lowQualScore : 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 11 222 333333333 22 444444444444444 11 44444444444444444444444444444444444 1 111111111 2222222222 4444 2222222 1 11 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1 11 77777
lowQualScore : 55 6 555 4 7 777777777 33 777777777777777 11 99 77777777777777777777777777777777777 3 7777 5 7 4 44 99 44 3 6 888888888 8 2 1111111111 4444 0 7777777 2 77 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 5 22 66666
lowQualScore : .. . ... . . ......... .. ............... .. .. ................................... . .... . . . .. .. .. . . ......... . . .......... .... . ....... . .. .......................................................................................................................... . .. .....
lowQualScore : 77 7 222 0 0 555555555 88 222222222222222 00 22 11111111111111111111111111111111111 6 1111 2 7 1 66 55 66 3 1 999999999 2 0 9999999999 0000 7 3333333 3 55 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 00 00000
consensus : TTCTTGTTAACGATGTA-ANTNATCGATA--------TTTGTCGTGTTT-----TT--TGGTAGTGT--GTAGT--GT--TAT----ATTTGTTTATNTAATAT--G--ATA-A-TGT----CTCTTGATAAAGACGCGGGTTGCGTCGAAAAT--TTGA-G--G-TTTAAATAACCAACAGTGTCG--TGGCCTTTT----------CAGTGCT--TCTATATACGAAGTGTACATTCNTCATACGTTACCTGTACAATGTATCAATACAGGGATTTTCTATANACCGTATTACNTTNTGNACCACATGTCCATTGTATTGGGTTAATGAGCNGCAANTNNATGAATTANAAANANACGGATCAGAGCGAATGAGGATACGCC--CTATCGTCCAA
Reference ( gi|1 ) : TTCTTTCTAAGGATGTA-ACTAATTGATA--------TTTGTCGGGTTT-----TT--TAGCATTGT--GTAGT--GT--TTT----ATTTGTTTCTTTAATAT--G--ATA-A-TGT----CTCTTGATAAAAACGCAGGTTGCGTCGAAAAT--TTGG-G--G-TTAAAATAACCAACAATGTTG--TGACCTTTT----------CAGTGCT--CCTATACACCAAGTATATATTTTTCA-AGATGGCCTATCCCATAT-TCAGGACAA-------C--TACACTAAATTACACTCTATATCACATGTTTATTGTTTTGGGTT--T--GCT---AATCAATG--TT-T---TATACGGATC-GAGTGAATTAGGACGCGCCTTCT-TCGTCCAAGTGGCTTTTTTTCACGATGCGCGACCAGTAGTAAGTAAAGTATGTAAATCA
gi|5 : TTCTTGTTAAGGATGTAGAATAAT-GATA--------TTTGTCCTGTTT-----TG--TAG---TGT--GTAAT--GT--TAT----ATATGTTGATGTAGTAT---------A-TAT----CTCTTGATAAAGACGCGGACTGCGTCGAAAAA--TTAG-G--T-TT-AAATAATCAACTGTGTCG--TGGTCTTTT----------CAGTGCTA-TATATATATGAAGT-TA-ATTCATCA-ACAT
gi|10 : ctagtaatcaatgtatcaTTCTTGTTAACAATACATATTTATTAACT--------TTTGTTGTCTCT-----TTCTTAA---TGT--GTAGT--AT--TAT----AT----------AGTAT---------A-TGT----ATCTTGATAAAGACACAGGTTGCGTCGAAAa
gi|2 : ttagtatatcaattatcatTCTTGCTTACGATATA-GTTAATTGATGATTGCCTTTTTATTGTGTTTAGTGTTT--TGATAGTGT--GTAGT--GT--TTTCGTAGTATGTTCGTTGGATAT--GCAACACG-TGT----CTCTTGATAAAGACGCGGGTTGCGGCGAAAAT--TTGA-G--G-TTTAAATAA---------------------TT----------CAGTGCTG-TCTATATAC--ATTGTACATTCCTCATACGTTACCTGTACAATGTATCAATACAGGGATTTTCTATACACTG---TACCTTTTGTACCAC-T-TCCATTAT----GGTT--TGAGCG---ATTAAATGAATT-TAAATAAACAAATCAGAGTGAA
gi|8 : cTGTA-AGTTATCAATA--------TTTGTCG--TTT-----TT--T--CGTTGTTTGTAGTTTGT--TAT----ATTCATTCATGCAATAT---------A-TGT----CTCTTGATGAAAACGCGGATTGTGTGGACAAT--TTGA-G--G-TTTAGATAACCGACACTGTC---TAGTCCTTT----------CGGTG
gi|14 : TTT-----TT--TGGTAGTGT--GTAGT--AT--TTG----AT--ATTTCGTTA---T--G---TA-A-T----------------AGACACGGGTTGCGTAGAAAAT--TTGA-G--G-TTAAAATAACCAACt
gi|12 : TAGT--GTGACAT----GTTTGTTTACATGATATTGA--ATA-AATAT----CTCTTGATAAAGATGC-GGTTGCACTGAAATT--TTGA-G--A-TT--TATAACCAACAGAATCA--TGGTCTTTC----------TAGTGCT--g
gi|15 : tca----ATTTGTTTATATAATAT------TA-A-TAT----CTCTTGATTAAAACGCCGTTTGAATTGGAAAT--GTGT-G--G-TTTGAATAATCAA
gi|20 : ATAT--G--ATA-A-TATGTATCTCTTGATAAAGACACAGGTTGTGTC
gi|9 : ctttcgtaagt-A-TGT----CTCTTGATAAAGATTCGGGTTGTGT--AAAAA--CTGA-GAAG-TTTAAAT-ACCAACAGTGCCA--TGGCTTTTTTTTTTTTTTGCAGTGCT------TACAAAATGTATATATa
gi|18 : -A-TGT----CT-TTGATAAAGACGCGGGTTGCGTTGAAAAT----------------AACAATCAGC---GTCG--TGGCC-TTC----------CGGTGCatatatataatcttttaacatgt
gi|16 : at-TGT----CTCTTGGT-TCGACGCGGGTTGCATCAAAAAC--CTGA-A--GCTTAAAGT
gi|6 : tatgGT----CTCCTGATAAGAACATGGGTTGCGTCGGAATT--TCAA-G--G-TT-TGATAACCAATGGTGTtagtctagattcagtgctgtc
gi|17 : acaatgtgtaattggtcgtaatttcgtagtgtgctttctgtaaatgacaaacatggatcatgtaatgtagTCTTGACAAA----------GCGTCGAAAAT--TTGA-G--G-CTTAAATAACCATTAGTGTTGTTTGCCATTCT----------CAGTGaagtgcgagatatataaaatcattgta
gi|19 : tgGCGT-AAAAATAATTGACG--G-TTAGA-TAACCAACAGTGCCG--TGGCCTTTT----------CAGTGCTTATCTAT
gi|13 : ACAA-------C--TAAACCGTATTACATTATAAATCACATG------GTATTGAGTTAAT--GCTGCAAATCTATG--TTAA---AATA-GG--C-GAACGAATGAGGATACGCC--CTATCGTCCAA
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|3 ): AATATTCACATGTTTGTAGTTGCATATATCTTCTTATTTTTACTCTCATCATGATCGTTTTGAAGTTTCTCTATTTTTTGTACTCCTATTATTAACTGTTCTCTTCCTGACCCGTTGATGGCACCGGTTCTCCACACCATCGTCCGTAGACACTCTTGTGACGAACAGGATGAATACTCTTGCTTACATTAATTTCCGTTTTTTCAGTGTGTTTGATGTTCATGTATATGTAATATGTGTCTCTAGACGCGGGTTGCGTCG
Unaligned ( gi|4 ): ATGATTCTGCGTTTAAAGACTGAAGTATTAACCAACTTTGTGTATAAAATTTTCAATCATTTGAAATCTTCACACATTTCAAATCGCTCTCTTCTTATTTCACTATCATCTTGTCGTTTCCTTAAATTCTTCCTTTAATTTTGCAATTTTTTTTAAAATATCGCTCTTCCCGACTCGTTGTTGGCACGGACTCTCTTCGTTATCATCTGTAGACACGCTTGTGACGAAATACGATATATCTTGGGTTTTATTCTCGGTTT
Unaligned ( gi|7 ): AATTACCAACCAACTTCTTTAATCTTTTCACTTTAAATCACAATCCTGCCCTATATTTATACCATCATCTGTTGTTTGCGAAGTTCTCTCTTTAATTTTCGCCATGTTTATATTTCTTCTCCGACCGTTAATGGCACGGACAC
Unaligned ( gi|11 ): CTTTCCTCTTCTGTTGGTGGCACAGACTCTCTACACCATCATCTACAGACACTCTTGTGACGAACCGGCTGACAAAAGAGAAGCTGGGCATATTTTCTTTGTCAAGTCAGTGGGATA
Alignments
lowQualScore : 1 22222222 11111 11 22222222222 444444 1111111111 222 1 1 1 1 4444444444 1 2222 1 66666666666666666666666666666 222 22 1
lowQualScore : 2 3 1 1 6 44444444 6 0 66 22222 55 1 66 77777777777 666 4 777 2 777777 2 6666 2 44 44 66 55 9999999999 666 2 0 6 0 1 5 2 3 3 3 5 3 1111111111 1 0 6 1 1 11 0 7 1111 6 99999999999999999999999999999 1 0 111 0 2 77 5
lowQualScore : . . . . . ........ . . .. ..... .. . .. ........... ... . ... . ...... . .... . .. .. .. .. .......... ... . . . . . . . . . . . . .......... . . . . . .. . . .... . ............................. . . ... . . .. .
lowQualScore : 5 3 0 0 3 22222222 7 7 99 55555 22 4 11 11111111111 666 0 000 4 000000 9 1111 4 22 22 33 22 4444444444 333 8 2 5 5 0 5 5 0 0 0 5 0 0000000000 0 7 0 0 0 77 7 3 3333 0 77777777777777777777777777777 0 7 000 7 5 55 5
consensus : TTCTTGCTAACGATGTA-ANTNATCGATA--------TTT-GTCGTGT--TT-----TTTGGTAGTGTGTAGT--GT--T--------ATATT--TGT-T---TATGTAATAT--G---A-TGT----CTCTTGATAAAGACGCGGGTTGCGTCGAAAAT--TTGAG--GTTTAAATAACCAACAGTGTCG-TGGCC-TTTT----------CAGTGCT--TCTATATACGAAGTGTATATTCNTCATACGTNGCCTGTNCNATGTATCAGNACAGGGATTTTCTATACACCG-ATTACATTNTATATCACATGTCCATTGT-TTGGGTT--TG--CTGC-AATCAATG--TT--AAATANACGAATC-GAGCGAATNAGGACGCGCCTTCTATCGTCCAA
Reference ( family-2724 ) : TTCTTGTTAACGATGTA-ANTNATCGATA--------TTT-GTCGTGT--TT-----TTTGGTAGTGTGTAGT--GT--T--------ATATT--TGT-T---TATNTAATAT--GATAA-TGT----CTCTTGATAAAGACGCGGGTTGCGTCGAAAAT--TTGAG--GTTTAAATAACCAACAGTGTCG-TGGCC-TTTT----------CAGTGCT--TCTATATACGAAGTGTACATTCNTCATACGTTACCTGTACAATGTATCAATACAGGGATTTTCTATANACCGTATTACNTTNTGNACCACATGTCCATTGTATTGGGTTAATGAGCNGCAANTNNATGAATTANAAANANACGGATCAGAGCGAATGAGGATACGCC--CTATCGTCCAA
gi|1 : TTCTTTCTAAGGATGTA-ACTAATTGATA--------TTT-GTCGGGT--TT-----TTTAGCATTGTGTAGT--GT--T--------TTATT--TGT-T---TCTTTAATAT--GATAA-TGT----CTCTTGATAAAAACGCAGGTTGCGTCGAAAAT--TTGGG--GTTAAAATAACCAACAATGTTG-TGACC-TTTT----------CAGTGCT--CCTATACACCAAGTATATATTTTTCA-AGATGGCCTATCCCATAT-TCAGGACAA-------C--TACACTAAATTACACTCTATATCACATGTTTATTGTTTTGGGTT-------TGCTAATCAATGTTTT------ATACGGATC-GAGTGAATTAGGACGCGCCTTCT-TCGTCCAA
gi|10 : TTCTTGTTAACAATACATATTTATTAACT--------TTT-GTTGTCT--CT-----TTCT-TAATGTGTAGT--AT--T--------ATAT----------------AGTAT------A-TGT----ATCTTGATAAAGACACAGGTTGCGTCGAAAgtggctttttttcacgatgcgcgaccagtagtaagtaaagtatgtaaatca
gi|12 : ttagtatatcaattatcatTAGT--GTGAC--------ATGTT--TGT-T---TACATGATATTGAATAAATAT----CTCTTGATAAAGATGCGG-TTGCACTGAAATT--TTGAG--ATTTA--TAACCAACAGAATCA-TGGTC-TTTC----------TAGTGCT--
gi|13 : tcaTAAACCGTATTACATTATAAATCACATG------GTATTGAGTTAATG--CTGCAAATCTATG--TTA-AAATAGGCGAA------CGAATGAGGATACGCC--CTATCGTCCAA
gi|14 : acaacT--TT-----TTTGGTAGTGTGTAGT--AT--TTG------ATATT--TCG-T---TATGTAATA---------------------------GACACGGGTTGCGTAGAAAAT--TTGAG--GTTAAAATAACCAACttag
gi|15 : ATT--TGT-T---TATATAATAT----TAA-TAT----CTCTTGATTAAAACGCCGTTTGAATTGGAAAT--GTGTG--GTTTGAATAATCAAg
gi|16 : -TGT----CTCTTGGTTC-GACGCGGGTTGCATCAAAAAC--CTGAA--GCTTAAA
gi|17 : tatgTCTTGACAAAG----------CGTCGAAAAT--TTGAG--GCTTAAATAACCATTAGTGTTGTTTGCCATTCT----------CAGTGgttagtctagattcagtgctgtc
gi|18 : tgA-TGT----CT-TTGATAAAGACGCGGGTTGCGTTGA-----------------AAATAACAATCAGCGTCG-TGGCC--TTC----------CGGTGC
gi|19 : atGCGT-AAAAATAATTGAC--GGTTAGATAACCAACAGTGCCG-TGGCC-TTTT----------CAGTGCTTATCTAT
gi|2 : TCTTGCTTACGATATA-GTTAATTGATGATTGCCTTTTT-ATTGTGT--TTAGTGTTTTGATAGTGTGTAGT--GT--TTTCGTAGTATGTT--CGT-TGGATATGCAACAC--G-----TGT----CTCTTGATAAAGACGCGGGTTGCGGCGAAAAT--TTGAG--GTTTAAATAA---------------------TT----------CAGTGCTG-TCTATATAC--ATTGTACATTCCTCATACGTTACCTGTACAATGTATCAATACAGGGATTTTCTATACACTG---TACCTTTTGTACCAC-T-TCCATTAT----GGTT--TGAGCG---ATTAAATGAATT-TAAATAAACAAATCAGAGTGAA
gi|20 : cATAT--GATAA-TATGTATCTCTTGATAAAGACACAGGTTGTGTC
gi|3 : ctttcgtaagtGT--TT-----TTT--CAGTGTGT------T--TG-------ATGTTCATGT-A---TATGTAATAT--G-----TGT----CTCT------AGACGCGGGTTGCGTCGa
gi|5 : aatattcacatgtttgtagttgcatatatcttcttatttttactctcatcatgatcgttttgaagtttctctattttttgtactcctattattaactgttctcttcctgacccgttgatggcaccggttctccacaccatcgtccgtagacactcttgtgacgaacaggatgaatactcttgcttacattaatttccTTCTTGTTAAGGATGTAGAATAAT-GATA--------TTT-GTCCTGT--TT-----T---GTAGTGTGTAAT--GT--T--------ATATA--TGT-T---GATGTAGTAT------A-TAT----CTCTTGATAAAGACGCGGACTGCGTCGAAAAA--TT-AG--GTTTAAATAATCAACTGTGTCG-TGGTC-TTTT----------CAGTGCTA-TATATATATGAAGT-TA-ATTCATCA
gi|6 : ctagtaatcaatgtatcaTGTA-ATTGGTCGTAA--------TTTCGTAGTGTGCTT-----TCTG-TA------AAT--GA--C--------AAACA--TGGAT---CATGTAATGT------A-GGT----CTCCTGATAAGAACATGGGTTGCGTCGGAATT--TCAAG--GTTT-GATAACCAATGGTGTacata
gi|8 : acaatgTGTA-AGTTATCAATA--------TTT-GTCGT----TT-----TTTCGTTGTTTGTAGTTTGT--T--------ATATT--CAT-T---CATGCAATAT------A-TGT----CTCTTGATGAAAACGCGGATTGTGTGGACAAT--TTGAG--GTTTAGATAACCGACACTGTC--TAGTC-CTTT----------CGGTGaagtgcgagatatataaaatcattgta
gi|9 : A-TGT----CTCTTGATAAAGATTCGGGTTGTGT--AAAAA--CTGAGAAGTTTAAAT-ACCAACAGTGCCA-TGGCT-TTTTTTTTTTTTTGCAGTGCT--------TACAAAATGTATATt
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|4 ): ATGATTCTGCGTTTAAAGACTGAAGTATTAACCAACTTTGTGTATAAAATTTTCAATCATTTGAAATCTTCACACATTTCAAATCGCTCTCTTCTTATTTCACTATCATCTTGTCGTTTCCTTAAATTCTTCCTTTAATTTTGCAATTTTTTTTAAAATATCGCTCTTCCCGACTCGTTGTTGGCACGGACTCTCTTCGTTATCATCTGTAGACACGCTTGTGACGAAATACGATATATCTTGGGTTTTATTCTCGGTTT
Unaligned ( gi|7 ): AATTACCAACCAACTTCTTTAATCTTTTCACTTTAAATCACAATCCTGCCCTATATTTATACCATCATCTGTTGTTTGCGAAGTTCTCTCTTTAATTTTCGCCATGTTTATATTTCTTCTCCGACCGTTAATGGCACGGACAC
Unaligned ( gi|11 ): CTTTCCTCTTCTGTTGGTGGCACAGACTCTCTACACCATCATCTACAGACACTCTTGTGACGAACCGGCTGACAAAAGAGAAGCTGGGCATATTTTCTTTGTCAAGTCAGTGGGATA
Alignments
lowQualScore : 1 22222222 11111 11 22222222222 33333333 1111111111 222 1 1 1 4444444444 33333 333333333333 11 2222 1 2222222 111 11 1
lowQualScore : 2 3 1 1 6 44444444 6 0 66 22222 55 1 66 77777777777 666 77777 3 11111111 555 2 44 44 66 55 9999999999 666 2 0 6 7 1 5 2 1 1 1 5 1 1111111111 00000 1 7 888888888888 88 5555 3 6666666 1 999 0 1 88 5
lowQualScore : . . . . . ........ . . .. ..... .. . .. ........... ... ..... . ........ ... . .. .. .. .. .......... ... . . . . . . . . . . . . .......... ..... . . ............ .. .... . ....... . ... . . .. .
lowQualScore : 5 3 0 0 3 22222222 7 7 99 55555 22 4 11 11111111111 666 99999 6 00000000 000 4 22 22 33 22 4444444444 333 8 2 5 0 0 5 5 0 0 0 5 0 0000000000 00000 0 3 777777777777 33 7777 3 0000000 0 000 7 0 55 5
consensus : TTCTTGCTAACGATGTA-ANTNATCGATA--------TTT-GTCGTGT--TT-----TTTGGTAGTGTGTAGT--GT--T--------ATATT--TGT-T---TATG-TAATAT------GAT---GTCTCTTGATAAAGACGCGGGTTGCGTCGAAAAT--TTGAG--GTTTAAATAACCAACAGTGTCG-TGGCC-TTTT----------CAGTGCT--TCTATATACGAAGTGTATATTCNTCATACGTNGCCTGTNCNATGTATCAGNACAGGGATTTTCTATACACC-G-ATTACATTNTATATCACATGTCCATTG-T-TTGGGTT--TGCTGC-AATC-AATG---TT-AAATANACGAATC-GAGCGAATNAGGACGCGCCTTCTATCGTCCAA
Reference ( family-2724 ) : TTCTTGCTAACGATGTA-ANTNATCGATA--------TTT-GTCGTGT--TT-----TTTGGTAGTGTGTAGT--GT--T--------ATATT--TGT-T---TATG-TAATAT------GAT---GTCTCTTGATAAAGACGCGGGTTGCGTCGAAAAT--TTGAG--GTTTAAATAACCAACAGTGTCG-TGGCC-TTTT----------CAGTGCT--TCTATATACGAAGTGTATATTCNTCATACGTNGCCTGTNCNATGTATCAGNACAGGGATTTTCTATACACC-G-ATTACATTNTATATCACATGTCCATTG-T-TTGGGTT--TGCTGC-AATC-AATG---TT-AAATANACGAATC-GAGCGAATNAGGACGCGCCTTCTATCGTCCAA
gi|1 : TTCTTTCTAAGGATGTA-ACTAATTGATA--------TTT-GTCGGGT--TT-----TTTAGCATTGTGTAGT--GT--T--------TTATT--TGT-T---TCTT-TAATAT------GATAATGTCTCTTGATAAAAACGCAGGTTGCGTCGAAAAT--TTGGG--GTTAAAATAACCAACAATGTTG-TGACC-TTTT----------CAGTGCT--CCTATACACCAAGTATATATTTTTCA-AGATGGCCTATCCCATAT-TCAGGACAA-------C--TACACTAA-ATTACACTCTATATCACATGTTTATTGTT-TTGGGTT--TGCT---AATC-AATG---TT---TTATACGGATC-GAGTGAATTAGGACGCGCCTTCT-TCGTCCAA
gi|10 : TTCTTGTTAACAATACATATTTATTAACT--------TTT-GTTGTCT--CT-----TTCT-TAATGTGTAGT--AT--T--------ATAT-----------------AGTAT-------AT---GTATCTTGATAAAGACACAGGTTGCGTCGAAAgtggctttttttcacgatgcgcgaccagtagtaagtaaagtatgtaaatca
gi|12 : ttagtatatcaattatcatTAGT--GTGAC--------ATGTT--TGT-T---TACA-TGATATTGAATAAAT---ATCTCTTGATAAAGATGCGG-TTGCACTGAAATT--TTGAG--ATTTA--TAACCAACAGAATCA-TGGTC-TTTC----------TAGTGCT--
gi|13 : tcaTAAACC-GTATTACATTATAAATCACATG------G-TATTGAGTTAATGCTGCAAATC-TATG---TTAAAATAGGCGAA------CGAATGAGGATACGCC--CTATCGTCCAA
gi|14 : acaacT--TT-----TTTGGTAGTGTGTAGT--AT--TTG------ATATT--TCG-T---TATG-TAATA--------------------------GACACGGGTTGCGTAGAAAAT--TTGAG--GTTAAAATAACCAACttag
gi|15 : ATT--TGT-T---TATA-TAATATT-----AAT---ATCTCTTGATTAAAACGCCGTTTGAATTGGAAAT--GTGTG--GTTTGAATAATCAAg
gi|16 : TAT------G-T---GTCTCTTGGTTC-GACGCGGGTTGCATCAAAAAC--CTGAA--GCTTAAA
gi|17 : TCTTGACAAAG----------CGTCGAAAAT--TTGAG--GCTTAAATAACCATTAGTGTTGTTTGCCATTCT----------CAGTGgttagtctagattcagtgctgtc
gi|18 : tgAT---GTCT-TTGATAAAGACGCGGGTTGCGTTGA-----------------AAATAACAATCAGCGTCG-TGGCC--TTC----------CGGTGC
gi|19 : atGCGT-AAAAATAATTGAC--GGTTAGATAACCAACAGTGCCG-TGGCC-TTTT----------CAGTGCTTATCTAT
gi|2 : TCTTGCTTACGATATA-GTTAATTGATGATTGCCTTTTT-ATTGTGT--TTAGTGTTTTGATAGTGTGTAGT--GT--TTTCGTAGTATGTT--CGT-TGGATATG-CAACAC------G-T---GTCTCTTGATAAAGACGCGGGTTGCGGCGAAAAT--TTGAG--GTTTAAATAA---------------------TT----------CAGTGCTG-TCTATATAC--ATTGTACATTCCTCATACGTTACCTGTACAATGTATCAATACAGGGATTTTCTATACACT-G---TACCTTTTGTACCAC-T-TCCATTA-T----GGTT--TGA-GC-GATTAAATGAATTT-AAATAAACAAATCAGAGTGAA
gi|20 : cGT-A---TATGATAATAT------G-T---ATCTCTTGATAAAGACACAGGTTGTGTC
gi|3 : ctttcgtaaGT--TT-----TTT--CAGTGTGT------T--TG-------ATGTTCATGT-A---TATG-TAATAT------G-T---GTCTCT------AGACGCGGGTTGCGTCGa
gi|5 : aatattcacatgtttgtagttgcatatatcttcttatttttactctcatcatgatcgttttgaagtttctctattttttgtactcctattattaactgttctcttcctgacccgttgatggcaccggttctccacaccatcgtccgtagacactcttgtgacgaacaggatgaatactcttgcttacattaatttccTTCTTGTTAAGGATGTAGAATAAT-GATA--------TTT-GTCCTGT--TT-----T---GTAGTGTGTAAT--GT--T--------ATATA--TGT-T---GATG-TAGTAT-------AT---ATCTCTTGATAAAGACGCGGACTGCGTCGAAAAA--TT-AG--GTTTAAATAATCAACTGTGTCG-TGGTC-TTTT----------CAGTGCTA-TATATATATGAAGT-TA-ATTCATCA
gi|6 : ctagtaatcaatgtatcaTGTA-ATTGGTCGTAA--------TTTCGTAGTGTGCTT-----TCTG-TA------AAT--GA--C--------AAACA--TGGAT---CATG-TAATGT-------AG---GTCTCCTGATAAGAACATGGGTTGCGTCGGAATT--TCAAG--GTTT-GATAACCAATGGTGTacata
gi|8 : acaatgTGTA-AGTTATCAATA--------TTT-GTCGT----TT-----TTTCGTTGTTTGTAGTTTGT--T--------ATATT--CAT-T---CATG-CAATAT-------AT---GTCTCTTGATGAAAACGCGGATTGTGTGGACAAT--TTGAG--GTTTAGATAACCGACACTGTC--TAGTC-CTTT----------CGGTGaagtgcgagatatataaaatcattgta
gi|9 : AT---GTCTCTTGATAAAGATTCGGGTTGTGT--AAAAA--CTGAGAAGTTTAAAT-ACCAACAGTGCCA-TGGCT-TTTTTTTTTTTTTGCAGTGCT--------TACAAAATGTATATt
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|4 ): ATGATTCTGCGTTTAAAGACTGAAGTATTAACCAACTTTGTGTATAAAATTTTCAATCATTTGAAATCTTCACACATTTCAAATCGCTCTCTTCTTATTTCACTATCATCTTGTCGTTTCCTTAAATTCTTCCTTTAATTTTGCAATTTTTTTTAAAATATCGCTCTTCCCGACTCGTTGTTGGCACGGACTCTCTTCGTTATCATCTGTAGACACGCTTGTGACGAAATACGATATATCTTGGGTTTTATTCTCGGTTT
Unaligned ( gi|7 ): AATTACCAACCAACTTCTTTAATCTTTTCACTTTAAATCACAATCCTGCCCTATATTTATACCATCATCTGTTGTTTGCGAAGTTCTCTCTTTAATTTTCGCCATGTTTATATTTCTTCTCCGACCGTTAATGGCACGGACAC
Unaligned ( gi|11 ): CTTTCCTCTTCTGTTGGTGGCACAGACTCTCTACACCATCATCTACAGACACTCTTGTGACGAACCGGCTGACAAAAGAGAAGCTGGGCATATTTTCTTTGTCAAGTCAGTGGGATA
Alignments
lowQualScore : 1 22222222 11111 11 22222222222 33333333 1111111111 222 1 1 1 4444444444 33333 333333333333 11 2222 1 2222222 111 11 1
lowQualScore : 2 3 1 1 6 44444444 6 0 66 22222 55 1 66 77777777777 666 77777 3 11111111 555 2 44 44 66 55 9999999999 666 2 0 6 7 1 5 2 1 1 1 5 1 1111111111 00000 1 7 888888888888 88 5555 3 6666666 1 999 0 1 88 5
lowQualScore : . . . . . ........ . . .. ..... .. . .. ........... ... ..... . ........ ... . .. .. .. .. .......... ... . . . . . . . . . . . . .......... ..... . . ............ .. .... . ....... . ... . . .. .
lowQualScore : 5 3 0 0 3 22222222 7 7 99 55555 22 4 11 11111111111 666 99999 6 00000000 000 4 22 22 33 22 4444444444 333 8 2 5 0 0 5 5 0 0 0 5 0 0000000000 00000 0 3 777777777777 33 7777 3 0000000 0 000 7 0 55 5
consensus : TTCTTGCTAACGATGTA-ANTNATCGATA--------TTT-GTCGTGT--TT-----TTTGGTAGTGTGTAGT--GT--T--------ATATT--TGT-T---TATG-TAATAT------GAT---GTCTCTTGATAAAGACGCGGGTTGCGTCGAAAAT--TTGAG--GTTTAAATAACCAACAGTGTCG-TGGCC-TTTT----------CAGTGCT--TCTATATACGAAGTGTATATTCNTCATACGTNGCCTGTNCNATGTATCAGNACAGGGATTTTCTATACACC-G-ATTACATTNTATATCACATGTCCATTG-T-TTGGGTT--TGCTGC-AATC-AATG---TT-AAATANACGAATC-GAGCGAATNAGGACGCGCCTTCTATCGTCCAA
Reference ( family-2724 ) : TTCTTGCTAACGATGTA-ANTNATCGATA--------TTT-GTCGTGT--TT-----TTTGGTAGTGTGTAGT--GT--T--------ATATT--TGT-T---TATG-TAATAT------GAT---GTCTCTTGATAAAGACGCGGGTTGCGTCGAAAAT--TTGAG--GTTTAAATAACCAACAGTGTCG-TGGCC-TTTT----------CAGTGCT--TCTATATACGAAGTGTATATTCNTCATACGTNGCCTGTNCNATGTATCAGNACAGGGATTTTCTATACACC-G-ATTACATTNTATATCACATGTCCATTG-T-TTGGGTT--TGCTGC-AATC-AATG---TT-AAATANACGAATC-GAGCGAATNAGGACGCGCCTTCTATCGTCCAA
gi|1 : TTCTTTCTAAGGATGTA-ACTAATTGATA--------TTT-GTCGGGT--TT-----TTTAGCATTGTGTAGT--GT--T--------TTATT--TGT-T---TCTT-TAATAT------GATAATGTCTCTTGATAAAAACGCAGGTTGCGTCGAAAAT--TTGGG--GTTAAAATAACCAACAATGTTG-TGACC-TTTT----------CAGTGCT--CCTATACACCAAGTATATATTTTTCA-AGATGGCCTATCCCATAT-TCAGGACAA-------C--TACACTAA-ATTACACTCTATATCACATGTTTATTGTT-TTGGGTT--TGCT---AATC-AATG---TT---TTATACGGATC-GAGTGAATTAGGACGCGCCTTCT-TCGTCCAA
gi|10 : TTCTTGTTAACAATACATATTTATTAACT--------TTT-GTTGTCT--CT-----TTCT-TAATGTGTAGT--AT--T--------ATAT-----------------AGTAT-------AT---GTATCTTGATAAAGACACAGGTTGCGTCGAAAgtggctttttttcacgatgcgcgaccagtagtaagtaaagtatgtaaatca
gi|12 : ttagtatatcaattatcatTAGT--GTGAC--------ATGTT--TGT-T---TACA-TGATATTGAATAAAT---ATCTCTTGATAAAGATGCGG-TTGCACTGAAATT--TTGAG--ATTTA--TAACCAACAGAATCA-TGGTC-TTTC----------TAGTGCT--
gi|13 : tcaTAAACC-GTATTACATTATAAATCACATG------G-TATTGAGTTAATGCTGCAAATC-TATG---TTAAAATAGGCGAA------CGAATGAGGATACGCC--CTATCGTCCAA
gi|14 : acaacT--TT-----TTTGGTAGTGTGTAGT--AT--TTG------ATATT--TCG-T---TATG-TAATA--------------------------GACACGGGTTGCGTAGAAAAT--TTGAG--GTTAAAATAACCAACttag
gi|15 : ATT--TGT-T---TATA-TAATATT-----AAT---ATCTCTTGATTAAAACGCCGTTTGAATTGGAAAT--GTGTG--GTTTGAATAATCAAg
gi|16 : TAT------G-T---GTCTCTTGGTTC-GACGCGGGTTGCATCAAAAAC--CTGAA--GCTTAAA
gi|17 : TCTTGACAAAG----------CGTCGAAAAT--TTGAG--GCTTAAATAACCATTAGTGTTGTTTGCCATTCT----------CAGTGgttagtctagattcagtgctgtc
gi|18 : tgAT---GTCT-TTGATAAAGACGCGGGTTGCGTTGA-----------------AAATAACAATCAGCGTCG-TGGCC--TTC----------CGGTGC
gi|19 : atGCGT-AAAAATAATTGAC--GGTTAGATAACCAACAGTGCCG-TGGCC-TTTT----------CAGTGCTTATCTAT
gi|2 : TCTTGCTTACGATATA-GTTAATTGATGATTGCCTTTTT-ATTGTGT--TTAGTGTTTTGATAGTGTGTAGT--GT--TTTCGTAGTATGTT--CGT-TGGATATG-CAACAC------G-T---GTCTCTTGATAAAGACGCGGGTTGCGGCGAAAAT--TTGAG--GTTTAAATAA---------------------TT----------CAGTGCTG-TCTATATAC--ATTGTACATTCCTCATACGTTACCTGTACAATGTATCAATACAGGGATTTTCTATACACT-G---TACCTTTTGTACCAC-T-TCCATTA-T----GGTT--TGA-GC-GATTAAATGAATTT-AAATAAACAAATCAGAGTGAA
gi|20 : cGT-A---TATGATAATAT------G-T---ATCTCTTGATAAAGACACAGGTTGTGTC
gi|3 : ctttcgtaaGT--TT-----TTT--CAGTGTGT------T--TG-------ATGTTCATGT-A---TATG-TAATAT------G-T---GTCTCT------AGACGCGGGTTGCGTCGa
gi|5 : aatattcacatgtttgtagttgcatatatcttcttatttttactctcatcatgatcgttttgaagtttctctattttttgtactcctattattaactgttctcttcctgacccgttgatggcaccggttctccacaccatcgtccgtagacactcttgtgacgaacaggatgaatactcttgcttacattaatttccTTCTTGTTAAGGATGTAGAATAAT-GATA--------TTT-GTCCTGT--TT-----T---GTAGTGTGTAAT--GT--T--------ATATA--TGT-T---GATG-TAGTAT-------AT---ATCTCTTGATAAAGACGCGGACTGCGTCGAAAAA--TT-AG--GTTTAAATAATCAACTGTGTCG-TGGTC-TTTT----------CAGTGCTA-TATATATATGAAGT-TA-ATTCATCA
gi|6 : ctagtaatcaatgtatcaTGTA-ATTGGTCGTAA--------TTTCGTAGTGTGCTT-----TCTG-TA------AAT--GA--C--------AAACA--TGGAT---CATG-TAATGT-------AG---GTCTCCTGATAAGAACATGGGTTGCGTCGGAATT--TCAAG--GTTT-GATAACCAATGGTGTacata
gi|8 : acaatgTGTA-AGTTATCAATA--------TTT-GTCGT----TT-----TTTCGTTGTTTGTAGTTTGT--T--------ATATT--CAT-T---CATG-CAATAT-------AT---GTCTCTTGATGAAAACGCGGATTGTGTGGACAAT--TTGAG--GTTTAGATAACCGACACTGTC--TAGTC-CTTT----------CGGTGaagtgcgagatatataaaatcattgta
gi|9 : AT---GTCTCTTGATAAAGATTCGGGTTGTGT--AAAAA--CTGAGAAGTTTAAAT-ACCAACAGTGCCA-TGGCT-TTTTTTTTTTTTTGCAGTGCT--------TACAAAATGTATATt
blockSeqs : C T T T T ATTGCCTT C GC AGTGT GG A TT TTTCGTAGT TCA TGGA A TGAATAAA . C AA AA GT AT TTTTTTTTTG TAT G G C C T C T A A A T GGATTTTCTA CGTA A A TCCATTAT AA TGCA A AATTTA G TCA G . A
blockSeqs : C G T A T . . . . GA G . GAC T AT . TAA . T . . A T . GT A G T A TG T . GGTAT . GC . TTAA A .
blockSeqs : G . A A C . . . . CG G . TTG T T . A . A . . G T . AT . . .
blockSeqs : . T G C . . . . T G . TG T T . G . T . . G T . .
blockSeqs : . G T . . . . . G G . T T T . G . C . . G C .
blockSeqs : . . G G . T A A . G . C . . A T .
blockSeqs : . . . . . C A A . G . T . . . . .
blockSeqs : . T T T . A . C . . . . .
blockSeqs : . T . A . C . .
blockSeqs : . . A . C . .
blockSeqs : . . C . .
blockSeqs : . C . .
blockSeqs : . G
blockSeqs : .
blockSeqs : .
blockSeqCons : G******* *** GT*
originalCons : TTCTTGCTAACGATGTA-ANTNATCGATA--------TTT-GTCGTGT--TT-----TTTGGTAGTGTGTAGT--GT--T--------ATATT--TGT-T---TATG-TAATAT------GAT---GTCTCTTGATAAAGACGCGGGTTGCGTCGAAAAT--TTGAG--GTTTAAATAACCAACAGTGTCG-TGGCC-TTTT----------CAGTGCT--TCTATATACGAAGTGTATATTCNTCATACGTNGCCTGTNCNATGTATCAGNACAGGGATTTTCTATACACC-G-ATTACATTNTATATCACATGTCCATTG-T-TTGGGTT--TGCTGC-AATC-AATG---TT-AAATANACGAATC-GAGCGAATNAGGACGCGCCTTCTATCGTCCAA
finalCons : TTCTTGCTAACGATGTA-ANTNATCGATA--------TTT-GTCGTGT--TT-----TTTGGTAGTGTGTAGT--GT--T--------ATATT--TGT-T---TATG-TAATATG-------T---GTCTCTTGATAAAGACGCGGGTTGCGTCGAAAAT--TTGAG--GTTTAAATAACCAACAGTGTCG-TGGCC-TTTT----------CAGTGCTGT-CTATATACGAAGTGTATATTCNTCATACGTNGCCTGTNCNATGTATCAGNACAGGGATTTTCTATACACC-G-ATTACATTNTATATCACATGTCCATTG-T-TTGGGTT--TGCTGC-AATC-AATG---TT-AAATANACGAATC-GAGCGAATNAGGACGCGCCTTCTATCGTCCAA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|4 ): ATGATTCTGCGTTTAAAGACTGAAGTATTAACCAACTTTGTGTATAAAATTTTCAATCATTTGAAATCTTCACACATTTCAAATCGCTCTCTTCTTATTTCACTATCATCTTGTCGTTTCCTTAAATTCTTCCTTTAATTTTGCAATTTTTTTTAAAATATCGCTCTTCCCGACTCGTTGTTGGCACGGACTCTCTTCGTTATCATCTGTAGACACGCTTGTGACGAAATACGATATATCTTGGGTTTTATTCTCGGTTT
Unaligned ( gi|7 ): AATTACCAACCAACTTCTTTAATCTTTTCACTTTAAATCACAATCCTGCCCTATATTTATACCATCATCTGTTGTTTGCGAAGTTCTCTCTTTAATTTTCGCCATGTTTATATTTCTTCTCCGACCGTTAATGGCACGGACAC
Unaligned ( gi|11 ): CTTTCCTCTTCTGTTGGTGGCACAGACTCTCTACACCATCATCTACAGACACTCTTGTGACGAACCGGCTGACAAAAGAGAAGCTGGGCATATTTTCTTTGTCAAGTCAGTGGGATA
Alignments
lowQualScore : 1 22222222 11111 11 22222222222 222222222222 1111111111 1 1 1 1 4444444444 33333 333333333333 11 2222 1 2222222 111 11 1
lowQualScore : 2 3 1 1 6 44444444 6 2 66 22222 55 1 66 77777777777 666 77777 3 000000000000 2 44 44 77 9999 7777777777 5 2 2 0 6 7 1 5 2 1 1 1 5 1 1111111111 00000 1 7 888888888888 88 5555 3 6666666 1 999 0 1 88 5
lowQualScore : . . . . . ........ . . .. ..... .. . .. ........... ... ..... . ............ . .. .. .. .... .......... . . . . . . . . . . . . . . .......... ..... . . ............ .. .... . ....... . ... . . .. .
lowQualScore : 5 3 0 0 3 22222222 7 5 99 55555 22 4 11 11111111111 666 99999 6 888888888888 4 22 22 22 3333 5555555555 0 0 8 2 5 0 0 5 5 0 0 0 5 0 0000000000 00000 0 3 777777777777 33 7777 3 0000000 0 000 7 0 55 5
consensus : TTCTTGCTAACGATGTA-ANTNATCGATA--------TTT-GTCGTGT--TT-----TTTGGTAGTGTGTAG--TGT--T--------ATATT--TGT-T---TATG-TAATAT-------A----TGTCTCTTGATAAAGACGCGGGTTGCGTCGAAAAT--TTGAG--GTTTAAATAACCAACAGTGTCG-TGGCC-T--TTT----------CAGTGC-TGTCTATATACGAAGTGTATATTCNTCATACGTNGCCTGTNCNATGTATCAGNACAGGGATTTTCTATACACC-G-ATTACATTNTATATCACATGTCCATTG-T-TTGGGTT--TGCTGC-AATC-AATG---TT-AAATANACGAATC-GAGCGAATNAGGACGCGCCTTCTATCGTCCAA
Reference ( family-2724 ) : TTCTTGCTAACGATGTA-ANTNATCGATA--------TTT-GTCGTGT--TT-----TTTGGTAGTGTGTAG--TGT--T--------ATATT--TGT-T---TATG-TAATAT-------G----TGTCTCTTGATAAAGACGCGGGTTGCGTCGAAAAT--TTGAG--GTTTAAATAACCAACAGTGTCG-TGGCC-T--TTT----------CAGTGC-TGTCTATATACGAAGTGTATATTCNTCATACGTNGCCTGTNCNATGTATCAGNACAGGGATTTTCTATACACC-G-ATTACATTNTATATCACATGTCCATTG-T-TTGGGTT--TGCTGC-AATC-AATG---TT-AAATANACGAATC-GAGCGAATNAGGACGCGCCTTCTATCGTCCAA
gi|1 : TTCTTTCTAAGGATGTA-ACTAATTGATA--------TTT-GTCGGGT--TT-----TTTAGCATTGTGTAG--TGT--T--------TTATT--TGT-T---TCTT-TAATAT-------GATAATGTCTCTTGATAAAAACGCAGGTTGCGTCGAAAAT--TTGGG--GTTAAAATAACCAACAATGTTG-TGACC-T--TTT----------CAGTGC-T-CCTATACACCAAGTATATATTTTTCA-AGATGGCCTATCCCATAT-TCAGGACAA-------C--TACACTAA-ATTACACTCTATATCACATGTTTATTGTT-TTGGGTT--TGCT---AATC-AATG---TT---TTATACGGATC-GAGTGAATTAGGACGCGCCTTCT-TCGTCCAA
gi|10 : TTCTTGTTAACAATACATATTTATTAACT--------TTT-GTTGTCT--CT-----TTCT-TAATGTGTAG--TAT--T--------ATAT-----------------AGTAT-------A----TGTATCTTGATAAAGACACAGGTTGCGTCGAAAgtggctttttttcacgatgcgcgaccagtagtaagtaaagtatgtaaatca
gi|12 : ttagtatatcaattatcatTAG--TGTGAC--------ATGTT--TGT-T---TACA-TGATATTGAATAAA----TATCTCTTGATAAAGATGCGG-TTGCACTGAAATT--TTGAG--ATTTA--TAACCAACAGAATCA-TGGTC-T--TTC----------TAGTGC-T
gi|13 : tcaTAAACC-GTATTACATTATAAATCACATG------G-TATTGAGTTAATGCTGCAAATC-TATG---TTAAAATAGGCGAA------CGAATGAGGATACGCC--CTATCGTCCAA
gi|14 : acaacT--TT-----TTTGGTAGTGTGTAG--TAT--TTG------ATATT--TCG-T---TATG-TAATA---------------------------GACACGGGTTGCGTAGAAAAT--TTGAG--GTTAAAATAACCAACttag
gi|15 : ATT--TGT-T---TATA-TAATATTA-----A----TATCTCTTGATTAAAACGCCGTTTGAATTGGAAAT--GTGTG--GTTTGAATAATCAAg
gi|16 : TAT-------G----TGTCTCTTGGTTC-GACGCGGGTTGCATCAAAAAC--CTGAA--GCTTAA---------AGT-----TAGTC-TAGATT----------CAGTGC-TGTC
gi|17 : TCTTGACAAAG----------CGTCGAAAAT--TTGAG--GCTTAAATAACCATTAGTGTTGTTTGCCAT--TCT----------CAGTG
gi|18 : tgAT-------A----TGTCT-TTGATAAAGACGCGGGTTGCGTTGA-----------------AAATAACAATCAGCGTCG-TGGCC----TTC----------CGGTGC-
gi|19 : GCGT-AAAAATAATTGAC--GGTTAGATAACCAACAGTGCCG-TGGCC-T--TTT----------CAGTGCTTATCTAT
gi|2 : TCTTGCTTACGATATA-GTTAATTGATGATTGCCTTTTT-ATTGTGT--TTAGTGTTTTGATAGTGTGTAG--TGT--TTTCGTAGTATGTT--CGT-TGGATATG-CAACAC-------G----TGTCTCTTGATAAAGACGCGGGTTGCGGCGAAAAT--TTGAG--GTTTAAATAA-----------------------TT----------CAGTGC-TGTCTATATAC--ATTGTACATTCCTCATACGTTACCTGTACAATGTATCAATACAGGGATTTTCTATACACT-G---TACCTTTTGTACCAC-T-TCCATTA-T----GGTT--TGA-GC-GATTAAATGAATTT-AAATAAACAAATCAGAGTGAA
gi|20 : cGT-A---TATGATAATAT-------G----TATCTCTTGATAAAGACACAGGTTGTGTC
gi|3 : ctttcgtaaGT--TT-----TTT--CAGTGTGT------T--TG-------ATGTTCATGT-A---TATG-TAATAT-------G----TGTCTCT------AGACGCGGGTTGCGTCGa
gi|5 : aatattcacatgtttgtagttgcatatatcttcttatttttactctcatcatgatcgttttgaagtttctctattttttgtactcctattattaactgttctcttcctgacccgttgatggcaccggttctccacaccatcgtccgtagacactcttgtgacgaacaggatgaatactcttgcttacattaatttccTTCTTGTTAAGGATGTAGAATAAT-GATA--------TTT-GTCCTGT--TT-----T---GTAGTGTGTAA--TGT--T--------ATATA--TGT-T---GATG-TAGTAT-------A----TATCTCTTGATAAAGACGCGGACTGCGTCGAAAAA--TT-AG--GTTTAAATAATCAACTGTGTCG-TGGTC-T--TTT----------CAGTGC-TATATATATATGAAGT-TA-ATTCATCA
gi|6 : ctagtaatcaatgtatcaTGTA-ATTGGTCGTAA--------TTTCGTAGTGTGCTT-----TCTG-TA------AA--TGA--C--------AAACA--TGGAT---CATG-TAATGT-------A----GGTCTCCTGATAAGAACATGGGTTGCGTCGGAATT--TCAAG--GTTT-GATAACCAATGGTGTacata
gi|8 : acaatgTGTA-AGTTATCAATA--------TTT-GTC--GT--TT-----TTTCGTTGTTTGTAGTTTGT--T--------ATATT--CAT-T---CATG-CAATAT-------A----TGTCTCTTGATGAAAACGCGGATTGTGTGGACAAT--TTGAG--GTTTAGATAACCGACACTGTC--TAGTC-C--TTT----------CGGTGaagtgcgagatatataaaatcattgta
gi|9 : ----TGTCTCTTGATAAAGATTCGGGTTGTGT--AAAAA--CTGAGAAGTTTAAAT-ACCAACAGTGCCA-TGGCT-T--TTTTTTTTTTTTGCAGTGC-T-------TACAAAATGTATATt
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|4 ): ATGATTCTGCGTTTAAAGACTGAAGTATTAACCAACTTTGTGTATAAAATTTTCAATCATTTGAAATCTTCACACATTTCAAATCGCTCTCTTCTTATTTCACTATCATCTTGTCGTTTCCTTAAATTCTTCCTTTAATTTTGCAATTTTTTTTAAAATATCGCTCTTCCCGACTCGTTGTTGGCACGGACTCTCTTCGTTATCATCTGTAGACACGCTTGTGACGAAATACGATATATCTTGGGTTTTATTCTCGGTTT
Unaligned ( gi|7 ): AATTACCAACCAACTTCTTTAATCTTTTCACTTTAAATCACAATCCTGCCCTATATTTATACCATCATCTGTTGTTTGCGAAGTTCTCTCTTTAATTTTCGCCATGTTTATATTTCTTCTCCGACCGTTAATGGCACGGACAC
Unaligned ( gi|11 ): CTTTCCTCTTCTGTTGGTGGCACAGACTCTCTACACCATCATCTACAGACACTCTTGTGACGAACCGGCTGACAAAAGAGAAGCTGGGCATATTTTCTTTGTCAAGTCAGTGGGATA