T----TCCAAAACG-TGTGTTCGCAA-----TT----CAGTCGGAATAACAATTCGGGTCCCTC------GGAGAATTAGTTTTCCAATGCAAC--ACAATT
gi|2 : TAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAA--TTTTTA-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTC-GCA-TTGGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTC-TTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA----A----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAA-C-C------TTTGTA-----------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTT---GTCAATATGTA-----GC-TTCAACT---TAAA--------------AGTCTTT----CA-ATTTCCCA------------------ATTCAGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|3 : TCGGTTTTATCGGTTCCCGTT----------GCA-CG---TGT----TGTCACCATTGACATGTATTCATGCCTTGACAAA-TAATTTTC-AACTTCTGTGT---------GCCA--ATACTTTTTCGCGCAGCCGTTGTTTG------ACTATTCCTTGATGTCCCTCATGTGCAAGAAA----TTGTAT---CCTTCCTCATAG--ATTTT---------GGCATAAGTATTCGGGTTCCGC------GTAATAC--AATACCATCAAAAACTGAAAATTC
gi|3 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgTTCG---CGATCCTTT---GATGATTCCCTCC---AAACT-TCG--T--CGATTGTGAG-GGCTTTTGGA-A----CCGC------ATTCCTTGCAATC--A--TCT--G-CAATATGTC---T--CAC-----TT------TG--TCTG----C-----TTC---------------------A-T-----------TCTGACTAAGAAGTGGCA-AAGCATCAGCGGCAT-T-TTT-AGGTCCT-GGCG---TGTAT---ACTAGGACTAGCT--TGAACGTA--ATGGCTGTAG---TCGAAGCGT-AC--AGCGCTCAATCCTT-AC--C-GG-----TGGCTTCGATTTCGGCGAGAAA-----ATA----TATG----TCA-----GC----GGTTTGTGGTCCGTC-CAGAT-----------T-TCGAATT-CAAGCCCATAAACGTATATGTG--AAATCTCTCACA-GCCAAAGACTACTCCTAGTGCCCC-TCGCTCCGT-TTGT---GA----AT--------A------TT-GTTTCTCGAC-G-------TCGGTTAGAGATCT-----------------GCTTG----C-GTA----GGCA--A-C----GGGTTTA-A-----AC--GAT---CCGTCCC---CCTGTTTTT--GTGACATTAT--AGCTCACAGT-CCTACGGG--ACTCGAATCAACTATAA-TATTA-T---CCT---TGTTTCGGACTT-TCGG-TTGTA--ATAC-ACCAGTGTTT-----------CAA-A-----TCTTCAAACGCATC----------------CT--GGTGCCGTTTG---GTCCACTT--CCAAA----C---TG-C-A----TTCTTTCTAGTCAA-TTAA----CGC---AAAGG-TGCAGTAATCGTTGAGA-AATTCTGTATGAACC--GCCCACAATG-ATTCGCCAGTCCCAGGAAGCTTCGTA---CTTCAG---CACTATTTG-----TTGACTTG-C--GTGTTTCTGACACCGCT-TTGATCTTCTCG---TCGT-CCGGTCGACTATCACGTGTACG--GGA-AACACGATCCTCGTAAA---------------GTC--AAATTTACATTTTTCACGATTCAAAGT-AAGGCCTT--TCTTAACCAGTCTATCAAG-----TATTTTGGCAA-ACT---------TTTCATCATGAT-CTGCCT--GGTCTGTT-CCATAGA-CAACAATGTCATCGGAGAGATTCCGTACTCCT-T-CAAGAC--CTTG----GATCACTTGACAAATCACT-CGCTGATAGATCTATTAGA-GTTGGtgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacttcgcgatcctttgatgattccctccaaacttcgtcgattgtgagggcttttggaaccgcattccttgcaatcatctgcaatatgtctcactttgtctgcttcattctgactaagaagtggcaaagcatcagcggcatttttaggtcctggcgtgtatactaggactagcttgaacgtaatggctgtagtcgaagcgtacagcgctcaatccttaccggtggcttcgatttcggcgagaaaatatatgtcagcggtttgtggtccgtccagatttcgaattcaagcccataaacgtatatgtgaaatctctcacagccaaagactactcctagtgcccctcgctccgtttgtgaatattgtttctcgacgtcggttagagatctgcttgcgtaggcaacgggtttaaacgatccgtccccctgtttttgtgacattatagctcacagtcctacgggactcgaatcaactataatattatccttgtttcggactttcggttgtaatacaccagtgtttcaaatcttcaaacgcatcctggtgccgtttggtccacttccaaactgcattctttctagtcaattaacgcaaaggtgcagtaatcgttgagaaattctgtatgaaccgcccacaatgattcgccagtcccaggaagcttcgtacttcagcactatttgttgacttgcgtgtttctgacaccgctttgatcttctcgtcgtccggtcgactatcacgtgtacgggaaacacgatcctcgtaaagtcaaatttacatttttcacgattcaaagtaaggcctttcttaaccagtctatcaagtattttggcaaacttttcatcatgatctgcctggtctgttccatagacaacaatgtcatcggagagattccgtactccttcaagaccttggatcacttgacaaatcactcgctgatagatctattagagttgg
gi|4 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgtcggttttatcggttcccgttgcacgtgttgtcaccattgacatgtattcatgccttgacaaataattttcaacttctgtgtgccaatactttttcgcgcagccgttgtttgactattccttgatgtccctcatgtgcaagaaattgtatccttcctcatagattttggcataagtattcgggttccgcgtaatacaataccatcaaaaactgaaaattctgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacTAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAATTTTT--A-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTC-GCATT-GGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTCTTTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA----A----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAA-C-C------TTTGTA-----------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCT
gi|5 : ACGATGACTGGACTA-ACCTCATGG--TGTTTGATCATCGACTTTTCGGCTCGATAATGCTTCCTGAGATTTCCAGTTCCCTCAGTGCTAATAAAGGAAATTCGGTATGATTTGGCTTTGCGCTTGAAGGCAAGTTCTACTTGTTCTTTGTCAATA-ATAGATAGGCATTCACTTTAGTAAAG-TTCTTTTTCTATATTTTTTTTGCCATATTTCTCATCTCAAAACACCTTATACAGATAGAAAATTA--TTGAATCAATGCCGTCCAGCCCTACGATTCTGTTTACAAGTATTAATCTCTTCAAGCTTC--AACACCCTAAAGGTCGCCATTGCGGGGTTATTCTTTCGCCC
gi|6 : TCTGCC--ATGT-TCT-CCTTCCCTGGTGCA---TAC---TTTA--------TGGTAAACTTAT-AGGGTTG-GAGAC---AAA-GT-CCCCATCTTTCAATGCGAAGTG-A-TGGAC-GCGTCTTC--TGCC-----AGAT-----AGT----T-T-----CCA-----GC----GGCTTGTGATCTGTAA-TGATAGTGGAAGTGGT-GCAAGCTGCTTAA--ATACAGATCAAAGTG--------CTCACAAGCCCAT-GTTATCGCTAAGGCTTC-TCGCTC-C--GTCT---GACTGTATCTCGACTCA-A----CT-G--------G-GGTAAGGGC----------TCT-----------------GCTTG----C-ATAG-C--ATAGTA-A----GCATGCC-A-----CTCTG-----TCATCGT---C------TT--GAAGCATAAT--GGCTCCCAAA-CCGACTGG--ACTTGCGTCTACTCTAA-T--TGTG---ACTGATTTCTGTGGA-TC-ATGA-T------ATGCTATGA-CATCATCAC---TGCACAG-GCT-GTCCTTCA---ACTTA--AGGAA---------------TGCT-TT------TTCACAC--CTAGAGTCCC-AATG-CCAGG-ATTTGTCTTTGTGAG-T--GAGTTCTCTG-AGAGG-T-TGATAAATGTCAGTATAGTTCTTTATGAAAC--GTGAACTGTA-GTGCGTACTTCCTCAGAATCTCCTAAAGTCTTTA---ACGTTCTGCGGCCTACTGAATTC-CTGG-ATT---G----CG---TTGACCTTTTCGGGGTCG----GGTG--ATAT-GC-CACTGTC-TGAAAACACA-ACACCGAAAAATGAAATCCT-GTTTGTTCTGAATTCACATTTATTACGGTTTACAGT-CAGGCCATGCTCCC--TCAGCCTTTCGAG-----TAC----TCTA---TG-T--AGTGCCTGGTCATG---CTGCTTAAGGTCTGTT-CCGAAAA-TCACAATATCATCGGATATGTTT-GTGGTACC-TGTATATT--CCTG----AATTAGCTGTCGAATAGTTTCGTGGA-AT-ATTTCTGAT-GCTGACG-TATACCGAAGT-TGAGACGCTTGTAAC---ATAAAT-GCCAAGTGTGTAT-GAATGTAGTTATAAATCT-----G--GAGTTCTGGT-GAG-TCAAGTTGGTGAT--TTCCCTGCGGTAGATCCAGCTTGCTGAACACCTTGCT-CCGTTCAGGTC-CAATATAAGTTCCTCTATAGTAGG--TAGAGTG-TGTT---CG-------GCTGCTTATTGGCCTCC-CTCATATCAACACATAAGCGAATCTTCCTCCG-TT--CTTCTTAGTGGGTCACTA-------TGGGCGATACC-CATGGATTGGCTCACCATCGCC--T----CTCAATGATA--TCCTgcaatctaatgcttagagtgaccctatttcacgtaataactatacacatagacattacccgcggttgtacaatattttaccagtaataaataattttgaaaatatcatagaatcgtattgttgggaaattaattaacccttattagcaaagactcctaattgttgttcatgttggcaccacatagttacgcatttgagcaagtttctagacatcatatatttactgaataggagcattattccaaatgttatcattttatgcaacctgcaagtcgtctccactatctttttgtcaattgatattcactgactgcgaccactgcaagtattgaaatcatactatgatgactctccaatacctgagacgtttccagaatacataaatgactcacaaacacaatgcaacacacattcaagctttgcagaatctaacagtctgacactttcccctcgtttgtcaaatcttccgtttaattttgagttgggtttcgtcaatacaagtgatacaggacacggttcatgaatatatctacttgaccacgaaacttgtctacatgtgaatctgatccttacaggacatgaaaagatccctgcaagtgcctactatgtttcccacagcgaataacacattattttaaaccatatttgtcaatttcacctttgcgtttttgtttcccattccgttgcctgaatgattctgttgtcctggagggggttgtttcttgtatccatgtgttttgcttgaacttcgtcatcgtgctaccagtagtctagacacaaagtttcgtaactgttctattttaaagtcactccctctctctgagctaacttagcgccgtgattctgtgagacctacatcttttcaataatttgatcccgatttgaattcactcttggtttgccgcaagtcacagtcacttgcttgcctgtctcagtcttatcaaaaaactgtgtctactgtttctttgtcggtttgtgtaattttcggaacagctaacgctctaatttgaacattcattgttattctcaatcaaatattttgtcatgcgttttcacagtcactgt
gi|6 : tgatatgtagTGTGC---TA--CACGTTGTACCGATTC---ATCAATATGGA-----TT-TTCACCT-----GACGTTC------------CTTT----CA-TTTTCCTATCCTCGGAA--------CAGTCTGGAAACTCGTTTCAAC-AGTGTCtctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttctgtgctacacgttgtaccgattcatcaatatggattttcacctgacgttcctttcattttcctatcctcggaacagtctggaaactcgtttcaacagtgtc
gi|7 : tgatatgtagtctgccatgttctccttccctggtgcatactttatggtaaacttatagggttggagacaaagtccccatctttcaatgcgaagtgatggacgcgtcttctgccagatagtttccagcggcttgtgatctgtaatgatagtggaagtggtgcaagctgcttaaatacagatcaaagtgctcacaagcccatgttatcgctaaggcttctcgctccgtctgactgtatctcgactcaactggggtaagggctctgcttgcatagcatagtaagcatgccactctgtcatcgtcttgaagcataatggctcccaaaccgactggacttgcgtctactctaattgtgactgatttctgtggatcatgatatgctatgacatcatcactgcacaggctgtccttcaacttaaggaatgctttttcacacctagagtcccaatgccaggatttgtctttgtgagtgagttctctgagaggttgataaatgtcagtatagttctttatgaaacgtgaactgtagtgcgtacttcctcagaatctcctaaagtctttaacgttctgcggcctactgaattcctggattgcgttgaccttttcggggtcgggtgatatgccactgtctgaaaacacaacaccgaaaaatgaaatcctgtttgttctgaattcacatttattacggtttacagtcaggccatgctccctcagcctttcgagtactctatgtagtgcctggtcatgctgcttaaggtctgttccgaaaatcacaatatcatcggatatgtttgtggtacctgtatattcctgaattagctgtcgaatagtttcgtggaatatttctgatgctgacgtataccgaagttgagacgcttgtaacataaatgccaagtgtgtatgaatgtagttataaatctggagttctggtgagtcaagttggtgatttccctgcggtagatccagcttgctgaacaccttgctccgttcaggtccaatataagttcctctatagtaggtagagtgtgttcggctgcttattggcctccctcatatcaacacataagcgaatcttcctccgttcttcttagtgggtcactatgggcgatacccatggattggctcaccatcgcctctcaatgatatccttctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttcGTTTCATTGGCTCAGGTTTACTAGGTT-GAC-CT---ACTA-T-TGACAACCAAAACATACTTTT--------GCAAAAC--TTCTCATACTTCTT-ATCCATCCCTGGCCACCAAACTTTGCTTCTTAATAGCGACTTCATGGCAACAATGCCTGGATGTCCTTCATGTGCAAG--A----TCAAGAACCCTATCA-CGCA-----TTTGTGGTG---GGAAT-AC-ATTCGCGTACCTT------GTAATACTAATTTCCCAATAGAAC--ACAATTCACCC--CT-TATTGGCAA-TACTGTTTGTAC-TCAAT----ACGAT-G---CCA-CTGTTG--ATTGA-CAGACATTGCTA-ACA-GCACAAAGCTCGGGGTCATTCT--CT-GATGTCTC--TCT---TATCTCACG--AGTTGTC----AT-AGCAAT-GGG-GAAGGTTGC------TTCTTCAGCTA-C-AA--CCT--AACA-TA-ATCATCTACCAG----ATCAGAAGACT--TCTG----CA-----------------CT-------AAA-T------CAT-TCCT-AACAAGACGTGAAA-GCGTGTCCGCT--ATAT-TCT-TCGGACC---TGAAATGTACCGAACC---------T--TAAAAGTGT-G-GGTTGCATG-CGCAACA----CCC-ATCGTTCTATTCTA-GCG-C-AGACCTTTGACTT---------TGTAGAATATATACA----T-T-----CTA-----GC----GGTTTGTGGTCAGTGA-GAAG-----------C-TCAAACT-CTACACCGTATATATAAACATG--AAATCTTTCACATGCCCAT-ACGAGGGCTAGCGCCTC-TTTCTC---AGTCTGA-GA----GT--------A-C----CG-A--------C-G-------T----------TCTGTATCACTCAAGCTACGGCTTG----C-ATAAGA-GATAACC-C----GAAATTC-A-----CC--G-----TCTTGTT---C------TT--GCACCAGCAC--GGCGCCTAAT-CCAACAG
gi|8 : tttcgaccaaacagtaactgagacggacaaacaccagtcgtggtgtgtggggtatttcgatacataatcagaaatttgtcaagttcagatttccaatctcgaccttcggcatgagcaattcaaacacgtttcaaaattgacctattttatcgttccacctcgccgttcgcctgcggccataaaaggagtccattctggtgatgaagactattgccgttttctaacataaattctttaaaatttgactcgcaaattgaggaccattatcagtatgaattgaaaacagtagaccatgagtaaaaagaactttgacattaacgccatgatattctcagacgttgtttttgtaaactgccattcaaaatatctactgtaataattaactagtacaaaaatatactctttactcgcaatggacctaaaacgatcagggcaagatgtgccatggcgcagaaggtaattctgtgcACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTT---GTCAATATGTA-----GC-TTCAACT---TAAA--------------AGTCTTT----CA-ATTTCCAAT-------------------TCAGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|9 : TTCA---TGATCCTTT---GAGGATTC--CTCGCGAAT-----G--TGTTGA-----A--GGCCTT-TGG-G----TTACATTGCGTTACCTC-CTC-CTAA--CAT--A-CA-GA-ATA--C---CGGCATTATT------CTCTTCTGACATCG---TTTCTGGACTTTCCCCTAGCATTAGAACA---G-TTTCGGCT---CAAGGCGAGACAAGCGCATCAGCGT-GCGTCTCT-AGGTCCT-AGT--AATGTAC---ACTAAACT----T--CAAACATGTCATGGCTG-AAGGCCTAAGCTGT-CC--AGCGTTCGATTCTA-ACG----GGCG-GTTA-TTG--ATTG--TGGATAG-----ATAGTAAT-TATATACCATGTAAGT----GGTATGTGATCTGTC-CAGAT-----------TCTCACACT-TAAG-CCATA-ACGTACATGTGGCAATTCTCTCGCAT--CTAA-ATTACCCACAGTGCTTC-TCTCTC-C--GTCTTGAGA----AT--------ACAGTTTCTCA--------C-A-------T----------TCA-----------------G-TAA----G-ATAG-C-GACAGCT-TAAATGAATTCCGA-----TC--ATGCATCTGTGTT---C------CTTGGGACCAGTACTTAGCACCCAGAACTTACGGGCAACGCGCGTCGACTATGA-C--TC-T---GGT---TCCTT---A-TTATTGG-TTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT-TTCA---GC-TCGTTCGAATGCTC----CTCCCTTGCTGTTTG---GTCCATTCATCCAAG----C---T--C-A-C-GTTCTTCTTGG-CAA---------CTCGAAAGCGGACGCAGCTATTGTCGAAA-AATaacaatgctggtccttttccgttcaacacatagaatttccgcttcattccagtatagaaatctgtgttggaatttaccctagcaagcctaatgtgtcagtggcaccatacgcatacagtttcttgacatatttttgtgaatggctttcaaatgtttctttttcaactcgtccactattttttgtcaattatattcactgacgcacccatgtcaatgatgaaatcaacatgatgacctccaatactgacccgagtttccagatacatcaacactaacgcacacacatcatcagattcagaatctaacatctggactttccctcgtttgtcaaatttccgtttatttgatttgggtttcgtcatacaagtgatacaacacttcatgaaatatcctatctgaccacactttctacagttctgatcccttacaggacatgaaagatcccttgcaaagtgcccttgtttcccacagcgataacactttttaacatatttctcattctcacctttgcgtttttgtttcccattgttgccatgaattctgtttcctgacggtgctgtttctgtatccatgtgttttgcttgaacttctgtcatctctacagtagtctagacactatagttcgtaactgttctaattttaagtcctcccctctctcgagtaacttagcccgaattctgtgagacctacacttttcaataatttgatcccgaatttgttcatcttggtttgcgaagtcacagtacactgcttgctgtctcagtcttatcaaaaactgttctactgtttctttgtcggtttgtgtaattttccggaacactaacgctcatatggaacattcattttattctcaaaatatttgttcagcgttttcacagtcactgtatacacggtgtcatcctgtacactctgaacttcatttaacgtgtaataaatgtctt
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ATTAATTCTGTTCACTGACGGCGCTTTTTCTGTATCCATGTGCTTTGCATGAACGTCTGTCATTTGTACAGTAGGCGCTATGGTTCGTAACTGTTCTTATGATAAGTCCCTAACTTTCTCGAGTAACTTAGCCCTAACTTAATGAGACCAACAATTTTTCCCCCAATTTTTGCAAAGTCACAGTAAAACTGCTTGCTGTCTCATTCTTGTCTAAAATTGTTCTAAAGTTTCTCTCTCATTTTGAGTAATTTTCAAAATACATATATAATTGCTCATACGGAACATTCACTTTATTCGCAAAATATTTATTCAGTGTTTTCACAATCACTGTGTACACGGTGTTAACCCGTACGCTCTGAACTTCATTTAACGTATTGTAAACGTCT
Unaligned ( gi|13 ): TTTCGATTTGAAGAGTAATTCGGGCTGGACTTTTACCGGTCGTGGCTGGGAGTCGATCGATACGCAAGTAAAAATCTTGGGTTCCACCAGCGTGTATTCTTTTTTCCAGTCTCCCCTCAGCGTTTGGCTGTGCACTTTGAAGTAGAGCTTCAGATAATCGGAGATACAGATTTGGATGCTTTTGATGTCCCACATGGGGCCCTGGCTAGAGGGTGTTGTTTGTATTGTCTACTCCCGTTTATTCTAAGGTATTTTTGGAATTCTTCGGATACGAAACTTGCGGACCGTTATCA
Unaligned ( gi|14 ): AACATCTGAACATTCCCTCGCTTGTCAAATGTCCGTTTAGCTGATTTGGGCTTCGATATGCAACATTAACACTTCATGAAATGTCCTATCTGGTCATAGCTTTCTACAATTCTGATCCATGACTAGACATGAAAGATCCAAAGTGTCCTTATTTCCCACATCGACAACATTTTTACATTCTCACCTTTGCGTTTAGATTCCCCATTGTTTCCATGAC
Unaligned ( gi|16 ): TGTTTGATCCCATTTGTACGAGTAAATCTCTTGAATTCCTCTGAAGTGAACTGAGGTCCGTTGTCGCTGACCATAACACTAGGAACTCCATTCCTTGCAAATATGTTTCTAAGGACTTCAATAGTTTTG
Unaligned ( gi|18 ): ATTCTCACCTTTGCGTTTTTGTTTCCCATTGTTGCCATGAATTCTGTTTACTGACGGTGCTGTTTCTGTATCCATGTGTTTTGCTTGAACTTCTGTCATCTC
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111
lowQualScore : 111111111 111 111 22222222 3333333 11111 222222222 111111 11 11 22222 11 1111 2222 2222 222222222222222 33333333 111111 111111 3333333333333333333333333333333333333333333333333 0000000000000000000000000000000000000000000000000 111 1 111 555555555 22222222222222222 11 44444444444444444444444444444444444444444444444444444 22222222222 111 2222222222222 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1111 2222 1111111 222222222222222 1111111111 111 111111 111 11111111111 11 11111111111 22222 1 111 1 4444444444444444444444 222222 444444444444444444444 666666666666666 111 111 222222 22222222 111 2222 1111 11 111 11 11111 11111111 44444444444444444444444444444 1111 1111 33333333 55555555555555555555555 33333 33333333 111 11 222 1 11 1 1111 11 1 1 11 1 11 22222 11 1111 1 1 1 1 11 1 11 1 1111111 111 22222222 777777777777777777777 2222 1 0000000000000000000 11 1 7777777777777 222 2222 222 11
lowQualScore : 1 1 666666666 6 111 666 1 44444444 1 9999 6 1 3 22 1 2 22 88 4 0 1 0 5555555 1 99999 22222 666666666 4 5 0 11 1 0 666666 5 0 1 55 1 0 11 99 8 3 00000 8 11 7777 0 88 0 777 8 8 8 0 5 8 2222 0 1111 1 1 111111111111111 99 11111111 6 666666 999999 2222222222222222222222222222222222222222222222222 1111111111111111111111111111111111111111111111111 88 6 6 1 555 4 5 7 0 999999 1 0 000 222222222 77 11 5 1 1 77777777777777777 00 1 2 77 66666666666666666666666666666666666666666666666666666 00000000000 777 8888888888888 5 1 55 6 3 1 888 1 88 66 11 1 5 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 2222 5 3333 4444444 5 777777777777777 1 1 5555555555 66 1 1 11 111 1 0 5 1 1 77 0 2 1 8888 777777 0 000 55555555555 5 1 77 66 1 8 66666666666 55555 1 000 2 1111111111111111111111 0 444444 888888 333333333333333333333 1 1 333333333333333 1 666 1 1 11 0 1 5 2 99 1 6 3 0 1 111 999 222 1 0 1 333333 44444444 222 5555 1111 11 9 000 99 8 6 44 99999 9999 1 7 1 1 6 1 3 77777777 1 00000000000000000000000000000 22 999 1 99 7 9999 6 3 77 6 7777 99 1 4444 8 0 99 0 8 1 3 44444444 99999999999999999999999 8 1 33333 1 11111111 1 777 33 0 444 0 1 8 1 11 0 1 6 22 5 1 4 2 33 0 2 3 9 3333 11 1 33 0 0 0 1 0 1 1 33 4 0 11 55555 33 3 6 6 99 7 4444 7 99 3 3 3 3 88 3 88 3 9999999 0 777 3 55555555 1 444444444444444444444 1111 0 0 3333333333333333333 2 33 0 0 0 3333333333333 333 7 8888 333 88
lowQualScore : . . ......... . ... ... . ........ . .... . . . .. . . .. .. . . . . ....... . ..... ..... ......... . . . .. . . ...... . . . .. . . .. .. . . ..... . .. .... . .. . ... . . . . . . .... . .... . . ............... .. ........ . ...... ...... ................................................. ................................................. .. . . . ... . . . . ...... . . ... ......... .. .. . . . ................. .. . . .. ..................................................... ........... ... ............. . . .. . . . ... . .. .. .. . . ....................................................................................... . .... . .... ....... . ............... . . .......... .. . . .. ... . . . . . .. . . . .... ...... . ... ........... . . .. .. . . ........... ..... . ... . ...................... . ...... ...... ..................... . . ............... . ... . . .. . . . . .. . . . . . ... ... ... . . . ...... ........ ... .... .... .. . ... .. . . .. ..... .... . . . . . . . ........ . ............................. .. ... . .. . .... . . .. . .... .. . .... . . .. . . . . ........ ....................... . . ..... . ........ . ... .. . ... . . . . .. . . . .. . . . . .. . . . . .... .. . .. . . . . . . . .. . . .. ..... .. . . . .. . .... . .. . . . . .. . .. . ....... . ... . ........ . ..................... .... . . ................... . .. . . . ............. ... . .... ... ..
lowQualScore : 0 0 888888888 7 777 000 0 22222222 0 3333 7 0 3 55 0 2 55 33 0 7 0 6 7777777 4 33333 44444 666666666 3 4 4 44 0 6 444444 0 6 7 77 3 8 00 00 0 2 00000 0 00 0000 8 88 8 000 0 0 0 8 0 0 4444 7 4444 0 0 888888888888888 22 22222222 7 222222 222222 5555555555555555555555555555555555555555555555555 0000000000000000000000000000000000000000000000000 33 7 7 0 333 0 7 1 7 777777 4 7 000 777777777 99 77 7 4 4 99999999999999999 00 3 7 33 66666666666666666666666666666666666666666666666666666 11111111111 333 1111111111111 7 0 99 6 0 0 000 4 33 77 11 0 7 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 1111 7 7777 7777777 7 000000000000000 1 0 1111111111 99 0 0 44 111 0 2 0 0 1 99 4 7 4 9999 444444 7 000 99999999999 7 9 99 77 0 9 66666666666 66666 4 000 4 3333333333333333333333 7 999999 333333 666666666666666666666 0 7 333333333333333 7 000 4 7 44 4 0 7 2 22 0 7 7 3 0 777 888 000 4 8 0 444444 22222222 444 6666 8888 00 6 888 00 8 0 22 99999 0000 0 2 0 0 7 5 5 77777777 0 88888888888888888888888888888 55 222 0 22 3 0000 7 7 33 7 8888 22 0 2222 0 8 44 8 0 4 2 88888888 88888888888888888888888 0 4 22222 4 66666666 0 000 22 6 888 6 0 0 0 55 8 0 5 88 0 2 2 5 22 0 5 2 2 2222 00 0 88 2 0 0 0 2 0 0 88 2 0 22 00000 88 2 7 7 22 3 2222 3 22 3 3 3 3 33 3 33 3 8888888 8 555 2 22222222 0 555555555555555555555 2222 0 2 2222222222222222222 5 88 0 7 7 3333333333333 333 3 3333 333 33
consensus : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAAC--C--AGACGTTTGTAACG--ATAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCTT----AAGTTC---------AGTCTTT----CA-ATTTCCCATCC-CGGA---------ACAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
Reference ( family-2956 ) : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAAC--C--AGACGTTTGTAACA--ATAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCTT----AAATTC---------AGTCTTT----CA-ATTTCCCATCC-CGG----------ACAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|1 : TCGGTTTTACTGGTTTTGGCTT----GCAG-GTGTCTGTCAGTAG-ATGACACTGACTACACGCTTTG--------ACAAA-T--ATCTC-TGCCTCCGTGTCCATTCCTGGCCACCATACCTTTTCTCTCAGTCGCTGTTTCGTACGTACAATTCCCTAGTGACCTTCGTGTGCCAG--AGAAATTGTA-----TTTTTTC-TAAGAAGTTT----TG---GCA-TCATAATACGAGTTCCACATACATGTAGCAC--AATGCCATCAACGACTGACAATTC--TGAATG-TAT-CCTGCGCAAC-----TCCGT--GTTTTGAAAATTG-TT--GTCTGT----CTTGATCCCAT-TTATGATGTCTG--TTA-TTTCA---TGATCCTTT---GAGGATTC-----------CTCGCGAATGTCGTG----AA-GGCTTT-GGGTA----CAGC------GTTCCTTGCAA-TAAA----------A-TA------CG--CAT----ATT------CA--TCTG----CGACGTTTCTGGAC--TTTCC-------CGT-TGAAAG--TT-G----GCCAAGGCGAGACA-GCGCATCAGCG--GCGT-TCTTAGGTCCT-AG---AATGTAC---ACTAAC------T--TAAACATGT-ATGGCTG-AAGCCT---AA-GTGTCC-AGCGTTCGATTCTA-ACG----GGC----GGTTTTGATTTT--GGTGAAA-----ATA----T-A-----CCA-----GTAAGTGGTTTGTGATCTGTC-CAGAT-----------C-TCACACT-TAAGCCCATAAACGTACATGTG--GAATCTCTCGCATCTAAAT-ACTACCCCCAGTGCTTC-TCTCTC-C--GTCT---GA----G---------A-A-----T-A--------CAG-------T----------TT-------------------CTCGACATCAGTAA---GATAGCGAC----AGGCTTA-AATGATCC--A-----TCATTCTGTTT------TT--GGACCAGTAT--AGCACCCAGA-CCTACGGG--ACTCGCGTCGACTATGA-C--TC-T---GGT---TCCT---GA-TT-TTGGGTTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT--TCA---GC-TCG-TCGAA----TGCGTCCTC-TTGCTGTTTG---GTCCATCT--CCA-----------G-C-TCACGTTCTTCTTGGTCAA-C--------TCG--AGCGG-CGCAGCTATTGTCGAAA-AATTTGATATGAACC--GGGCACAGTA-GTTTGCAAGTCCAAGGAAACTCCGCA---CTTCCGAGCTGTTTGATGGTTTAC--GCGTCTC--G-GTT---A----CTACCTTGATTTTCTC-T--TCGTCC-GGCC--GTATTCC-C--TCTGCTGAGATTATGTGTCCGAGAAA-AACAATTTCTGATAGACC-GAACTTGCACTTTTCACGGTTAAGCGTAAAACCCTTT-TGCA--TCAATCTAT---C-----TA-----GTAACTTTGAT--AGTTTTTCATCATGAT-TGGCCT--GGTCGGCG-CCATACA-CAACAATGTCGTCAGAGAGATTTCGTACTCCCTT-CA-GAC--CCTG----AATCACTTGACCAATGACT-CTTTGGTAT-ATTTC-GGACGCAGACGAAATTCCGAACATC--AGCCGTTTATAGCGATATAAACCGTCATGTGT-TGT-GAATGTTGT----AATTTCCCT---TGACTCCTCGTCAAGTTCAATTTGGTGATACCCCA--TCGA-AGGTCTAGTTTCGAAAAGACTTTACTTCCATTCATGTC-CTCTAGTATCTCGTCAACAGTTGGTATCGGATGACGCTTC-CGTCTTACTGCTAT--CTTTG-CGCGACGCATGTCGACACAGATTCGAATTT--CGTCATTTTTCTTC-----GAG--ACTACG-------------ACC-CATGC--TGACGGCTCATCAACTTT----TTCGATGATG--TCTT
gi|10 : ttttccgattgaagagtaattcggctggacttttaccggtcgtggcatgcggagtcgatcgatacgcaagtaaaaatttgggtaattcttttttccagtctcccctcagcgtttgcggctttgatggccttcagtagcgtgcgattttgacttccccgttcccctggggccaatagggtgttgtttgtatgtgtctaactcccgtttattctaaggtattctttgaattcttcggatacgaactgcggaccgttatcacaacgaatgctttgaggaataccgtgtctcacaaacattgcttccatctgtagaattatcctttcactggttatttttttaggatagctacttcttgatatcttgagaagtaatcgacgactaccagaaggttctctcccgagggaaatggtcccgtctcatcaaatcaatagccaaatcttgccacggtccatcgggcattggtgGCTCT---C------TT--GCGTCAGTAT--AGCCCCTAAG-CCAACAGG--GCTGGCGTCAACCACAACT--TC-GATAGGT---TTGTTCG--------GG-TTGTAATATGAAATTA-CGATAT--CGCTGGA-CAA-G---GTT-TTGA---GTTTT--TCAAA----C----CCACTTTCCTGCTCAGATGCCCATTG--CCAAT----C-GGTATC-CGA-A--CGTGTTAGACGG-C--G------A---AGCGG-TTCGCTCACAGTGGAAT-AGTCAGGTATTAACCTGGAGCAGTATGCGGTC---ATTCCCAGGAAGCTCCTGA---TTTCAtatcctctagctcgtctagcttcttgcgcattgctttcctgacgttgaacggtaaacgccttagaggttgagctactggcataacagcgtcatcaaggtgaattttcaggcgaaagtttttcagtttgcct
gi|11 : caattctaagcggaggtttggggcgtttccaaatgccaagtaaaggtttatgatcggtgaccacacggaagtgaggcgcacctctcaggtacatatcaaaatgttcgcaagcccagataatagctaacgcccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngatgtagcgcgattctggtccgctgagtgataggcttgcacaagcaacaactttTAATGTTGTTGGTTTGATAGGTTCTGGTTT--TGGAAATGCG-CT---GGTAATCTGACATCCATGACATAATTTC--------ACATA-T--TTCTC-CACGTCTTTGTCCATACCTGGCCACCAAACTTTATTTCTCAACTGCTGCGTAGTACCCACTAATCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATCCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTA--CGTAAT-GGTAAATAAT-----TAC-T--AT----AGGATTGATCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-AATTGGACAA-GTTCC---TCATCCTTCCTAGAAGCTctcgcattggagggacgttgcacgtcttgaatagcggacattttctcggggtacggcgagataccagctttactgaacactattccaaagaaggtgattcggtcagagttgaattcacatttgaacggttcagcattagtccat
gi|15 : ataacgactgaaatagtccaccaacaacaacatattgcctgtagtgttaacggccaagcagatctatcgctaaatcttgccgcaatccagttggTATCTC-AGTCTTCCGGAATTCACACTTGTCACGGTTCAGTTT-CAGTCC-TG---------AATC-CT---GGATTCTGC----GGAACACTG-TCAAGCCTGTCATCATGCTCCTTACG--GGTTT--T-CCATGAATCAA-GATATCATCAATGATAACCTCTACTCCC-T---CGATTCCATGTAGTAATT--CTGTCA
gi|17 : --AGACGCTTGTAACA--ATAAAT-GCCAAGTGTGTACTGAATGTAGTTATAAATCT-----G--GAGTTTGGGTGAAGCTCAAGTTGGTGAT-ATCCCCTGCGT-AGATCCAtctt
gi|19 : ttgCTGGGTGACCTTCGTGAGCTAA--T----TCCAAAACG-TGTGTTCGCAA-----TT----CAGTCGGAATAACAATTCGGGTCCCTC------GGAGAATTAGTTTTCCAATGCAAC--ACAATT
gi|2 : TAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAA--TTTTTA-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTC-GCA-TTGGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTC-TTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA----A----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAAC--C-------TTTGTA-----------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTT---GTCAATATGTA-----GC-TTCAACTT----AAA------------AGTCTTT----CA-ATTTCCCA-------------------ATTCAGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|3 : TCGGTTTTATCGGTTCCCGTT----------GCA-CG---TGT----TGTCACCATTGACATGTATTCATGCCTTGACAAA-TAATTTTC-AACTTCTGTGT---------GCCA--ATACTTTTTCGCGCAGCCGTTGTTTG------ACTATTCCTTGATGTCCCTCATGTGCAAGAAA----TTGTAT---CCTTCCTCATAG--ATTTT---------GGCATAAGTATTCGGGTTCCGC------GTAATAC--AATACCATCAAAAACTGAAAATTC
gi|3 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgTTCG---CGATCCTTT---GATGATTCCCTCC---AAACT-TCG--T--CGATTGTGAG-GGCTTTTGGA-A----CCGC------ATTCCTTGCAATC--A--TCT--G-CAATATGTC---T--CAC-----TT------TG--TCTG----C-----TTC---------------------A-T-----------TCTGACTAAGAAGTGGCA-AAGCATCAGCGGCAT-T-TTT-AGGTCCT-GGCG---TGTAT---ACTAGGACTAGCT--TGAACGTA--ATGGCTGTAG---TCGAAGCGT-AC--AGCGCTCAATCCTT-AC--C-GG-----TGGCTTCGATTTCGGCGAGAAA-----ATA----TATG----TCA-----GC----GGTTTGTGGTCCGTC-CAGAT-----------T-TCGAATT-CAAGCCCATAAACGTATATGTG--AAATCTCTCACA-GCCAAAGACTACTCCTAGTGCCCC-TCGCTCCGT-TTGT---GA----AT--------A------TT-GTTTCTCGAC-G-------TCGGTTAGAGATCT-----------------GCTTG----C-GTA----GGCA--A-C----GGGTTTA-A-----AC--GAT---CCGTCCC---CCTGTTTTT--GTGACATTAT--AGCTCACAGT-CCTACGGG--ACTCGAATCAACTATAA-TATTA-T---CCT---TGTTTCGGACTT-TCGG-TTGTA--ATAC-ACCAGTGTTT-----------CAA-A-----TCTTCAAACGCATC----------------CT--GGTGCCGTTTG---GTCCACTT--CCAAA----C---TG-C-A----TTCTTTCTAGTCAA-TTAA----CGC---AAAGG-TGCAGTAATCGTTGAGA-AATTCTGTATGAACC--GCCCACAATG-ATTCGCCAGTCCCAGGAAGCTTCGTA---CTTCAG---CACTATTTG-----TTGACTTG-C--GTGTTTCTGACACCGCT-TTGATCTTCTCG---TCGT-CCGGTCGACTATCACGTGTACG--GGA-AACACGATCCTCGTAAA---------------GTC--AAATTTACATTTTTCACGATTCAAAGT-AAGGCCTT--TCTTAACCAGTCTATCAAG-----TATTTTGGCAA-ACT---------TTTCATCATGAT-CTGCCT--GGTCTGTT-CCATAGA-CAACAATGTCATCGGAGAGATTCCGTACTCCT-T-CAAGAC--CTTG----GATCACTTGACAAATCACT-CGCTGATAGATCTATTAGA-GTTGGtgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacttcgcgatcctttgatgattccctccaaacttcgtcgattgtgagggcttttggaaccgcattccttgcaatcatctgcaatatgtctcactttgtctgcttcattctgactaagaagtggcaaagcatcagcggcatttttaggtcctggcgtgtatactaggactagcttgaacgtaatggctgtagtcgaagcgtacagcgctcaatccttaccggtggcttcgatttcggcgagaaaatatatgtcagcggtttgtggtccgtccagatttcgaattcaagcccataaacgtatatgtgaaatctctcacagccaaagactactcctagtgcccctcgctccgtttgtgaatattgtttctcgacgtcggttagagatctgcttgcgtaggcaacgggtttaaacgatccgtccccctgtttttgtgacattatagctcacagtcctacgggactcgaatcaactataatattatccttgtttcggactttcggttgtaatacaccagtgtttcaaatcttcaaacgcatcctggtgccgtttggtccacttccaaactgcattctttctagtcaattaacgcaaaggtgcagtaatcgttgagaaattctgtatgaaccgcccacaatgattcgccagtcccaggaagcttcgtacttcagcactatttgttgacttgcgtgtttctgacaccgctttgatcttctcgtcgtccggtcgactatcacgtgtacgggaaacacgatcctcgtaaagtcaaatttacatttttcacgattcaaagtaaggcctttcttaaccagtctatcaagtattttggcaaacttttcatcatgatctgcctggtctgttccatagacaacaatgtcatcggagagattccgtactccttcaagaccttggatcacttgacaaatcactcgctgatagatctattagagttgg
gi|4 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgtcggttttatcggttcccgttgcacgtgttgtcaccattgacatgtattcatgccttgacaaataattttcaacttctgtgtgccaatactttttcgcgcagccgttgtttgactattccttgatgtccctcatgtgcaagaaattgtatccttcctcatagattttggcataagtattcgggttccgcgtaatacaataccatcaaaaactgaaaattctgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacTAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAATTTTT--A-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTC-GCATT-GGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTCTTTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA----A----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAAC--C-------TTTGTA-----------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCT
gi|5 : ACGATGACTGGACTA-ACCTCATGG--TGTTTGATCATCGACTTTTCGGCTCGATAATGCTTCCTGAGATTTCCAGTTCCCTCAGTGCTAATAAAGGAAATTCGGTATGATTTGGCTTTGCGCTTGAAGGCAAGTTCTACTTGTTCTTTGTCAATA-ATAGATAGGCATTCACTTTAGTAAAGTTCTTTTTCTATATTTTTTTTGCCATATTTCTCATCT-CAAAACACCTTATACAGATAGAAAATTA--TTGAATCAATGCCGTCCAGCCCTACGATTCTGTTTACAAGTATTAATCTCTTCAAGCTTC--AACACCCTAAAGGTCGCCATTGCGGGGTTATTCTTTCGCCC
gi|6 : TCTGCC--ATGT-TCT-CCTTCCCTGGTGCA---TAC---TTTA--------TGGTAAACTTAT-AGGGTTG-GAGAC---AAA-GT-CCCCATCTTTCAATGCGAAGTG-A-TGGAC-GCGTCTTC--TGCC-----AGAT-----AGT----T-T-----CCA-----GC----GGCTTGTGATCTGTAA-TGATAGTGGAAGTGGT-GCAAGCTGCTTAA--ATACAGATCAAAGTG--------CTCACAAGCCCAT-GTTATCGCTAAGGCTTC-TCGCTC-C--GTCT---GACTGTATCTCGACTCA-A----CT-G--------G-GGTAAGGGC----------TCT-----------------GCTTG----C-ATAG-C--ATAGTA-A----GCATGCC-A-----CTCTG-----TCATCGT---C------TT--GAAGCATAAT--GGCTCCCAAA-CCGACTGG--ACTTGCGTCTACTCTAA-T--TGTG---ACTGATTTCTGTGGA-TC-ATGA-T------ATGCTATGA-CATCATCAC---TGCACAG-GCT-GTCCTTCA---ACTTA--AGGAA---------------TGCT-TT------TTCACAC--CTAGAGTCCC-AATG-CCAGG-ATTTGTCTTTGTGAG-T--GAGTTCTCTG-AGAGG-T-TGATAAATGTCAGTATAGTTCTTTATGAAAC--GTGAACTGTA-GTGCGTACTTCCTCAGAATCTCCTAAAGTCTTTA---ACGTTCTGCGGCCTACTGAATTC-CTGG-ATT---G----CG---TTGACCTTTTCGGGGTCG----GGTG--ATAT-GC-CACTGTC-TGAAAACACA-ACACCGAAAAATGAAATCCT-GTTTGTTCTGAATTCACATTTATTACGGTTTACAGT-CAGGCCATGCTCCC--TCAGCCTTTCGAG-----TAC----TCTA---TG-T--AGTGCCTGGTCATG---CTGCTTAAGGTCTGTT-CCGAAAA-TCACAATATCATCGGATATGTTT-GTGGTACC-TGTATATT--CCTG----AATTAGCTGTCGAATAGTTTCGTGGA-AT-ATTTCTGAT-GCTGACG-TATACCGAAG--TTGAGACGCTTGTAACA---TAAAT-GCCAAGTGTGTAT-GAATGTAGTTATAAATCT-----G--GAGTTCTGGT-GAG-TCAAGTTGGTGAT--TTCCCTGCGGTAGATCCAGCTTGCTGAACACCTTGCT-CCGTTCAGGTC-CAATATAAGTTCCTCTATAGTAGG--TAGAGTG-TGTT---CG-------GCTGCTTATTGGCCTCC-CTCATATCAACACATAAGCGAATCTTCCTCCG-TT--CTTCTTAGTGGGTCACTA-------TGGGCGATACC-CATGGATTGGCTCACCATCGCC--T----CTCAATGATA--TCCTgcaatctaatgcttagagtgaccctatttcacgtaataactatacacatagacattacccgcggttgtacaatattttaccagtaataaataattttgaaaatatcatagaatcgtattgttgggaaattaattaacccttattagcaaagactcctaattgttgttcatgttggcaccacatagttacgcatttgagcaagtttctagacatcatatatttactgaataggagcattattccaaatgttatcattttatgcaacctgcaagtcgtctccactatctttttgtcaattgatattcactgactgcgaccactgcaagtattgaaatcatactatgatgactctccaatacctgagacgtttccagaatacataaatgactcacaaacacaatgcaacacacattcaagctttgcagaatctaacagtctgacactttcccctcgtttgtcaaatcttccgtttaattttgagttgggtttcgtcaatacaagtgatacaggacacggttcatgaatatatctacttgaccacgaaacttgtctacatgtgaatctgatccttacaggacatgaaaagatccctgcaagtgcctactatgtttcccacagcgaataacacattattttaaaccatatttgtcaatttcacctttgcgtttttgtttcccattccgttgcctgaatgattctgttgtcctggagggggttgtttcttgtatccatgtgttttgcttgaacttcgtcatcgtgctaccagtagtctagacacaaagtttcgtaactgttctattttaaagtcactccctctctctgagctaacttagcgccgtgattctgtgagacctacatcttttcaataatttgatcccgatttgaattcactcttggtttgccgcaagtcacagtcacttgcttgcctgtctcagtcttatcaaaaaactgtgtctactgtttctttgtcggtttgtgtaattttcggaacagctaacgctctaatttgaacattcattgttattctcaatcaaatattttgtcatgcgttttcacagtcactgt
gi|6 : tgatatgtagTGTGC---TA--CACGTTGTACCGATTC---ATCAATATGGA-----TT-TTCACCTG----ACGTTC------------CTTT----CA-TTTTCCTATCCTCGGA---------ACAGTCTGGAAACTCGTTTCAAC-AGTGTCtctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttctgtgctacacgttgtaccgattcatcaatatggattttcacctgacgttcctttcattttcctatcctcggaacagtctggaaactcgtttcaacagtgtc
gi|7 : tgatatgtagtctgccatgttctccttccctggtgcatactttatggtaaacttatagggttggagacaaagtccccatctttcaatgcgaagtgatggacgcgtcttctgccagatagtttccagcggcttgtgatctgtaatgatagtggaagtggtgcaagctgcttaaatacagatcaaagtgctcacaagcccatgttatcgctaaggcttctcgctccgtctgactgtatctcgactcaactggggtaagggctctgcttgcatagcatagtaagcatgccactctgtcatcgtcttgaagcataatggctcccaaaccgactggacttgcgtctactctaattgtgactgatttctgtggatcatgatatgctatgacatcatcactgcacaggctgtccttcaacttaaggaatgctttttcacacctagagtcccaatgccaggatttgtctttgtgagtgagttctctgagaggttgataaatgtcagtatagttctttatgaaacgtgaactgtagtgcgtacttcctcagaatctcctaaagtctttaacgttctgcggcctactgaattcctggattgcgttgaccttttcggggtcgggtgatatgccactgtctgaaaacacaacaccgaaaaatgaaatcctgtttgttctgaattcacatttattacggtttacagtcaggccatgctccctcagcctttcgagtactctatgtagtgcctggtcatgctgcttaaggtctgttccgaaaatcacaatatcatcggatatgtttgtggtacctgtatattcctgaattagctgtcgaatagtttcgtggaatatttctgatgctgacgtataccgaagttgagacgcttgtaacataaatgccaagtgtgtatgaatgtagttataaatctggagttctggtgagtcaagttggtgatttccctgcggtagatccagcttgctgaacaccttgctccgttcaggtccaatataagttcctctatagtaggtagagtgtgttcggctgcttattggcctccctcatatcaacacataagcgaatcttcctccgttcttcttagtgggtcactatgggcgatacccatggattggctcaccatcgcctctcaatgatatccttctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttcGTTTCATTGGCTCAGGTTTACTAGGTT-GAC-CT---ACTA-T-TGACAACCAAAACATACTTTT--------GCAAAAC--TTCTCATACTTCTT-ATCCATCCCTGGCCACCAAACTTTGCTTCTTAATAGCGACTTCATGGCAACAATGCCTGGATGTCCTTCATGTGCAAG--A----TCAAGAACCCTATCA-CGCA-----TTTGTGGTG---GGAAT-AC-ATTCGCGTACCTT------GTAATACTAATTTCCCAATAGAAC--ACAATTCACCC--CT-TATTGGCAA-TACTGTTTGTAC-TCAAT----ACGAT-G---CCA-CTGTTG--ATTGA-CAGACATTGCTA-ACA-GCACAAAGCTCGGGGTCATTCT--CT-GATGTCTC--TCT---TATCTCACG--AGTTGTC----AT-AGCAAT-GGG-GAAGGTTGC------TTCTTCAGCTA-C-AA--CCT--AACA-TA-ATCATCTACCAG----ATCAGAAGACT--TCTG----CA-----------------CT-------AAA-T------CAT-TCCT-AACAAGACGTGAAA-GCGTGTCCGCT--ATAT-TCT-TCGGACC---TGAAATGTACCGAACC---------T--TAAAAGTGT-G-GGTTGCATG-CGCAACA----CCC-ATCGTTCTATTCTA-GCG-C-AGACCTTTGACTT---------TGTAGAATATATACA----T-T-----CTA-----GC----GGTTTGTGGTCAGTGA-GAAG-----------C-TCAAACT-CTACACCGTATATATAAACATG--AAATCTTTCACATGCCCAT-ACGAGGGCTAGCGCCTC-TTTCTC---AGTCTGA-GA----GT--------A-C----CG-A--------C-G-------T----------TCTGTATCACTCAAGCTACGGCTTG----C-ATAAGA-GATAACC-C----GAAATTC-A-----CC--G-----TCTTGTT---C------TT--GCACCAGCAC--GGCGCCTAAT-CCAACAG
gi|8 : tttcgaccaaacagtaactgagacggacaaacaccagtcgtggtgtgtggggtatttcgatacataatcagaaatttgtcaagttcagatttccaatctcgaccttcggcatgagcaattcaaacacgtttcaaaattgacctattttatcgttccacctcgccgttcgcctgcggccataaaaggagtccattctggtgatgaagactattgccgttttctaacataaattctttaaaatttgactcgcaaattgaggaccattatcagtatgaattgaaaacagtagaccatgagtaaaaagaactttgacattaacgccatgatattctcagacgttgtttttgtaaactgccattcaaaatatctactgtaataattaactagtacaaaaatatactctttactcgcaatggacctaaaacgatcagggcaagatgtgccatggcgcagaaggtaattctgtgcACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTT---GTCAATATGTA-----GC-TTCAACTT----AAA------------AGTCTTT----CA-ATTTCCAAT--------------------TCAGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|9 : TTCA---TGATCCTTT---GAGGATTC--CTCGCGAAT-----G--TGTTGA-----A--GGCCTT-TGG-G----TTACATTGCGTTACCTC-CTC-CTAA--CAT--A-CA-GA-ATA--C---CGGCATTATT------CTCTTCTGACATCG---TTTCTGGACTTTCCCCTAGCATTAGAACA---G-TTTCGGCT---CAAGGCGAGACAAGCGCATCAGCGT-GCGTCTCT-AGGTCCT-AGT--AATGTAC---ACTAAACT----T--CAAACATGTCATGGCTG-AAGGCCTAAGCTGT-CC--AGCGTTCGATTCTA-ACG----GGCG-GTTA-TTG--ATTG--TGGATAG-----ATAGTAAT-TATATACCATGTAAGT----GGTATGTGATCTGTC-CAGAT-----------TCTCACACT-TAAG-CCATA-ACGTACATGTGGCAATTCTCTCGCAT--CTAA-ATTACCCACAGTGCTTC-TCTCTC-C--GTCTTGAGA----AT--------ACAGTTTCTCA--------C-A-------T----------TCA-----------------G-TAA----G-ATAG-C-GACAGCT-TAAATGAATTCCGA-----TC--ATGCATCTGTGTT---C------CTTGGGACCAGTACTTAGCACCCAGAACTTACGGGCAACGCGCGTCGACTATGA-C--TC-T---GGT---TCCTT---A-TTATTGG-TTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT-TTCA---GC-TCGTTCGAATGCTC----CTCCCTTGCTGTTTG---GTCCATTCATCCAAG----C---T--C-A-C-GTTCTTCTTGG-CAA---------CTCGAAAGCGGACGCAGCTATTGTCGAAA-AATaacaatgctggtccttttccgttcaacacatagaatttccgcttcattccagtatagaaatctgtgttggaatttaccctagcaagcctaatgtgtcagtggcaccatacgcatacagtttcttgacatatttttgtgaatggctttcaaatgtttctttttcaactcgtccactattttttgtcaattatattcactgacgcacccatgtcaatgatgaaatcaacatgatgacctccaatactgacccgagtttccagatacatcaacactaacgcacacacatcatcagattcagaatctaacatctggactttccctcgtttgtcaaatttccgtttatttgatttgggtttcgtcatacaagtgatacaacacttcatgaaatatcctatctgaccacactttctacagttctgatcccttacaggacatgaaagatcccttgcaaagtgcccttgtttcccacagcgataacactttttaacatatttctcattctcacctttgcgtttttgtttcccattgttgccatgaattctgtttcctgacggtgctgtttctgtatccatgtgttttgcttgaacttctgtcatctctacagtagtctagacactatagttcgtaactgttctaattttaagtcctcccctctctcgagtaacttagcccgaattctgtgagacctacacttttcaataatttgatcccgaatttgttcatcttggtttgcgaagtcacagtacactgcttgctgtctcagtcttatcaaaaactgttctactgtttctttgtcggtttgtgtaattttccggaacactaacgctcatatggaacattcattttattctcaaaatatttgttcagcgttttcacagtcactgtatacacggtgtcatcctgtacactctgaacttcatttaacgtgtaataaatgtctt
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ATTAATTCTGTTCACTGACGGCGCTTTTTCTGTATCCATGTGCTTTGCATGAACGTCTGTCATTTGTACAGTAGGCGCTATGGTTCGTAACTGTTCTTATGATAAGTCCCTAACTTTCTCGAGTAACTTAGCCCTAACTTAATGAGACCAACAATTTTTCCCCCAATTTTTGCAAAGTCACAGTAAAACTGCTTGCTGTCTCATTCTTGTCTAAAATTGTTCTAAAGTTTCTCTCTCATTTTGAGTAATTTTCAAAATACATATATAATTGCTCATACGGAACATTCACTTTATTCGCAAAATATTTATTCAGTGTTTTCACAATCACTGTGTACACGGTGTTAACCCGTACGCTCTGAACTTCATTTAACGTATTGTAAACGTCT
Unaligned ( gi|13 ): TTTCGATTTGAAGAGTAATTCGGGCTGGACTTTTACCGGTCGTGGCTGGGAGTCGATCGATACGCAAGTAAAAATCTTGGGTTCCACCAGCGTGTATTCTTTTTTCCAGTCTCCCCTCAGCGTTTGGCTGTGCACTTTGAAGTAGAGCTTCAGATAATCGGAGATACAGATTTGGATGCTTTTGATGTCCCACATGGGGCCCTGGCTAGAGGGTGTTGTTTGTATTGTCTACTCCCGTTTATTCTAAGGTATTTTTGGAATTCTTCGGATACGAAACTTGCGGACCGTTATCA
Unaligned ( gi|14 ): AACATCTGAACATTCCCTCGCTTGTCAAATGTCCGTTTAGCTGATTTGGGCTTCGATATGCAACATTAACACTTCATGAAATGTCCTATCTGGTCATAGCTTTCTACAATTCTGATCCATGACTAGACATGAAAGATCCAAAGTGTCCTTATTTCCCACATCGACAACATTTTTACATTCTCACCTTTGCGTTTAGATTCCCCATTGTTTCCATGAC
Unaligned ( gi|16 ): TGTTTGATCCCATTTGTACGAGTAAATCTCTTGAATTCCTCTGAAGTGAACTGAGGTCCGTTGTCGCTGACCATAACACTAGGAACTCCATTCCTTGCAAATATGTTTCTAAGGACTTCAATAGTTTTG
Unaligned ( gi|18 ): ATTCTCACCTTTGCGTTTTTGTTTCCCATTGTTGCCATGAATTCTGTTTACTGACGGTGCTGTTTCTGTATCCATGTGTTTTGCTTGAACTTCTGTCATCTC
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111111 111 111 22222222 3333333 11111 222222222 111111 11 11 22222 11 1111 2222 2222 222222222222222 33333333 111111 111111 3333333333333333333333333333333333333333333333333 0000000000000000000000000000000000000000000000000 111 1 111 555555555 22222222222222222 11 44444444444444444444444444444444444444444444444444444 22222222222 111 2222222222222 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1111 2222 1111111 222222222222222 1111111111 111 111111 111 11111111111111 11 11111111111 22222 1 111 1 444444444444444444 222222 444444444444444444444 666666666666666 111 111 222222 22222222 111 2222 1111 11 111 11 11111 11111111 44444444444444444444444444444 1111 1111 33333333 55555555555555555555555 33333 33333333 111 11 222 1 11 1 1111 11 1 1 11 1 11 22222 11 1111 1 1 1 1 11 1 11 1 1111111 111 22222222 777777777777777777777 2222 1 9999999999999999999 11 1 7777777777777 222 2222 222 11
lowQualScore : 1 1 666666666 6 111 666 1 44444444 1 9999 6 1 3 22 1 2 22 88 4 0 1 0 5555555 1 99999 22222 666666666 4 5 0 11 1 0 666666 5 0 1 55 1 0 11 99 8 3 00000 8 11 7777 0 88 0 777 8 8 8 0 5 8 2222 0 1111 1 1 111111111111111 99 11111111 6 666666 999999 2222222222222222222222222222222222222222222222222 1111111111111111111111111111111111111111111111111 88 6 6 1 555 4 5 7 0 999999 1 0 000 222222222 77 11 5 1 1 77777777777777777 00 1 2 77 66666666666666666666666666666666666666666666666666666 00000000000 777 8888888888888 5 1 55 6 3 1 888 1 88 66 11 1 5 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 2222 5 3333 4444444 5 777777777777777 1 1 5555555555 66 1 1 11 111 1 0 5 1 1 77 0 2 1 8888 777777 0 000 55555555555555 1 77 66 1 8 66666666666 55555 1 000 2 111111111111111111 0 444444 888888 333333333333333333333 1 1 333333333333333 1 666 1 1 11 0 1 5 2 99 1 6 3 0 1 111 999 222 1 0 1 333333 44444444 222 5555 1111 11 9 000 99 8 6 44 99999 9999 1 7 1 1 6 1 3 77777777 1 00000000000000000000000000000 22 999 1 99 7 9999 6 3 77 6 7777 99 1 4444 8 0 99 0 8 1 3 44444444 99999999999999999999999 8 1 33333 1 11111111 1 777 33 0 444 0 1 8 1 11 0 1 6 22 5 1 4 2 33 0 2 3 9 3333 11 1 33 0 0 0 1 0 1 1 33 4 0 11 55555 33 3 6 6 99 7 4444 7 99 3 3 3 3 88 3 88 3 9999999 0 777 3 55555555 1 444444444444444444444 1111 0 0 2222222222222222222 2 33 0 0 0 3333333333333 333 7 8888 333 88
lowQualScore : . . ......... . ... ... . ........ . .... . . . .. . . .. .. . . . . ....... . ..... ..... ......... . . . .. . . ...... . . . .. . . .. .. . . ..... . .. .... . .. . ... . . . . . . .... . .... . . ............... .. ........ . ...... ...... ................................................. ................................................. .. . . . ... . . . . ...... . . ... ......... .. .. . . . ................. .. . . .. ..................................................... ........... ... ............. . . .. . . . ... . .. .. .. . . ....................................................................................... . .... . .... ....... . ............... . . .......... .. . . .. ... . . . . . .. . . . .... ...... . ... .............. . .. .. . . ........... ..... . ... . .................. . ...... ...... ..................... . . ............... . ... . . .. . . . . .. . . . . . ... ... ... . . . ...... ........ ... .... .... .. . ... .. . . .. ..... .... . . . . . . . ........ . ............................. .. ... . .. . .... . . .. . .... .. . .... . . .. . . . . ........ ....................... . . ..... . ........ . ... .. . ... . . . . .. . . . .. . . . . .. . . . . .... .. . .. . . . . . . . .. . . .. ..... .. . . . .. . .... . .. . . . . .. . .. . ....... . ... . ........ . ..................... .... . . ................... . .. . . . ............. ... . .... ... ..
lowQualScore : 0 0 888888888 7 777 000 0 22222222 0 3333 7 0 3 55 0 2 55 33 0 7 0 6 7777777 4 33333 44444 666666666 3 4 4 44 0 6 444444 0 6 7 77 3 8 00 00 0 2 00000 0 00 0000 8 88 8 000 0 0 0 8 0 0 4444 7 4444 0 0 888888888888888 22 22222222 7 222222 222222 5555555555555555555555555555555555555555555555555 0000000000000000000000000000000000000000000000000 33 7 7 0 333 0 7 1 7 777777 4 7 000 777777777 99 77 7 4 4 99999999999999999 00 3 7 33 66666666666666666666666666666666666666666666666666666 11111111111 333 1111111111111 7 0 99 6 0 0 000 4 33 77 11 0 7 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 1111 7 7777 7777777 7 000000000000000 1 0 1111111111 99 0 0 44 111 0 2 0 0 1 99 4 7 4 9999 444444 7 000 66666666666666 9 99 77 0 9 66666666666 66666 4 000 4 333333333333333333 7 999999 333333 666666666666666666666 0 7 333333333333333 7 000 4 7 44 4 0 7 2 22 0 7 7 3 0 777 888 000 4 8 0 444444 22222222 444 6666 8888 00 6 888 00 8 0 22 99999 0000 0 2 0 0 7 5 5 77777777 0 88888888888888888888888888888 55 222 0 22 3 0000 7 7 33 7 8888 22 0 2222 0 8 44 8 0 4 2 88888888 66666666666666666666666 0 4 22222 4 66666666 0 000 22 6 888 6 0 0 0 55 8 0 5 88 0 2 2 5 22 0 5 2 2 2222 00 0 88 2 0 0 0 2 0 0 88 2 0 22 00000 88 2 7 7 22 3 2222 3 22 3 3 3 3 33 3 33 3 8888888 8 555 2 22222222 0 000000000000000000000 2222 0 2 5555555555555555555 5 88 0 7 7 3333333333333 333 3 3333 333 33
consensus : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAAN----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAAC--C--AGACGTTTGTAAC---ATAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCTT----AAGTTC---------AGTCTTT----CA-ATTTCCCATCC-CGGA---------ACAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
Reference ( family-2956 ) : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAAN----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAAC--C--AGACGTTTGTAACG--ATAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCTT----AAGTTC---------AGTCTTT----CA-ATTTCCCATCC-CGGA---------ACAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|1 : TCGGTTTTACTGGTTTTGGCTT----GCAG-GTGTCTGTCAGTAG-ATGACACTGACTACACGCTTTG--------ACAAA-T--ATCTC-TGCCTCCGTGTCCATTCCTGGCCACCATACCTTTTCTCTCAGTCGCTGTTTCGTACGTACAATTCCCTAGTGACCTTCGTGTGCCAG--AGAAATTGTA-----TTTTTTC-TAAGAAGTTT----TG---GCA-TCATAATACGAGTTCCACATACATGTAGCAC--AATGCCATCAACGACTGACAATTC--TGAATG-TAT-CCTGCGCAAC-----TCCGT--GTTTTGAAAATTG-TT--GTCTGT----CTTGATCCCAT-TTATGATGTCTG--TTA-TTTCA---TGATCCTTT---GAGGATTC-----------CTCGCGAATGTCGTG----AA-GGCTTT-GGGTA----CAGC------GTTCCTTGCAA-TAAA----------A-TA------CG--CAT----ATT------CA--TCTG----CGACGTTTCTGGAC--TTTCC-------CGT-TGAAAG--TT-G----GCCAAGGCGAGACA-GCGCATCAGCG--GCGT-TCTTAGGTCCT-AG---AATGTAC---ACTAAC------T--TAAACATGT-ATGGCTG-AAGCCT---AA-GTGTCC-AGCGTTCGATTCTA-ACG----GGC----GGTTTTGATTTT--GGTGAAA-----ATA----T-A-----CCA-----GTAAGTGGTTTGTGATCTGTC-CAGAT-----------C-TCACACT-TAAGCCCATAAACGTACATGTG--GAATCTCTCGCATCTAAAT-ACTACCCCCAGTGCTTC-TCTCTC-C--GTCT---GA----G---------A-A-----T-A--------CAG-------T----------TT-------------------CTCGACATCAGTAA---GATAGCGAC----AGGCTTA-AATGATCC--A-----TCATTCTGTTT------TT--GGACCAGTAT--AGCACCCAGA-CCTACGGG--ACTCGCGTCGACTATGA-C--TC-T---GGT---TCCT---GA-TT-TTGGGTTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT--TCA---GC-TCG-TCGAATGCGTCCTC-TTGCTGTTTG---GTCCATCT--CCA-----------G-C-TCACGTTCTTCTTGGTCAA-C--------TCG--AGCGG-CGCAGCTATTGTCGAAA-AATTTGATATGAACC--GGGCACAGTA-GTTTGCAAGTCCAAGGAAACTCCGCA---CTTCCGAGCTGTTTGATGGTTTAC--GCGTCTC--G-GTT---A----CTACCTTGATTTTCTC-T--TCGTCC-GGCC--GTATTCC-C--TCTGCTGAGATTATGTGTCCGAGAAA-AACAATTTCTGATAGACC-GAACTTGCACTTTTCACGGTTAAGCGTAAAACCCTTT-TGCA--TCAATCTAT---C-----TA-----GTAACTTTGAT--AGTTTTTCATCATGAT-TGGCCT--GGTCGGCG-CCATACA-CAACAATGTCGTCAGAGAGATTTCGTACTCCCTT-CA-GAC--CCTG----AATCACTTGACCAATGACT-CTTTGGTAT-ATTTC-GGACGCAGACGAAATTCCGAACATC--AGCCGTTTATAGCGATATAAACCGTCATGTGT-TGT-GAATGTTGT----AATTTCCCT---TGACTCCTCGTCAAGTTCAATTTGGTGATACCCCA--TCGA-AGGTCTAGTTTCGAAAAGACTTTACTTCCATTCATGTC-CTCTAGTATCTCGTCAACAGTTGGTATCGGATGACGCTTC-CGTCTTACTGCTAT--CTTTG-CGCGACGCATGTCGACACAGATTCGAATTT--CGTCATTTTTCTTC-----GAG--ACTACG-------------ACC-CATGC--TGACGGCTCATCAACTTT----TTCGATGATG--TCTT
gi|10 : ttttccgattgaagagtaattcggctggacttttaccggtcgtggcatgcggagtcgatcgatacgcaagtaaaaatttgggtaattcttttttccagtctcccctcagcgtttgcggctttgatggccttcagtagcgtgcgattttgacttccccgttcccctggggccaatagggtgttgtttgtatgtgtctaactcccgtttattctaaggtattctttgaattcttcggatacgaactgcggaccgttatcacaacgaatgctttgaggaataccgtgtctcacaaacattgcttccatctgtagaattatcctttcactggttatttttttaggatagctacttcttgatatcttgagaagtaatcgacgactaccagaaggttctctcccgagggaaatggtcccgtctcatcaaatcaatagccaaatcttgccacggtccatcgggcattggtgGCTCT---C------TT--GCGTCAGTAT--AGCCCCTAAG-CCAACAGG--GCTGGCGTCAACCACAACT--TC-GATAGGT---TTGTTCGG--------G-TTGTAATATGAAATTA-CGATAT--CGCTGGA-CAA-G---GTT-TTGA---GTTTT--TCAAAC----CCACTTTCCTGCTCAGATGCCCATTG--CCAAT----C-GGTATC-CGA-A--CGTGTTAGACGG-C--G------A---AGCGG-TTCGCTCACAGTGGAAT-AGTCAGGTATTAACCTGGAGCAGTATGCGGTC---ATTCCCAGGAAGCTCCTGA---TTTCAtatcctctagctcgtctagcttcttgcgcattgctttcctgacgttgaacggtaaacgccttagaggttgagctactggcataacagcgtcatcaaggtgaattttcaggcgaaagtttttcagtttgcct
gi|11 : caattctaagcggaggtttggggcgtttccaaatgccaagtaaaggtttatgatcggtgaccacacggaagtgaggcgcacctctcaggtacatatcaaaatgttcgcaagcccagataatagctaacgcccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngatgtagcgcgattctggtccgctgagtgataggcttgcacaagcaacaactttTAATGTTGTTGGTTTGATAGGTTCTGGTTT--TGGAAATGCG-CT---GGTAATCTGACATCCATGACATAATTTC--------ACATA-T--TTCTC-CACGTCTTTGTCCATACCTGGCCACCAAACTTTATTTCTCAACTGCTGCGTAGTACCCACTAATCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATCCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTA--CGTAAT-GGTAAATAAT-----TAC-T--AT----AGGATTGATCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-AATTGGACAA-GTTCC---TCATCCTTCCTAGAAGCTctcgcattggagggacgttgcacgtcttgaatagcggacattttctcggggtacggcgagataccagctttactgaacactattccaaagaaggtgattcggtcagagttgaattcacatttgaacggttcagcattagtccat
gi|15 : ataacgactgaaatagtccaccaacaacaacatattgcctgtagtgttaacggccaagcagatctatcgctaaatcttgccgcaatccagttggTATCTC-AGTCTTCCGGAATTCACACTTGTCACGGTTCAGTTT-CAGTCC-TG---------AATC-CT---GGATTCTGC----GGAACACTG-TCAAGCCTGTCATCATGCTCCTTACG--GGTTT--T-CCATGAATCAA-GATATCATCAATGATAACCTCTACTCCC-T---CGATTCCATGTAGTAATT--CTGTCA
gi|17 : --AGACGCTTGTAACA--ATAAAT-GCCAAGTGTGTACTGAATGTAGTTATAAATCT-----G--GAGTTTGGGTGAAGCTCAAGTTGGTGAT-ATCCCCTGCGT-AGATCCAtctt
gi|19 : ttgCTGGGTGACCTTCGTGAGCTAA--T----TCCAAAACG-TGTGTTCGCAA-----TT----CAGTCGGAATAACAATTCGGGTCCCTC------GGAGAATTAGTTTTCCAATGCAAC--ACAATT
gi|2 : TAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAA--TTTTTA-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTC-GCA-TTGGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTC-TTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAAA----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAAC--C-------TTTGTA-----------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTT---GTCAATATGTA-----GC-TTCAACTT----AAA------------AGTCTTT----CA-ATTTCCCA-------------------ATTCAGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|3 : TCGGTTTTATCGGTTCCCGTT----------GCA-CG---TGT----TGTCACCATTGACATGTATTCATGCCTTGACAAA-TAATTTTC-AACTTCTGTGT---------GCCA--ATACTTTTTCGCGCAGCCGTTGTTTG------ACTATTCCTTGATGTCCCTCATGTGCAAGAAA----TTGTAT---CCTTCCTCATAG--ATTTT---------GGCATAAGTATTCGGGTTCCGC------GTAATAC--AATACCATCAAAAACTGAAAATTC
gi|3 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgTTCG---CGATCCTTT---GATGATTCCCTCC---AAACT-TCG--T--CGATTGTGAG-GGCTTTTGGA-A----CCGC------ATTCCTTGCAATC--A--TCT--G-CAATATGTC---T--CAC-----TT------TG--TCTG----C-----TTC---------------------A-T-----------TCTGACTAAGAAGTGGCA-AAGCATCAGCGGCAT-T-TTT-AGGTCCT-GGCG---TGTAT---ACTAGGACTAGCT--TGAACGTA--ATGGCTGTAG---TCGAAGCGT-AC--AGCGCTCAATCCTT-AC--C-GG-----TGGCTTCGATTTCGGCGAGAAA-----ATA----TATG----TCA-----GC----GGTTTGTGGTCCGTC-CAGAT-----------T-TCGAATT-CAAGCCCATAAACGTATATGTG--AAATCTCTCACA-GCCAAAGACTACTCCTAGTGCCCC-TCGCTCCGT-TTGT---GA----AT--------A------TT-GTTTCTCGAC-G-------TCGGTTAGAGATCT-----------------GCTTG----C-GTA----GGCA--A-C----GGGTTTA-A-----AC--GAT---CCGTCCC---CCTGTTTTT--GTGACATTAT--AGCTCACAGT-CCTACGGG--ACTCGAATCAACTATAA-TATTA-T---CCT---TGTTTCGGACTT-TCGG-TTGTA--ATAC-ACCAGTGTTT-----------CAA-A-----TCTTCAAACGCATC------------CT--GGTGCCGTTTG---GTCCACTT--CCAAA----C---TG-C-A----TTCTTTCTAGTCAA-TTAA----CGC---AAAGG-TGCAGTAATCGTTGAGA-AATTCTGTATGAACC--GCCCACAATG-ATTCGCCAGTCCCAGGAAGCTTCGTA---CTTCAG---CACTATTTG-----TTGACTTG-C--GTGTTTCTGACACCGCT-TTGATCTTCTCG---TCGT-CCGGTCGACTATCACGTGTACG--GGA-AACACGATCCTCGTAAA---------------GTC--AAATTTACATTTTTCACGATTCAAAGT-AAGGCCTT--TCTTAACCAGTCTATCAAG-----TATTTTGGCAA-ACT---------TTTCATCATGAT-CTGCCT--GGTCTGTT-CCATAGA-CAACAATGTCATCGGAGAGATTCCGTACTCCT-T-CAAGAC--CTTG----GATCACTTGACAAATCACT-CGCTGATAGATCTATTAGA-GTTGGtgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacttcgcgatcctttgatgattccctccaaacttcgtcgattgtgagggcttttggaaccgcattccttgcaatcatctgcaatatgtctcactttgtctgcttcattctgactaagaagtggcaaagcatcagcggcatttttaggtcctggcgtgtatactaggactagcttgaacgtaatggctgtagtcgaagcgtacagcgctcaatccttaccggtggcttcgatttcggcgagaaaatatatgtcagcggtttgtggtccgtccagatttcgaattcaagcccataaacgtatatgtgaaatctctcacagccaaagactactcctagtgcccctcgctccgtttgtgaatattgtttctcgacgtcggttagagatctgcttgcgtaggcaacgggtttaaacgatccgtccccctgtttttgtgacattatagctcacagtcctacgggactcgaatcaactataatattatccttgtttcggactttcggttgtaatacaccagtgtttcaaatcttcaaacgcatcctggtgccgtttggtccacttccaaactgcattctttctagtcaattaacgcaaaggtgcagtaatcgttgagaaattctgtatgaaccgcccacaatgattcgccagtcccaggaagcttcgtacttcagcactatttgttgacttgcgtgtttctgacaccgctttgatcttctcgtcgtccggtcgactatcacgtgtacgggaaacacgatcctcgtaaagtcaaatttacatttttcacgattcaaagtaaggcctttcttaaccagtctatcaagtattttggcaaacttttcatcatgatctgcctggtctgttccatagacaacaatgtcatcggagagattccgtactccttcaagaccttggatcacttgacaaatcactcgctgatagatctattagagttgg
gi|4 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgtcggttttatcggttcccgttgcacgtgttgtcaccattgacatgtattcatgccttgacaaataattttcaacttctgtgtgccaatactttttcgcgcagccgttgtttgactattccttgatgtccctcatgtgcaagaaattgtatccttcctcatagattttggcataagtattcgggttccgcgtaatacaataccatcaaaaactgaaaattctgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacTAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAATTTTT--A-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTC-GCATT-GGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTCTTTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAAA----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAAC--C-------TTTGTA-----------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCT
gi|5 : ACGATGACTGGACTA-ACCTCATGG--TGTTTGATCATCGACTTTTCGGCTCGATAATGCTTCCTGAGATTTCCAGTTCCCTCAGTGCTAATAAAGGAAATTCGGTATGATTTGGCTTTGCGCTTGAAGGCAAGTTCTACTTGTTCTTTGTCAATA-ATAGATAGGCATTCACTTTAGTAAAGTTCTTTTTCTATATTTTTTTTGCCATATTTCTCATCT-CAAAACACCTTATACAGATAGAAAATTA--TTGAATCAATGCCGTCCAGCCCTACGATTCTGTTTACAAGTATTAATCTCTTCAAGCTTC--AACACCCTAAAGGTCGCCATTGCGGGGTTATTCTTTCGCCC
gi|6 : TCTGCC--ATGT-TCT-CCTTCCCTGGTGCA---TAC---TTTA--------TGGTAAACTTAT-AGGGTTG-GAGAC---AAA-GT-CCCCATCTTTCAATGCGAAGTG-A-TGGAC-GCGTCTTC--TGCC-----AGAT-----AGT----T-T-----CCA-----GC----GGCTTGTGATCTGTAA-TGATAGTGGAAGTGGT-GCAAGCTGCTTAA--ATACAGATCAAAGTG--------CTCACAAGCCCAT-GTTATCGCTAAGGCTTC-TCGCTC-C--GTCT---GACTGTATCTCGACTCA-A----CT-G--------G-GGTAAGGGC----------TCT-----------------GCTTG----C-ATAG-C--ATAGTA-A----GCATGCC-A-----CTCTG-----TCATCGT---C------TT--GAAGCATAAT--GGCTCCCAAA-CCGACTGG--ACTTGCGTCTACTCTAA-T--TGTG---ACTGATTTCTGTGGA-TC-ATGA-T------ATGCTATGA-CATCATCAC---TGCACAG-GCT-GTCCTTCA---ACTTA--AGGAA-----------TGCT-TT------TTCACAC--CTAGAGTCCC-AATG-CCAGG-ATTTGTCTTTGTGAG-T--GAGTTCTCTG-AGAGG-T-TGATAAATGTCAGTATAGTTCTTTATGAAAC--GTGAACTGTA-GTGCGTACTTCCTCAGAATCTCCTAAAGTCTTTA---ACGTTCTGCGGCCTACTGAATTC-CTGG-ATT---G----CG---TTGACCTTTTCGGGGTCG----GGTG--ATAT-GC-CACTGTC-TGAAAACACA-ACACCGAAAAATGAAATCCT-GTTTGTTCTGAATTCACATTTATTACGGTTTACAGT-CAGGCCATGCTCCC--TCAGCCTTTCGAG-----TAC----TCTA---TG-T--AGTGCCTGGTCATG---CTGCTTAAGGTCTGTT-CCGAAAA-TCACAATATCATCGGATATGTTT-GTGGTACC-TGTATATT--CCTG----AATTAGCTGTCGAATAGTTTCGTGGA-AT-ATTTCTGAT-GCTGACG-TATACCGAAG--TTGAGACGCTTGTAAC---ATAAAT-GCCAAGTGTGTAT-GAATGTAGTTATAAATCT-----G--GAGTTCTGGT-GAG-TCAAGTTGGTGAT--TTCCCTGCGGTAGATCCAGCTTGCTGAACACCTTGCT-CCGTTCAGGTC-CAATATAAGTTCCTCTATAGTAGG--TAGAGTG-TGTT---CG-------GCTGCTTATTGGCCTCC-CTCATATCAACACATAAGCGAATCTTCCTCCG-TT--CTTCTTAGTGGGTCACTA-------TGGGCGATACC-CATGGATTGGCTCACCATCGCC--T----CTCAATGATA--TCCTgcaatctaatgcttagagtgaccctatttcacgtaataactatacacatagacattacccgcggttgtacaatattttaccagtaataaataattttgaaaatatcatagaatcgtattgttgggaaattaattaacccttattagcaaagactcctaattgttgttcatgttggcaccacatagttacgcatttgagcaagtttctagacatcatatatttactgaataggagcattattccaaatgttatcattttatgcaacctgcaagtcgtctccactatctttttgtcaattgatattcactgactgcgaccactgcaagtattgaaatcatactatgatgactctccaatacctgagacgtttccagaatacataaatgactcacaaacacaatgcaacacacattcaagctttgcagaatctaacagtctgacactttcccctcgtttgtcaaatcttccgtttaattttgagttgggtttcgtcaatacaagtgatacaggacacggttcatgaatatatctacttgaccacgaaacttgtctacatgtgaatctgatccttacaggacatgaaaagatccctgcaagtgcctactatgtttcccacagcgaataacacattattttaaaccatatttgtcaatttcacctttgcgtttttgtttcccattccgttgcctgaatgattctgttgtcctggagggggttgtttcttgtatccatgtgttttgcttgaacttcgtcatcgtgctaccagtagtctagacacaaagtttcgtaactgttctattttaaagtcactccctctctctgagctaacttagcgccgtgattctgtgagacctacatcttttcaataatttgatcccgatttgaattcactcttggtttgccgcaagtcacagtcacttgcttgcctgtctcagtcttatcaaaaaactgtgtctactgtttctttgtcggtttgtgtaattttcggaacagctaacgctctaatttgaacattcattgttattctcaatcaaatattttgtcatgcgttttcacagtcactgt
gi|6 : tgatatgtagTGTGC---TA--CACGTTGTACCGATTC---ATCAATATGGA-----TT-TTCACCTG----ACGTTC------------CTTT----CA-TTTTCCTATCCTCGGA---------ACAGTCTGGAAACTCGTTTCAAC-AGTGTCtctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttctgtgctacacgttgtaccgattcatcaatatggattttcacctgacgttcctttcattttcctatcctcggaacagtctggaaactcgtttcaacagtgtc
gi|7 : tgatatgtagtctgccatgttctccttccctggtgcatactttatggtaaacttatagggttggagacaaagtccccatctttcaatgcgaagtgatggacgcgtcttctgccagatagtttccagcggcttgtgatctgtaatgatagtggaagtggtgcaagctgcttaaatacagatcaaagtgctcacaagcccatgttatcgctaaggcttctcgctccgtctgactgtatctcgactcaactggggtaagggctctgcttgcatagcatagtaagcatgccactctgtcatcgtcttgaagcataatggctcccaaaccgactggacttgcgtctactctaattgtgactgatttctgtggatcatgatatgctatgacatcatcactgcacaggctgtccttcaacttaaggaatgctttttcacacctagagtcccaatgccaggatttgtctttgtgagtgagttctctgagaggttgataaatgtcagtatagttctttatgaaacgtgaactgtagtgcgtacttcctcagaatctcctaaagtctttaacgttctgcggcctactgaattcctggattgcgttgaccttttcggggtcgggtgatatgccactgtctgaaaacacaacaccgaaaaatgaaatcctgtttgttctgaattcacatttattacggtttacagtcaggccatgctccctcagcctttcgagtactctatgtagtgcctggtcatgctgcttaaggtctgttccgaaaatcacaatatcatcggatatgtttgtggtacctgtatattcctgaattagctgtcgaatagtttcgtggaatatttctgatgctgacgtataccgaagttgagacgcttgtaacataaatgccaagtgtgtatgaatgtagttataaatctggagttctggtgagtcaagttggtgatttccctgcggtagatccagcttgctgaacaccttgctccgttcaggtccaatataagttcctctatagtaggtagagtgtgttcggctgcttattggcctccctcatatcaacacataagcgaatcttcctccgttcttcttagtgggtcactatgggcgatacccatggattggctcaccatcgcctctcaatgatatccttctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttcGTTTCATTGGCTCAGGTTTACTAGGTT-GAC-CT---ACTA-T-TGACAACCAAAACATACTTTT--------GCAAAAC--TTCTCATACTTCTT-ATCCATCCCTGGCCACCAAACTTTGCTTCTTAATAGCGACTTCATGGCAACAATGCCTGGATGTCCTTCATGTGCAAG--A----TCAAGAACCCTATCA-CGCA-----TTTGTGGTG---GGAAT-AC-ATTCGCGTACCTT------GTAATACTAATTTCCCAATAGAAC--ACAATTCACCC--CT-TATTGGCAA-TACTGTTTGTAC-TCAAT----ACGAT-G---CCA-CTGTTG--ATTGA-CAGACATTGCTA-ACA-GCACAAAGCTCGGGGTCATTCT--CT-GATGTCTC--TCT---TATCTCACG--AGTTGTC----AT-AGCAAT-GGG-GAAGGTTGC------TTCTTCAGCTA-C-AA--CCT--AACA-TA-ATCATCTACCAG----ATCAGAAGACT--TCTG----CA-----------------CT-------AAA-T------CAT-TCCT-AACAAGACGTGAAA-GCGTGTCCGCT--ATAT-TCT-TCGGACC---TGAAATGTACCGAACC---------T--TAAAAGTGT-G-GGTTGCATG-CGCAACA----CCC-ATCGTTCTATTCTA-GCG-C-AGACCTTTGACTT---------TGTAGAATATATACA----T-T-----CTA-----GC----GGTTTGTGGTCAGTGA-GAAG-----------C-TCAAACT-CTACACCGTATATATAAACATG--AAATCTTTCACATGCCCAT-ACGAGGGCTAGCGCCTC-TTTCTC---AGTCTGA-GA----GT--------A-C----CG-A--------C-G-------T----------TCTGTATCACTCAAGCTACGGCTTG----C-ATAAGA-GATAACC-C----GAAATTC-A-----CC--G-----TCTTGTT---C------TT--GCACCAGCAC--GGCGCCTAAT-CCAACAG
gi|8 : tttcgaccaaacagtaactgagacggacaaacaccagtcgtggtgtgtggggtatttcgatacataatcagaaatttgtcaagttcagatttccaatctcgaccttcggcatgagcaattcaaacacgtttcaaaattgacctattttatcgttccacctcgccgttcgcctgcggccataaaaggagtccattctggtgatgaagactattgccgttttctaacataaattctttaaaatttgactcgcaaattgaggaccattatcagtatgaattgaaaacagtagaccatgagtaaaaagaactttgacattaacgccatgatattctcagacgttgtttttgtaaactgccattcaaaatatctactgtaataattaactagtacaaaaatatactctttactcgcaatggacctaaaacgatcagggcaagatgtgccatggcgcagaaggtaattctgtgcACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTT---GTCAATATGTA-----GC-TTCAACTT----AAA------------AGTCTTT----CA-ATTTCCAAT--------------------TCAGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|9 : TTCA---TGATCCTTT---GAGGATTC--CTCGCGAAT-----G--TGTTGA-----A--GGCCTT-TGG-G----TTACATTGCGTTACCTC-CTC-CTAA--CAT--A-CA-GA-ATA--C---CGGCATTATT------CTCTTCTGACATCG---TTTCTGGACTTTCCCCTAGCATTAGAACA---G-TTTCGGCT---CAAGGCGAGACAAGCGCATCAGCGT-GCGTCTCT-AGGTCCT-AGT--AATGTAC---ACTAAACT----T--CAAACATGTCATGGCTG-AAGGCCTAAGCTGT-CC--AGCGTTCGATTCTA-ACG----GGCG-GTTA-TTG--ATTG--TGGATAG-----ATAGTAAT-TATATACCATGTAAGT----GGTATGTGATCTGTC-CAGAT-----------TCTCACACT-TAAG-CCATA-ACGTACATGTGGCAATTCTCTCGCAT--CTAA-ATTACCCACAGTGCTTC-TCTCTC-C--GTCTTGAGA----AT--------ACAGTTTCTCA--------C-A-------T----------TCA-----------------G-TAA----G-ATAG-C-GACAGCT-TAAATGAATTCCGA-----TC--ATGCATCTGTGTT---C------CTTGGGACCAGTACTTAGCACCCAGAACTTACGGGCAACGCGCGTCGACTATGA-C--TC-T---GGT---TCCTT---A-TTATTGG-TTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT-TTCA---GC-TCGTTCGAATGCTCCTCCCTTGCTGTTTG---GTCCATTCATCCAAG----C---T--C-A-C-GTTCTTCTTGG-CAA---------CTCGAAAGCGGACGCAGCTATTGTCGAAA-AATaacaatgctggtccttttccgttcaacacatagaatttccgcttcattccagtatagaaatctgtgttggaatttaccctagcaagcctaatgtgtcagtggcaccatacgcatacagtttcttgacatatttttgtgaatggctttcaaatgtttctttttcaactcgtccactattttttgtcaattatattcactgacgcacccatgtcaatgatgaaatcaacatgatgacctccaatactgacccgagtttccagatacatcaacactaacgcacacacatcatcagattcagaatctaacatctggactttccctcgtttgtcaaatttccgtttatttgatttgggtttcgtcatacaagtgatacaacacttcatgaaatatcctatctgaccacactttctacagttctgatcccttacaggacatgaaagatcccttgcaaagtgcccttgtttcccacagcgataacactttttaacatatttctcattctcacctttgcgtttttgtttcccattgttgccatgaattctgtttcctgacggtgctgtttctgtatccatgtgttttgcttgaacttctgtcatctctacagtagtctagacactatagttcgtaactgttctaattttaagtcctcccctctctcgagtaacttagcccgaattctgtgagacctacacttttcaataatttgatcccgaatttgttcatcttggtttgcgaagtcacagtacactgcttgctgtctcagtcttatcaaaaactgttctactgtttctttgtcggtttgtgtaattttccggaacactaacgctcatatggaacattcattttattctcaaaatatttgttcagcgttttcacagtcactgtatacacggtgtcatcctgtacactctgaacttcatttaacgtgtaataaatgtctt
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ATTAATTCTGTTCACTGACGGCGCTTTTTCTGTATCCATGTGCTTTGCATGAACGTCTGTCATTTGTACAGTAGGCGCTATGGTTCGTAACTGTTCTTATGATAAGTCCCTAACTTTCTCGAGTAACTTAGCCCTAACTTAATGAGACCAACAATTTTTCCCCCAATTTTTGCAAAGTCACAGTAAAACTGCTTGCTGTCTCATTCTTGTCTAAAATTGTTCTAAAGTTTCTCTCTCATTTTGAGTAATTTTCAAAATACATATATAATTGCTCATACGGAACATTCACTTTATTCGCAAAATATTTATTCAGTGTTTTCACAATCACTGTGTACACGGTGTTAACCCGTACGCTCTGAACTTCATTTAACGTATTGTAAACGTCT
Unaligned ( gi|13 ): TTTCGATTTGAAGAGTAATTCGGGCTGGACTTTTACCGGTCGTGGCTGGGAGTCGATCGATACGCAAGTAAAAATCTTGGGTTCCACCAGCGTGTATTCTTTTTTCCAGTCTCCCCTCAGCGTTTGGCTGTGCACTTTGAAGTAGAGCTTCAGATAATCGGAGATACAGATTTGGATGCTTTTGATGTCCCACATGGGGCCCTGGCTAGAGGGTGTTGTTTGTATTGTCTACTCCCGTTTATTCTAAGGTATTTTTGGAATTCTTCGGATACGAAACTTGCGGACCGTTATCA
Unaligned ( gi|14 ): AACATCTGAACATTCCCTCGCTTGTCAAATGTCCGTTTAGCTGATTTGGGCTTCGATATGCAACATTAACACTTCATGAAATGTCCTATCTGGTCATAGCTTTCTACAATTCTGATCCATGACTAGACATGAAAGATCCAAAGTGTCCTTATTTCCCACATCGACAACATTTTTACATTCTCACCTTTGCGTTTAGATTCCCCATTGTTTCCATGAC
Unaligned ( gi|16 ): TGTTTGATCCCATTTGTACGAGTAAATCTCTTGAATTCCTCTGAAGTGAACTGAGGTCCGTTGTCGCTGACCATAACACTAGGAACTCCATTCCTTGCAAATATGTTTCTAAGGACTTCAATAGTTTTG
Unaligned ( gi|18 ): ATTCTCACCTTTGCGTTTTTGTTTCCCATTGTTGCCATGAATTCTGTTTACTGACGGTGCTGTTTCTGTATCCATGTGTTTTGCTTGAACTTCTGTCATCTC
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111111 111 111 22222222 3333333 11111 222222222 111111 11 11 22222 11 1111 2222 2222 222222222222222 33333333 111111 111111 3333333333333333333333333333333333333333333333333 0000000000000000000000000000000000000000000000000 111 1 111 555555555 22222222222222222 11 44444444444444444444444444444444444444444444444444444 22222222222 111 2222222222222 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1111 2222 1111111 222222222222222 1111111111 111 111111 111 11111111111 11 11111111111 22222 1 111 1 4444444444444444444444 222222 444444444444444444444 666666666666666 111 111 222222 22222222 111 2222 1111 11 111 11 11111 11111111 44444444444444444444444444444 1111 1111 333333333 555555555555555555555555 33333 33333333 111 11 222 1 11 1 1111 11 1 1 11 1 11 22222 11 1111 1 1 1 1 11 1 11 1 1111111 111 22222222 777777777777777777777 2222 1 9999999999999999999 11 1 7777777777777 222 2222 222 11
lowQualScore : 1 1 666666666 6 111 666 1 44444444 1 9999 6 1 3 22 1 2 22 88 4 0 1 0 5555555 1 99999 22222 666666666 4 5 0 11 1 0 666666 5 0 1 55 1 0 11 99 8 3 00000 8 11 7777 0 88 0 777 8 8 8 0 5 8 2222 0 1111 1 1 111111111111111 99 11111111 6 666666 999999 2222222222222222222222222222222222222222222222222 1111111111111111111111111111111111111111111111111 88 6 6 1 555 4 5 7 0 999999 1 0 000 222222222 77 11 5 1 1 77777777777777777 00 1 2 77 66666666666666666666666666666666666666666666666666666 00000000000 777 8888888888888 5 1 55 6 3 1 888 1 88 66 11 1 5 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 2222 5 3333 4444444 5 777777777777777 1 1 5555555555 66 1 1 11 111 1 0 5 1 1 77 0 2 1 8888 777777 0 000 55555555555 5 1 77 66 1 8 66666666666 55555 1 000 2 1111111111111111111111 0 444444 888888 333333333333333333333 1 1 333333333333333 1 666 1 1 11 0 1 5 2 99 1 6 3 0 1 111 999 222 1 0 1 333333 44444444 222 5555 1111 11 9 000 99 8 6 44 99999 9999 1 7 1 1 6 1 3 77777777 1 00000000000000000000000000000 22 999 1 99 7 9999 6 3 77 6 7777 99 1 4444 8 0 99 0 8 1 3 333333333 777777777777777777777777 8 1 33333 1 11111111 1 777 33 0 444 0 1 8 1 11 0 1 6 22 5 1 4 2 33 0 2 3 9 3333 11 1 33 0 0 0 1 0 1 1 33 4 0 11 55555 33 3 6 6 99 7 4444 7 99 3 3 3 3 88 3 88 3 9999999 0 777 3 55555555 1 444444444444444444444 1111 0 0 2222222222222222222 2 33 0 0 0 3333333333333 333 7 8888 333 88
lowQualScore : . . ......... . ... ... . ........ . .... . . . .. . . .. .. . . . . ....... . ..... ..... ......... . . . .. . . ...... . . . .. . . .. .. . . ..... . .. .... . .. . ... . . . . . . .... . .... . . ............... .. ........ . ...... ...... ................................................. ................................................. .. . . . ... . . . . ...... . . ... ......... .. .. . . . ................. .. . . .. ..................................................... ........... ... ............. . . .. . . . ... . .. .. .. . . ....................................................................................... . .... . .... ....... . ............... . . .......... .. . . .. ... . . . . . .. . . . .... ...... . ... ........... . . .. .. . . ........... ..... . ... . ...................... . ...... ...... ..................... . . ............... . ... . . .. . . . . .. . . . . . ... ... ... . . . ...... ........ ... .... .... .. . ... .. . . .. ..... .... . . . . . . . ........ . ............................. .. ... . .. . .... . . .. . .... .. . .... . . .. . . . . ......... ........................ . . ..... . ........ . ... .. . ... . . . . .. . . . .. . . . . .. . . . . .... .. . .. . . . . . . . .. . . .. ..... .. . . . .. . .... . .. . . . . .. . .. . ....... . ... . ........ . ..................... .... . . ................... . .. . . . ............. ... . .... ... ..
lowQualScore : 0 0 888888888 7 777 000 0 22222222 0 3333 7 0 3 55 0 2 55 33 0 7 0 6 7777777 4 33333 44444 666666666 3 4 4 44 0 6 444444 0 6 7 77 3 8 00 00 0 2 00000 0 00 0000 8 88 8 000 0 0 0 8 0 0 4444 7 4444 0 0 888888888888888 22 22222222 7 222222 222222 5555555555555555555555555555555555555555555555555 0000000000000000000000000000000000000000000000000 33 7 7 0 333 0 7 1 7 777777 4 7 000 777777777 99 77 7 4 4 99999999999999999 00 3 7 33 66666666666666666666666666666666666666666666666666666 11111111111 333 1111111111111 7 0 99 6 0 0 000 4 33 77 11 0 7 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 1111 7 7777 7777777 7 000000000000000 1 0 1111111111 99 0 0 44 111 0 2 0 0 1 99 4 7 4 9999 444444 7 000 99999999999 7 9 99 77 0 9 66666666666 66666 4 000 4 3333333333333333333333 7 999999 333333 666666666666666666666 0 7 333333333333333 7 000 4 7 44 4 0 7 2 22 0 7 7 3 0 777 888 000 4 8 0 444444 22222222 444 6666 8888 00 6 888 00 8 0 22 99999 0000 0 2 0 0 7 5 5 77777777 0 88888888888888888888888888888 55 222 0 22 3 0000 7 7 33 7 8888 22 0 2222 0 8 44 8 0 4 2 888888888 444444444444444444444444 0 4 22222 4 66666666 0 000 22 6 888 6 0 0 0 55 8 0 5 88 0 2 2 5 22 0 5 2 2 2222 00 0 88 2 0 0 0 2 0 0 88 2 0 22 00000 88 2 7 7 22 3 2222 3 22 3 3 3 3 33 3 33 3 8888888 8 555 2 22222222 0 000000000000000000000 2222 0 2 5555555555555555555 5 88 0 7 7 3333333333333 333 3 3333 333 33
consensus : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAA--C--CAGACGTTTGTAAC---A-TAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCTT----AAGTTC---------AGTCTTT----CA-ATTTCCCATCC-CGGA---------ACAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
Reference ( family-2956 ) : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAA--C--CAGACGTTTGTAAC---A-TAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCTT----AAGTTC---------AGTCTTT----CA-ATTTCCCATCC-CGGA---------ACAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|1 : TCGGTTTTACTGGTTTTGGCTT----GCAG-GTGTCTGTCAGTAG-ATGACACTGACTACACGCTTTG--------ACAAA-T--ATCTC-TGCCTCCGTGTCCATTCCTGGCCACCATACCTTTTCTCTCAGTCGCTGTTTCGTACGTACAATTCCCTAGTGACCTTCGTGTGCCAG--AGAAATTGTA-----TTTTTTC-TAAGAAGTTT----TG---GCA-TCATAATACGAGTTCCACATACATGTAGCAC--AATGCCATCAACGACTGACAATTC--TGAATG-TAT-CCTGCGCAAC-----TCCGT--GTTTTGAAAATTG-TT--GTCTGT----CTTGATCCCAT-TTATGATGTCTG--TTA-TTTCA---TGATCCTTT---GAGGATTC-----------CTCGCGAATGTCGTG----AA-GGCTTT-GGGTA----CAGC------GTTCCTTGCAA-TAAA----------A-TA------CG--CAT----ATT------CA--TCTG----CGACGTTTCTGGAC--TTTCC-------CGT-TGAAAG--TT-G----GCCAAGGCGAGACA-GCGCATCAGCG--GCGT-TCTTAGGTCCT-AG---AATGTAC---ACTAAC------T--TAAACATGT-ATGGCTG-AAGCCT---AA-GTGTCC-AGCGTTCGATTCTA-ACG----GGC----GGTTTTGATTTT--GGTGAAA-----ATA----T-A-----CCA-----GTAAGTGGTTTGTGATCTGTC-CAGAT-----------C-TCACACT-TAAGCCCATAAACGTACATGTG--GAATCTCTCGCATCTAAAT-ACTACCCCCAGTGCTTC-TCTCTC-C--GTCT---GA----G---------A-A-----T-A--------CAG-------T----------TT-------------------CTCGACATCAGTAA---GATAGCGAC----AGGCTTA-AATGATCC--A-----TCATTCTGTTT------TT--GGACCAGTAT--AGCACCCAGA-CCTACGGG--ACTCGCGTCGACTATGA-C--TC-T---GGT---TCCT---GA-TT-TTGGGTTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT--TCA---GC-TCG-TCGAA----TGCGTCCTC-TTGCTGTTTG---GTCCATCT--CCA-----------G-C-TCACGTTCTTCTTGGTCAA-C--------TCG--AGCGG-CGCAGCTATTGTCGAAA-AATTTGATATGAACC--GGGCACAGTA-GTTTGCAAGTCCAAGGAAACTCCGCA---CTTCCGAGCTGTTTGATGGTTTAC--GCGTCTC--G-GTT---A----CTACCTTGATTTTCTC-T--TCGTCC-GGCC--GTATTCC-C--TCTGCTGAGATTATGTGTCCGAGAAA-AACAATTTCTGATAGACC-GAACTTGCACTTTTCACGGTTAAGCGTAAAACCCTTT-TGCA--TCAATCTAT---C-----TA-----GTAACTTTGAT--AGTTTTTCATCATGAT-TGGCCT--GGTCGGCG-CCATACA-CAACAATGTCGTCAGAGAGATTTCGTACTCCCTT-CA-GAC--CCTG----AATCACTTGACCAATGACT-CTTTGGTAT-ATTTC-GGACGCAGACGAAATTCCGAA--CATCAGCCGTTTATAGCGATA-TAAACCGTCATGTGT-TGT-GAATGTTGT----AATTTCCCT---TGACTCCTCGTCAAGTTCAATTTGGTGATACCCCA--TCGA-AGGTCTAGTTTCGAAAAGACTTTACTTCCATTCATGTC-CTCTAGTATCTCGTCAACAGTTGGTATCGGATGACGCTTC-CGTCTTACTGCTAT--CTTTG-CGCGACGCATGTCGACACAGATTCGAATTT--CGTCATTTTTCTTC-----GAG--ACTACG-------------ACC-CATGC--TGACGGCTCATCAACTTT----TTCGATGATG--TCTT
gi|10 : ttttccgattgaagagtaattcggctggacttttaccggtcgtggcatgcggagtcgatcgatacgcaagtaaaaatttgggtaattcttttttccagtctcccctcagcgtttgcggctttgatggccttcagtagcgtgcgattttgacttccccgttcccctggggccaatagggtgttgtttgtatgtgtctaactcccgtttattctaaggtattctttgaattcttcggatacgaactgcggaccgttatcacaacgaatgctttgaggaataccgtgtctcacaaacattgcttccatctgtagaattatcctttcactggttatttttttaggatagctacttcttgatatcttgagaagtaatcgacgactaccagaaggttctctcccgagggaaatggtcccgtctcatcaaatcaatagccaaatcttgccacggtccatcgggcattggtgGCTCT---C------TT--GCGTCAGTAT--AGCCCCTAAG-CCAACAGG--GCTGGCGTCAACCACAACT--TC-GATAGGT---TTGTTCG--------GG-TTGTAATATGAAATTA-CGATAT--CGCTGGA-CAA-G---GTT-TTGA---GTTTT--TCAAA----C----CCACTTTCCTGCTCAGATGCCCATTG--CCAAT----C-GGTATC-CGA-A--CGTGTTAGACGG-C--G------A---AGCGG-TTCGCTCACAGTGGAAT-AGTCAGGTATTAACCTGGAGCAGTATGCGGTC---ATTCCCAGGAAGCTCCTGA---TTTCAtatcctctagctcgtctagcttcttgcgcattgctttcctgacgttgaacggtaaacgccttagaggttgagctactggcataacagcgtcatcaaggtgaattttcaggcgaaagtttttcagtttgcct
gi|11 : caattctaagcggaggtttggggcgtttccaaatgccaagtaaaggtttatgatcggtgaccacacggaagtgaggcgcacctctcaggtacatatcaaaatgttcgcaagcccagataatagctaacgcccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngatgtagcgcgattctggtccgctgagtgataggcttgcacaagcaacaactttTAATGTTGTTGGTTTGATAGGTTCTGGTTT--TGGAAATGCG-CT---GGTAATCTGACATCCATGACATAATTTC--------ACATA-T--TTCTC-CACGTCTTTGTCCATACCTGGCCACCAAACTTTATTTCTCAACTGCTGCGTAGTACCCACTAATCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATCCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTA--CGTAAT-GGTAAATAAT-----TAC-T--AT----AGGATTGATCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-AATTGGACAA-GTTCC---TCATCCTTCCTAGAAGCTctcgcattggagggacgttgcacgtcttgaatagcggacattttctcggggtacggcgagataccagctttactgaacactattccaaagaaggtgattcggtcagagttgaattcacatttgaacggttcagcattagtccat
gi|15 : ataacgactgaaatagtccaccaacaacaacatattgcctgtagtgttaacggccaagcagatctatcgctaaatcttgccgcaatccagttggTATCTC-AGTCTTCCGGAATTCACACTTGTCACGGTTCAGTTT-CAGTCC-TG---------AATC-CT---GGATTCTGC----GGAACACTG-TCAAGCCTGTCATCATGCTCCTTACG--GGTTT--T-CCATGAATCAA-GATATCATCAATGATAACCTCTACTCCC-T---CGATTCCATGTAGTAATT--CTGTCA
gi|17 : AGACGCTTGTAAC---AATAAAT-GCCAAGTGTGTACTGAATGTAGTTATAAATCT-----G--GAGTTTGGGTGAAGCTCAAGTTGGTGAT-ATCCCCTGCGT-AGATCCAtctt
gi|19 : ttgCTGGGTGACCTTCGTGAGCTAA--T----TCCAAAACG-TGTGTTCGCAA-----TT----CAGTCGGAATAACAATTCGGGTCCCTC------GGAGAATTAGTTTTCCAATGCAAC--ACAATT
gi|2 : TAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAA--TTTTTA-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTC-GCA-TTGGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTC-TTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA----A----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAA--C--C-----TTTGTA------------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTT---GTCAATATGTA-----GC-TTCAACTT----AAA------------AGTCTTT----CA-ATTTCCCA-------------------ATTCAGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|3 : TCGGTTTTATCGGTTCCCGTT----------GCA-CG---TGT----TGTCACCATTGACATGTATTCATGCCTTGACAAA-TAATTTTC-AACTTCTGTGT---------GCCA--ATACTTTTTCGCGCAGCCGTTGTTTG------ACTATTCCTTGATGTCCCTCATGTGCAAGAAA----TTGTAT---CCTTCCTCATAG--ATTTT---------GGCATAAGTATTCGGGTTCCGC------GTAATAC--AATACCATCAAAAACTGAAAATTC
gi|3 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgTTCG---CGATCCTTT---GATGATTCCCTCC---AAACT-TCG--T--CGATTGTGAG-GGCTTTTGGA-A----CCGC------ATTCCTTGCAATC--A--TCT--G-CAATATGTC---T--CAC-----TT------TG--TCTG----C-----TTC---------------------A-T-----------TCTGACTAAGAAGTGGCA-AAGCATCAGCGGCAT-T-TTT-AGGTCCT-GGCG---TGTAT---ACTAGGACTAGCT--TGAACGTA--ATGGCTGTAG---TCGAAGCGT-AC--AGCGCTCAATCCTT-AC--C-GG-----TGGCTTCGATTTCGGCGAGAAA-----ATA----TATG----TCA-----GC----GGTTTGTGGTCCGTC-CAGAT-----------T-TCGAATT-CAAGCCCATAAACGTATATGTG--AAATCTCTCACA-GCCAAAGACTACTCCTAGTGCCCC-TCGCTCCGT-TTGT---GA----AT--------A------TT-GTTTCTCGAC-G-------TCGGTTAGAGATCT-----------------GCTTG----C-GTA----GGCA--A-C----GGGTTTA-A-----AC--GAT---CCGTCCC---CCTGTTTTT--GTGACATTAT--AGCTCACAGT-CCTACGGG--ACTCGAATCAACTATAA-TATTA-T---CCT---TGTTTCGGACTT-TCGG-TTGTA--ATAC-ACCAGTGTTT-----------CAA-A-----TCTTCAAACGCATC----------------CT--GGTGCCGTTTG---GTCCACTT--CCAAA----C---TG-C-A----TTCTTTCTAGTCAA-TTAA----CGC---AAAGG-TGCAGTAATCGTTGAGA-AATTCTGTATGAACC--GCCCACAATG-ATTCGCCAGTCCCAGGAAGCTTCGTA---CTTCAG---CACTATTTG-----TTGACTTG-C--GTGTTTCTGACACCGCT-TTGATCTTCTCG---TCGT-CCGGTCGACTATCACGTGTACG--GGA-AACACGATCCTCGTAAA---------------GTC--AAATTTACATTTTTCACGATTCAAAGT-AAGGCCTT--TCTTAACCAGTCTATCAAG-----TATTTTGGCAA-ACT---------TTTCATCATGAT-CTGCCT--GGTCTGTT-CCATAGA-CAACAATGTCATCGGAGAGATTCCGTACTCCT-T-CAAGAC--CTTG----GATCACTTGACAAATCACT-CGCTGATAGATCTATTAGA-GTTGGtgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacttcgcgatcctttgatgattccctccaaacttcgtcgattgtgagggcttttggaaccgcattccttgcaatcatctgcaatatgtctcactttgtctgcttcattctgactaagaagtggcaaagcatcagcggcatttttaggtcctggcgtgtatactaggactagcttgaacgtaatggctgtagtcgaagcgtacagcgctcaatccttaccggtggcttcgatttcggcgagaaaatatatgtcagcggtttgtggtccgtccagatttcgaattcaagcccataaacgtatatgtgaaatctctcacagccaaagactactcctagtgcccctcgctccgtttgtgaatattgtttctcgacgtcggttagagatctgcttgcgtaggcaacgggtttaaacgatccgtccccctgtttttgtgacattatagctcacagtcctacgggactcgaatcaactataatattatccttgtttcggactttcggttgtaatacaccagtgtttcaaatcttcaaacgcatcctggtgccgtttggtccacttccaaactgcattctttctagtcaattaacgcaaaggtgcagtaatcgttgagaaattctgtatgaaccgcccacaatgattcgccagtcccaggaagcttcgtacttcagcactatttgttgacttgcgtgtttctgacaccgctttgatcttctcgtcgtccggtcgactatcacgtgtacgggaaacacgatcctcgtaaagtcaaatttacatttttcacgattcaaagtaaggcctttcttaaccagtctatcaagtattttggcaaacttttcatcatgatctgcctggtctgttccatagacaacaatgtcatcggagagattccgtactccttcaagaccttggatcacttgacaaatcactcgctgatagatctattagagttgg
gi|4 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgtcggttttatcggttcccgttgcacgtgttgtcaccattgacatgtattcatgccttgacaaataattttcaacttctgtgtgccaatactttttcgcgcagccgttgtttgactattccttgatgtccctcatgtgcaagaaattgtatccttcctcatagattttggcataagtattcgggttccgcgtaatacaataccatcaaaaactgaaaattctgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacTAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAATTTTT--A-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTC-GCATT-GGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTCTTTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA----A----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAA--C--C-----TTTGTA------------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCT
gi|5 : ACGATGACTGGACTA-ACCTCATGG--TGTTTGATCATCGACTTTTCGGCTCGATAATGCTTCCTGAGATTTCCAGTTCCCTCAGTGCTAATAAAGGAAATTCGGTATGATTTGGCTTTGCGCTTGAAGGCAAGTTCTACTTGTTCTTTGTCAATA-ATAGATAGGCATTCACTTTAGTAAAGTTCTTTTTCTATATTTTTTTTGCCATATTTCTCATCT-CAAAACACCTTATACAGATAGAAAATTA--TTGAATCAATGCCGTCCAGCCCTACGATTCTGTTTACAAGTATTAATCTCTTCAAGCTTC--AACACCCTAAAGGTCGCCATTGCGGGGTTATTCTTTCGCCC
gi|6 : TCTGCC--ATGT-TCT-CCTTCCCTGGTGCA---TAC---TTTA--------TGGTAAACTTAT-AGGGTTG-GAGAC---AAA-GT-CCCCATCTTTCAATGCGAAGTG-A-TGGAC-GCGTCTTC--TGCC-----AGAT-----AGT----T-T-----CCA-----GC----GGCTTGTGATCTGTAA-TGATAGTGGAAGTGGT-GCAAGCTGCTTAA--ATACAGATCAAAGTG--------CTCACAAGCCCAT-GTTATCGCTAAGGCTTC-TCGCTC-C--GTCT---GACTGTATCTCGACTCA-A----CT-G--------G-GGTAAGGGC----------TCT-----------------GCTTG----C-ATAG-C--ATAGTA-A----GCATGCC-A-----CTCTG-----TCATCGT---C------TT--GAAGCATAAT--GGCTCCCAAA-CCGACTGG--ACTTGCGTCTACTCTAA-T--TGTG---ACTGATTTCTGTGGA-TC-ATGA-T------ATGCTATGA-CATCATCAC---TGCACAG-GCT-GTCCTTCA---ACTTA--AGGAA---------------TGCT-TT------TTCACAC--CTAGAGTCCC-AATG-CCAGG-ATTTGTCTTTGTGAG-T--GAGTTCTCTG-AGAGG-T-TGATAAATGTCAGTATAGTTCTTTATGAAAC--GTGAACTGTA-GTGCGTACTTCCTCAGAATCTCCTAAAGTCTTTA---ACGTTCTGCGGCCTACTGAATTC-CTGG-ATT---G----CG---TTGACCTTTTCGGGGTCG----GGTG--ATAT-GC-CACTGTC-TGAAAACACA-ACACCGAAAAATGAAATCCT-GTTTGTTCTGAATTCACATTTATTACGGTTTACAGT-CAGGCCATGCTCCC--TCAGCCTTTCGAG-----TAC----TCTA---TG-T--AGTGCCTGGTCATG---CTGCTTAAGGTCTGTT-CCGAAAA-TCACAATATCATCGGATATGTTT-GTGGTACC-TGTATATT--CCTG----AATTAGCTGTCGAATAGTTTCGTGGA-AT-ATTTCTGAT-GCTGACG-TATACCGAAGTT--GAGACGCTTGTAAC---A-TAAAT-GCCAAGTGTGTAT-GAATGTAGTTATAAATCT-----G--GAGTTCTGGT-GAG-TCAAGTTGGTGAT--TTCCCTGCGGTAGATCCAGCTTGCTGAACACCTTGCT-CCGTTCAGGTC-CAATATAAGTTCCTCTATAGTAGG--TAGAGTG-TGTT---CG-------GCTGCTTATTGGCCTCC-CTCATATCAACACATAAGCGAATCTTCCTCCG-TT--CTTCTTAGTGGGTCACTA-------TGGGCGATACC-CATGGATTGGCTCACCATCGCC--T----CTCAATGATA--TCCTgcaatctaatgcttagagtgaccctatttcacgtaataactatacacatagacattacccgcggttgtacaatattttaccagtaataaataattttgaaaatatcatagaatcgtattgttgggaaattaattaacccttattagcaaagactcctaattgttgttcatgttggcaccacatagttacgcatttgagcaagtttctagacatcatatatttactgaataggagcattattccaaatgttatcattttatgcaacctgcaagtcgtctccactatctttttgtcaattgatattcactgactgcgaccactgcaagtattgaaatcatactatgatgactctccaatacctgagacgtttccagaatacataaatgactcacaaacacaatgcaacacacattcaagctttgcagaatctaacagtctgacactttcccctcgtttgtcaaatcttccgtttaattttgagttgggtttcgtcaatacaagtgatacaggacacggttcatgaatatatctacttgaccacgaaacttgtctacatgtgaatctgatccttacaggacatgaaaagatccctgcaagtgcctactatgtttcccacagcgaataacacattattttaaaccatatttgtcaatttcacctttgcgtttttgtttcccattccgttgcctgaatgattctgttgtcctggagggggttgtttcttgtatccatgtgttttgcttgaacttcgtcatcgtgctaccagtagtctagacacaaagtttcgtaactgttctattttaaagtcactccctctctctgagctaacttagcgccgtgattctgtgagacctacatcttttcaataatttgatcccgatttgaattcactcttggtttgccgcaagtcacagtcacttgcttgcctgtctcagtcttatcaaaaaactgtgtctactgtttctttgtcggtttgtgtaattttcggaacagctaacgctctaatttgaacattcattgttattctcaatcaaatattttgtcatgcgttttcacagtcactgt
gi|6 : tgatatgtagTGTGC---TA--CACGTTGTACCGATTC---ATCAATATGGA-----TT-TTCACCTG----ACGTTC------------CTTT----CA-TTTTCCTATCCTCGGA---------ACAGTCTGGAAACTCGTTTCAAC-AGTGTCtctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttctgtgctacacgttgtaccgattcatcaatatggattttcacctgacgttcctttcattttcctatcctcggaacagtctggaaactcgtttcaacagtgtc
gi|7 : tgatatgtagtctgccatgttctccttccctggtgcatactttatggtaaacttatagggttggagacaaagtccccatctttcaatgcgaagtgatggacgcgtcttctgccagatagtttccagcggcttgtgatctgtaatgatagtggaagtggtgcaagctgcttaaatacagatcaaagtgctcacaagcccatgttatcgctaaggcttctcgctccgtctgactgtatctcgactcaactggggtaagggctctgcttgcatagcatagtaagcatgccactctgtcatcgtcttgaagcataatggctcccaaaccgactggacttgcgtctactctaattgtgactgatttctgtggatcatgatatgctatgacatcatcactgcacaggctgtccttcaacttaaggaatgctttttcacacctagagtcccaatgccaggatttgtctttgtgagtgagttctctgagaggttgataaatgtcagtatagttctttatgaaacgtgaactgtagtgcgtacttcctcagaatctcctaaagtctttaacgttctgcggcctactgaattcctggattgcgttgaccttttcggggtcgggtgatatgccactgtctgaaaacacaacaccgaaaaatgaaatcctgtttgttctgaattcacatttattacggtttacagtcaggccatgctccctcagcctttcgagtactctatgtagtgcctggtcatgctgcttaaggtctgttccgaaaatcacaatatcatcggatatgtttgtggtacctgtatattcctgaattagctgtcgaatagtttcgtggaatatttctgatgctgacgtataccgaagttgagacgcttgtaacataaatgccaagtgtgtatgaatgtagttataaatctggagttctggtgagtcaagttggtgatttccctgcggtagatccagcttgctgaacaccttgctccgttcaggtccaatataagttcctctatagtaggtagagtgtgttcggctgcttattggcctccctcatatcaacacataagcgaatcttcctccgttcttcttagtgggtcactatgggcgatacccatggattggctcaccatcgcctctcaatgatatccttctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttcGTTTCATTGGCTCAGGTTTACTAGGTT-GAC-CT---ACTA-T-TGACAACCAAAACATACTTTT--------GCAAAAC--TTCTCATACTTCTT-ATCCATCCCTGGCCACCAAACTTTGCTTCTTAATAGCGACTTCATGGCAACAATGCCTGGATGTCCTTCATGTGCAAG--A----TCAAGAACCCTATCA-CGCA-----TTTGTGGTG---GGAAT-AC-ATTCGCGTACCTT------GTAATACTAATTTCCCAATAGAAC--ACAATTCACCC--CT-TATTGGCAA-TACTGTTTGTAC-TCAAT----ACGAT-G---CCA-CTGTTG--ATTGA-CAGACATTGCTA-ACA-GCACAAAGCTCGGGGTCATTCT--CT-GATGTCTC--TCT---TATCTCACG--AGTTGTC----AT-AGCAAT-GGG-GAAGGTTGC------TTCTTCAGCTA-C-AA--CCT--AACA-TA-ATCATCTACCAG----ATCAGAAGACT--TCTG----CA-----------------CT-------AAA-T------CAT-TCCT-AACAAGACGTGAAA-GCGTGTCCGCT--ATAT-TCT-TCGGACC---TGAAATGTACCGAACC---------T--TAAAAGTGT-G-GGTTGCATG-CGCAACA----CCC-ATCGTTCTATTCTA-GCG-C-AGACCTTTGACTT---------TGTAGAATATATACA----T-T-----CTA-----GC----GGTTTGTGGTCAGTGA-GAAG-----------C-TCAAACT-CTACACCGTATATATAAACATG--AAATCTTTCACATGCCCAT-ACGAGGGCTAGCGCCTC-TTTCTC---AGTCTGA-GA----GT--------A-C----CG-A--------C-G-------T----------TCTGTATCACTCAAGCTACGGCTTG----C-ATAAGA-GATAACC-C----GAAATTC-A-----CC--G-----TCTTGTT---C------TT--GCACCAGCAC--GGCGCCTAAT-CCAACAG
gi|8 : tttcgaccaaacagtaactgagacggacaaacaccagtcgtggtgtgtggggtatttcgatacataatcagaaatttgtcaagttcagatttccaatctcgaccttcggcatgagcaattcaaacacgtttcaaaattgacctattttatcgttccacctcgccgttcgcctgcggccataaaaggagtccattctggtgatgaagactattgccgttttctaacataaattctttaaaatttgactcgcaaattgaggaccattatcagtatgaattgaaaacagtagaccatgagtaaaaagaactttgacattaacgccatgatattctcagacgttgtttttgtaaactgccattcaaaatatctactgtaataattaactagtacaaaaatatactctttactcgcaatggacctaaaacgatcagggcaagatgtgccatggcgcagaaggtaattctgtgcACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTT---GTCAATATGTA-----GC-TTCAACTT----AAA------------AGTCTTT----CA-ATTTCCAAT--------------------TCAGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|9 : TTCA---TGATCCTTT---GAGGATTC--CTCGCGAAT-----G--TGTTGA-----A--GGCCTT-TGG-G----TTACATTGCGTTACCTC-CTC-CTAA--CAT--A-CA-GA-ATA--C---CGGCATTATT------CTCTTCTGACATCG---TTTCTGGACTTTCCCCTAGCATTAGAACA---G-TTTCGGCT---CAAGGCGAGACAAGCGCATCAGCGT-GCGTCTCT-AGGTCCT-AGT--AATGTAC---ACTAAACT----T--CAAACATGTCATGGCTG-AAGGCCTAAGCTGT-CC--AGCGTTCGATTCTA-ACG----GGCG-GTTA-TTG--ATTG--TGGATAG-----ATAGTAAT-TATATACCATGTAAGT----GGTATGTGATCTGTC-CAGAT-----------TCTCACACT-TAAG-CCATA-ACGTACATGTGGCAATTCTCTCGCAT--CTAA-ATTACCCACAGTGCTTC-TCTCTC-C--GTCTTGAGA----AT--------ACAGTTTCTCA--------C-A-------T----------TCA-----------------G-TAA----G-ATAG-C-GACAGCT-TAAATGAATTCCGA-----TC--ATGCATCTGTGTT---C------CTTGGGACCAGTACTTAGCACCCAGAACTTACGGGCAACGCGCGTCGACTATGA-C--TC-T---GGT---TCCTT---A-TTATTGG-TTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT-TTCA---GC-TCGTTCGAATGCTC----CTCCCTTGCTGTTTG---GTCCATTCATCCAAG----C---T--C-A-C-GTTCTTCTTGG-CAA---------CTCGAAAGCGGACGCAGCTATTGTCGAAA-AATaacaatgctggtccttttccgttcaacacatagaatttccgcttcattccagtatagaaatctgtgttggaatttaccctagcaagcctaatgtgtcagtggcaccatacgcatacagtttcttgacatatttttgtgaatggctttcaaatgtttctttttcaactcgtccactattttttgtcaattatattcactgacgcacccatgtcaatgatgaaatcaacatgatgacctccaatactgacccgagtttccagatacatcaacactaacgcacacacatcatcagattcagaatctaacatctggactttccctcgtttgtcaaatttccgtttatttgatttgggtttcgtcatacaagtgatacaacacttcatgaaatatcctatctgaccacactttctacagttctgatcccttacaggacatgaaagatcccttgcaaagtgcccttgtttcccacagcgataacactttttaacatatttctcattctcacctttgcgtttttgtttcccattgttgccatgaattctgtttcctgacggtgctgtttctgtatccatgtgttttgcttgaacttctgtcatctctacagtagtctagacactatagttcgtaactgttctaattttaagtcctcccctctctcgagtaacttagcccgaattctgtgagacctacacttttcaataatttgatcccgaatttgttcatcttggtttgcgaagtcacagtacactgcttgctgtctcagtcttatcaaaaactgttctactgtttctttgtcggtttgtgtaattttccggaacactaacgctcatatggaacattcattttattctcaaaatatttgttcagcgttttcacagtcactgtatacacggtgtcatcctgtacactctgaacttcatttaacgtgtaataaatgtctt
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ATTAATTCTGTTCACTGACGGCGCTTTTTCTGTATCCATGTGCTTTGCATGAACGTCTGTCATTTGTACAGTAGGCGCTATGGTTCGTAACTGTTCTTATGATAAGTCCCTAACTTTCTCGAGTAACTTAGCCCTAACTTAATGAGACCAACAATTTTTCCCCCAATTTTTGCAAAGTCACAGTAAAACTGCTTGCTGTCTCATTCTTGTCTAAAATTGTTCTAAAGTTTCTCTCTCATTTTGAGTAATTTTCAAAATACATATATAATTGCTCATACGGAACATTCACTTTATTCGCAAAATATTTATTCAGTGTTTTCACAATCACTGTGTACACGGTGTTAACCCGTACGCTCTGAACTTCATTTAACGTATTGTAAACGTCT
Unaligned ( gi|13 ): TTTCGATTTGAAGAGTAATTCGGGCTGGACTTTTACCGGTCGTGGCTGGGAGTCGATCGATACGCAAGTAAAAATCTTGGGTTCCACCAGCGTGTATTCTTTTTTCCAGTCTCCCCTCAGCGTTTGGCTGTGCACTTTGAAGTAGAGCTTCAGATAATCGGAGATACAGATTTGGATGCTTTTGATGTCCCACATGGGGCCCTGGCTAGAGGGTGTTGTTTGTATTGTCTACTCCCGTTTATTCTAAGGTATTTTTGGAATTCTTCGGATACGAAACTTGCGGACCGTTATCA
Unaligned ( gi|14 ): AACATCTGAACATTCCCTCGCTTGTCAAATGTCCGTTTAGCTGATTTGGGCTTCGATATGCAACATTAACACTTCATGAAATGTCCTATCTGGTCATAGCTTTCTACAATTCTGATCCATGACTAGACATGAAAGATCCAAAGTGTCCTTATTTCCCACATCGACAACATTTTTACATTCTCACCTTTGCGTTTAGATTCCCCATTGTTTCCATGAC
Unaligned ( gi|16 ): TGTTTGATCCCATTTGTACGAGTAAATCTCTTGAATTCCTCTGAAGTGAACTGAGGTCCGTTGTCGCTGACCATAACACTAGGAACTCCATTCCTTGCAAATATGTTTCTAAGGACTTCAATAGTTTTG
Unaligned ( gi|18 ): ATTCTCACCTTTGCGTTTTTGTTTCCCATTGTTGCCATGAATTCTGTTTACTGACGGTGCTGTTTCTGTATCCATGTGTTTTGCTTGAACTTCTGTCATCTC
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111111 111 111 22222222 3333333 11111 222222222 111111 11 11 22222 11 1111 2222 2222 222222222222222 33333333 111111 111111 3333333333333333333333333333333333333333333333333 0000000000000000000000000000000000000000000000000 111 1 111 555555555 22222222222222222 11 44444444444444444444444444444444444444444444444444444 22222222222 111 2222222222222 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1111 2222 1111111 222222222222222 1111111111 111 111111 111 11111111111 11 11111111111 22222 1 111 1 4444444444444444444444 222222 444444444444444444444 666666666666666 111 111 222222 22222222 111 2222 1111 11 111 11 11111 11111111 44444444444444444444444444444 1111 1111 333333333 555555555555555555555555 33333 33333333 111 11 222 1 11 1 1111 11 1 1 11 1 11 22222 11 1111 1 1 1 1 11 1 11 1 1111111 111 22222222 777777777777777777777 2222 1 9999999999999999999 11 1 7777777777777 222 2222 222 11
lowQualScore : 1 1 666666666 6 111 666 1 44444444 1 9999 6 1 3 22 1 2 22 88 4 0 1 0 5555555 1 99999 22222 666666666 4 5 0 11 1 0 666666 5 0 1 55 1 0 11 99 8 3 00000 8 11 7777 0 88 0 777 8 8 8 0 5 8 2222 0 1111 1 1 111111111111111 99 11111111 6 666666 999999 2222222222222222222222222222222222222222222222222 1111111111111111111111111111111111111111111111111 88 6 6 1 555 4 5 7 0 999999 1 0 000 222222222 77 11 5 1 1 77777777777777777 00 1 2 77 66666666666666666666666666666666666666666666666666666 00000000000 777 8888888888888 5 1 55 6 3 1 888 1 88 66 11 1 5 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 2222 5 3333 4444444 5 777777777777777 1 1 5555555555 66 1 1 11 111 1 0 5 1 1 77 0 2 1 8888 777777 0 000 55555555555 5 1 77 66 1 8 66666666666 55555 1 000 2 1111111111111111111111 0 444444 888888 333333333333333333333 1 1 333333333333333 1 666 1 1 11 0 1 5 2 99 1 6 3 0 1 111 999 222 1 0 1 333333 44444444 222 5555 1111 11 9 000 99 8 6 44 99999 9999 1 7 1 1 6 1 3 77777777 1 00000000000000000000000000000 22 999 1 99 7 9999 6 3 77 6 7777 99 1 4444 8 0 99 0 8 1 3 333333333 777777777777777777777777 8 1 33333 1 11111111 1 777 33 0 444 0 1 8 1 11 0 1 6 22 5 1 4 2 33 0 2 3 9 3333 11 1 33 0 0 0 1 0 1 1 33 4 0 11 55555 33 3 6 6 99 7 4444 7 99 3 3 3 3 88 3 88 3 9999999 0 777 3 55555555 1 444444444444444444444 1111 0 0 2222222222222222222 2 33 0 0 0 3333333333333 333 7 8888 333 88
lowQualScore : . . ......... . ... ... . ........ . .... . . . .. . . .. .. . . . . ....... . ..... ..... ......... . . . .. . . ...... . . . .. . . .. .. . . ..... . .. .... . .. . ... . . . . . . .... . .... . . ............... .. ........ . ...... ...... ................................................. ................................................. .. . . . ... . . . . ...... . . ... ......... .. .. . . . ................. .. . . .. ..................................................... ........... ... ............. . . .. . . . ... . .. .. .. . . ....................................................................................... . .... . .... ....... . ............... . . .......... .. . . .. ... . . . . . .. . . . .... ...... . ... ........... . . .. .. . . ........... ..... . ... . ...................... . ...... ...... ..................... . . ............... . ... . . .. . . . . .. . . . . . ... ... ... . . . ...... ........ ... .... .... .. . ... .. . . .. ..... .... . . . . . . . ........ . ............................. .. ... . .. . .... . . .. . .... .. . .... . . .. . . . . ......... ........................ . . ..... . ........ . ... .. . ... . . . . .. . . . .. . . . . .. . . . . .... .. . .. . . . . . . . .. . . .. ..... .. . . . .. . .... . .. . . . . .. . .. . ....... . ... . ........ . ..................... .... . . ................... . .. . . . ............. ... . .... ... ..
lowQualScore : 0 0 888888888 7 777 000 0 22222222 0 3333 7 0 3 55 0 2 55 33 0 7 0 6 7777777 4 33333 44444 666666666 3 4 4 44 0 6 444444 0 6 7 77 3 8 00 00 0 2 00000 0 00 0000 8 88 8 000 0 0 0 8 0 0 4444 7 4444 0 0 888888888888888 22 22222222 7 222222 222222 5555555555555555555555555555555555555555555555555 0000000000000000000000000000000000000000000000000 33 7 7 0 333 0 7 1 7 777777 4 7 000 777777777 99 77 7 4 4 99999999999999999 00 3 7 33 66666666666666666666666666666666666666666666666666666 11111111111 333 1111111111111 7 0 99 6 0 0 000 4 33 77 11 0 7 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 1111 7 7777 7777777 7 000000000000000 1 0 1111111111 99 0 0 44 111 0 2 0 0 1 99 4 7 4 9999 444444 7 000 99999999999 7 9 99 77 0 9 66666666666 66666 4 000 4 3333333333333333333333 7 999999 333333 666666666666666666666 0 7 333333333333333 7 000 4 7 44 4 0 7 2 22 0 7 7 3 0 777 888 000 4 8 0 444444 22222222 444 6666 8888 00 6 888 00 8 0 22 99999 0000 0 2 0 0 7 5 5 77777777 0 88888888888888888888888888888 55 222 0 22 3 0000 7 7 33 7 8888 22 0 2222 0 8 44 8 0 4 2 888888888 444444444444444444444444 0 4 22222 4 66666666 0 000 22 6 888 6 0 0 0 55 8 0 5 88 0 2 2 5 22 0 5 2 2 2222 00 0 88 2 0 0 0 2 0 0 88 2 0 22 00000 88 2 7 7 22 3 2222 3 22 3 3 3 3 33 3 33 3 8888888 8 555 2 22222222 0 000000000000000000000 2222 0 2 5555555555555555555 5 88 0 7 7 3333333333333 333 3 3333 333 33
consensus : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAA--C--CAGACGTTTGTAAC---A-TAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCTT----AAGTTC---------AGTCTTT----CA-ATTTCCCATCC-CGGA---------ACAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
Reference ( family-2956 ) : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAA--C--CAGACGTTTGTAAC---A-TAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCTT----AAGTTC---------AGTCTTT----CA-ATTTCCCATCC-CGGA---------ACAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|1 : TCGGTTTTACTGGTTTTGGCTT----GCAG-GTGTCTGTCAGTAG-ATGACACTGACTACACGCTTTG--------ACAAA-T--ATCTC-TGCCTCCGTGTCCATTCCTGGCCACCATACCTTTTCTCTCAGTCGCTGTTTCGTACGTACAATTCCCTAGTGACCTTCGTGTGCCAG--AGAAATTGTA-----TTTTTTC-TAAGAAGTTT----TG---GCA-TCATAATACGAGTTCCACATACATGTAGCAC--AATGCCATCAACGACTGACAATTC--TGAATG-TAT-CCTGCGCAAC-----TCCGT--GTTTTGAAAATTG-TT--GTCTGT----CTTGATCCCAT-TTATGATGTCTG--TTA-TTTCA---TGATCCTTT---GAGGATTC-----------CTCGCGAATGTCGTG----AA-GGCTTT-GGGTA----CAGC------GTTCCTTGCAA-TAAA----------A-TA------CG--CAT----ATT------CA--TCTG----CGACGTTTCTGGAC--TTTCC-------CGT-TGAAAG--TT-G----GCCAAGGCGAGACA-GCGCATCAGCG--GCGT-TCTTAGGTCCT-AG---AATGTAC---ACTAAC------T--TAAACATGT-ATGGCTG-AAGCCT---AA-GTGTCC-AGCGTTCGATTCTA-ACG----GGC----GGTTTTGATTTT--GGTGAAA-----ATA----T-A-----CCA-----GTAAGTGGTTTGTGATCTGTC-CAGAT-----------C-TCACACT-TAAGCCCATAAACGTACATGTG--GAATCTCTCGCATCTAAAT-ACTACCCCCAGTGCTTC-TCTCTC-C--GTCT---GA----G---------A-A-----T-A--------CAG-------T----------TT-------------------CTCGACATCAGTAA---GATAGCGAC----AGGCTTA-AATGATCC--A-----TCATTCTGTTT------TT--GGACCAGTAT--AGCACCCAGA-CCTACGGG--ACTCGCGTCGACTATGA-C--TC-T---GGT---TCCT---GA-TT-TTGGGTTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT--TCA---GC-TCG-TCGAA----TGCGTCCTC-TTGCTGTTTG---GTCCATCT--CCA-----------G-C-TCACGTTCTTCTTGGTCAA-C--------TCG--AGCGG-CGCAGCTATTGTCGAAA-AATTTGATATGAACC--GGGCACAGTA-GTTTGCAAGTCCAAGGAAACTCCGCA---CTTCCGAGCTGTTTGATGGTTTAC--GCGTCTC--G-GTT---A----CTACCTTGATTTTCTC-T--TCGTCC-GGCC--GTATTCC-C--TCTGCTGAGATTATGTGTCCGAGAAA-AACAATTTCTGATAGACC-GAACTTGCACTTTTCACGGTTAAGCGTAAAACCCTTT-TGCA--TCAATCTAT---C-----TA-----GTAACTTTGAT--AGTTTTTCATCATGAT-TGGCCT--GGTCGGCG-CCATACA-CAACAATGTCGTCAGAGAGATTTCGTACTCCCTT-CA-GAC--CCTG----AATCACTTGACCAATGACT-CTTTGGTAT-ATTTC-GGACGCAGACGAAATTCCGAA--CATCAGCCGTTTATAGCGATA-TAAACCGTCATGTGT-TGT-GAATGTTGT----AATTTCCCT---TGACTCCTCGTCAAGTTCAATTTGGTGATACCCCA--TCGA-AGGTCTAGTTTCGAAAAGACTTTACTTCCATTCATGTC-CTCTAGTATCTCGTCAACAGTTGGTATCGGATGACGCTTC-CGTCTTACTGCTAT--CTTTG-CGCGACGCATGTCGACACAGATTCGAATTT--CGTCATTTTTCTTC-----GAG--ACTACG-------------ACC-CATGC--TGACGGCTCATCAACTTT----TTCGATGATG--TCTT
gi|10 : ttttccgattgaagagtaattcggctggacttttaccggtcgtggcatgcggagtcgatcgatacgcaagtaaaaatttgggtaattcttttttccagtctcccctcagcgtttgcggctttgatggccttcagtagcgtgcgattttgacttccccgttcccctggggccaatagggtgttgtttgtatgtgtctaactcccgtttattctaaggtattctttgaattcttcggatacgaactgcggaccgttatcacaacgaatgctttgaggaataccgtgtctcacaaacattgcttccatctgtagaattatcctttcactggttatttttttaggatagctacttcttgatatcttgagaagtaatcgacgactaccagaaggttctctcccgagggaaatggtcccgtctcatcaaatcaatagccaaatcttgccacggtccatcgggcattggtgGCTCT---C------TT--GCGTCAGTAT--AGCCCCTAAG-CCAACAGG--GCTGGCGTCAACCACAACT--TC-GATAGGT---TTGTTCG--------GG-TTGTAATATGAAATTA-CGATAT--CGCTGGA-CAA-G---GTT-TTGA---GTTTT--TCAAA----C----CCACTTTCCTGCTCAGATGCCCATTG--CCAAT----C-GGTATC-CGA-A--CGTGTTAGACGG-C--G------A---AGCGG-TTCGCTCACAGTGGAAT-AGTCAGGTATTAACCTGGAGCAGTATGCGGTC---ATTCCCAGGAAGCTCCTGA---TTTCAtatcctctagctcgtctagcttcttgcgcattgctttcctgacgttgaacggtaaacgccttagaggttgagctactggcataacagcgtcatcaaggtgaattttcaggcgaaagtttttcagtttgcct
gi|11 : caattctaagcggaggtttggggcgtttccaaatgccaagtaaaggtttatgatcggtgaccacacggaagtgaggcgcacctctcaggtacatatcaaaatgttcgcaagcccagataatagctaacgcccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngatgtagcgcgattctggtccgctgagtgataggcttgcacaagcaacaactttTAATGTTGTTGGTTTGATAGGTTCTGGTTT--TGGAAATGCG-CT---GGTAATCTGACATCCATGACATAATTTC--------ACATA-T--TTCTC-CACGTCTTTGTCCATACCTGGCCACCAAACTTTATTTCTCAACTGCTGCGTAGTACCCACTAATCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATCCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTA--CGTAAT-GGTAAATAAT-----TAC-T--AT----AGGATTGATCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-AATTGGACAA-GTTCC---TCATCCTTCCTAGAAGCTctcgcattggagggacgttgcacgtcttgaatagcggacattttctcggggtacggcgagataccagctttactgaacactattccaaagaaggtgattcggtcagagttgaattcacatttgaacggttcagcattagtccat
gi|15 : ataacgactgaaatagtccaccaacaacaacatattgcctgtagtgttaacggccaagcagatctatcgctaaatcttgccgcaatccagttggTATCTC-AGTCTTCCGGAATTCACACTTGTCACGGTTCAGTTT-CAGTCC-TG---------AATC-CT---GGATTCTGC----GGAACACTG-TCAAGCCTGTCATCATGCTCCTTACG--GGTTT--T-CCATGAATCAA-GATATCATCAATGATAACCTCTACTCCC-T---CGATTCCATGTAGTAATT--CTGTCA
gi|17 : AGACGCTTGTAAC---AATAAAT-GCCAAGTGTGTACTGAATGTAGTTATAAATCT-----G--GAGTTTGGGTGAAGCTCAAGTTGGTGAT-ATCCCCTGCGT-AGATCCAtctt
gi|19 : ttgCTGGGTGACCTTCGTGAGCTAA--T----TCCAAAACG-TGTGTTCGCAA-----TT----CAGTCGGAATAACAATTCGGGTCCCTC------GGAGAATTAGTTTTCCAATGCAAC--ACAATT
gi|2 : TAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAA--TTTTTA-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTC-GCA-TTGGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTC-TTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA----A----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAA--C--C-----TTTGTA------------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTT---GTCAATATGTA-----GC-TTCAACTT----AAA------------AGTCTTT----CA-ATTTCCCA-------------------ATTCAGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|3 : TCGGTTTTATCGGTTCCCGTT----------GCA-CG---TGT----TGTCACCATTGACATGTATTCATGCCTTGACAAA-TAATTTTC-AACTTCTGTGT---------GCCA--ATACTTTTTCGCGCAGCCGTTGTTTG------ACTATTCCTTGATGTCCCTCATGTGCAAGAAA----TTGTAT---CCTTCCTCATAG--ATTTT---------GGCATAAGTATTCGGGTTCCGC------GTAATAC--AATACCATCAAAAACTGAAAATTC
gi|3 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgTTCG---CGATCCTTT---GATGATTCCCTCC---AAACT-TCG--T--CGATTGTGAG-GGCTTTTGGA-A----CCGC------ATTCCTTGCAATC--A--TCT--G-CAATATGTC---T--CAC-----TT------TG--TCTG----C-----TTC---------------------A-T-----------TCTGACTAAGAAGTGGCA-AAGCATCAGCGGCAT-T-TTT-AGGTCCT-GGCG---TGTAT---ACTAGGACTAGCT--TGAACGTA--ATGGCTGTAG---TCGAAGCGT-AC--AGCGCTCAATCCTT-AC--C-GG-----TGGCTTCGATTTCGGCGAGAAA-----ATA----TATG----TCA-----GC----GGTTTGTGGTCCGTC-CAGAT-----------T-TCGAATT-CAAGCCCATAAACGTATATGTG--AAATCTCTCACA-GCCAAAGACTACTCCTAGTGCCCC-TCGCTCCGT-TTGT---GA----AT--------A------TT-GTTTCTCGAC-G-------TCGGTTAGAGATCT-----------------GCTTG----C-GTA----GGCA--A-C----GGGTTTA-A-----AC--GAT---CCGTCCC---CCTGTTTTT--GTGACATTAT--AGCTCACAGT-CCTACGGG--ACTCGAATCAACTATAA-TATTA-T---CCT---TGTTTCGGACTT-TCGG-TTGTA--ATAC-ACCAGTGTTT-----------CAA-A-----TCTTCAAACGCATC----------------CT--GGTGCCGTTTG---GTCCACTT--CCAAA----C---TG-C-A----TTCTTTCTAGTCAA-TTAA----CGC---AAAGG-TGCAGTAATCGTTGAGA-AATTCTGTATGAACC--GCCCACAATG-ATTCGCCAGTCCCAGGAAGCTTCGTA---CTTCAG---CACTATTTG-----TTGACTTG-C--GTGTTTCTGACACCGCT-TTGATCTTCTCG---TCGT-CCGGTCGACTATCACGTGTACG--GGA-AACACGATCCTCGTAAA---------------GTC--AAATTTACATTTTTCACGATTCAAAGT-AAGGCCTT--TCTTAACCAGTCTATCAAG-----TATTTTGGCAA-ACT---------TTTCATCATGAT-CTGCCT--GGTCTGTT-CCATAGA-CAACAATGTCATCGGAGAGATTCCGTACTCCT-T-CAAGAC--CTTG----GATCACTTGACAAATCACT-CGCTGATAGATCTATTAGA-GTTGGtgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacttcgcgatcctttgatgattccctccaaacttcgtcgattgtgagggcttttggaaccgcattccttgcaatcatctgcaatatgtctcactttgtctgcttcattctgactaagaagtggcaaagcatcagcggcatttttaggtcctggcgtgtatactaggactagcttgaacgtaatggctgtagtcgaagcgtacagcgctcaatccttaccggtggcttcgatttcggcgagaaaatatatgtcagcggtttgtggtccgtccagatttcgaattcaagcccataaacgtatatgtgaaatctctcacagccaaagactactcctagtgcccctcgctccgtttgtgaatattgtttctcgacgtcggttagagatctgcttgcgtaggcaacgggtttaaacgatccgtccccctgtttttgtgacattatagctcacagtcctacgggactcgaatcaactataatattatccttgtttcggactttcggttgtaatacaccagtgtttcaaatcttcaaacgcatcctggtgccgtttggtccacttccaaactgcattctttctagtcaattaacgcaaaggtgcagtaatcgttgagaaattctgtatgaaccgcccacaatgattcgccagtcccaggaagcttcgtacttcagcactatttgttgacttgcgtgtttctgacaccgctttgatcttctcgtcgtccggtcgactatcacgtgtacgggaaacacgatcctcgtaaagtcaaatttacatttttcacgattcaaagtaaggcctttcttaaccagtctatcaagtattttggcaaacttttcatcatgatctgcctggtctgttccatagacaacaatgtcatcggagagattccgtactccttcaagaccttggatcacttgacaaatcactcgctgatagatctattagagttgg
gi|4 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgtcggttttatcggttcccgttgcacgtgttgtcaccattgacatgtattcatgccttgacaaataattttcaacttctgtgtgccaatactttttcgcgcagccgttgtttgactattccttgatgtccctcatgtgcaagaaattgtatccttcctcatagattttggcataagtattcgggttccgcgtaatacaataccatcaaaaactgaaaattctgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacTAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTC--TTC---AACTTCTCG--TGTCGAC----ATCGACCTT-GGA-G----TTGC------TTCCCTTGCTA-TGAATTTTT--A-CA-TA-GTC--CT--CAG----ATT------CC--TCTG----CA---TTTCTG-----TCTCC-------AGA-TGT--GTCTT-GTCT-ACCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTTCAAAA-G---CC-ATCGTTCAATTCTC-GCATT-GGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTCTTTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTAG----C-GTAA-CTGATAGCT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAA--ATGTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA----A----CTTCGCTTCTGTTC-----TTC-CCC--CCAAA----CGAATG-T-AGA-GCTCTTCTTTGTCAAGC--GT---CTC---ATTGG-T-CAGCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTAGTTGGCTCATTGGCATC-A--A-GTT---G----CGAT-TTGATTCTCTCAC--TTGT-C-GGTC--CTATTGC-CATTCT--TGACAACACGTGCCCCTTGAA-TGTTATCTT-GTTCATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----ACAACAC-G-C--AGCCGTTCATCATGTT-CTTCTT--GG-CTACGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCACT-TGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAA--C--C-----TTTGTA------------CGTC--------AC-AAAAGTAG----GATTCTCCCTCGATGATTCCTC-T-AA-CTCAATCTGGTGGTAA-CCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCT
gi|5 : ACGATGACTGGACTA-ACCTCATGG--TGTTTGATCATCGACTTTTCGGCTCGATAATGCTTCCTGAGATTTCCAGTTCCCTCAGTGCTAATAAAGGAAATTCGGTATGATTTGGCTTTGCGCTTGAAGGCAAGTTCTACTTGTTCTTTGTCAATA-ATAGATAGGCATTCACTTTAGTAAAGTTCTTTTTCTATATTTTTTTTGCCATATTTCTCATCT-CAAAACACCTTATACAGATAGAAAATTA--TTGAATCAATGCCGTCCAGCCCTACGATTCTGTTTACAAGTATTAATCTCTTCAAGCTTC--AACACCCTAAAGGTCGCCATTGCGGGGTTATTCTTTCGCCC
gi|6 : TCTGCC--ATGT-TCT-CCTTCCCTGGTGCA---TAC---TTTA--------TGGTAAACTTAT-AGGGTTG-GAGAC---AAA-GT-CCCCATCTTTCAATGCGAAGTG-A-TGGAC-GCGTCTTC--TGCC-----AGAT-----AGT----T-T-----CCA-----GC----GGCTTGTGATCTGTAA-TGATAGTGGAAGTGGT-GCAAGCTGCTTAA--ATACAGATCAAAGTG--------CTCACAAGCCCAT-GTTATCGCTAAGGCTTC-TCGCTC-C--GTCT---GACTGTATCTCGACTCA-A----CT-G--------G-GGTAAGGGC----------TCT-----------------GCTTG----C-ATAG-C--ATAGTA-A----GCATGCC-A-----CTCTG-----TCATCGT---C------TT--GAAGCATAAT--GGCTCCCAAA-CCGACTGG--ACTTGCGTCTACTCTAA-T--TGTG---ACTGATTTCTGTGGA-TC-ATGA-T------ATGCTATGA-CATCATCAC---TGCACAG-GCT-GTCCTTCA---ACTTA--AGGAA---------------TGCT-TT------TTCACAC--CTAGAGTCCC-AATG-CCAGG-ATTTGTCTTTGTGAG-T--GAGTTCTCTG-AGAGG-T-TGATAAATGTCAGTATAGTTCTTTATGAAAC--GTGAACTGTA-GTGCGTACTTCCTCAGAATCTCCTAAAGTCTTTA---ACGTTCTGCGGCCTACTGAATTC-CTGG-ATT---G----CG---TTGACCTTTTCGGGGTCG----GGTG--ATAT-GC-CACTGTC-TGAAAACACA-ACACCGAAAAATGAAATCCT-GTTTGTTCTGAATTCACATTTATTACGGTTTACAGT-CAGGCCATGCTCCC--TCAGCCTTTCGAG-----TAC----TCTA---TG-T--AGTGCCTGGTCATG---CTGCTTAAGGTCTGTT-CCGAAAA-TCACAATATCATCGGATATGTTT-GTGGTACC-TGTATATT--CCTG----AATTAGCTGTCGAATAGTTTCGTGGA-AT-ATTTCTGAT-GCTGACG-TATACCGAAGTT--GAGACGCTTGTAAC---A-TAAAT-GCCAAGTGTGTAT-GAATGTAGTTATAAATCT-----G--GAGTTCTGGT-GAG-TCAAGTTGGTGAT--TTCCCTGCGGTAGATCCAGCTTGCTGAACACCTTGCT-CCGTTCAGGTC-CAATATAAGTTCCTCTATAGTAGG--TAGAGTG-TGTT---CG-------GCTGCTTATTGGCCTCC-CTCATATCAACACATAAGCGAATCTTCCTCCG-TT--CTTCTTAGTGGGTCACTA-------TGGGCGATACC-CATGGATTGGCTCACCATCGCC--T----CTCAATGATA--TCCTgcaatctaatgcttagagtgaccctatttcacgtaataactatacacatagacattacccgcggttgtacaatattttaccagtaataaataattttgaaaatatcatagaatcgtattgttgggaaattaattaacccttattagcaaagactcctaattgttgttcatgttggcaccacatagttacgcatttgagcaagtttctagacatcatatatttactgaataggagcattattccaaatgttatcattttatgcaacctgcaagtcgtctccactatctttttgtcaattgatattcactgactgcgaccactgcaagtattgaaatcatactatgatgactctccaatacctgagacgtttccagaatacataaatgactcacaaacacaatgcaacacacattcaagctttgcagaatctaacagtctgacactttcccctcgtttgtcaaatcttccgtttaattttgagttgggtttcgtcaatacaagtgatacaggacacggttcatgaatatatctacttgaccacgaaacttgtctacatgtgaatctgatccttacaggacatgaaaagatccctgcaagtgcctactatgtttcccacagcgaataacacattattttaaaccatatttgtcaatttcacctttgcgtttttgtttcccattccgttgcctgaatgattctgttgtcctggagggggttgtttcttgtatccatgtgttttgcttgaacttcgtcatcgtgctaccagtagtctagacacaaagtttcgtaactgttctattttaaagtcactccctctctctgagctaacttagcgccgtgattctgtgagacctacatcttttcaataatttgatcccgatttgaattcactcttggtttgccgcaagtcacagtcacttgcttgcctgtctcagtcttatcaaaaaactgtgtctactgtttctttgtcggtttgtgtaattttcggaacagctaacgctctaatttgaacattcattgttattctcaatcaaatattttgtcatgcgttttcacagtcactgt
gi|6 : tgatatgtagTGTGC---TA--CACGTTGTACCGATTC---ATCAATATGGA-----TT-TTCACCTG----ACGTTC------------CTTT----CA-TTTTCCTATCCTCGGA---------ACAGTCTGGAAACTCGTTTCAAC-AGTGTCtctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttctgtgctacacgttgtaccgattcatcaatatggattttcacctgacgttcctttcattttcctatcctcggaacagtctggaaactcgtttcaacagtgtc
gi|7 : tgatatgtagtctgccatgttctccttccctggtgcatactttatggtaaacttatagggttggagacaaagtccccatctttcaatgcgaagtgatggacgcgtcttctgccagatagtttccagcggcttgtgatctgtaatgatagtggaagtggtgcaagctgcttaaatacagatcaaagtgctcacaagcccatgttatcgctaaggcttctcgctccgtctgactgtatctcgactcaactggggtaagggctctgcttgcatagcatagtaagcatgccactctgtcatcgtcttgaagcataatggctcccaaaccgactggacttgcgtctactctaattgtgactgatttctgtggatcatgatatgctatgacatcatcactgcacaggctgtccttcaacttaaggaatgctttttcacacctagagtcccaatgccaggatttgtctttgtgagtgagttctctgagaggttgataaatgtcagtatagttctttatgaaacgtgaactgtagtgcgtacttcctcagaatctcctaaagtctttaacgttctgcggcctactgaattcctggattgcgttgaccttttcggggtcgggtgatatgccactgtctgaaaacacaacaccgaaaaatgaaatcctgtttgttctgaattcacatttattacggtttacagtcaggccatgctccctcagcctttcgagtactctatgtagtgcctggtcatgctgcttaaggtctgttccgaaaatcacaatatcatcggatatgtttgtggtacctgtatattcctgaattagctgtcgaatagtttcgtggaatatttctgatgctgacgtataccgaagttgagacgcttgtaacataaatgccaagtgtgtatgaatgtagttataaatctggagttctggtgagtcaagttggtgatttccctgcggtagatccagcttgctgaacaccttgctccgttcaggtccaatataagttcctctatagtaggtagagtgtgttcggctgcttattggcctccctcatatcaacacataagcgaatcttcctccgttcttcttagtgggtcactatgggcgatacccatggattggctcaccatcgcctctcaatgatatccttctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttcGTTTCATTGGCTCAGGTTTACTAGGTT-GAC-CT---ACTA-T-TGACAACCAAAACATACTTTT--------GCAAAAC--TTCTCATACTTCTT-ATCCATCCCTGGCCACCAAACTTTGCTTCTTAATAGCGACTTCATGGCAACAATGCCTGGATGTCCTTCATGTGCAAG--A----TCAAGAACCCTATCA-CGCA-----TTTGTGGTG---GGAAT-AC-ATTCGCGTACCTT------GTAATACTAATTTCCCAATAGAAC--ACAATTCACCC--CT-TATTGGCAA-TACTGTTTGTAC-TCAAT----ACGAT-G---CCA-CTGTTG--ATTGA-CAGACATTGCTA-ACA-GCACAAAGCTCGGGGTCATTCT--CT-GATGTCTC--TCT---TATCTCACG--AGTTGTC----AT-AGCAAT-GGG-GAAGGTTGC------TTCTTCAGCTA-C-AA--CCT--AACA-TA-ATCATCTACCAG----ATCAGAAGACT--TCTG----CA-----------------CT-------AAA-T------CAT-TCCT-AACAAGACGTGAAA-GCGTGTCCGCT--ATAT-TCT-TCGGACC---TGAAATGTACCGAACC---------T--TAAAAGTGT-G-GGTTGCATG-CGCAACA----CCC-ATCGTTCTATTCTA-GCG-C-AGACCTTTGACTT---------TGTAGAATATATACA----T-T-----CTA-----GC----GGTTTGTGGTCAGTGA-GAAG-----------C-TCAAACT-CTACACCGTATATATAAACATG--AAATCTTTCACATGCCCAT-ACGAGGGCTAGCGCCTC-TTTCTC---AGTCTGA-GA----GT--------A-C----CG-A--------C-G-------T----------TCTGTATCACTCAAGCTACGGCTTG----C-ATAAGA-GATAACC-C----GAAATTC-A-----CC--G-----TCTTGTT---C------TT--GCACCAGCAC--GGCGCCTAAT-CCAACAG
gi|8 : tttcgaccaaacagtaactgagacggacaaacaccagtcgtggtgtgtggggtatttcgatacataatcagaaatttgtcaagttcagatttccaatctcgaccttcggcatgagcaattcaaacacgtttcaaaattgacctattttatcgttccacctcgccgttcgcctgcggccataaaaggagtccattctggtgatgaagactattgccgttttctaacataaattctttaaaatttgactcgcaaattgaggaccattatcagtatgaattgaaaacagtagaccatgagtaaaaagaactttgacattaacgccatgatattctcagacgttgtttttgtaaactgccattcaaaatatctactgtaataattaactagtacaaaaatatactctttactcgcaatggacctaaaacgatcagggcaagatgtgccatggcgcagaaggtaattctgtgcACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTT---GTCAATATGTA-----GC-TTCAACTT----AAA------------AGTCTTT----CA-ATTTCCAAT--------------------TCAGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|9 : TTCA---TGATCCTTT---GAGGATTC--CTCGCGAAT-----G--TGTTGA-----A--GGCCTT-TGG-G----TTACATTGCGTTACCTC-CTC-CTAA--CAT--A-CA-GA-ATA--C---CGGCATTATT------CTCTTCTGACATCG---TTTCTGGACTTTCCCCTAGCATTAGAACA---G-TTTCGGCT---CAAGGCGAGACAAGCGCATCAGCGT-GCGTCTCT-AGGTCCT-AGT--AATGTAC---ACTAAACT----T--CAAACATGTCATGGCTG-AAGGCCTAAGCTGT-CC--AGCGTTCGATTCTA-ACG----GGCG-GTTA-TTG--ATTG--TGGATAG-----ATAGTAAT-TATATACCATGTAAGT----GGTATGTGATCTGTC-CAGAT-----------TCTCACACT-TAAG-CCATA-ACGTACATGTGGCAATTCTCTCGCAT--CTAA-ATTACCCACAGTGCTTC-TCTCTC-C--GTCTTGAGA----AT--------ACAGTTTCTCA--------C-A-------T----------TCA-----------------G-TAA----G-ATAG-C-GACAGCT-TAAATGAATTCCGA-----TC--ATGCATCTGTGTT---C------CTTGGGACCAGTACTTAGCACCCAGAACTTACGGGCAACGCGCGTCGACTATGA-C--TC-T---GGT---TCCTT---A-TTATTGG-TTGTA--GTAA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT-TTCA---GC-TCGTTCGAATGCTC----CTCCCTTGCTGTTTG---GTCCATTCATCCAAG----C---T--C-A-C-GTTCTTCTTGG-CAA---------CTCGAAAGCGGACGCAGCTATTGTCGAAA-AATaacaatgctggtccttttccgttcaacacatagaatttccgcttcattccagtatagaaatctgtgttggaatttaccctagcaagcctaatgtgtcagtggcaccatacgcatacagtttcttgacatatttttgtgaatggctttcaaatgtttctttttcaactcgtccactattttttgtcaattatattcactgacgcacccatgtcaatgatgaaatcaacatgatgacctccaatactgacccgagtttccagatacatcaacactaacgcacacacatcatcagattcagaatctaacatctggactttccctcgtttgtcaaatttccgtttatttgatttgggtttcgtcatacaagtgatacaacacttcatgaaatatcctatctgaccacactttctacagttctgatcccttacaggacatgaaagatcccttgcaaagtgcccttgtttcccacagcgataacactttttaacatatttctcattctcacctttgcgtttttgtttcccattgttgccatgaattctgtttcctgacggtgctgtttctgtatccatgtgttttgcttgaacttctgtcatctctacagtagtctagacactatagttcgtaactgttctaattttaagtcctcccctctctcgagtaacttagcccgaattctgtgagacctacacttttcaataatttgatcccgaatttgttcatcttggtttgcgaagtcacagtacactgcttgctgtctcagtcttatcaaaaactgttctactgtttctttgtcggtttgtgtaattttccggaacactaacgctcatatggaacattcattttattctcaaaatatttgttcagcgttttcacagtcactgtatacacggtgtcatcctgtacactctgaacttcatttaacgtgtaataaatgtctt
blockSeqs : G A ACTAGGTT . . ATC A ATGCCTTG T TAA A G A AT T T AG CA A A AAA T CACAC AAC GTGGTG C T TC A . T C TG A . TA T A GTTTG . CA . AT TTT . A . G A GGGG CCTA A C CCTCCAAACTT . TTGTGAG T GAAGG ATTGCG CAACCTAACATAATCATCTACCAGATCAGAAGACT ACATCGTTTCTGGACTTTCCCCTAGCATTAGAACAGTTTCGG GA G A T GGC A C G TGGTGC A CGA AGGACTAGC GG AT C T C AAGGCCTAAGCTGTC CC T A AA GGGCGGTTATTGATTGTGGATAGATAGTAATTATATA TGTAAGT ACT AGTGGAAGTGGT G C CA C G G GCA A CG AG TG A T CGTTTGTGAATATTGTTTCTCGACGTCGGTTAGAGATCT A . . ACT TTAAAT G TCATGCAT G T CCTGTTT TG C T GT TTA C A A A CA A A TAT CGATA GAT TCGGACTTTC . T AT AA T A TCACATTTAT TGCAC C AAC T GTTCGAATGCTCCTCCCT CAGATG ATTCAT GAGTCCCAATGCCAGGAT A A TGAGTTCTCTG C ACG G C CA A T A TG A C A G AGT AAA AGT C A CTGG TCTGACAC AT GGGG TCC GA T GTG C C T TT ATGAA CAG C G G C . T T TCTTAA C GGATTCTGCGGAACACTGTCA CT CTC T AA T ACGA T A CT . GTAT TC A TAGT T AT . C A GTTGAGA ACAATAAATGCCAAGTGTGT T T TTATA A CCCTCGAT G GTG GC AT G T C AT C C CT G T A C A . C T A AATA TC A TT C . C T G TC A . GG TTAGT TC A T T AT T TCGG A CT T T G A AG G TG T TTGAAGG TTT T GATAGGCA C AGTAAAGTTCTTTTTCTATAT TTGC T TCTCAAAACACCTTATAC G GT C GATTCTGTTTACA TCT A GGTC GGT TC
blockSeqs : G A TGGAAAT . . ATA A . T AC . A A AG A T AG AA G A T C CACAC AAC CAGTC A A GG T . T T . C . G . G . . . . T TTT . . . G . C CCTA A C TTCAACTTCT . CATC . G . CTAACATACAGAATACCGGCATTATTCTCT CATTTCTGTCTCCAGATGTGTCTTGT A G . A GT A . G GGTGC A . AAACT . CG . T T TAAGTTTCAAAAG C G A C ATTGGGTCGAGACTTCTTTCCATACAAAACTT AT ACT TC . A GC A C T A A CG C TC T . CGTCTGACTGTATCTCGACTCAACTGGGGTAAGGGCTCT T . . ACT TC . ACGAT A A C . A G AC A T . A A . A A CT GTG . TCGCATCTA . A . TT C G TCACATTTAT ACA C . A TCAAACCCACTT TGG ATTG AACGAATGTAGAGC T T GCGTCTC T TT A C CA C . T . C . G C . AAA ATT C T CGT G CT AC TC . C CA . C A GT TGTT TGT C T G G . T T GCTCCC C CAAGTATTTTGGCAAACT CG TT T . T ACGA . T AT . CAC . A . . T . T A CC ACATAAATGCCAAGTGTGT . A TTATA T CCCTCGAT T GT C AA C . G AT C C CT G T A C A . C T A AATA TC A . . . C T G . A . GG . . A . . . T . A . . . . . . . . . TA . T TT C ACGTTC . . TCCTCGGAAC G . . . . . . . .
blockSeqs : T C TGGAAA . . ATA T . A T . T A TT G C AG C A A A T CACAC GAT CA C T TC A . T C . A . G . G . . . . T TTT . . . G . G CCTA T A TTCAACTTCT . CATC . A . TGAATTTTTACATAGTCCTCAGATTCC CATTTCTGTCTCCAGATGTGTCTTGT A G . T A G . . GGTGC A . A . AT . T C TAGTCGAAGCGTA C T A T CGGTGGCTTCGATTTCGGCGAGAAAATATATG GC CA T . C CA C G G A A AG C TG A . AGTCTGAGAGTACCGACGTTCTGTATCACTCAAGCTACG A . . AGA AC . CTCTG G C C . T A TT T T . T G . A A T GG . TCGCATCTA . T . TT C A CGGCGCTTAC ACA C . A TCAAAACTTCGC TGG ACTT AACGAATGTAGAGC A T TTAACGC A TG A A TC G . C . C . A T . A AGT T A AA G AT AC TC . T CA . A T TT TGTT TGT C T T C . G T GTCTT A CGAGTACTCTATGT CG AT G . T GTT . G CC . CAA . T . . T . C . CC CGTC . A G T G T T C AA C . G GC G . GG . A C A . . G . . . . T . . . A G C . T . . . . A . . . T . A . AA . . GC A AAAAG . . T . . .
blockSeqs : G A TGGAAA . . T A . T T . A C AG A T CA A T T . T AACCC AAC CA A T GG T . T A . A . T . . . . . . . TG . . . C . A CT A C TCTTATCTCA . CAT . G . TGAATTTTTACATAGTCCTCAGATTCC CACTAAATCATTC A . . T A A . . GGCG A . . . CT . G T TAAGTTTCAAAAG C T A C ATTGGGTCGAGACTTCTTTCCATACAAAACTT AT AT T . T AA C G A A A TG T CG G . CGTCTTGAGAATACAGTTTCTCACATTCA T . . GC TC . CCG A A C . A G AC A T . A A . A A T AT . GTGGATCAT . A . CT C G TCGCTGGA GCT C . A TCAAAACTTCGC C ACAC ATCGGTATCCGAA T T GCGTCTC T T A C CA C . T . C . G C . . CTG . T AA G . G . . . CA . . . GA . TGT T T G G . T A GTCTT C GTACACAACACGC GC TT T . . GTT . T AT . CAC . A . . A . T CGTC . T G A G G T G T G . C A . . . . . . .
blockSeqs : C T . . . . C . A T . T . GC T A G C A A . T AACG A CA C T TC A . T C . A . T T T CTCGCGAAT . A . G . TCATCTGCAATATGTCTCACTTTG CTTCATT . . . C C G . . TGA . . . . AG . T T CATGCGCAACAC . T T A GCAGACCTTTGACTTTGTAGAATATATACATT GC AG T . T CA T T A A A G T GG C . GTAGTCGAATAATTGCGTTCT T . . GC AA . CCG A C C . A G TA T T . G T . T A T GG . TATTATT . T . C G . TCACTGCA G . . T AGGAA C CCC AGCTCACGT T T CTCGAA A T G A AT T . C . T . . A . . . . A T . G . G T GTACACAACACGC T . G . . T . G T . C . C . . . . . . . . .
blockSeqs : G T . C TC . . . . GC T . . T . C . T G A A T . . . AGT . . . . CA . . T GAGACAAAGTC . G G A GATGGACGCGTCTTCTGCCAGATAGTTT GC CA C . A G . C C . G T A CC T . GTAGTCGAATAATTGCGTTCT A . . . CC . CCG T G C . C C GC G G . A A . G G C CT . TCG . . . A A . . A . . . CTGG . CCC AACTGCAT G . CGA C T A T TT A .
blockSeqs : G G C . G C GT G A . T G
blockSeqCons : TGGAAA*** *** ATA C* A****** CACAC AAC** ****** ** ** **** TTT CCTA TTCAACTTCT***** ** CAT***** G***** CGAACNTTTACATAGTCCTCAGATTCT********************** CGTTTCTGTCCCCAGATGTCTCGT************************* GGTGC* A******** NAGGCTCGAAAG***** GC********* **** GC** NC***** CCG************ C********* TCGGATCTN** TT GCA** TCGAAACTTCGC********** CG**** AACNAATGTAGAAT******* GCGTCTC******** T** NG**** AT* G*** TC** CA* ** CGT* GTCTT*** CGAGTACGCAACACGT************* ACGA CAC* CGTC******************** G**** G******* T** C* AA*
originalCons : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTC--TTC---AACCTCTCG--TGTCGAC----AT-GGCCTT-GGG-G----TTGC------TTCCCTTGCTA-CGAA--TCT--A-CA-TA-GTC--CT--CAG----ATT------CN--TCTG----CG---TTTCTG-----TCTCC-------AGA-TG---G-CTT-GTCT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGTAAGNCTCAAAA-GT-CCC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAA-C-GATAGCN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTA--ATGNTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA----N----CTTCGTTGCTGTTCG---GTCCACCC--CCAAA----C-AATG-C-AGA-GTTCTTCTTNGTCAA-C--G----CTC---AGCGG-TGCGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTC-C--G-GTT---G----CGAT-TTGATTTTCTCGC--TCGT-C-GGTC--CTATCGC-CGTTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTC-GTTCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCT---G-----TAC----GCAACACTG-T--AGCCTTTCATCATGNT-CTNCCT--GGTCTGCG-CCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAA--C--CAGACGTTTGTAAC---A-TAAATCGTCAAGTGTGTAC-GAATGTAGTTATGAATCTCCCTCGATGANTCCTCGT-AAGCTCAATTTGGTGATAATCCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCTT----AAGTTC---------AGTCTTT----CA-ATTTCCCATCC-CGGA---------ACAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
finalCons : TAATGTTCTCGGTTTNATNGGTTCTGGTTTTGGAAA---GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCC-CTATTCCCGGGTGTCCTTCGTGNGCTAGA------TCGTACACACTGTTTTCGTAAAC--TTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTCTTCAACTTCT-----CG--TGTCGACAT-----GGCCTT-GGGG-----TTGC------TTCCCTTGCTACGAACNTTTACATAGTCCTCAGATTCT----------------------TCTGCGTTTCTGTCCCCAGATGTCTCGT-------------------------CT-ACCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCCGGTGC-AATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGNAGGCTCGAAAG-----CC-ATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCAGC---------GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTNG----C-GTAGC--GATAGCNC-----GAGTTTC-ACCG------------CCGTNCTC---------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGATCTN--GG-TTGTA--ATGTTACNAGCGTTTTCGCGCTTAC-CAAGCA--GTTCTTCA---GCATCTCGAAACTTCGC----------TGCTGTTCG----TCCACCC--CCAAACNAATGTAGAAT-------TCTTCTTNGTCAAGCGTCTC--------AGCGGT--CGGCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTAGTTGGCTCATTGGCNTCNG----GTT---G----CGAT-TTGATTTTCTCG---TCGTC--GGTC--CTATCGCCA-TTCT--TGANAACACGTGCCCCGTAAA-TGTTATCTCGT-TCGTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTGTCTT---TCAATCTCTCGAGTACGCAACACGT-------------AGCCTTTCATCATGNT-CTNCCT--GGTCTACGACCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-TCAC-GAT--CNTG----AATTACTTGTCAAATCACT-CGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAA--C--CAGACGTTTGTACGTC--------------------AC-GAATGTAGG----AATCTG-------GANTCCTCT--AAC-TCAATTTGGTGATAA-CCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCTT----AAGTTC---------AGTCTTT----CA-ATTTCCCATCC-CGGA---------ACAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ATTAATTCTGTTCACTGACGGCGCTTTTTCTGTATCCATGTGCTTTGCATGAACGTCTGTCATTTGTACAGTAGGCGCTATGGTTCGTAACTGTTCTTATGATAAGTCCCTAACTTTCTCGAGTAACTTAGCCCTAACTTAATGAGACCAACAATTTTTCCCCCAATTTTTGCAAAGTCACAGTAAAACTGCTTGCTGTCTCATTCTTGTCTAAAATTGTTCTAAAGTTTCTCTCTCATTTTGAGTAATTTTCAAAATACATATATAATTGCTCATACGGAACATTCACTTTATTCGCAAAATATTTATTCAGTGTTTTCACAATCACTGTGTACACGGTGTTAACCCGTACGCTCTGAACTTCATTTAACGTATTGTAAACGTCT
Unaligned ( gi|13 ): TTTCGATTTGAAGAGTAATTCGGGCTGGACTTTTACCGGTCGTGGCTGGGAGTCGATCGATACGCAAGTAAAAATCTTGGGTTCCACCAGCGTGTATTCTTTTTTCCAGTCTCCCCTCAGCGTTTGGCTGTGCACTTTGAAGTAGAGCTTCAGATAATCGGAGATACAGATTTGGATGCTTTTGATGTCCCACATGGGGCCCTGGCTAGAGGGTGTTGTTTGTATTGTCTACTCCCGTTTATTCTAAGGTATTTTTGGAATTCTTCGGATACGAAACTTGCGGACCGTTATCA
Unaligned ( gi|14 ): AACATCTGAACATTCCCTCGCTTGTCAAATGTCCGTTTAGCTGATTTGGGCTTCGATATGCAACATTAACACTTCATGAAATGTCCTATCTGGTCATAGCTTTCTACAATTCTGATCCATGACTAGACATGAAAGATCCAAAGTGTCCTTATTTCCCACATCGACAACATTTTTACATTCTCACCTTTGCGTTTAGATTCCCCATTGTTTCCATGAC
Unaligned ( gi|16 ): TGTTTGATCCCATTTGTACGAGTAAATCTCTTGAATTCCTCTGAAGTGAACTGAGGTCCGTTGTCGCTGACCATAACACTAGGAACTCCATTCCTTGCAAATATGTTTCTAAGGACTTCAATAGTTTTG
Unaligned ( gi|18 ): ATTCTCACCTTTGCGTTTTTGTTTCCCATTGTTGCCATGAATTCTGTTTACTGACGGTGCTGTTTCTGTATCCATGTGTTTTGCTTGAACTTCTGTCATCTC
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111111 111 111 22222222 22 3333333 11111 222222222 111111 11 11 22222 11 1111 2222 2222 33333333333333 2222 11111 111111 33333 111111111 1111 2222222222 9999999999999999999999999999999999999999999999999999999999999999999999 111 1 111 555555555 4444444444444444444 44444444444444444444444444444444444444444444444444444 22222222222 111 2222222222222 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 222 2222222222222 222222222222222 1111111111 111 111111 111 11111111111111 22222222 22222222222 22222 1 111 1 333333333333333333333 2222 44444444444444444444 3333333333333 111 111 22222222222222 111 111 2222222222 111 1 2222222222 11 1111 11111 111111111 11111111 4444444444444444444444444444 2222222 1111 11 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2222222222 1 1 11 1 1111 11 1 1 11 1 11 22222 11 1111 1 1 1 1 11 1 11 1 1111111 111 22222222 777777777777777777777 2222 1 9999999999999999999 11 1 7777777777777 222 2222 222 11
lowQualScore : 1 1 666666666 6 111 666 1 44444444 1 9999 6 1 3 22 1 2 1 11 4 0 1 0 5555555 1 99999 22222 666666666 4 5 0 11 1 0 666666 5 0 1 55 1 0 11 99 8 3 00000 8 11 7777 0 88 0 777 8 8 8 0 5 8 2222 0 1111 1 1 6 33333333333333 1111 3 1 6 55555 999999 5 77 22222 222222222 4444 3333333333 5555555555555555555555555555555555555555555555555555555555555555555555 6 6 1 555 4 5 7 0 999999 1 0 000 222222222 77 11 5 1 1 1 6666666666666666666 1 2 77 66666666666666666666666666666666666666666666666666666 00000000000 777 8888888888888 5 1 55 6 3 1 888 1 88 66 11 1 5 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 66 5 1 0 000 1111111111111 5 666666666666666 1 1 5555555555 66 1 1 11 111 1 0 5 1 1 77 0 2 1 8888 777777 0 000 11111111111111 1 88888888 1 99 00000000000 55555 1 000 2 999999999999999999999 5 77 9999 888888 22222222222222222222 3 1111111111111 1 444 77 1 11 0 1 5 2 99 1 6 3 0 1 111 88888888888888 99 7 22 666 99 444 9999999999 666 3 6 8888888888 6 99 2 55 55 44 0000 88888 3 000000000 55 22 1 1 5 3 77777777 1 6666666666666666666666666666 1 999 1 99 7 5555555 6 3 77 6 7777 99 1 4444 5 11 0 99 0 8 1 3 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555 1 8888888888 0 77 0 1 8 1 11 0 1 6 22 5 1 4 2 33 0 2 3 9 3333 11 1 33 0 0 0 1 0 1 1 33 4 0 11 55555 33 3 6 6 99 7 4444 7 99 3 3 3 3 88 3 88 3 9999999 0 777 3 55555555 1 444444444444444444444 1111 0 0 2222222222222222222 2 33 0 0 0 3333333333333 333 7 8888 333 88
lowQualScore : . . ......... . ... ... . ........ . .... . . . .. . . . .. . . . . ....... . ..... ..... ......... . . . .. . . ...... . . . .. . . .. .. . . ..... . .. .... . .. . ... . . . . . . .... . .... . . . .............. .... . . . ..... ...... . .. ..... ......... .... .......... ...................................................................... . . . ... . . . . ...... . . ... ......... .. .. . . . . ................... . . .. ..................................................... ........... ... ............. . . .. . . . ... . .. .. .. . . ....................................................................................... .. . . . ... ............. . ............... . . .......... .. . . .. ... . . . . . .. . . . .... ...... . ... .............. . ........ . .. ........... ..... . ... . ..................... . .. .... ...... .................... . ............. . ... .. . .. . . . . .. . . . . . ... .............. .. . .. ... .. ... .......... ... . . .......... . .. . .. .. .. .... ..... . ......... .. .. . . . . ........ . ............................ . ... . .. . ....... . . .. . .... .. . .... . .. . .. . . . . ...................................................................................... . .......... . .. . . . . .. . . . .. . . . . .. . . . . .... .. . .. . . . . . . . .. . . .. ..... .. . . . .. . .... . .. . . . . .. . .. . ....... . ... . ........ . ..................... .... . . ................... . .. . . . ............. ... . .... ... ..
lowQualScore : 0 0 888888888 7 777 000 0 22222222 0 3333 7 0 3 55 0 2 5 00 0 7 0 6 7777777 4 33333 44444 666666666 3 4 4 44 0 6 444444 0 6 7 77 3 8 00 00 0 2 00000 0 00 0000 8 88 8 000 0 0 0 8 0 0 4444 7 4444 0 0 7 55555555555555 2222 7 0 7 88888 222222 2 33 88888 777777777 2222 0000000000 8888888888888888888888888888888888888888888888888888888888888888888888 7 7 0 333 0 7 1 7 777777 4 7 000 777777777 99 77 7 4 4 0 3333333333333333333 3 7 33 66666666666666666666666666666666666666666666666666666 11111111111 333 1111111111111 7 0 99 6 0 0 000 4 33 77 11 0 7 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 00 0 1 0 222 2222222222222 0 111111111111111 1 0 1111111111 99 0 0 44 111 0 2 0 0 1 99 4 7 4 9999 444444 7 000 00000000000000 9 11111111 0 33 00000000000 66666 4 000 4 111111111111111111111 7 99 0000 333333 99999999999999999999 0 3333333333333 7 000 99 7 44 4 0 7 2 22 0 7 7 3 0 777 55555555555555 22 3 00 888 22 222 2222222222 000 3 7 3333333333 3 33 5 88 00 55 0000 11111 0 999999999 66 77 0 6 7 5 77777777 0 0000000000000000000000000000 5 222 0 22 3 2222222 7 7 33 7 8888 22 0 2222 0 00 8 44 8 0 4 2 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555 0 2222222222 6 44 4 0 0 0 55 8 0 5 88 0 2 2 5 22 0 5 2 2 2222 00 0 88 2 0 0 0 2 0 0 88 2 0 22 00000 88 2 7 7 22 3 2222 3 22 3 3 3 3 33 3 33 3 8888888 8 555 2 22222222 0 000000000000000000000 2222 0 2 5555555555555555555 5 88 0 7 7 3333333333333 333 3 3333 333 33
consensus : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCCACTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTCC-TC---AACTTC-CG--TGTCGACAT-GGCCTTGGG-G----TTGC------TTCCCTTGCTACGAACCT--ACATAGTC--CT--CGG----ATT------CN--TCTG----C-----G---TTTC----TG-----TCTCC-AG-A--T-------GT--CTCGT-CT-A-------CCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGNAGG-CT-CAAAAG---C----CATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTC-G-CGT-AGC--GATAG-----CN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TCGG-TTGTAAT-----GNTACGAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA---AC-TTCGC---T-GCT--GTTC-G-TCCACCC--CCAAA---CNAACGT-A---GAATTCTTCTTNGTCAAGCG---TCTC---AGCGG-T-CG--GCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTA---GTTGGCT--CATTGGCGTCN--GGTTG--CGAT-TTG----------ATTTTCTCG-TCGT-C-GG-TC--C----TATCGCCATTNT--TGANAACACGTGCCCCGNA-AA-TGTNATCTC-GNTC---GTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCTCGA--GTAC----GCAACAC----GT--AGCCTTTCATCATGNT-CTNCCT--GGTCTG---CGACCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCA--CTCGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAA--C--CAG-CGTTTGT-------A-----------CGTC--------A-------CGAATGTAGTTATGAAT----CTCCCTCGATGANTCC---T-C-T--AACTCAATTTGGTGATAACCNCTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCTT----AAGTTC---------AGTCTTT----CA-ATTTCCCATCC-CGGA---------ACAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
Reference ( family-2956 ) : TAATGTTCTCGGTTTNATNGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGNTTTC--------ACANA-T--TTCTC-CACNTCTTTGTCCATACCTGGCCACCAAACTTTNTTTCNCAACCGCTGCTTAGTACCC-CTATTCCCGGGTGTCCTTCGTGNGCTAG--A----TCGTACACACTGTTTTCGTAA--ACTTT----CG---GGAATCACTATCCGCGNTCCAC------GTAACACTAAATACCCTACACAAC--AAAATTCATTG--CG-NAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-CGAAT-TTACGA-ACTTGGACAA-GTTCG---TCATCCTTCCTAGANGNTTCT-TC---AACTTCTCG--TGTCGACAT-GGCCTTGGG-G----TTGC------TTCCCTTGCTACGAACNTTTACATAGTC--CT--CAG----ATT------CT--TCTG----C-----G---TTTC----TG-----TCCCC-AG-A--T-------GT--CTCGT-CT-A-------CCAAGACGTGACA-GCGCATCNGCG--ATGT-TCT-ACGTCCC-GGTGCAATGTAC---ACTA--------T--TGAACNTGT-ATGGCCGNAGG-CT-CGAAAG---C----CATCGTTCGATTCTA-GCG-C-GGGCC-GNGACTTC--TTTC--CGTANAA-----ANA----T-T-----CCA-----GC----GGCTTGTGGTCTGTCACNGAT-----------T-TCAAACT-CNANACCATACACGTANATGTG--AAATCTCTCGCACGCCCAN-ACTACCGCTAGNGCTTC-TCTCTC-GTAGTCT---GA----AT--------A-A----CT-G--------C-G-------T----------TCT-----------------GCTN-G-CGT-AGC--GATAG-----CN-C----GAGTTTC-A-----CC--G-----CCGTNCT---C------TT--GNANCAGCAC--GGCNCCCAGA-CCNACGGG--ACTCGCGTCGACCACGA-T--TN-G---GCT---TTCTTCGGA-TC-TNGG-TTGTAAT-----GTTACNAGCGTTTTCGCGCTTAC-CAA-GCA-GTTCTTCA---GCATC--TCGAA---AC-TTCGC---T-GCT--GTTC-G-TCCACCC--CCAAA---CNAATGT-A---GAATTCTTCTTNGTCAAGCG---TCTC---AGCGG-T-CG--GCCACNGTCGANA-AATTCGGTATGAACC--GCGCACTATA-GTTCGCAAGTCCCAGGAAACTCCTCA---CTTCAGAAACGCTA---GTTGGCT--CATTGGCNTCN--GGTTG--CGAT-TTG----------ATTTTCTCG-TCGT-C-GG-TC--C----TATCGCCATTCT--TGANAACACGTGCCCCGTA-AA-TGTTATCTC-GTTC---GTCCTGAACTCGCACTTGTCACGGTTNAGAGT-CAGTCCTTG-TCTT--TCAATCTCTCGA--GTAC----GCAACAC----GT--AGCCTTTCATCATGNT-CTNCCT--GGTCTA---CGACCATGAA-CAACGATGTCATCGGAGATGTTNCGTACTCCC-T-CACGAT--CNTG----AATTACTTGTCAAATCA--CTCGTTGATAT-TTTTCTGGA-GTCGGCGATATACCGAA--C--CAGACGTTTGT-------A-----------CGTC--------A-------CGAATGTAG----GAAT----CT-----G--GANTCC---T-C-T--AACTCAATTTGGTGATAACCACTNCGG-AGGTCNAGTTTATTGAATACCTCNCTCCCATTCACGTCGCATTAGAATTTCGTCTACCGTAGG-ATAGGATG-CGTTTCACGAATAATCGCNGC--ATTCG-CTCG-CTCATATCNACACACAATCNAATNT--CGCCA-TCGGCTTC-----GGG--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTC---GTCAATATGTA-----GC-TTCANCTT----AAGTTC---------AGTCTTT----CA-ATTTCCCATCC-CGGA---------ACAGTCAGGAAATTC--TTGAAT-AATGTCGCCTAGCCGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|1 : TCGGTTTTACTGGTTTTGGCTT----GCAG-GTGTCTGTCAGTAG-ATGACACTGACTACACGCTTTG--------ACAAA-T--ATCTC-TGCCTCCGTGTCCATTCCTGGCCACCATACCTTTTCTCTCAGTCGCTGTTTCGTACGTACAATTCCCTAGTGACCTTCGTGTGCCAG--AGAAATTGTA-----TTTTTTC-TAAGAAGTTT----TG---GCA-TCATAATACGAGTTCCACATACATGTAGCAC--AATGCCATCAACGACTGACAATTC--TGAATG-TAT-CCTGCGCAAC-----TCCGT--GTTTTGAAAATTG-TT--GTCTGT----CTTGATCCCAT-TTATGATGTCTG--TTA-TTTCA---TGATCCTTT---GAGGATTCC-TC---G------CGAATGTCGTGAA-GGCTTTGGGTA----CAGC------GTTCCTTGCAATAAA-------ATA-----CG--CAT----ATT------CA--TCTG----C-----GACGTTTC----TG------------G-AC-T-------TT--CCCGT-TG-AAAGTTGGCCAAGGCGAGACA-GCGCATCAGCG--GCGT-TCTTAGGTCCT-AG---AATGTAC---ACTAAC------T--TAAACATGT-ATGGCTGAAGC-CT----AAGTGTC----CAGCGTTCGATTCTA-ACG----GGC----GGTTTTGATTTT--GGTGAAA-----ATA----T-A-----CCA-----GTAAGTGGTTTGTGATCTGTC-CAGAT-----------C-TCACACT-TAAGCCCATAAACGTACATGTG--GAATCTCTCGCATCTAAAT-ACTACCCCCAGTGCTTC-TCTCTC-C--GTCT---GA----G---------A-A-----T-A--------CAG-------T----------TT-------------------CTC-GACATCAGTAAGATAG-----CGAC----AGGCTTA-AATGATCC--A-----TCATTCTGTTT------TT--GGACCAGTAT--AGCACCCAGA-CCTACGGG--ACTCGCGTCGACTATGA-C--TC-T---GGT---TCCT---GA-TT-TTGGGTTGTAGT-----AA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT--TCA---GC-TCG-TCGAAT--GCGTCCTC---TTGCT--GTTT-GGTCCATCT--CCAG----CTCACGT---------TCTTCTTGGTCAA-------CTCG--AGCGG-CGCA--GCTATTGTCGAAA-AATTTGATATGAACC--GGGCACAGTA-GTTTGCAAGTCCAAGGAAACTCCGCA---CTTCCGAGCTGTTT---GATGGTT--TAC--GCGTCTC-GGTTA--CTACCTTG----------ATTTTCTCT-TCGTCC-GG-CC--G----TATTCCC--TCTGCTGAGATTATGTGTCCGAGA-AA-AACAATTTCTGATA---GACC-GAACTTGCACTTTTCACGGTTAAGCGTAAAACCCTTT-TGCA--TCAATCTATCTA--GTA----------ACTTTGAT--AGTTTTTCATCATGAT-TGGCCT--GGTCGG---CG-CCATACA-CAACAATGTCGTCAGAGAGATTTCGTACTCCCTT-CA-GAC--CCTG----AATCACTTGACCAATGA--CTCTTTGGTAT-ATTTC-GGACGCAGACGAAATTCCGAA--CATCAGCCGTTTAT-------AGCGATATAAACCGTC--------ATGTGTTGTGAATGTTG----TAATTTCCCT-----T--GACTCC---T-CGTCAAGTTCAATTTGGTGAT-ACCCCATCGA-AGGTCTAGTTTCGAAAAGACTTTACTTCCATTCATGTC-CTCTAGTATCTCGTCAACAGTTGGTATCGGATGACGCTTC-CGTCTTACTGCTAT--CTTTG-CGCGACGCATGTCGACACAGATTCGAATTT--CGTCATTTTTCTTC-----GAG--ACTACG-------------ACC-CATGC--TGACGGCTCATCAACTTT----TTCGATGATG--TCTT
gi|10 : ttttccgattgaagagtaattcggctggacttttaccggtcgtggcatgcggagtcgatcgatacgcaagtaaaaatttgggtaattcttttttccagtctcccctcagcgtttgcggctttgatggccttcagtagcgtgcgattttgacttccccgttcccctggggccaatagggtgttgtttgtatgtgtctaactcccgtttattctaaggtattctttgaattcttcggatacgaactgcggaccgttatcacaacgaatgctttgaggaataccgtgtctcacaaacattgcttccatctgtagaattatcctttcactggttatttttttaggatagctacttcttgatatcttgagaagtaatcgacgactaccagaaggttctctcccgagggaaatggtcccgtctcatcaaatcaatagccaaatcttgccacggtccatcgggcattggtg-G--------C-GA------T----------TCT-----------------GGTCCG-CTG-AGT--GATAGGCTTGCA-C----AAGCAAC-A-----AC--T-----TTGCTCT---C------TT--GCGTCAGTAT--AGCCCCTAAG-CCAACAGG--GCTGGCGTCAACCACAACT--TC-GATAGGT---TTGTTCGG--------G-TTGTAATATGAAATTACGA---TAT---CGCTGGA-CAA-G---GTT-TTGA---GTTTT--TCAAACCCAC-TTTCC---T-GCTCAGAT--G-CCCATTG--CCAAT---CG---GT-ATCCGAA--CGT----GTTAGACG---GCGA---AGCGGTT-CG--CTCACAGTGGAAT-AGTCAGGTATTAACCTGGAGCAGTATGCGGTC---ATTCCCAGGAAGCTCCTGA---TTTCA------CT---------CG--CATTGGAGGGA--CGTTGCACGTC-TTGAATAGCGGACATTTTCTCG-GGGTAC-GG-----CGAGATACCAGCTTTAC--TG--AACAC-TATTCCAAAGAA-GGTGAT-TC-GGTCAGAGT--TGAATTCACATTTG-AACGGTTCAGCAT-TAGTCCtatcctctagctcgtctagcttcttgcgcattgctttcctgacgttgaacggtaaacgccttagaggttgagctactggcataacagcgtcatcaaggtgaattttcaggcgaaagtttttcagtttgcct
gi|11 : caattctaagcggaggtttggggcgtttccaaatgccaagtaaaggtttatgatcggtgaccacacggaagtgaggcgcacctctcaggtacatatcaaaatgttcgcaagcccagataatagctaacgcccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngatgtagcTAATGTTGTTGGTTTGATAGGTTCTGGTTT--TGGAAATGCG-CT---GGTAATCTGACATCCATGACATAATTTC--------ACATA-T--TTCTC-CACGTCTTTGTCCATACCTGGCCACCAAACTTTATTTCTCAACTGCTGCGTAGTACCCACTAATCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATCCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTA--CGTAAT-GGTAAATAAT-----TAC-T--AT----AGGATTGATCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-AATTGGACAA-GTTCC---TCATCCTTCCTAGAAGCTat
gi|15 : ataacgactgaaatagtccaccaacaacaacatattgcctgtagtgttaacggccaagcagatctatcgctaaatcttgccgcaatccagttggTATCTC-AGTC---TTCCGGAATTCACACTTGTCACGGTTCAGTTT-CAGTCC-TG---------AATC-CTGGATTCTGC----GGAACACT---GTCAAGCCTGTCATCATGCTCCTTACG--GGTTT------TCCATGAATCAA-GATATCATCAATGATAACCTCTACTCCC-T---CGATTCCATGTAGTAATT--CTGTCA
gi|17 : GTGTGT-------A-----------C-------------------TGAATGTAGTTATAAAT----CT-----G--GAGTTTGGGT-G-A--AGCTCAAGTTGGTGATATCCCCTGCGT-AGATCCAtctt
gi|19 : ttgagacgcttgtaacaataaatgccaaCTGGGTGACCTTCGTGAGCTAA--T----TCCAAAACG-TGTGTTCGCAA-----TT----CAGTCGGAATAACAATTCGGGTCCCTC------GGAGAATTAGTTTTCCAATGCAAC--ACAATT
gi|2 : TAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTCT-TC---AACTTCTCG--TGTCGACATCGACCTTGGA-G----TTGC------TTCCCTTGCTATGAATTTTTACATAGTC--CT--CAG----ATT------CC--TCTG----C-----A---TTTC----TG-----TCTCC-AG-A--T-------GTGTCTTGT-CT-A-------CCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAG-TTTCAAAAG---C----CATCGTTCAATTCTC-GCA-TTGGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTC-TTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTA-G-CGT-AACT-GATAG-----CT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAAAT-----GTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA---AC-TTCGC---T-TCT--GTTC-T-TCC--CC--CCAAA---CGAATGT-A---GAGCTCTTCTTTGTCAAGCG---TCTC---ATTGG-T-CA--GCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTA---GTTGGCT--CATTGGCATCA--AGTTG--CGAT-TTG----------ATTCTCTCACTTGT-C-GG-TC--C----TATTGCCATTCT--TGACAACACGTGCCCCTTG-AA-TGTTATCTT-GTTC---ATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT-----GTAC----ACAACAC----GC--AGCCGTTCATCATGTT-CTTCTT--GG-CTA---CGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCA--CTTGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAA--C--C-----TTTGT-------A-----------CGTC--------A-------CAAAAGTAG----GATT----CTCCCTCGATGATTCC---T-C-T--AACTCAATCTGGTGGTAACCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCATCGACTTT----CTCGATAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTT---GTCAATATGTA-----GC-TTCAACTT----AAA------------AGTCTTT----CA-ATTTCCCA-------------------ATTCAGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|3 : TCGGTTTTATCGGTTCCCGTT----------GCA-CG---TGT----TGTCACCATTGACATGTATTCATGCCTTGACAAA-TAATTTTC-AACTTCTGTGT---------GCCA--ATACTTTTTCGCGCAGCCGTTGTTTGA------CTATTCCTTGATGTCCCTCATGTGCAAGAAA----TTGTAT---CCTTCCTCATAG--ATTTT---------GGCATAAGTATTCGGGTTCCGC------GTAATAC--AATACCATCAAAAACTGAAAATTC
gi|3 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgTTCG---CGATCCTTT---GATGATTCCCTCCA-AACTTC------GTCGAT-T-G----TGAG-G------GC------TT---TTG----GAACC---GCAT--TC--CT--TGC----AAT------CA--TCTG----CAATATG---TCTCACTTTG-----TC----------T-------GC--TTCATTCTGA-------CTAAGAAGTGGCA-AAGCATCAGCGGCAT-T-TTT-AGGTCCT-GGCG---TGTAT---ACTAGGACTAGCT--TGAACGTA--ATGGCTGTAG---T-CGAA-G---CGTA-CAGCGCTCAATCCTT-AC--C-GG-----TGGCTTCGATTTCGGCGAGAAA-----ATA----TATG----TCA-----GC----GGTTTGTGGTCCGTC-CAGAT-----------T-TCGAATT-CAAGCCCATAAACGTATATGTG--AAATCTCTCACA-GCCAAAGACTACTCCTAGTGCCCC-TCGCTCCGT-TTGT---GA----AT--------A------TT-GTTTCTCGAC-G-------TCGGTTAGAGATCT-----------------GCTT-G-CGT-AG-------G-----CAAC----GGGTTTA-A-----AC--GAT---CCGTCCC---CCTGTTTTT--GTGACATTAT--AGCTCACAGT-CCTACGGG--ACTCGAATCAACTATAA-TATTA-T---CCT---TGTTTCGGACTT-TCGG-TTGTAAT-----AC-ACCAGTGTTT-----------CAA-A-----TCTTCAAACGCATC-----------C-T--GG---T-GCC--GTTT-GGTCCACTT--CCAAA---CT----------GCATTCTTTCTAGTCAATTA---ACGC---AAAGG-TGCA--GTAATCGTTGAGA-AATTCTGTATGAACC--GCCCACAATG-ATTCGCCAGTCCCAGGAAGCTTCGTA---CTTCAG---CACTATTTGTTGACTTGCGT--GTTTCT--GACAC--CGCT-TTG----------ATCTTCTCG-TCGT-CCGG-TCGAC----TATCACGTGTAC--GGGAAACACGATCCTCGTA-AA------------------GTC--AAATTTACATTTTTCACGATTCAAAGT-AAGGCCTT--TCTTAACCAGTCTATCAA--GTATTTTGGCAA------------ACTTTTCATCATGAT-CTGCCT--GGTCTG---TT-CCATAGA-CAACAATGTCATCGGAGAGATTCCGTACTCCT-T-CAAGAC--CTTG----GATCACTTGACAAATCA--CTCGCTGATAGATCTATTAGA-GTTGGtgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacttcgcgatcctttgatgattccctccaaacttcgtcgattgtgagggcttttggaaccgcattccttgcaatcatctgcaatatgtctcactttgtctgcttcattctgactaagaagtggcaaagcatcagcggcatttttaggtcctggcgtgtatactaggactagcttgaacgtaatggctgtagtcgaagcgtacagcgctcaatccttaccggtggcttcgatttcggcgagaaaatatatgtcagcggtttgtggtccgtccagatttcgaattcaagcccataaacgtatatgtgaaatctctcacagccaaagactactcctagtgcccctcgctccgtttgtgaatattgtttctcgacgtcggttagagatctgcttgcgtaggcaacgggtttaaacgatccgtccccctgtttttgtgacattatagctcacagtcctacgggactcgaatcaactataatattatccttgtttcggactttcggttgtaatacaccagtgtttcaaatcttcaaacgcatcctggtgccgtttggtccacttccaaactgcattctttctagtcaattaacgcaaaggtgcagtaatcgttgagaaattctgtatgaaccgcccacaatgattcgccagtcccaggaagcttcgtacttcagcactatttgttgacttgcgtgtttctgacaccgctttgatcttctcgtcgtccggtcgactatcacgtgtacgggaaacacgatcctcgtaaagtcaaatttacatttttcacgattcaaagtaaggcctttcttaaccagtctatcaagtattttggcaaacttttcatcatgatctgcctggtctgttccatagacaacaatgtcatcggagagattccgtactccttcaagaccttggatcacttgacaaatcactcgctgatagatctattagagttgg
gi|4 : cttacgattgaagagtagtttctgctggactcttcccgttgttgcatacggggttgaaacgatcacgcaagtaggaaattttgtagcttctttttgccaatttactgctttgatcgctttcagcaaagtgcgattttgtctttcgacctctccgtttccttgcggccaatacggagtcgtacggatgtgtttattccgttattccggagaaattcttgaattcctcggaaacaaactgaggccgttatcactccgcaaggtatgaggtatgccatgtctggcgaaaatgactctaaatgagttgataattctatcgcttgtggttctcttcataatagccacttcttgtatcttgagtagtagtcgaccaccacaggtaaattttcttcggaaacggtcccataggtcaatggctagatatggccatctgccatcaggcatagctgtcggttttatcggttcccgttgcacgtgttgtcaccattgacatgtattcatgccttgacaaataattttcaacttctgtgtgccaatactttttcgcgcagccgttgtttgactattccttgatgtccctcatgtgcaagaaattgtatccttcctcatagattttggcataagtattcgggttccgcgtaatacaataccatcaaaaactgaaaattctgatcctattcgtcggaattcagcattctgaaaattttcaccagactctattctttgcataatgtttcttacTAATGTTCTTGGTTTGATAGGTTCTGGTTT--TGGAAA-GCG-CT---AGTAATATGACACCCATGACATGATTTC--------ACATA-T--TTCTC-CACATCTTTGTCCATACCTGGCCACCAAACTTTAGTTCACAACTGCTGCTTAGTACCC-CTATTCCCAAGTGTCCTTGGTGAGCTAG-------TTGTACACACTGTTTTCGTAA--ACTTT----CA---GGAATCACTATCCTCGATTCAC------GTAACACTAAATATCCTACACAAC--AAAATTCATTG--CG-GAT-GGTAAGTAAT-----TAC-T--AT----AGGATTG-TCCCATCTGTTTTCCTTGA-TGAAT-TTACGA-ACTTGGACAA-GTTC----TCATCCTTCCTAGAAGCTTCT-TC---AACTTCTCG--TGTCGACATCGACCTTGGA-G----TTGC------TTCCCTTGCTATGAATTTTTACATAGTC--CT--CAG----ATT------CC--TCTG----C-----A---TTTC----TG-----TCTCC-AG-ATGT-------GT--CTTGT-CT-A-------CCAA-ACGTGATA-GCGCATCTGCA--ATAT-TCTGACGTTCC-GGTGCAATTTTC---ACT---------T--TGAAATTGT-ATTGTCATAAGTTT-CAAAAG---C----CATCGTTCAATTCTC-GCATT-GGGTC-GAGACTTC--TTTC--CATACAA-----AAC----T-T-----CCA-----AT----GGCTTGTGGTATGTCACTAAT-----------T-TCAAACT-CCACACCATACAGGTAGATGTG--AAACTTCTCACACGCCCAC-ACTACTGCTAGAGCTTCTTTTCTT-GTAGTC----GA----AT--------A-A----TT-G--------C-G-------T----------TCT-----------------GCTA-G-CGT-AACT-GATAG-----CT-C----GAGTTTC-A-----CC--G-----CCATACT---C------TT--GAAGTAACAC--TGCTCCAAGA-CCAACATT--ACTTGCATCAGTCACAA-T--TG-G---GCT---TTCTTCGCA-TC-TAAC-TTGAAAT-----GTTACCAACGTTTTCACATTTAT-CAA-ACA-GTTCTTTA---GCATC--TCAAA---AC-TTCGC---T-TCT--GTTC-T-TC--CCC--CCAAA---CGAATGT-A---GAGCTCTTCTTTGTCAAGCG---TCTC---ATTGG-T-CA--GCCACAGTTGCCA-GATTTGGAATGTATC--TCGCACTAAA-GTTTACAAGTCCCAGAAAACTTTTCA---CTTCAGAAACACTA---GTTGGCT--CATTGGCATCA--AGTTG--CGAT-TTG----------ATTCTCTCACTTGT-C-GG-TC--C----TATTGCCATTCT--TGACAACACGTGCCCCTTG-AA-TGTTATCTT-GTTC---ATCCTGAACTCGTACTTGCTACGATTGAGAGT-CAGTCCTTG-TCTT--TCAATCTCT-----GTAC----ACAACAC----GC--AGCCGTTCATCATGTT-CTTCTT--GG-CTA---CGACCATGAA-CAACGATGTCATCTGAAATGTTATGTATTCCC-T-CACAAT--CATG----AAATACTTGTGAAATCA--CTTGTTGATAT-TTTTCTGGA-GTCGGCGATATACCAAA--C--C-----TTTGT-------A-----------CGTC--------A-------CAAAAGTAG----GATT----CTCCCTCGATGATTCC---T-C-T--AACTCAATCTGGTGGTAACCACTCCTG-AGGTCGAGTTTATTGAATATCTCCCTCCCATTTACTTTGTATTAGAATTTCATCTACCATAGG-ATAGGATG-CCTTTCACGAATAATCGCAGC--ATTCG-CTTG-CTCATATCCACACACAATCTAATGT--CACCA-TCGGCTTC-----GGA--ACTACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCT
gi|5 : ACGATGACTGGACTA-ACCTCATGG--TGTTTGATCATCGACTTTTCGGCTCGATAATGCTTCCTGAGATTTCCAGTTCCCTCAGTGCTAATAAAGGAAATTCGGTATGATTTGGCTTTGCGCTTGAAGGCAAGTTCTACTTGTTCTTTGTCAATA-ATAGATAGGCATTCACTTTAGTAAAGTTCTTTTTCTATATTTTTTTTGCCATATTTCTCATCT-CAAAACACCTTATACAGATAGAAAATTA--TTGAATCAATGCCGTCCAGCCCTACGATTCTGTTTACAAGTATTAATCTCTTCAAGCTTC--AACACCCTAAAGGTCGCCATTGCGGGGTTATTCTTTCGCCC
gi|6 : TCTGCC--ATGT-TCT-CCTTCCCTGGTGCA---TAC---TTTA--------TGGTAAACTTAT-AGGGTTGGAGA-C----AAAGTCCC----CATCTTTCAATGCGAAGTG-A-TGGAC-GCGTCTTC--TGCC-----AGAT-----AGT----T-T-----CCA-----GC----GGCTTGTGATCTGTAA-TGATAGTGGAAGTGGT-GCAAGCTGCTTAA--ATACAGATCAAAGTG--------CTCACAAGCCCAT-GTTATCGCTAAGGCTTC-TCGCTC-C--GTCT---GACTGTATCTCGACTCA-A----CT-G--------G-GGTAAGGGC----------TCT-----------------GCTT-G-CAT-AGC---ATAG-----TA-A----GCATGCC-A-----CTCTG-----TCATCGT---C------TT--GAAGCATAAT--GGCTCCCAAA-CCGACTGG--ACTTGCGTCTACTCTAA-T--TGTG---ACTGATTTCTGTGGA-TC-ATGA-T----AT-----GCTATGA-CATCATCAC---TGCACAG-GCT-GTCCTTCA---ACTTA--AGGAA--------------T-GCT---TT----TTCACAC--CTAGAGTCCCAATGCCA---GGATTTGTCTTTGT-GAGTGAGTTCTCTG-AGAGG-T-TG--ATAAATGTCAGTATAGTTCTTTATGAAAC--GTGAACTGTA-GTGCGTACTTCCTCAGAATCTCCTAAAGTCTTTA---ACGTTC---TGCGGCC--TACTGAATTCCTGGATTG--CG---TTG----------ACCTTTTCG-GGGT-C-GGGTG--A----TAT-GCCACTGTC-TGAAAACACA-ACACCGAA-AAATGAAATCCT-GTTT---GTTCTGAATTCACATTTATTACGGTTTACAGT-CAGGCCATGCTCCC--TCAGCCTTTCGA--GTAC----TC--TAT----GT--AGTGCCTGGTCATG---CTGCTTAAGGTCTGTTCCGA----AAA-TCACAATATCATCGGATATGTTT-GTGGTACC-TGTATATT--CCTG----AATTAGCTGTCGAAT-AGTTTCGTGGA-AT-ATTTCTGAT-GCTGACG-TATACCGAAGTT--GAGACGCTTGTAACATAAA-----------TGCCAAGTGTGTA-------TGAATGTAGTTATAAAT----CT-----G--GAGTTC---TGG-T--GAGTCAAGTTGGTGATTTCC-CTGCGGTAGATCCAGCTTGCTGAACACCTTGCT-CCGTTCAGGTC-CAATATAAGTTCCTCTATAGTAGG--TAGAGTG-TGTT---CG-------GCTGCTTATTGGCCTCC-CTCATATCAACACATAAGCGAATCTTCCTCCG-TT--CTTCTTAGTGGGTCACTA-------TGGGCGATACC-CATGGATTGGCTCACCATCGCC--T----CTCAATGATA--TCCTgcaatctaatgcttagagtgaccctatttcacgtaataactatacacatagacattacccgcggttgtacaatattttaccagtaataaataattttgaaaatatcatagaatcgtattgttgggaaattaattaacccttattagcaaagactcctaattgttgttcatgttggcaccacatagttacgcatttgagcaagtttctagacatcatatatttactgaataggagcattattccaaatgttatcattttatgcaacctgcaagtcgtctccactatctttttgtcaattgatattcactgactgcgaccactgcaagtattgaaatcatactatgatgactctccaatacctgagacgtttccagaatacataaatgactcacaaacacaatgcaacacacattcaagctttgcagaatctaacagtctgacactttcccctcgtttgtcaaatcttccgtttaattttgagttgggtttcgtcaatacaagtgatacaggacacggttcatgaatatatctacttgaccacgaaacttgtctacatgtgaatctgatccttacaggacatgaaaagatccctgcaagtgcctactatgtttcccacagcgaataacacattattttaaaccatatttgtcaatttcacctttgcgtttttgtttcccattccgttgcctgaatgattctgttgtcctggagggggttgtttcttgtatccatgtgttttgcttgaacttcgtcatcgtgctaccagtagtctagacacaaagtttcgtaactgttctattttaaagtcactccctctctctgagctaacttagcgccgtgattctgtgagacctacatcttttcaataatttgatcccgatttgaattcactcttggtttgccgcaagtcacagtcacttgcttgcctgtctcagtcttatcaaaaaactgtgtctactgtttctttgtcggtttgtgtaattttcggaacagctaacgctctaatttgaacattcattgttattctcaatcaaatattttgtcatgcgttttcacagtcactgt
gi|6 : tgatatgtagTGTGC---TA--CACGTTGTACCGATTC---ATCAATATGGA-----TT-TTCACCTG----ACGTTC------------CTTT----CA-TTTTCCTATCCTCGGA---------ACAGTCTGGAAACTCGTTTCAAC-AGTGTCtctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttctgtgctacacgttgtaccgattcatcaatatggattttcacctgacgttcctttcattttcctatcctcggaacagtctggaaactcgtttcaacagtgtc
gi|7 : tgatatgtagtctgccatgttctccttccctggtgcatactttatggtaaacttatagggttggagacaaagtccccatctttcaatgcgaagtgatggacgcgtcttctgccagatagtttccagcggcttgtgatctgtaatgatagtggaagtggtgcaagctgcttaaatacagatcaaagtgctcacaagcccatgttatcgctaaggcttctcgctccgtctgactgtatctcgactcaactggggtaagggctctgcttgcatagcatagtaagcatgccactctgtcatcgtcttgaagcataatggctcccaaaccgactggacttgcgtctactctaattgtgactgatttctgtggatcatgatatgctatgacatcatcactgcacaggctgtccttcaacttaaggaatgctttttcacacctagagtcccaatgccaggatttgtctttgtgagtgagttctctgagaggttgataaatgtcagtatagttctttatgaaacgtgaactgtagtgcgtacttcctcagaatctcctaaagtctttaacgttctgcggcctactgaattcctggattgcgttgaccttttcggggtcgggtgatatgccactgtctgaaaacacaacaccgaaaaatgaaatcctgtttgttctgaattcacatttattacggtttacagtcaggccatgctccctcagcctttcgagtactctatgtagtgcctggtcatgctgcttaaggtctgttccgaaaatcacaatatcatcggatatgtttgtggtacctgtatattcctgaattagctgtcgaatagtttcgtggaatatttctgatgctgacgtataccgaagttgagacgcttgtaacataaatgccaagtgtgtatgaatgtagttataaatctggagttctggtgagtcaagttggtgatttccctgcggtagatccagcttgctgaacaccttgctccgttcaggtccaatataagttcctctatagtaggtagagtgtgttcggctgcttattggcctccctcatatcaacacataagcgaatcttcctccgttcttcttagtgggtcactatgggcgatacccatggattggctcaccatcgcctctcaatgatatccttctctactagactctgcaactccttctccaccttgttcctcaagtgaaatagagtctcccttggtttcGTTTCATTGGCTCAGGTTTACTAGGTT-GAC-CT---ACTA-T-TGACAACCAAAACATACTTTT--------GCAAAAC--TTCTCATACTTCTT-ATCCATCCCTGGCCACCAAACTTTGCTTCTTAATAGCGACTTCATGGCAACAATGCCTGGATGTCCTTCATGTGCAAG--A----TCAAGAACCCTATCA-CGCA-----TTTGTGGTG---GGAAT-AC-ATTCGCGTACCTT------GTAATACTAATTTCCCAATAGAAC--ACAATTCACCC--CT-TATTGGCAA-TACTGTTTGTAC-TCAAT----ACGAT-G---CCA-CTGTTG--ATTGA-CAGACATTGCTA-ACA-GCACAAAGCTCGGGGTCATTCT--CT-GATGTCTCT-CT---TATCTCACG--AGTTGTCAT-AGCAATGGG-GAAGGTTGC------TTCTTCAGCTAC-AACCTA-ACATAATCATCTACCAG----ATCAGAAGACT--TCTG----C-----A---------------------CT-AA-A--T-------CA--TTC---CT-A-------ACAAGACGTGAAA-GCGTGTCCGCT--ATAT-TCT-TCGGACC---TGAAATGTACCGAACC---------T--TAAAAGTGT-G-GGTTGCATG-CG-CAACAC---C----CATCGTTCTATTCTA-GCG-C-AGACCTTTGACTT---------TGTAGAATATATACA----T-T-----CTA-----GC----GGTTTGTGGTCAGTGA-GAAG-----------C-TCAAACT-CTACACCGTATATATAAACATG--AAATCTTTCACATGCCCAT-ACGAGGGCTAGCGCCTC-TTTCTC---AGTCTGA-GA----GT--------A-C----CG-A--------C-G-------T----------TCTGTATCACTCAAGCTACGGCTT-G-CATAAGA--GATAA-----CC-C----GAAATTC-A-----CC--G-----TCTTGTT---C------TT--GCACCAGCAC--GGCGCCTAAT-CCAACAG
gi|8 : tttcgaccaaacagtaactgagacggacaaacaccagtcgtggtgtgtggggtatttcgatacataatcagaaatttgtcaagttcagatttccaatctcgaccttcggcatgagcaattcaaacacgtttcaaaattgacctattttatcgttccacctcgccgttcgcctgcggccataaaaggagtccattctggtgatgaagactattgccgttttctaacataaattctttaaaatttgactcgcaaattgaggaccattatcagtatgaattgaaaacagtagaccatgagtaaaaagaactttgacattaacgccatgatattctcagacgttgtttttgtaaactgccattcaaaatatctactgtaataattaactagtacaaaaatatactctttactcgcaatggacctaaaacgatcagggcaagatgtgccatggcgcagaaggtaattctgtgcACGATGACTGGACTA-ACC-CATGG--TGTTTGATCA-CGACTTT----CTCG-TAATG--TCCTGAGA-TTCCAG-TCCCTCA-TGCT-ATAA--GGAATTCGGTAC-ATC--GC-TTGCGC---AA--CAAGTTTCACTTGTTT---GTCAATATGTA-----GC-TTCAACTT----AAA------------AGTCTTT----CA-ATTTCCAAT--------------------TCAGGAAATTC--TTGAAT-AATGTCACCTAGCTGTAC-------------AGTATTAA---CTCCAAGCTTCAAAACACCCTAAA----GCCATTGCGG---TAT--CTTCGCCC
gi|9 : TTCA---TGATCCTTT---GAGGATTCC-TCGCGAAT-----G--TGTTGA-A--GGCCTTTGG-G----TTACATTGCGTTACCTC-CTCCTAACAT--ACAGAATA--C---CGGCATTATT------CTCTTCTGACATC-----G---TTTC----TGGACTTTCCCCTAGCA--TTAGAACAGT--TTCGG-CT----------CAAGGCGAGACAAGCGCATCAGCGT-GCGTCTCT-AGGTCCT-AGT--AATGTAC---ACTAAACT----T--CAAACATGTCATGGCTGAAGG-CC-T--AAG---CTGTCCAGCGTTCGATTCTA-ACG----GGCG-GTTA-TTG--ATTG--TGGATAG-----ATAGTAAT-TATATACCATGTAAGT----GGTATGTGATCTGTC-CAGAT-----------TCTCACACT-TAAG-CCATA-ACGTACATGTGGCAATTCTCTCGCAT--CTAA-ATTACCCACAGTGCTTC-TCTCTC-C--GTCTTGAGA----AT--------ACAGTTTCTCA--------C-A-------T----------TCA-----------------G-TA-A-GAT-AGC--GACAG-----CT-TAAATGAATTCCGA-----TC--ATGCATCTGTGTT---C------CTTGGGACCAGTACTTAGCACCCAGAACTTACGGGCAACGCGCGTCGACTATGA-C--TC-T---GGT---TCCTT---A-TTATTGG-TTGTAGT-----AA-ACAAGTGTTTCGGCGCTTAC-TAATGCACGTT-TTCA---GC-TCGTTCGAAT--GC-TCCTCCCTT-GCT--GTTTGG-TCCATTCATCCAAG---CTCACG---------TTCTTCTTGG-CAA-------CTCGAAAGCGG-A-CGCAGCTATTGTCGAAA-AATaacaatgctggtccttttccgttcaacacatagaatttccgcttcattccagtatagaaatctgtgttggaatttaccctagcaagcctaatgtgtcagtggcaccatacgcatacagtttcttgacatatttttgtgaatggctttcaaatgtttctttttcaactcgtccactattttttgtcaattatattcactgacgcacccatgtcaatgatgaaatcaacatgatgacctccaatactgacccgagtttccagatacatcaacactaacgcacacacatcatcagattcagaatctaacatctggactttccctcgtttgtcaaatttccgtttatttgatttgggtttcgtcatacaagtgatacaacacttcatgaaatatcctatctgaccacactttctacagttctgatcccttacaggacatgaaagatcccttgcaaagtgcccttgtttcccacagcgataacactttttaacatatttctcattctcacctttgcgtttttgtttcccattgttgccatgaattctgtttcctgacggtgctgtttctgtatccatgtgttttgcttgaacttctgtcatctctacagtagtctagacactatagttcgtaactgttctaattttaagtcctcccctctctcgagtaacttagcccgaattctgtgagacctacacttttcaataatttgatcccgaatttgttcatcttggtttgcgaagtcacagtacactgcttgctgtctcagtcttatcaaaaactgttctactgtttctttgtcggtttgtgtaattttccggaacactaacgctcatatggaacattcattttattctcaaaatatttgttcagcgttttcacagtcactgtatacacggtgtcatcctgtacactctgaacttcatttaacgtgtaataaatgtctt
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ATTAATTCTGTTCACTGACGGCGCTTTTTCTGTATCCATGTGCTTTGCATGAACGTCTGTCATTTGTACAGTAGGCGCTATGGTTCGTAACTGTTCTTATGATAAGTCCCTAACTTTCTCGAGTAACTTAGCCCTAACTTAATGAGACCAACAATTTTTCCCCCAATTTTTGCAAAGTCACAGTAAAACTGCTTGCTGTCTCATTCTTGTCTAAAATTGTTCTAAAGTTTCTCTCTCATTTTGAGTAATTTTCAAAATACATATATAATTGCTCATACGGAACATTCACTTTATTCGCAAAATATTTATTCAGTGTTTTCACAATCACTGTGTACACGGTGTTAACCCGTACGCTCTGAACTTCATTTAACGTATTGTAAACGTCT
Unaligned ( gi|13 ): TTTCGATTTGAAGAGTAATTCGGGCTGGACTTTTACCGGTCGTGGCTGGGAGTCGATCGATACGCAAGTAAAAATCTTGGGTTCCACCAGCGTGTATTCTTTTTTCCAGTCTCCCCTCAGCGTTTGGCTGTGCACTTTGAAGTAGAGCTTCAGATAATCGGAGATACAGATTTGGATGCTTTTGATGTCCCACATGGGGCCCTGGCTAGAGGGTGTTGTTTGTATTGTCTACTCCCGTTTATTCTAAGGTATTTTTGGAATTCTTCGGATACGAAACTTGCGGACCGTTATCA
Unaligned ( gi|14 ): AACATCTGAACATTCCCTCGCTTGTCAAATGTCCGTTTAGCTGATTTGGGCTTCGATATGCAACATTAACACTTCATGAAATGTCCTATCTGGTCATAGCTTTCTACAATTCTGATCCATGACTAGACATGAAAGATCCAAAGTGTCCTTATTTCCCACATCGACAACATTTTTACATTCTCACCTTTGCGTTTAGATTCCCCATTGTTTCCATGAC
Unaligned ( gi|16 ): TGTTTGATCCCATTTGTACGAGTAAATCTCTTGAATTCCTCTGAAGTGAACTGAGGTCCGTTGTCGCTGACCATAACACTAGGAACTCCATTCCTTGCAAATATGTTTCTAAGGACTTCAATAGTTTTG
Unaligned ( gi|18 ): ATTCTCACCTTTGCGTTTTTGTTTCCCATTGTTGCCATGAATTCTGTTTACTGACGGTGCTGTTTCTGTATCCATGTGTTTTGCTTGAACTTCTGTCATCTC