lowQualScore : 11 1 3333333333 22222 7777777777777777777 1111111111 11111 22222
lowQualScore : 22 2 0 1 7 2222222222 33333 77 3 8 5555555555555555555 1 5 6 44 44 3333333333 55 5 44444 11111
lowQualScore : .. . . . . .......... ..... .. . . ................... . . . .. .. .......... .. . ..... .....
lowQualScore : 00 5 2 8 8 8888888888 22222 33 7 1 0000000000000000000 7 2 8 66 66 2222222222 22 7 33333 88888
consensus : CCGATATAGCAAAAACGCTTTCATGTTAGCG-A-------AAGCCGTCATTTGATT--GGTCAA-TTGTGAAAGGTCAAAAAA---CATGACCTC--AAACGCAATGCTGTCAGATCCTTCTCCAGTG--TAA--CGGTT----A-----GAGA-AGATCTGAT-TT-----TAATTAGATT-ATATCATAAA
Reference ( gi|5 ) : CCGATATAGCAAACACACTTTCAAGCTAGCA-A-------AAGCCGTCATTTGATT--TATCAG-TTGCGAAAGGTAAAAAAAACCCATGACCTC--AAACGCAATGCTATCAGATCCTTCTCCGGTG--TAA--CGGTT----A-----GAGA-GGATCTGAT-TT-----TAATTAGATC-ATATTATAAATGATTTCAAGTACCATGCTAG
gi|3 : CTGATATAGCGAAAACGCTTTCATGTTAACGTACATATGTAAGTCGACATTTGATT--GGTCAA-TTGTGAAAGGTAAAAAAAA-ACATGACCTC--AATCG--------------CCTTCTTCAGAG--TAA--CGTTT----A-----GAGA-AGGTCTGGT-TT-----TAATTAGAT
gi|2 : ggaaagttctgcacacatcactctttgctgctgtcatgtctatactcccacgcttcttggtaattcccgtgtgtacgttcaatacagaggatgttCCGATGTAGCAAAAACGCTTTCATGTTAGCG-C-------AAGTCGTAATTTGATT--AGTCAA-TTGTGAAAGGCCAAAAA-------------------GCAATACTGGCAGATCCTTCTCCACTG--TAA--CGTTT----T-----GGGA-AGATCTGaagg
gi|7 : gcacgtcggatttattgatagacgcataacttgagcggcaaacgtaatttacgaattccccactatatttagtttttaaaagagatcactgttatcttctgcatgcaaacattttaattcaagcatttagtaaatggaaagttttgcacatttggtgatctaacatcgcttttagccaccatcatttattaccgtgcgtacaatcagtaacaaggatgttCCGATATAGCAT-CAAAATTCCATGATTGCG-A-------AAGCTGTCATTTGATT--GGCCAG-TTGTGAAAGGTCAAATA-------------------GCAATGCTGTCAGATCCATCTTCAGTG--TAA--CGGTT----A-----G
gi|4 : tgcttttcgagaaatattaccgtgcgtacgttaagtaccgaggatgttCCGCTATAGCAAAAAGATTTTCATGTTAGCA-A-------AAGCCTTCATTTGATT--GGTCAA-TTGTGAAAGGTCAAA
gi|1 : atactatatgactgtccaagcatatgtatgcaatctttttaaattcaagttaaggggaaaatctgttattgctcttcgccaccatcatctcttttagcattaattctccgagtcattaaatactaaaaatgttAAGTTAGCG-A-------AAGCTGTCATTTGATTGGTA-CAG-TTGTGTAAGGTCCAAAAA---CATGACCTCAAAAATGCAATGCTGTCAGGTCCCTCTCCAATG--TAA--TGGTT----A-----GAGA-AGAc
gi|6 : atatattactgttctcttgtatatgcaaattttttttaaagcaagcatgttttaaagagaaagttctgcacatactaagtatggtgttccaacatcccttttagccgctgtcgtctcttttagttattctcccgcgcttcttcgtaatcattcctgagcgtacgttccaaggatgttctaataaTTAATT--GATCAAATTTC-AAAGGTAAACTAA---CATGACATT--AAACGCAATTCCGCCAGATCCTTCTTCAGTA--TAA--TGA------A-----GAGattacattggcaatagacattcacaaagcagtaaattcttagctgtcacattaagcttcagataaaatttcc
gi|9 : tctaacatcacttatagccccggaaatttctttcgatttcgccgtttgtacaatgaataccaaggaagttccgatatttcagcaaaTGTGAAAGGTCAACAA----CATGACCTC--AAACGCAATGCTGTCAGATCCTTCTCCAGTG--TAA--CGGTT----A-----GAGA-AGATCTGAT-TT-----TAATTAGATT-A
gi|11 : TACTGTCAGATCCTTCTCCAGTG--CAA--AGGTC----A-----GGGA-AAATCTTATGTTACATGTAATTAGATTGAT-TCATAAAgtgggtatagt
gi|9 : aaaatgaagacATCAGATC-TTCTC-------TAA--CCGTT----ACACTGGAGAAGGATCTGAgctgcaatactttaca
gi|14 : tgtgaaaggtcaacaacatgacctcaaacgcaatgctgGATCCCTTTCCAGTG--TAA--AGGTT----G-----GAGA-AGGTCTGAT-TT-----TGATAAGAtttaattagattagtgggtatagt
gi|12 : CTTTCTCCAGTGGTTAAAGCGATT----A-----GAGA-GGATCTGA--TT-----TAATTAGATT-GTATTActga
gi|13 : cTTCTCCAGTG--TAA--CGATTTGTAAT----GAGG-GGATCTGAT-TT-----TAATTAGATatttacag
gi|15 : TTCTCTAGTG--TAA--CAAAT----A-----GAGA-AGATCTGAT-TT-----TAATtgatttatcg
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|8 ): AAAGGTATCTATGGGTACCCCACTAAATTTACAAGTTTTTAAATATTCTCATTGTTTTCTTGCATGCATATATTTTTAATTCAAGCATGTAGATAGGGTAAAGTTCTGTGGTGTTCTAATATCCC
Unaligned ( gi|10 ): CTGTTTTTGATGCATGAATATACTTTAATTCAAGCATTAGTAAATATAATGTTCTGCACACGTTGTGTTCTAACATCGCTACTGGTCGTCATGATCTCTTG
Unaligned ( gi|16 ): ATGCAAACATGTAGGTAAGGGGAAGTTCTGTGGTGTTCTAAGAT
Alignments
lowQualScore : 11 222222222 2222 11111
lowQualScore : 11 66 333333333 5 66 2222 0 999 0 555 44 44 7777 3 5 22222 6 7 0
lowQualScore : .. .. ......... . .. .... . ... . ... .. .. .... . . ..... . . .
lowQualScore : 00 44 333333333 7 99 0000 7 444 2 888 66 66 1111 3 0 55555 7 3 7
consensus : CCGATATAGCA--AAAACGCTTTCATGTTAGCG-----A---AAGCCGTCATTTGATTGGT-CAGTTGTGAAAGGT--CAAAAAA---CATGACCTCAAA--CGCAATGCTGTCAGATCCT---TCTCCAGTG--TAA--CGGTT----A-GAGAAGATCTGAT-TT-----TAATTAGATT-ATATTATAAA
Reference ( family-251 ) : CCGATATAGCA--AAAACGCTTTCATGTTAGCG-----A---AAGCCGTCATTTGATTGGT-CAATTGTGAAAGGT--CAAAAAA---CATGACCTCAAA--CGCAATGCTGTCAGATCCT---TCTCCAGTG--TAA--CGGTT----A-GAGAAGATCTGAT-TT-----TAATTAGATT-ATATCATAAA
gi|1 : GTTAGCG-----A---AAGCTGTCATTTGATTGGTACAGTTGTGTAAGGT--CCAAAAA---CATGACCTCAAAAATGCAATGCTGTCAGGTCCC---TCTCCAATG--TAA--TGGTT----A-GAGAAGA
gi|11 : atatattactgttctcttgtatatgcaaattttttttaaagcaagcatgttttaaagagaaagttctgcacatactaagtatggtgttccaacatcccttttagccgctgtcgtctcttttagttattctcccgcgcttcttcgtaatcattcctgagcgtacgttccaaggatgttctaataaaaTACTGTCAGATCCT---TCTCCAGTG--CAA--AGGTC----A-GGGAAAATCTTATGTTACATGTAATTAGATTGAT-TCATAAAattacattggcaatagacattcacaaagcagtaaattcttagctgtcacattaagcttcagataaaatttcc
gi|12 : aaaatgaagacCTT---TCTCCAGTGGTTAAAGCGATT----A-GAGAGGATCTGA--TT-----TAATTAGATT-GTATTAgctgcaatactttaca
gi|13 : cT---TCTCCAGTG--TAA--CGATTTGTAATGAGGGGATCTGAT-TT-----TAATTAGATT-atttacag
gi|14 : GATCCC---TTTCCAGTG--TAA--AGGTT----G-GAGAAGGTCTGAT-TT-----TGATAAGACT-gatttatcg
gi|15 : TGTCTGATTTTAATTCTCTAGTG--TAA--CAAAT----A-GAGAAGATCTGAT-TT-----TAATga
gi|2 : CCGATGTAGCA--AAAACGCTTTCATGTTAGCG-----C---AAGTCGTAATTTGATTAGT-CAATTGTGAAAGGC--CAAAAA-------------------GCAATACTGGCAGATCCT---TCTCCACTG--TAA--CGTTT----T-GGGAAGATCTG
gi|3 : gcacgtcggatttattgatagacgcataacttgagcggcaaacgtaatttacgaattccccactatatttagtttttaaaagagatcactgttatcttctgcatgcaaacattttaattcaagcatttagtaaatggaaagttttgcacatttggtgatctaacatcgcttttagccaccatcatttattaccgtgcgtacaatcagtaacaaggatgttCTGATATAGCG--AAAACGCTTTCATGTTAACGTACATATGTAAGTCGACATTTGATTGGT-CAATTGTGAAAGGTAAAAAAAAA---CATGACCTCAAT--CG--------------CCT---TCTTCAGAG--TAA--CGTTT----A-GAGAAGGTCTGGT-TT-----TAATTAGAT
gi|4 : ggaaagttctgcacacatcactctttgctgctgtcatgtctatactcccacgcttcttggtaattcccgtgtgtacgttcaatacagaggatgttCCGCTATAGCA--AAAAGATTTTCATGTTAGCA-----A---AAGCCTTCATTTGATTGGT-CAATTGTGAAAGGT--CAAAaagg
gi|5 : atactatatgactgtccaagcatatgtatgcaatctttttaaattcaagttaaggggaaaatctgttattgctcttcgccaccatcatctcttttagcattaattctccgagtcattaaatactaaaaatgttCCGATATAGCA--AACACACTTTCAAGCTAGCA-----A---AAGCCGTCATTTGATTTAT-CAGTTGCGAAAGGT--AAAAAAAACCCATGACCTCAAA--CGCAATGCTATCAGATCCT---TCTCCGGTG--TAA--CGGTT----A-GAGAGGATCTGAT-TT-----TAATTAGATC-ATATTATAAAc
gi|6 : TTAATTGAT-CAAATTTCAAAGGT--AAACTAA---CATGACATTAAA--CGCAATTCCGCCAGATCCT---TCTTCAGTA--TAA--TGA------A-GAGtgatttcaagtaccatgctag
gi|7 : tctaacatcacttatagccccggaaatttctttcgatttcgccgtttgtacaatgaataccaaggaagttccgatatttcagcaaaCCGATATAGCATCAAAA---TTCCATGATTGCG-----A---AAGCTGTCATTTGATTGGC-CAGTTGTGAAAGGT--CAAATA-------------------GCAATGCTGTCAGATCCA---TCTTCAGTG--TAA--CGGTT----A-G
gi|9 : tgcttttcgagaaatattaccgtgcgtacgttaagtaccgaggatgttTGTGAAAGGT--CAACAA----CATGACCTCAAA--CGCAATGCTGTCAGATCCT---TCTCCAGTG--TAA--CGGTT----A-GAGAAGATCTGAT-TT-----TAATTAGATT-A
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): AAAGGTATCTATGGGTACCCCACTAAATTTACAAGTTTTTAAATATTCTCATTGTTTTCTTGCATGCATATATTTTTAATTCAAGCATGTAGATAGGGTAAAGTTCTGTGGTGTTCTAATATCCC
Unaligned ( gi|10 ): CTGTTTTTGATGCATGAATATACTTTAATTCAAGCATTAGTAAATATAATGTTCTGCACACGTTGTGTTCTAACATCGCTACTGGTCGTCATGATCTCTTG
Unaligned ( gi|16 ): ATGCAAACATGTAGGTAAGGGGAAGTTCTGTGGTGTTCTAAGAT
Alignments
lowQualScore : 11 222222222 2222 11111 1 1
lowQualScore : 11 66 333333333 5 66 2222 0 999 0 555 44 44 7777 3 5 22222 3 5
lowQualScore : .. .. ......... . .. .... . ... . ... .. .. .... . . ..... . .
lowQualScore : 00 44 333333333 7 99 0000 7 444 2 888 66 66 1111 3 0 55555 3 5
consensus : CCGATATAGCA--AAAACGCTTTCATGTTAGCG-----A---AAGCCGTCATTTGATTGGT-CAGTTGTGAAAGGT--CAAAAAA---CATGACCTCAAA--CGCAATGCTGTCAGATCCT---TCTCCAGTG--TAA--CGGTT----A-GAGAAGATCTGAT-TT-----TAATTAGATT-ATATTATAAA
Reference ( family-251 ) : CCGATATAGCA--AAAACGCTTTCATGTTAGCG-----A---AAGCCGTCATTTGATTGGT-CAGTTGTGAAAGGT--CAAAAAA---CATGACCTCAAA--CGCAATGCTGTCAGATCCT---TCTCCAGTG--TAA--CGGTT----A-GAGAAGATCTGAT-TT-----TAATTAGATT-ATATTATAAA
gi|1 : GTTAGCG-----A---AAGCTGTCATTTGATTGGTACAGTTGTGTAAGGT--CCAAAAA---CATGACCTCAAAAATGCAATGCTGTCAGGTCCC---TCTCCAATG--TAA--TGGTT----A-GAGAAGA
gi|11 : atatattactgttctcttgtatatgcaaattttttttaaagcaagcatgttttaaagagaaagttctgcacatactaagtatggtgttccaacatcccttttagccgctgtcgtctcttttagttattctcccgcgcttcttcgtaatcattcctgagcgtacgttccaaggatgttctaataaaaTACTGTCAGATCCT---TCTCCAGTG--CAA--AGGTC----A-GGGAAAATCTTATGTTACATGTAATTAGATTGAT-TCATAAAattacattggcaatagacattcacaaagcagtaaattcttagctgtcacattaagcttcagataaaatttcc
gi|12 : aaaatgaagacCTT---TCTCCAGTGGTTAAAGCGATT----A-GAGAGGATCTGA--TT-----TAATTAGATT-GTATTAgctgcaatactttaca
gi|13 : cT---TCTCCAGTG--TAA--CGATTTGTAATGAGGGGATCTGAT-TT-----TAATTAGATTGAT-TTATatttacag
gi|14 : GATCCC---TTTCCAGTG--TAA--AGGTT----G-GAGAAGGTCTGAT-TT-----TGATAAGACT-cg
gi|15 : TGTCTGATTTTAATTCTCTAGTG--TAA--CAAAT----A-GAGAAGATCTGAT-TT-----TAATga
gi|2 : CCGATGTAGCA--AAAACGCTTTCATGTTAGCG-----C---AAGTCGTAATTTGATTAGT-CAATTGTGAAAGGC--CAAAAA-------------------GCAATACTGGCAGATCCT---TCTCCACTG--TAA--CGTTT----T-GGGAAGATCTG
gi|3 : gcacgtcggatttattgatagacgcataacttgagcggcaaacgtaatttacgaattccccactatatttagtttttaaaagagatcactgttatcttctgcatgcaaacattttaattcaagcatttagtaaatggaaagttttgcacatttggtgatctaacatcgcttttagccaccatcatttattaccgtgcgtacaatcagtaacaaggatgttCTGATATAGCG--AAAACGCTTTCATGTTAACGTACATATGTAAGTCGACATTTGATTGGT-CAATTGTGAAAGGTAAAAAAAAA---CATGACCTCAAT--CG--------------CCT---TCTTCAGAG--TAA--CGTTT----A-GAGAAGGTCTGGT-TT-----TAATTAGAT
gi|4 : ggaaagttctgcacacatcactctttgctgctgtcatgtctatactcccacgcttcttggtaattcccgtgtgtacgttcaatacagaggatgttCCGCTATAGCA--AAAAGATTTTCATGTTAGCA-----A---AAGCCTTCATTTGATTGGT-CAATTGTGAAAGGT--CAAAaagg
gi|5 : atactatatgactgtccaagcatatgtatgcaatctttttaaattcaagttaaggggaaaatctgttattgctcttcgccaccatcatctcttttagcattaattctccgagtcattaaatactaaaaatgttCCGATATAGCA--AACACACTTTCAAGCTAGCA-----A---AAGCCGTCATTTGATTTAT-CAGTTGCGAAAGGT--AAAAAAAACCCATGACCTCAAA--CGCAATGCTATCAGATCCT---TCTCCGGTG--TAA--CGGTT----A-GAGAGGATCTGAT-TT-----TAATTAGATC-ATATTATAAAc
gi|6 : TTAATTGAT-CAAATTTCAAAGGT--AAACTAA---CATGACATTAAA--CGCAATTCCGCCAGATCCT---TCTTCAGTA--TAA--TGA------A-GAGtgatttcaagtaccatgctag
gi|7 : tctaacatcacttatagccccggaaatttctttcgatttcgccgtttgtacaatgaataccaaggaagttccgatatttcagcaaaCCGATATAGCATCAAAA---TTCCATGATTGCG-----A---AAGCTGTCATTTGATTGGC-CAGTTGTGAAAGGT--CAAATA-------------------GCAATGCTGTCAGATCCA---TCTTCAGTG--TAA--CGGTT----A-G
gi|9 : tgcttttcgagaaatattaccgtgcgtacgttaagtaccgaggatgttTGTGAAAGGT--CAACAA----CATGACCTCAAA--CGCAATGCTGTCAGATCCT---TCTCCAGTG--TAA--CGGTT----A-GAGAAGATCTGAT-TT-----TAATTAGATT-A
blockSeqs : TC CG TACATATGT . AA AACC T AAT GT AG TGTA T . . G A
blockSeqs : . GA C . . A A . . . . . . . . A
blockSeqs : . CA A . . A A . . . . . . . . .
blockSeqs : . . A . . . A . . . . . . . .
blockSeqs : A . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . .
blockSeqs : . . . . .
blockSeqs : . . . . .
blockSeqs : . . . . .
blockSeqs : . . . . .
blockSeqCons : A*** A** *****
originalCons : CCGATATAGCA--AAAACGCTTTCATGTTAGCG-----A---AAGCCGTCATTTGATTGGT-CAGTTGTGAAAGGT--CAAAAAA---CATGACCTCAAA--CGCAATGCTGTCAGATCCT---TCTCCAGTG--TAA--CGGTT----A-GAGAAGATCTGAT-TT-----TAATTAGATT-ATATTATAAA
finalCons : CCGATATAGCA--AAAACGCTTTCATGTTAGCG-----A---AAGCCGTCATTTGATTGGT-CAGTTGTGAAAGGT--CAAAAAA---CATGACCTCAAA--CGCAATGCTGTCAGATCCT---TCTCCAGTG--TAA--CGGTT----A-GAGAAGATCTGAT-TT-----TAATTAGATT-ATATTATAAA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): AAAGGTATCTATGGGTACCCCACTAAATTTACAAGTTTTTAAATATTCTCATTGTTTTCTTGCATGCATATATTTTTAATTCAAGCATGTAGATAGGGTAAAGTTCTGTGGTGTTCTAATATCCC
Unaligned ( gi|10 ): CTGTTTTTGATGCATGAATATACTTTAATTCAAGCATTAGTAAATATAATGTTCTGCACACGTTGTGTTCTAACATCGCTACTGGTCGTCATGATCTCTTG
Unaligned ( gi|16 ): ATGCAAACATGTAGGTAAGGGGAAGTTCTGTGGTGTTCTAAGAT
Alignments
lowQualScore : 11 222222222 2222 11111 1 1
lowQualScore : 11 66 333333333 5 66 2222 0 999 0 555 44 44 7777 3 5 22222 3 5
lowQualScore : .. .. ......... . .. .... . ... . ... .. .. .... . . ..... . .
lowQualScore : 00 44 333333333 7 99 0000 7 444 2 888 66 66 1111 3 0 55555 3 5
consensus : CCGATATAGCA--AAAACGCTTTCATGTTAGCG-----A---AAGCCGTCATTTGATTGGT-CAGTTGTGAAAGGT--CAAAAAA---CATGACCTCAAA--CGCAATGCTGTCAGATCCT---TCTCCAGTG--TAA--CGGTT----A-GAGAAGATCTGAT-TT-----TAATTAGATT-ATATTATAAA
Reference ( family-251 ) : CCGATATAGCA--AAAACGCTTTCATGTTAGCG-----A---AAGCCGTCATTTGATTGGT-CAGTTGTGAAAGGT--CAAAAAA---CATGACCTCAAA--CGCAATGCTGTCAGATCCT---TCTCCAGTG--TAA--CGGTT----A-GAGAAGATCTGAT-TT-----TAATTAGATT-ATATTATAAA
gi|1 : GTTAGCG-----A---AAGCTGTCATTTGATTGGTACAGTTGTGTAAGGT--CCAAAAA---CATGACCTCAAAAATGCAATGCTGTCAGGTCCC---TCTCCAATG--TAA--TGGTT----A-GAGAAGA
gi|11 : atatattactgttctcttgtatatgcaaattttttttaaagcaagcatgttttaaagagaaagttctgcacatactaagtatggtgttccaacatcccttttagccgctgtcgtctcttttagttattctcccgcgcttcttcgtaatcattcctgagcgtacgttccaaggatgttctaataaaaTACTGTCAGATCCT---TCTCCAGTG--CAA--AGGTC----A-GGGAAAATCTTATGTTACATGTAATTAGATTGAT-TCATAAAattacattggcaatagacattcacaaagcagtaaattcttagctgtcacattaagcttcagataaaatttcc
gi|12 : aaaatgaagacCTT---TCTCCAGTGGTTAAAGCGATT----A-GAGAGGATCTGA--TT-----TAATTAGATT-GTATTAgctgcaatactttaca
gi|13 : cT---TCTCCAGTG--TAA--CGATTTGTAATGAGGGGATCTGAT-TT-----TAATTAGATTGAT-TTATatttacag
gi|14 : GATCCC---TTTCCAGTG--TAA--AGGTT----G-GAGAAGGTCTGAT-TT-----TGATAAGACT-cg
gi|15 : TGTCTGATTTTAATTCTCTAGTG--TAA--CAAAT----A-GAGAAGATCTGAT-TT-----TAATga
gi|2 : CCGATGTAGCA--AAAACGCTTTCATGTTAGCG-----C---AAGTCGTAATTTGATTAGT-CAATTGTGAAAGGC--CAAAAA-------------------GCAATACTGGCAGATCCT---TCTCCACTG--TAA--CGTTT----T-GGGAAGATCTG
gi|3 : gcacgtcggatttattgatagacgcataacttgagcggcaaacgtaatttacgaattccccactatatttagtttttaaaagagatcactgttatcttctgcatgcaaacattttaattcaagcatttagtaaatggaaagttttgcacatttggtgatctaacatcgcttttagccaccatcatttattaccgtgcgtacaatcagtaacaaggatgttCTGATATAGCG--AAAACGCTTTCATGTTAACGTACATATGTAAGTCGACATTTGATTGGT-CAATTGTGAAAGGTAAAAAAAAA---CATGACCTCAAT--CG--------------CCT---TCTTCAGAG--TAA--CGTTT----A-GAGAAGGTCTGGT-TT-----TAATTAGAT
gi|4 : ggaaagttctgcacacatcactctttgctgctgtcatgtctatactcccacgcttcttggtaattcccgtgtgtacgttcaatacagaggatgttCCGCTATAGCA--AAAAGATTTTCATGTTAGCA-----A---AAGCCTTCATTTGATTGGT-CAATTGTGAAAGGT--CAAAaagg
gi|5 : atactatatgactgtccaagcatatgtatgcaatctttttaaattcaagttaaggggaaaatctgttattgctcttcgccaccatcatctcttttagcattaattctccgagtcattaaatactaaaaatgttCCGATATAGCA--AACACACTTTCAAGCTAGCA-----A---AAGCCGTCATTTGATTTAT-CAGTTGCGAAAGGT--AAAAAAAACCCATGACCTCAAA--CGCAATGCTATCAGATCCT---TCTCCGGTG--TAA--CGGTT----A-GAGAGGATCTGAT-TT-----TAATTAGATC-ATATTATAAAc
gi|6 : TTAATTGAT-CAAATTTCAAAGGT--AAACTAA---CATGACATTAAA--CGCAATTCCGCCAGATCCT---TCTTCAGTA--TAA--TGA------A-GAGtgatttcaagtaccatgctag
gi|7 : tctaacatcacttatagccccggaaatttctttcgatttcgccgtttgtacaatgaataccaaggaagttccgatatttcagcaaaCCGATATAGCATCAAAA---TTCCATGATTGCG-----A---AAGCTGTCATTTGATTGGC-CAGTTGTGAAAGGT--CAAATA-------------------GCAATGCTGTCAGATCCA---TCTTCAGTG--TAA--CGGTT----A-G
gi|9 : tgcttttcgagaaatattaccgtgcgtacgttaagtaccgaggatgttTGTGAAAGGT--CAACAA----CATGACCTCAAA--CGCAATGCTGTCAGATCCT---TCTCCAGTG--TAA--CGGTT----A-GAGAAGATCTGAT-TT-----TAATTAGATT-A
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): AAAGGTATCTATGGGTACCCCACTAAATTTACAAGTTTTTAAATATTCTCATTGTTTTCTTGCATGCATATATTTTTAATTCAAGCATGTAGATAGGGTAAAGTTCTGTGGTGTTCTAATATCCC
Unaligned ( gi|10 ): CTGTTTTTGATGCATGAATATACTTTAATTCAAGCATTAGTAAATATAATGTTCTGCACACGTTGTGTTCTAACATCGCTACTGGTCGTCATGATCTCTTG
Unaligned ( gi|16 ): ATGCAAACATGTAGGTAAGGGGAAGTTCTGTGGTGTTCTAAGAT