lowQualScore : 333333333333 33 11 1 1 1 33 1 333 44444444444444 555555 555555 1 2 2 3333 1 333 2 222 333 1 33 4 333 1 4 11 66666666666666666666 1111 22 11 11 1 3333 2222 22 1 2222 1 22222 777777777777 1 1 2 22 7777777777777 222 22 11 77777777 11 1 555 5555 4 33 1111 4 4444 333 2 2 1 333 4 3333333333 3 11 3 1 222222 2 1 3333333333 11111111 1111 111111
lowQualScore : 6666 3 1 999999999999 3 77 5 5 00 11 7 0 88 8 7 7 6 5 6 6 1 44 3 3 111 7 00000000000000 777777 222222 55 1 0 0 7777 2 5 2 2 111 2 6 0 222 88 000 3 3 99 0 111 2 0 00 2 3 22222222222222222222 8888 6 77 88 77 7 0000 3333 44 0 0000 0 00000 8 3 333333333333 7 1 5 6 6 3 0 99 1 3333333333333 4 7 777 6 5 1 3 3 77 3 6 33 55555555 11 0 1 0 5 000 6 2222 6 0 6 0 3 0 6 11 1 6 99 6 4444 6 0 6 3 0000 1 3 2 777 6 6 6 0 6 3 444 1 0 6 6 7777777777 77 6 0 22 0 6 0 0 888888 8 0 666 8 1 77 77 5 1 7777777777 88888888 2222 5 4 222222 4 4
lowQualScore : .... . . ............ . .. . . .. .. . . .. . . . . . . . . .. . . ... . .............. ...... ...... .. . . . .... . . . . ... . . . ... .. ... . . .. . ... . . .. . . .................... .... . .. .. .. . .... .... .. . .... . ..... . . ............ . . . . . . . .. . ............. . . ... . . . . . .. . . .. ........ .. . . . . ... . .... . . . . . . . .. . . .. . .... . . . . .... . . . ... . . . . . . ... . . . . .......... .. . . .. . . . . ...... . . ... . . .. .. . . .......... ........ .... . . ...... . .
lowQualScore : 5555 1 5 000000000000 6 44 0 0 44 00 0 8 66 0 0 8 7 0 0 7 0 55 2 3 000 7 00000000000000 555555 000000 00 5 0 0 5555 5 0 5 5 000 5 0 0 000 55 000 7 3 00 0 000 0 0 00 5 0 55555555555555555555 0000 0 55 55 55 0 5555 0000 00 5 5555 0 00000 0 2 444444444444 0 0 2 7 5 3 0 22 8 3333333333333 2 3 333 7 0 0 5 2 77 7 7 88 00000000 00 2 7 8 0 000 0 0000 0 6 7 8 2 0 7 00 0 7 22 7 2222 7 0 7 8 0000 4 2 8 000 7 7 7 0 7 3 222 0 0 7 0 7777777777 77 0 0 22 2 0 0 0 888888 0 3 444 6 4 99 99 7 7 2222222222 11111111 1111 7 4 888888 0 0
consensus : ACTACTCAAAATTTGAT----AAGGAT-CACTA--G-TTATATATANATGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TAAATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATTCATGAACGGC-ATGAACTTTTATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCATTAC-AAAAAGTTAA-CAGCAANCCAGAGAAAGAA-TT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTACATGTTGTCGATGAAAGTGTCAATGNNGGGTNTGGCCTCCCTCTGGCATCAATGACGGGGCTTGACAACNTCGAGCNATGCTNTCAAATGANCACCCGGGTGTTTCCAATGGGAAGGTTGTTTCCACTCTTCCATNAGGGCGTTTCCGAGCTCTGCC-AAAGTCGT-GGATT-GTGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACACGCTC-AATCGGGTTCAAGTC-CGGCGNGCGCGCTGGCCAGTCCATACGGANANTTGTCTCCTGCTGAAGATACTGCTCCACCACCCCTGGCGCGAAATGAAGACNGGCGTTATCATCCCATCAGGNATGACNCTCAGGNCCAACANCACCAGCG-TAGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGC---CNCCCCCGGTCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCA-CCCCAGACCATGATGGAACCGCCA---CCA-TA--G-ACGGTCATGTTTCACT-GATGTTGGCATCAATGGAAACGTTCACGTC-GTCGTCGCCACACTCGG-TGCCTCC--TGTCTGTAAAGTCCAAACAATACCTGG--A-C---CTCATCGGTG--AACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTCTCAGAGGGACTCGAACATATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTAT-CGTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCAC--CCCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATGAGCCAGCGTCAAGCATT-CCAA-TACATCTGCC-C-AGTTGCTCTGTCGT-CAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATA-AACG-T-AGTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCG-ATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAA-CTGTG------ATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTT-GTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAAT-TACACACAT------ATAACC-TAGTG-ATCCTTATCAA
Reference ( gi|1 ) : ACTACTCAAAATTTGAT----AAGGAT-CACTA--G-TTATATATATATGTATGTA-ATTTACCA-CTAACATAACAAAATCCA--TAATTTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAAATCATGAACGAC-ATGAACGTTTATTAATACGGAATGCTTG-AAATCTGAT-ACAACACCAAAAGGCATTTCATTAC-AAAAAGTT-A-CAGCAATCCAGAGAAAG-A-TT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATG-A-GT-TCAATACCGGGTATGGCCTCCC-TTG-CATCAATGAC--G-CTTGACAACGTCGATCCATGCTGTC-A-TAAGCACCCGAATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTG-C-AAAGTCGT-GGATTGGTGCTCTACGGCGTGAAAGGGCAACCTGC-GCATGTTCCATACATGCTC-A-TCGGGTTCAAGTCGCAGCGAACGCGCTGGCCAGTCCATACGGACAATTGTCCTCGGCTGAAGGTACTGCT-CACCACCCCTGGCGTGA--TGAAGAAGGGCGATATCACCCCATCAGGGATGA-ACTCAGGACCAACAACACCAGCG-TAGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGC---CACCATCGGTCAATGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTACTGATTCCA-CCC-AGACCATGA-GGAACCACCA---ACC-TACCG-ACGGTCATGTTTCTCT-GATGTTGGCATCAATGGAAACGTTCACGTTTGTCGTCGCCACACTCGG-TGCCTCC--TGTCTGTAAAGTCCAAACAATACCTGG--AGTGGACTCATCGGTG--AACAGGACTTGAACACAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCC--ATCCAATCGCTCTCGCCGGTGTCGAACAGTTTTAGAGGGACTCAAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTAT-CGTCTGAGTGGACACATTCACCCCCGAGCGCGTTCAGGAGGTCGTTATGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCGTTCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCAC--CCCCAT-GTCGG----TGTGCT-GCTGTACCAAAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGCAATGTGCAACGTCACGCTGTGAAT-A-CCAGCGTCAAGCATT-CC-A-TACATCTG-C-C-AGTTGCTCTGTCGT-C-GGCAACGCCTTA-ACGTTGAGGGG-GCGTTGTGTTGAAT-AGCG-A-AGTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGGC-CCA-ATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAACAT-AA-CTGTG------ATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTGCAAG-TT-GTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAAT-TACACACAT------ATAACC-TAGTG-ATCCTTATCAA
gi|2 : ACTACTCAAAATTTGAT----AAGGAT-CACTA--G-----AT-TATATGTGTGTA-ATTTACCA-CTAACATAACAAAAAACAAACAAATT--A-CTCAGAAAAGTGTTTAGTCA-GGGTATGAATCGACATTCATGAACGTC-ATGAACTTTTATCAATACGAGATGCT----------------ACATT--------TTTCATTAC-AAAAACTT-AACAGCTATCCAGAGAAAG-AATT--AC--ACAGTTTTTGGGGATAGTCCATCATTACACTTA------GTCGATG-AAGTGTCAATGACGGGTGTAGCCTCCC-CTGGCATCAATGAC--GGCTTGACAACCTCGAGCAATGCTCTC-AATGAGCACCCGGATGTTTCCAATGGGAAGGTTGTT-CCACTCTTCCATTAGGGCGTTTCCGAGCTCTG-CCAAAGTGGTAGGAT--GTGCTGTACGGCGTGAGAGGGCAACCTGCAGCATGTGTCATACACGCTC-AATCGGATTTAAGTC-CAGCGTGCGCGCTGGCCAGTCCATACGGACACTTGTCT---GCTG------CT--T-CACCACTC-TGGCGCGAAATG--GACTGGCATTATCATCC-ATCAGGT-TGA-TCTCAGACCCAACATCACCAGCG-TAGGGTCTGACGTACATGTATACATCGATGATATCATCCCGGTACCGC---ATCC--CAGCCATTGTTCATCTCTCCAAGACATGAGAATC----ATTCCAT-CACTGCTGATTCCA-CCCCAGACCATGATGGAATTGCCA-----C-TAA-A-ACTGCCATGTT-CAAT-GTTGTTGTAAT-AATGGACACGTTCACGTC-GTCGTTGCCACACTTGA-TGCCTCC--TGTCTGTAAAGTTCAAACAATACATGG---GT----TCATCAGTG--AACAGGACTTCAACGCAATCGTTCTGTGTCCAAATGACATGATATTTAGCCCAGTCCAATCGCTTCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAATATATGACCTTGTGGAGTTGAGATTTGCATTGTAAAGCAGATTTCGTAT-CTTCTGAGTGGACATATTCA-CCCCGAG-GCGTTTAGGAGGTCATTTTGTAGGCTGGTTGCTGTCCAAAAGG-GATGGCG-TCGTGTCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACAACCACCACCCCAT-GTCGG----TGAGCT-GCTGTTCC-AAAAGTTTGCTGTT-GGTTCCATGCCCTATTTACAA--CTCTGCCTGACGTTTAGCGC-ATTTGTAAAGTCA-GTTGTGAATGG-CCAGCGTCAAGCATT-CCAA-TACATCTGCC-C-AGTTGGTCTGTCGT-CAGGTGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATA-AACG-T-ATTGTAAACACTCAAATGAGTTT-AAAATGTTAGAAATAAGCAGAC-ACAGATGCCTGATTGAAAATTGTGCAATGGTAGCAAAAGTATCAA-CTGTG------CTGAGAAACGCACTATCCAT-GCCATGTTTTGCACGTGCCAGTTT-GTCAAAGACGTTTTCA--ATTTCACTTGGAC--AC-AACATAA-C--------CAGTTAT--------TAATTTATC----AAA-ACAAAAATGATCTATGATCTGGTAAAT-TACACACAT------CTAACC-TAGTG-ATCCTTATCAA
gi|3 : atACCACTCAAAATTTGAT----AAGGAT-CACTA--G---AT---TATATGTGTGCA-ATTTACCA-attttg
gi|6 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatcACTACTCAAAATTTGAT----AAGGAT-CACTC--G-GT-----TATATGTGTGTA-ATTTACCA-CTAACATTACAAAAGACA--TAAATTTGC-CTCAGAAACGTGTTTACTCA-GGTTAGTAATGAAAATTCATGAACGGC-ATGAACTTTTATCAATACGGAATGCTTG-AAATCAGACAACAACACCAAAAGGCATTTCATTACAAAAAAGTTAA-CAGCAAACCAGAGAAAGAA-TTACAC--A--GTTTTGGGGGATAGTCCATCATTACACTTACATGTTGTCGATGAA-GTGTCAATACAGGGTTTGGCCTCCCTTTG-CATCAATGACGGG-CTTGACAACGTCGAGCCATACTGTCAA-TAATCACCCGGGTGTTTCCAATGGGAAG-TTG-TTCCACTCTTCCATGAAGGTGTTTCAGAGCTCTATC-AAAGTTGT-TGATT-GTGCTCTACGGCGTGAAAGGGCAACCatatatggagttgtagcgtaacggaatatactgagctgactg
gi|13 : acACTACTCAAATTTTGAT----AAGGAT-CACTAC-G-TTTTATG-AGA-----GTA-ATTTACCA-CGAAAATAACACAAGACA--TAAATTTGA-CTCAGAAACTTGTTTACTCA-GGTTATGAATGAAAATTCATCAGCGGC-ATTAACTTTTATCAAAACGGAATGCTTG-AAATCTGATAACAACACCAAAAGGCATTTCATTAC-AAAAAGTTAA-CAGCAAGCAATAAAACGAA-TT--ACAAA--GTTTTGG
gi|10 : atACTACTCAAAATTTGATTTATAAGGAT-CACTA--GGTTATACATACATGTATGTGTGTTTACCA-CTAACATAACAAAAGACA--TAAATTTGA-CTCAAAAACGTATTTACTCA-GGTTATGAATGAAAATTCATGAACGGC-ATGAACTTTTATCAATACGGAATGCTTGCAAGTTTG
gi|10 : tatatACTACTCAAAATTTGAT----AAGGAT-CA-TA--G-tcgaagacgtttttgatttcacttggacataatattgctagttatacagttaataattttttattaaaacagaaaaagatctatgatccttatcaaattttgagtagtata
gi|11 : tatatactactcaaaatttgatttataaggatcactaggttatacatacatgtatgtgtgtttaccactaacataacaaaagacataaatttgactcaaaaacgtatttactcaggttatgaatgaaaattcatgaacggcatgaacttttatcaatacggaatgcttgcaagtttgtcgaagacgtttttgatttcacttggacataatattgctagttatacagttaataattttttattaaaacagaaaaagatACTACTCAAA-TTTGAT----AAGGATTCACTAAGG-TTATATGTGT-------TA-ATTTACCA-CTAATATTACAAAAGACA--TACATTTGCTCCCAGAAACGTGTTTACTCAAGGTTATGAATGAAAATTCATGAACGGCAATG-ACTTTTATCAAT-CGGAGTGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCATata
gi|21 : tttatACTACTCAAATTTTGAT----AAGGAT-CA-TA--G-ggacacaatattggcagttatgcagttattaatttttcaaatagacaaagatctatgatcctcatcaaattttgagtaatat
gi|15 : tgcagttattaattttttaaacagaaaaagatACTACTCAAAATTCGAT----AAGGAT-CACTAG-G-TTATATA---ATGTAata
gi|22 : ttttatatatACTACTCAAAATTTGAT----AAGGAT-CA-TA--G-actattatagaaaaggggatgcaaagaatttttttttttttttatgaacaaaaattcatcggcttaaa
gi|20 : ttaaacagaaaaagatCTACTCAAAATTTGAT----AAGGAT-CACTA--G-ata
gi|4 : tatgATTTAAAATTAGAT----AAGGAT-CACTA--G-GT---TATAAATG--TGTA-ATTTGCCAGCTCATATAgttngaacgtctacagcaaacttgtacgtgcatt
gi|2 : gacttgagcccaatcgttctatgtccaagtggcatgatctccaacccagtccaatcgctcccgccggtgtcgaacagtcaaagggactcgaacatatgcccttctggagttgagacctgcattgtgaagcagattccgtatccgtctgagtgaacacattcacccccgagacattcaagcggtcgctacgtaggctggttgctgtccagaagggatgacgtcgtgctgtaagagccacaaaatggccttggcattaagttgtcgacttctgacgaccacccccatgtcggtgtgctgctgtagcaaaagtttgctgccggttccaggccctgtttacattgctctagctgacgtttagtgcatttgtaacgtcacgttgtgaatggccagcgtcaagcattctaatacatctaccaagttgctctgtcgtcaggcaacgccttacacgttgagggggcattgtgttgataaacgtagtgtaaacactcaagtgagttcgaaattttagaaagaatcatacaccgacgcctgagggaaaatcgtgcaatggtagcaaaagcataaactgtgatgaaaaatgcatttcccatggcatgaaatgcacttgcaagtttgtaaaagacgcttttgatttcacttgaacacaatattgcctgttattttttgaaacagaaaaagaCAAAATTTGAT----AAGGAT-CACTA--G-GT-----TAGATGTGTGTA-ATTTACCA-
gi|18 : atactactcaaaatttgataaggatcactagattatatgtgtgtaatttaccactaacataacaaaaaacaaacaaattactcagaaaagtgtttagtcagggtatgaatcgacattcatgaacgtcatgaacttttatcaatacgagatgctacatttttcattacaaaaacttaacagctatccagagaaagaattacacagtttttggggatagtccatcattacacttagtcgatgaagtgtcaatgacgggtgtagcctcccctggcatcaatgacggcttgacaacctcgagcaatgctctcaatgagcacccggatgtttccaatgggaaggttgttccactcttccattagggcgtttccgagctctgccaaagtggtaggatgtgctgtacggcgtgagagggcaacctgcagcatgtgtcatacacgctcaatcggatttaagtccagcgtgcgcgctggccagtccatacggacacttgtctgctgcttcaccactctggcgcgaaatggactggcattatcatccatcaggttgatctcagacccaacatcaccagcgtagggtctgacgtacatgtatacatcgatgatatcatcccggtaccgcatcccagccattgttcatctctccaagacatgagaatcattccatcactgctgattccaccccagaccatgatggaattgccactaaaactgccatgttcaatgttgttgtaataatggacacgttcacgtcgtcgttgccacacttgatgcctcctgtctgtaaagttcaaacaatacatgggttcatcagtgaacaggacttcaacgcaatcgttctgtgtccaaatgacatgatatttagcccagtccaatcgcttccgccggtgtcgaacagtcagagggactcgaatatatgaccttgtggagttgagatttgcattgtaaagcagatttcgtatcttctgagtggacatattcaccccgaggcgtttaggaggtcattttgtaggctggttgctgtccaaaagggatggcgtcgtgtctgaagagccacaaaatggtcttggcgttgggttgtcgacctctgacaaccaccaccccatgtcggtgagctgctgttccaaaagtttgctgttggttccatgccctatttacaactctgcctgacgtttagcgcatttgtaaagtcagttgtgaatggccagcgtcaagcattccaatacatctgcccagttggtctgtcgtcaggtgacgccttacacgttgagggggcattgtgttgataaacgtattgtaaacactcaaatgagtttaaaatgttagaaataagcagacacagatgcctgattgaaaattgtgcaatggtagcaaaagtatcaactgtgctgagaaacgcactatccatgccatgttttgcacgtgccagtttgtcaaagacgttttcaatttcacttggacacaacataaccagttattaatttatcaaaacaaaaatgatctatgatcTCATGAACGGC-ATGAACTTTTATCAATACGCAATGCTTG-CAA
gi|17 : CGTTTCCGAGCTCTGCC-AAAGTCGT-GGATT-TTGCTCTACGGCGTGAAAAGCAAACCTGCAGCATGTTCTATACATGCTCAA-TCGGGTTCAAATCgtttttggtttcacttggacacaatgatgccagttatgcagttattaatttttaa
gi|7 : CCTGCAGCATGTTCCATACATGTTC-AATCGGGTT-AAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGAAAATTGTCTCCTGCTGAAGATATTGCTCCACCA-CCCTGGCGCGA--TGAAGACGGGCGTTATCA--CCATCA-GGATGACACTCAGGGCCA--AGCACCAGCATTAGAGTCTGACGTA-----A-ACATCGAGGATCTCAT--CGCTA-CGC---C-CC--CCGTCATTGTTCCCTTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTCCTGATTCCACCCC-AGACCATGATGGAACCACCA---CCA-TA----ACGGCCATG-TTCACTGGAT-TTGG-ATTCATGGAAACGTTCAAG--TGTCGTCGCCACACTGGG-Tcggca
gi|8 : ACTAGCG-TAGGGTCTGACGTA-----A-ACATCGAGGATCTCATTCCGGTACCGC----ACCCCCA-TCATTGTTCCTCTCTCCAGGACATGAATATCTGCTCTTCCAT-CCCTGGTGATTTCA-CCCCAGACCATGATGGAACCACCA---CCA-TA----ACGGTCATGTT-CACT-GATGTTGGCATCATTGGAAACGTTCACGTT-GTCGTTGCCACACTCAG-TGCCTCT--GGTCTGTAAAGTCCAAACAATACCTGA--A-----CTCATCGGTG--AACAGGACTTGAACTCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCTAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTAT-CGTCCGAGtgaggcacccagtgtggcgacgacaacttgaacgtttccattgtctgtaaagtccaaacgatacctgg
gi|3 : gtG-TTGAGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGCTACCGC----ACCCCCG-TCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCATCCCCTCCTGATTCCACCCC-AGACCATGA-TGAACCACCACCCACCATACGGAACGG-CATGTTCACTT-GATGTTGGCACCGATG
gi|5 : gTA-----A-ACATCGAGGATCTCATCCCGGTACCACATTCCCC-----TCATTGTTCCTCTCTCCAGGACATGAAAATCTGTTTTTCCAT-CCCTGCTGATTCCA-CCCCAGACCATGA---------TA-------TATCG----GTTATGTT-CACT-GATGTTGGCATCA-TGGAAACGTTCATGTC-GTCGTCGCCACACTCGG-TGCCTCC--TGTCTGTAAAGTCCAAACAATACCTGG--A-----CTCATCGGCG--AACAGGACTTGAACCCGATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACATATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTAT-CGTCTGAGTGG--ACATTCACCCCCGAG-GCGTTCAGAAGGTCGTTATGTAGGCTGGTTGTTGTCCAGAAGG-GATAGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGAGTTGTCGACCTCTGACGACCAT--CCCCAT-GTCGGTACCTATGCT-GCTGTTCC-AAACGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAACGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTTACGTTGTGAAT-AGCCAGCGTCAAACATTCCC-A-TACATCTGCC-C-AGTTGCTCTGTCGTGA-GGTGACGCCTTACACGTCGAGGGG-ACATTGTGTTGATA-AACG-T-AGTGTAAACACT----------------TTTTAGAAAGAATCagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatctggtaaattgcacacatataatctagtgatccttatcaaattttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|19 : GTCATTGTTCCTCTCTCCA-GACATGGAGATCTGTT-----AT-TTCGAC---------CCC-AAACCATGATGGAACCTCCG---CCA-TA----ACGGTCATA-TTCACT-GATg
gi|7 : cccCAATGGAAACGTTCAAGTT-GTCGTCGCCACACTGGG-TGCCTCt
gi|7 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttGTGTGGCGACGACA-ACTTGAACGTTTCCATTGTCTGTAAAGTCCAAACGATACCTGG--tctgtaaagtccaaacgatacctgg
gi|3 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttgaggcacccaCAATATCTGTTCACCGGACTCATCGGTGCCAACATCAAGTGAACAT-GCCGTTCCGTAT
gi|3 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccCGGTG--AACAGATATTGAACTCAATCGTTCTGTGTTC------CACGGT----GGCA--GTCCAATCGCTCCCGCCGGTGTCGAACAGTC--AGAGGGACTCGAACACATGCCTTTCTAGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTAT-CGTCTAAGTGGACACATTCACCCTCGAG-GTGTTCAGGGGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCGT-CATGCCTG-AAGAGCCACAAAATTGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCAC--CCTCAT-GTCGG----TGTGCT-GTTGTACC-AAAAGTTTTCTGTC-GGTTCCAGGTCCTGTTTACAATGCTCTGGTTGACGTTTAGTGC-ATTTGCAACGTCATGTTGTGAAT-AGCCAGCGTCAAGCATT-CTAA-TACATCTGCC-C-AGTTGCTCTGTCGT-CAGGCGACGCCTTACACGTTGA-GGG-GCATTGTGTT-AATAAATG-T-AGTGTAAACACTCAAGTGAATTT-GAAATTTTAGAAAGAATCAGACACCG-ATGCCTGAATGAAAATCGTGCAATTGTAGCAAAAGCATAAA-CTGTG------ATGAGAAACGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTT-GTCGAAAACGTTTTTG--ATTT-ACTTGGACTTACTAGTA-TG----------CAGTTAT--------TACTTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAAT-TGCACACAT------ATAATC-TAGTG-ATCCTTATCAAaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatctggtaaattgcacacatataatctagtgatccttatcaaattttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtcGACTTGAGCCCAATCGTTCTATGTCCAAGTGGCATGATCTCCAACCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTC--AAAGGGACTCGAACATATGCCCTTCTGGAGTTGAGACCTGCATTGTGAAGCAGATTCCGTATCCGTCTGAGTGAACACATTCACCCCCGAG-ACATTCAAGCGGTCGCTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGACG-TCGTG-CTGTAAGAGCCACAAAATGGCCTTGGCATTAAGTTGTCGACTTCTGACGACCAC--CCCCAT-GTCGG----TGTGCT-GCTGTAGC-AAAAGTTTGCTGCC-GGTTCCAGGCCCTGTTTACATTGCTCTAGCTGACGTTTAGTGC-ATTTGTAACGTCACGTTGTGAATGG-CCAGCGTCAAGCATT-CTAA-TACATCTA-C-CAAGTTGCTCTGTCGT-CAGGCAACGCCTTACACGTTGAGGGG-GCATTGTGTTGATA-AACG-T-AGTGTAAACACTCAAGTGAGTTC-GAAATTTTAGAAAGAATCATACACCG-ACGCCTGAGGGAAAATCGTGCAATGGTAGCAAAAGCATAAA-CTGTG------ATGAAAAATGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTT-GTAAAAGACGCTTTTG--ATTTCACTTGAAC--AC-AATATTG-C--------CTGTTAT-----------TTTTTG----AAACAGAAAAA-GATATATGAGCTGGCAAAT-TACACATTT------ATAACC-TAGTG-ATCCTTATCattttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|14 : TGTGAAGCCGATTCCGTAT-CGTTTGAATGGACACATTCTTCCAAGGG-GCATTCAGGAGGTCGTTACGTAGGCTGGTTGGTGTCCAGAAGGTTATGGTG-TGGTGCCTG-AAGAGCCAAACAAGGGTATGGGCGTTTGGTTGTCGACCTCTAACGAACAC--ACCCTTGGTCGG----TGTGCTGGCTGAACC-AAAATTTTATTGTCGGGTTGCAGGCCTTGTTTACAAtaattttaaat
gi|9 : CTGGTTGCTGTCCAGAAGG-GATGGCGT-CGTGCATG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGGCGACCTTTGACGATCCT--CTCCAT-GTCGG----TGTGCA-GTTGTACC-AAAAGTTTGTTTTC-GGTTCCAGGCCCTGTTTACTATGCTCTGGCTGACGTTTAGTTTAG----------CACGCTGTGAAT-AGCCAGCGTCAAGCATT-CCAA-TACATCTT-CTC-TGTTGCTTTGTCCT-CAGGCGACGCCTTACATTTTGAGGGGAGCAGTGTCTTGATA-AACG-T-AGTGGAAACACTCAAGTGAGTTT-CAAATTTTAAAAAGAATGAG
gi|12 : CAGCGTCAAGCATT-CC-AATACATCTG-C-CCATTTGCTCTGTCGT-CAGGTAACGTCTTACACGTTGAGGGG-GTATT-TGTTGATA-AACGTACAGTATAAACACTCAAGTGAGTTTAGAGATTTTAGAAAGAATCAGACACCG-ATGCCCGAGTGAAAATCGCGCAATGGTAGCAAAAGCAT-AAACTGTGCACATGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTACAAGTTT-GCTGTAGACGTTa
gi|16 : CATCTCCAATCAATACAGAATGC--TTGCAAG-TTTGTCGAAGACATTTTTTTTATTTCACTTGGAC--AC-AATATTA-C--------CAGTTAT--------
gi|10 : aaagaaaattcaaaatttcaaaatggcagtaaACGGAATGC--TTGCAAG-TTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AT-AATATTG-C--------TAGTTATACAGTTAATAATTTTTTATTAAAACAGAAAAA-GATCTATGATC
gi|20 : tatatactactcaaaatttgatttataaggatcactaggttatacatacatgtatgtgtgtttaccactaacataacaaaagacataaatttgactcaaaaacgtatttactcaggttatgaatgaaaattcatgaacggcatgaacttttatcaatAATGCACGTACAAGTTT-GCTGTAGACGTTcttatcaaattttgagtagtata
gi|18 : tatgctactcaaaatttgataaggatcactaggttngGTTTTTG--GTTTCACTTGGAC--AC-AATGATG-CCAGTTATGCAGTTAT--------TAATTTTT
gi|11 : tcatgaacggcatgaacttttatcaatacgcaatgcttgcaa--ATTTCA--TGGAC--AC-AATATTGGCAGTTATG-CAGTTAT--------TAATTTTTC----AAATAGACAAA-GATCTATGATCaa
gi|21 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggc--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCctcatcaaattttgagtaatat
gi|22 : tgTT----AAACAGAAAAA-GATCTATGATCcttatcaaaatttgagtagtata
gi|15 : TCTATAAT------AGT-TACAT-TAT------ATAACC-TAGTG-ATCCTTATCGActtatcaaattttgagtagtata
gi|2 : ttttatatatactactcaaaatTGGTAAAT-TACACACAT------ATAATC-TAGTG-ATCCTTATCAAaaaggggatgcaaagaatttttttttttttttatgaacaaaaattcatcggcttaaa
gi|6 : atactactcaaaatTGGTAAAT-TACACACAT------ATAACC-GAGTG-ATCCTTATCAActaacataacaaaaaacaaacaaattactcagaaaagtgtttagtcagggtatgaatcgacattcatgaacgtcatgaacttttatcaatacgagatgctacatttttcattacaaaaacttaacagctatccagagaaagaattacacagtttttggggatagtccatcattacacttagtcgatgaagtgtcaatgacgggtgtagcctcccctggcatcaatgacggcttgacaacctcgagcaatgctctcaatgagcacccggatgtttccaatgggaaggttgttccactcttccattagggcgtttccgagctctgccaaagtggtaggatgtgctgtacggcgtgagagggcaacctgcagcatgtgtcatacacgctcaatcggatttaagtccagcgtgcgcgctggccagtccatacggacacttgtctgctgcttcaccactctggcgcgaaatggactggcattatcatccatcaggttgatctcagacccaacatcaccagcgtagggtctgacgtacatgtatacatcgatgatatcatcccggtaccgcatcccagccattgttcatctctccaagacatgagaatcattccatcactgctgattccaccccagaccatgatggaattgccactaaaactgccatgttcaatgttgttgtaataatggacacgttcacgtcgtcgttgccacacttgatgcctcctgtctgtaaagttcaaacaatacatgggttcatcagtgaacaggacttcaacgcaatcgttctgtgtccaaatgacatgatatttagcccagtccaatcgcttccgccggtgtcgaacagtcagagggactcgaatatatgaccttgtggagttgagatttgcattgtaaagcagatttcgtatcttctgagtggacatattcaccccgaggcgtttaggaggtcattttgtaggctggttgctgtccaaaagggatggcgtcgtgtctgaagagccacaaaatggtcttggcgttgggttgtcgacctctgacaaccaccaccccatgtcggtgagctgctgttccaaaagtttgctgttggttccatgccctatttacaactctgcctgacgtttagcgcatttgtaaagtcagttgtgaatggccagcgtcaagcattccaatacatctgcccagttggtctgtcgtcaggtgacgccttacacgttgagggggcattgtgttgataaacgtattgtaaacactcaaatgagtttaaaatgttagaaataagcagacacagatgcctgattgaaaattgtgcaatggtagcaaaagtatcaactgtgctgagaaacgcactatccatgccatgttttgcacgtgccagtttgtcaaagacgttttcaatttcacttggacacaacataaccagttattaatttatcaaaacaaaaatgatctatgatctggtaaattacacacatctaacctagtgatccttatcaaattttg
gi|13 : acactactcaaaatTGGTAAAT-TACTCTCAT------AAAACG-TAGTG-ATCCTTATCAActaacattacaaaagacataaatttgcctcagaaacgtgtttactcaggttagtaatgaaaattcatgaacggcatgaacttttatcaatacggaatgcttgaaatcagacaacaacaccaaaaggcatttcattacaaaaaagttaacagcaaaccagagaaagaattacacagttttgggggatagtccatcattacacttacatgttgtcgatgaagtgtcaatacagggtttggcctccctttgcatcaatgacgggcttgacaacgtcgagccatactgtcaataatcacccgggtgtttccaatgggaagttgttccactcttccatgaaggtgtttcagagctctatcaaagttgttgattgtgctctacggcgtgaaagggcaacc
gi|10 : atactactcaaattTGGTAAACACACATACATGTATGTATAACC-TAGTG-ATCCTTATAAAcgaaaataacacaagacataaatttgactcagaaacttgtttactcaggttatgaatgaaaattcatcagcggcattaacttttatcaaaacggaatgcttgaaatctgataacaacaccaaaaggcatttcattacaaaaagttaacagcaagcaataaaacgaattacaaagttttgg
gi|11 : tatatactactcaaaatttgaTGGTAAAT-TA-ACACAT------ATAACCTTAGTGAATCCTTATCAActaacataacaaaagacataaatttgactcaaaaacgtatttactcaggttatgaatgaaaattcatgaacggcatgaacttttatcaatacggaatgcttgcaagtttgtcgaagacgtttttgatttcacttggacataatattgctagttatacagttaataattttttattaaaacagaaaaagatctatgatccttatcaaattttgagtagtata
gi|20 : tttatactactcaaatAACC-TAGTG-ATCCTTATCAActaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcatttcatggacacaatattggcagttatgcagttattaatttttcaaatagacaaagatctatgatcctcatcaaattttgagtaatat
Alignments
lowQualScore : 22222222222 1 11 11111 555555 333 3333 333 333 2 1 1 111 1 2 22 1 22 22 11111 11 2222 11 3333 111 444444 2222 1111 33 222222 3333333333 11111111 1111
lowQualScore : 6666 2 4 2 99 44444444444 3 4 4 0 99 6 6 5 5 888 0 5 0 8 8 3 1 3 33 88888 888888 000 6 222 1 0000 666 1 1 1 000 0 1 0 3 7 7 1 6 0 0 0 3 2 3 6 0 1 1 1 777 4 2 3 22 7 1 2 6 11 44 1 6 1 8 66666 6 66 0000 3 5 3 77 22 7777 2 555 5 5 2 1 1 6 6 1 999999 1 2 9999 5 1 2 6 5 5 0 5 77 5 2222 5 5 5 1 6 3 1 44 1 5 77 5 0 5 333333 6 1 7 1 66 66 5 0 1111111111 66666666 0000 5 0
lowQualScore : .... . . . .. ........... . . . . .. . . . . ... . . . . . . . . .. ..... ...... ... . ... . .... ... . . . ... . . . . . . . . . . . . . . . . . . . ... . . . .. . . . . .. .. . . . . ..... . .. .... . . . .. .. .... . ... . . . . . . . . ...... . . .... . . . . . . . . .. . .... . . . . . . . .. . . .. . . . ...... . . . . .. .. . . .......... ........ .... . .
lowQualScore : 1111 9 3 9 66 33333333333 2 4 4 1 22 7 7 0 0 888 0 7 8 0 0 8 0 2 88 55555 000000 000 7 777 0 3333 777 0 0 0 000 7 0 7 3 3 3 0 5 2 2 0 2 0 2 5 0 0 0 0 333 0 0 3 77 3 0 3 7 33 33 0 7 0 0 77777 7 00 4444 0 7 0 99 00 4444 3 000 7 7 5 7 0 7 3 0 000000 0 5 0000 7 0 5 7 7 7 7 7 99 7 1111 7 7 7 7 7 7 0 77 4 7 99 7 8 6 000000 7 0 3 7 99 99 0 4 8888888888 11111111 6666 0 8
consensus : ACTACTCAAAATTTGAT----AAGGAT-CACT-A--G-TTATATATATATGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TAAATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATG-AAGTGTCAATACCGGGTNTGGCCTCCCTTT-GCATCAATGAC-G-GCTTGACAACGTCGAGCCATGCTGTC-AATAAGCACCCGGATGTTTCCAATGGGAA-GTTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATT-GTGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGTCTCC-GCTGAAGGTACTGCTCCACCACCC-TGGCGCGA-ATGAAGACGGGCGTTATCACCCCATCAGG-ATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGC-NCCCCCGGTCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCATA----ACGGTCATGTTTCAC-T-GATGTTGGCATCAATGGAAACGTTCACG-TCGTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA----C-TCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTCTCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAAT-AGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
Reference ( family-2211 ) : ACTACTCAAAATTTGAT----AAGGAT-CACT-A--G-TTATATATANATGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TAAATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTACATGTTGTCGATGAAAGTGTCAATGNNGGGTNTGGCCTCCCTCTGGCATCAATGACGGGGCTTGACAACNTCGAGCNATGCTNTCAAATGANCACCCGGGTGTTTCCAATGGGAAGGTTGTTTCCACTCTTCCATNAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATT-GTGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACACGCTCAATCGGGTTCAAGTC-CGGCGNGCGCGCTGGCCAGTCCATACGGANANTTGTCTCCTGCTGAAGATACTGCTCCACCACCCCTGGCGCGAAATGAAGACNGGCGTTATCATCCCATCAGGNATGACNCTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGCCNCCCCCGGTCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCG-CCACCATA---GACGGTCATGTTTCAC-T-GATGTTGGCATCAATGGAAACGTTCACG-TCGTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA----CCTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTCTCAGAGGGACTCGAACATATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATGAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
gi|1 : ACTACTCAAAATTTGAT----AAGGAT-CACT-A--G-TTATATATATATGTATGTA-ATTTACCA-CTAACATAACAAAATCCA--TAATTTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAAAT-CATGAACGAC-ATGAACGTTT---ATTAATACGGAATGCTTG-AAATCTGAT-ACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTT-ACAGCAATCCAGAGAAAG-ATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATG--AGT-TCAATACCGGGTATGGCCTCCCTT--GCATCAATGAC---GCTTGACAACGTCGATCCATGCTGTC--ATAAGCACCCGAATGTTTCCAATGGGAA-GTTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTG-CAAAGTCGTGGATTGGTGCTCTACGGCGTGAAAGGGCAACCTGC-GCATGTTCCATACATGCTC-ATCGGGTTCAAGTCGCAGCGAACGCGCTGGCCAGTCCATACGGACAATTGTCCTCGGCTGAAGGTACTGCT-CACCACCCCTGGCGTG--ATGAAGAAGGGCGATATCACCCCATCAGGGATGA-ACTCAGGACCAACAACACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGCCACCATCGGTCAATGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTACTGATTCCA-CCCAGACCATGA-GGA--ACCA-CCAACCTACC-GACGGTCATGTTTCTC-T-GATGTTGGCATCAATGGAAACGTTCACGTTTGTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGAGTGGACTCATCGGTGAACAGGACTTGAACACAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCC--ATCCAATCGCTCTCGCCGGTGTCGAACAGTTTTAGAGGGACTCAAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAGCGCGTTCAGGAGGTCGTTATGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCGTTCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACCAAAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGCAATGTGCAACGTCACGCTGTGAAT--ACCAGCGTCAAGCATTCC-ATACATCTG-CCAGTTGCTCTGTCGTC-GGCAACGCCTTA-ACGTTGAGGGG-GCGTTGTGTTGAATAGCGAA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGGC-CCAATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAACAT-AACTG------TGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTGCAAG-TTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
gi|10 : ACTACTCAAAATTTGATTTATAAGGAT-CACT-A--GGTTATACATACATGTATGTGTGTTTACCA-CTAACATAACAAAAGACA--TAAATTTGA-CTCAAAAACGTATTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTGCAAGTTTG
gi|10 : tatatACGGAATGC--TTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AT-AATATTG-C--------TAGTTATACAGTTAATAATTTTTTATTAAAACAGAAAAA-GATCTATGATCtcgaagacgtttttgatttcacttggacataatattgctagttatacagttaataattttttattaaaacagaaaaagatctatgatccttatcaaattttgagtagtata
gi|10 : tatatactactcaaaatttgatttataaggatcactaggttatacatacatgtatgtgtgtttaccactaacataacaaaagacataaatttgactcaaaaacgtatttactcaggttatgaatgaaaattcatgaacggcatgaacttttatcaatACTACTCAAAATTTGAT----AAGGAT-CA-T-A--G-cttatcaaattttgagtagtata
gi|11 : tatatactactcaaaatttgatttataaggatcactaggttatacatacatgtatgtgtgtttaccactaacataacaaaagacataaatttgactcaaaaacgtatttactcaggttatgaatgaaaattcatgaacggcatgaacttttatcaatacggaatgcttgcaagtttgtcgaagacgtttttgatttcacttggacataatattgctagttatacagttaataattttttattaaaacagaaaaagatACTACTCAAA-TTTGAT----AAGGATTCACT-AAGG-TTATAT------GTGT-TA-ATTTACCA-CTAATATTACAAAAGACA--TACATTTGCTCCCAGAAACGTGTTTACTCAAGGTTATGAATGAAAATT-CATGAACGGCAATG-ACTTTT---ATCAAT-CGGAGTGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCATGGAC-ACAATATTGGCAGata
gi|11 : tttat--ATTTCA--TGGAC--AC-AATATTGGCAGTTATG-CAGTTAT--------TAATTTTTC----AAATAGACAAA-GATCTATGATCttatgcagttattaatttttcaaatagacaaagatctatgatcctcatcaaattttgagtaatat
gi|11 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcATTACTCAAAATTTGAT----GAGGAT-CA-T-A--G-ATCTTTGTCTATTTGAAAA-ATTAATAA-CT-GCATAACctcatcaaattttgagtaatat
gi|12 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcatttcatggacacaatattggcaCAGCGTCAAGCATTCCAATACATCTGCCCATTTGCTCTGTCGTCAGGTAACGTCTTACACGTTGAGGGG-GTATT-TGTTGATAAACGTACAGTATAAACACTCAAGTGAGTTTAGAGATTTTAGAAAGAATCAGACACCGATGCCCGAGTGAAAATCGCGCAATGGTAGCAAAAGCATAAACTGTGCACATGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTACAAGTTTGCTGTAGACGTTat
gi|13 : ACTACTCAAATTTTGAT----AAGGAT-CACT-AC-G-TTTTATG-AGA-----GTA-ATTTACCA-CGAAAATAACACAAGACA--TAAATTTGA-CTCAGAAACTTGTTTACTCA-GGTTATGAATGAAAATT-CATCAGCGGC-ATTAACTTTT---ATCAAAACGGAATGCTTG-AAATCTGATAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAAGCAATAAAACGAATT--ACAAA--GTTTTGG
gi|14 : atTGTGAAGCCGATTCCGTATC-GTTTGAATGGACACATTCTTCCAAGGG-GCATTCAGGAGGTCGTTACGTAGGCTGGTTGGTGTCCAGAAGGTTATGGTG-TGGTGCCTG-AAGAGCCAAACAAGGGTATGGGCGTTTGGTTGTCGACCTCTAACGAACACA--CCCTTGGTCGG----TGTGCTGGCTGAACC-AAAATTTTATTGTCGGGTTGCAGGCCTTGTTTACAA
gi|15 : ACTACTCAAAATTCGAT----AAGGAT-CACT-AG-G-TTATATA---ATGT
gi|15 : ttttatatatTCTATAAT------AGTTACAT-TATATAACCTAGTGATCCTTATCGAaactattatagaaaaggggatgcaaagaatttttttttttttttatgaacaaaaattcatcggcttaaa
gi|16 : ttttatatatactactcaaaatAAAATTTCA-AAATGGC-AGTAACATCTCCAATCAATACAGAATGCTTGCAAGTTTGTCGAAGACAaaaggggatgcaaagaatttttttttttttttatgaacaaaaattcatcggcttaaa
gi|16 : aaagaaaattcCATCTCCAATCAATACAGAATGC--TTGCAAGTTTGTCGAAGACATTTTTTTTATTTCACTTGGAC--AC-AATATTA-C--------CAGTTAT--------ttttttttatttcacttggacacaatattaccagttat
gi|17 : aaagaaaattcaaaatttcaaaatggcagtaaCGTTTCCGAGCTCTGCCAAAGTCGTGGATT-TTGCTCTACGGCGTGAAAAGCAAACCTGCAGCATGTTCTATACATGCTCAATCGGGTTCAAATC-CGGC
gi|18 : T-CATGAACGGC-ATGAACTTTT---ATCAATACGCAATGCTTG-CAAa
gi|18 : ACGCAATGC--TTGCAAGTTT-------------TTG--GTTTCACTTGGAC--AC-AATGATG-CCAGTTATGCAGTTAT--------TAATTTTTgtttttggtttcacttggacacaatgatgccagttatgcagttattaatttttaa
gi|19 : tcatgaacggcatgaacttttatcaatCCCGTCATTGTTCCTCTCTCCAG-ACATGGAGATCTGTT-----AT----------TTCGACCCCAAACCATGATGGA--ACCT-CCGCCATA----ACGGTCATA-TTCAC-T-GATaa
gi|2 : ACTACTCAAAATTTGAT----AAGGAT-CACT-A--G-----AT-TATATGTGTGTA-ATTTACCA-CTAACATAACAAAAAACAAACAAATT--A-CTCAGAAAAGTGTTTAGTCA-GGGTATGAATCGACATT-CATGAACGTC-ATGAACTTTT---ATCAATACGAGATGCT----------------ACATT--------TTTCAT-TAC-AAAAACTTAACAGCTATCCAGAGAAAGAATT--AC--ACAGTTTTTGGGGATAGTCCATCATTACACTTA------GTCGATGAA-GTGTCAATGACGGGTGTAGCCTCCC-CTGGCATCAATGACGG--CTTGACAACCTCGAGCAATGCTCTCAA-TGAGCACCCGGATGTTTCCAATGGGAAGGTTGTT-CCACTCTTCCATTAGGGCGTTTCCGAGCTCTGCCAAAGTGGTAGGAT-GTGCTGTACGGCGTGAGAGGGCAACCTGCAGCATGTGTCATACACGCTCAATCGGATTTAAGTC-CAGCGTGCGCGCTGGCCAGTCCATACGGACACTTGTCT------------GCTGCTTCACCACTC-TGGCGCGAAATG--GACTGGCATTATCATCC-ATCAGGT-TGA-TCTCAGACCCAACATCACCAGCGT-AGGGTCTGACGTACATGTATACATCGATGATATCATCCCGGTACCGCATCCC--AGCCATTGTTCATCTCTCCAAGACATGAGAATC----ATTCCAT-CACTGCTGATTCCACCCCAGACCATGATGGA--ATTG-CCACTA-A---AACTGCCATGTT-CAA-T-GTTGTTGTAAT-AATGGACACGTTCACG-TCGTCGTTGCCACACTTGATGCCTCCTGTCTGTAAAGTTCAAACAATACATGGG----T-TCATCAGTGAACAGGACTTCAACGCAATCGTTCTGTGTCCAAATGACATGATATTTAGCCCAGTCCAATCGCTTCCGCCGGTGTCGAACAGTC--AGAGGGACTCGAATATATGACCTTGTGGAGTTGAGATTTGCATTGTAAAGCAGATTTCGTATC-TTCTGAGTGGACATATTCACCCC-GAG-GCGTTTAGGAGGTCATTTTGTAGGCTGGTTGCTGTCCAAAAGG-GATGGCG-TCGTGTCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACAACCACCACCCCAT-GTCGG----TGAGCT-GCTGTTCC-AAAAGTTTGCTGTT-GGTTCCATGCCCTATTTACAA--CTCTGCCTGACGTTTAGCGC-ATTTGTAAAGTCA-GTTGTGAATG-GCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGGTCTGTCGTCAGGTGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--TTGTAAACACTCAAATGAGTTT-AAAATGTTAGAAATAAGCAGACACAGATGCCTGATTGAAAATTGTGCAATGGTAGCAAAAGTATCAACTG------TGCTGAGAAACGCACTATCCAT-GCCATGTTTTGCACGTGCCAGTTTGTCAAAGACGTTTTCA--ATTTCACTTGGAC--AC-AACATAA-C--------CAGTTAT--------TAATTTATC----AAA-ACAAAAATGATCTATGATCTGGTAAATTACACACATCTAACCTAGTGATCCTTATCAAt
gi|20 : atCTACTCAAAATTTGAT----AAGGAT-CACT-A--G-attttg
gi|20 : tatgAATGCACGTACAAGTTTGCTGTAGACGTTgttngaacgtctacagcaaacttgtacgtgcatt
gi|21 : tatgctactcaaaatttgataaggatcactaggttng--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATC
gi|21 : tgACTACTCAAATTTTGAT----AAGGAT-CA-T-A--G-cttatcaaaatttgagtagtata
gi|22 : tgcagttattaattttttaaacagaaaaagatTT----AAACAGAAAAA-GATCTATGATCata
gi|22 : ACTACTCAAAATTTGAT----AAGGAT-CA-T-A--G-cttatcaaattttgagtagtata
gi|3 : ttaaacagaaaaagatGT-TGAGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGCTACCGC-ACCCCCG-TCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCATCCCCTCCTGATTCCACCCCAGACCATGATGAACCACCACCCACCATACGGAACGG-CATG-TTCACTT-GATGTTGGCACCGATGata
gi|3 : gCGGTGAACAGATATTGAACTCAATCGTTCTGTGTTC------CACGGT----GG--CAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGCCTTTCTAGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTAAGTGGACACATTCACCCTCGAG-GTGTTCAGGGGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCATGCCTG-AAGAGCCACAAAATTGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CTCAT-GTCGG----TGTGCT-GTTGTACC-AAAAGTTTTCTGTC-GGTTCCAGGTCCTGTTTACAATGCTCTGGTTGACGTTTAGTGC-ATTTGCAACGTCATGTTGTGAAT-AGCCAGCGTCAAGCATTCTAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGA-GGG-GCATTGTGTTAATAAATGTA--GTGTAAACACTCAAGTGAATTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAATGAAAATCGTGCAATTGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTTGTCGAAAACGTTTTTG--ATTT-ACTTGGACTTACTAGTA-TG----------CAGTTAT--------TACTTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTGCACACATATAATCTAGTGATCCTTATCAAagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatctggtaaattgcacacatataatctagtgatccttatcaaattttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|3 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtcACCACTCAAAATTTGAT----AAGGAT-CACT-A--G---AT---TATATGTGTGCA-ATTTACCA-attttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatcGACTTGAGCCCAATCGTTCTATGTCCAAGTGGCATGATCTCCAACCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTC--AAAGGGACTCGAACATATGCCCTTCTGGAGTTGAGACCTGCATTGTGAAGCAGATTCCGTATCCGTCTGAGTGAACACATTCACCCCCGAG-ACATTCAAGCGGTCGCTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGACG-TCGTGC-TGTAAGAGCCACAAAATGGCCTTGGCATTAAGTTGTCGACTTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTAGC-AAAAGTTTGCTGCC-GGTTCCAGGCCCTGTTTACATTGCTCTAGCTGACGTTTAGTGC-ATTTGTAACGTCACGTTGTGAATG-GCCAGCGTCAAGCATTCTAATACATCTACCAAGTTGCTCTGTCGTCAGGCAACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTC-GAAATTTTAGAAAGAATCATACACCGACGCCTGAGGGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAAAAATGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTTGTAAAAGACGCTTTTG--ATTTCACTTGAAC--AC-AATATTG-C--------CTGTTAT-----------TTTTTG----AAACAGAAAAA-GATATATGAGCTGGCAAATTACACATTTATAACCTAGTGATCCTTATCatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ATTTAAAATTAGAT----AAGGAT-CACT-A--G-GT---TATAAA--TGTGTA-ATTTGCCAGCTCATATAtaattttaaat
gi|5 : gacttgagcccaatcgttctatgtccaagtggcatgatctccaacccagtccaatcgctcccgccggtgtcgaacagtcaaagggactcgaacatatgcccttctggagttgagacctgcattgtgaagcagattccgtatccgtctgagtgaacacattcacccccgagacattcaagcggtcgctacgtaggctggttgctgtccagaagggatgacgtcgtgctgtaagagccacaaaatggccttggcattaagttgtcgacttctgacgaccacccccatgtcggtgtgctgctgtagcaaaagtttgctgccggttccaggccctgtttacattgctctagctgacgtttagtgcatttgtaacgtcacgttgtgaatggccagcgtcaagcattctaatacatctaccaagttgctctgtcgtcaggcaacgccttacacgttgagggggcattgtgttgataaacgtagtgtaaacactcaagtgagttcgaaattttagaaagaatcatacaccgacgcctgagggaaaatcgtgcaatggtagcaaaagcataaactgtgatgaaaaatgcatttcccatggcatgaaatgcacttgcaagtttgtaaaagacgcttttgatttcacttgaacacaatattgcctgttattttttgaaacagaaaaagaTA-----A-ACATCGAGGATCTCATCCCGGTACCACATTCCCC--TCATTGTTCCTCTCTCCAGGACATGAAAATCTGTTTTTCCAT-CCCTGCTGATTCCACCCCAGACCATGAT---------------ATA---T-CGGTTATGTT-CAC-T-GATGTTGGCATCA-TGGAAACGTTCATG-TCGTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA----C-TCATCGGCGAACAGGACTTGAACCCGATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTC--AGAGGGACTCGAACATATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACA--TTCACCCCCGAG-GCGTTCAGAAGGTCGTTATGTAGGCTGGTTGTTGTCCAGAAGG-GATAGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGAGTTGTCGACCTCTGACGACCATC--CCCAT-GTCGGTACCTATGCT-GCTGTTCC-AAACGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAACGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTTACGTTGTGAAT-AGCCAGCGTCAAACATTCCCATACATCTGCCCAGTTGCTCTGTCGTGAGGTGACGCCTTACACGTCGAGGGG-ACATTGTGTTGATAAACGTA--GTGTAAACACT----------------TTTTAGAAAGAATC
gi|6 : ACTACTCAAAATTTGAT----AAGGAT-CACTCG--G-TTATA------TGTGTGTA-ATTTACCA-CTAACATTACAAAAGACA--TAAATTTGC-CTCAGAAACGTGTTTACTCA-GGTTAGTAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCAGACAACAACACCAAAAGGCATTTCAT-TACAAAAAAGTTAACAGCAAACCAGAGAAAGAATTACAC--A--GTTTTGGGGGATAGTCCATCATTACACTTACATGTTGTCGATG-AAGTGTCAATACAGGGTTTGGCCTCCCTTT-GCATCAATGAC-GGGCTTGACAACGTCGAGCCATACTGTC-AATAATCACCCGGGTGTTTCCAATGGGAA-GTTG-TTCCACTCTTCCATGAAGGTGTTTCAGAGCTCTATCAAAGTTGTTGATT-GTGCTCTACGGCGTGAAAGGGCAACCg
gi|7 : acCCTGCAGCATGTTCCATACATGTTCAATCGGGTT-AAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGAAAATTGTCTCCTGCTGAAGATATTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCA--CCATCAGG-ATGACACTCAGGGCCAA--GCACCAGCATTAGAGTCTGACGTA-----A-ACATCGAGGATCTCATCGC--TAC-GCCCCCC---GTCATTGTTCCCTTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTCCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCATA----ACGGCCATG-TTCAC-TGGAT-TTGG-ATTCATGGAAACGTTCAAG-T-GTCGTCGCCACACTGGGT
gi|7 : CAATGGAAACGTTCAAG-TTGTCGTCGCCACACTGGGTGCCTCtgaggcacccagtgtggcgacgacaacttgaacgtttccattgtctgtaaagtccaaacgatacctgg
gi|7 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttTGTCTGTAAAGTCCAAACGATACCTGGtctgtaaagtccaaacgatacctgg
gi|8 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttgaggcacccagtgtggcgacgacaacttgaacgtttccatACTAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATTCCGGTACCGC-ACCCCCA-TCATTGTTCCTCTCTCCAGGACATGAATATCTGCTCTTCCAT-CCCTGGTGATTTCACCCCAGACCATGATGGA--ACCA-CCACCATA----ACGGTCATGTT-CAC-T-GATGTTGGCATCATTGGAAACGTTCACG-TTGTCGTTGCCACACTCAGTGCCTCTGGTCTGTAAAGTCCAAACAATACCTGAA----C-TCATCGGTGAACAGGACTTGAACTCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCTAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCCGAG
gi|9 : gtCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCATG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGGCGACCTTTGACGATCCTC--TCCAT-GTCGG----TGTGCA-GTTGTACC-AAAAGTTTGTTTTC-GGTTCCAGGCCCTGTTTACTATGCTCTGGCTGACGTTTAGT----TTAG------CACGCTGTGAAT-AGCCAGCGTCAAGCATTCCAATACATCTTCTCTGTTGCTTTGTCCTCAGGCGACGCCTTACATTTTGAGGGGAGCAGTGTCTTGATAAACGTA--GTGGAAACACTCAAGTGAGTTT-CAAATTTTAAAAAGAATGAGA
Alignments
lowQualScore : 3333333333333 1 11 11111 333333 1 22 1 1 1 1 222 1 1 222 22 1 1 11111 222 11111111 111 22222 2222 1111 222222 3333333333 11111111 1111
lowQualScore : 6666 3 1 9999999999999 4 4 0 99 6 6 5 5 888 0 5 0 8 8 3 1 3 33 88888 888888 7 6 1 2 00 7 3 7 7 0 6 0 0 0 3 3 6 0 3 666 3 2 3 888 7 11 3 3 1 6 1 8 66666 6 6 1 6 111 3 5 3 77 66 33333333 2 555 5 5 2 1 1 6 6 1 00000 1 2 9999 5 2 6 5 5 5 77 5 2222 5 5 5 1 6 3 1 1 5 77 5 0 5 333333 6 1 7 1 66 66 5 0 1111111111 66666666 0000 5 0
lowQualScore : .... . . ............. . . . .. . . . . ... . . . . . . . . .. ..... ...... . . . . .. . . . . . . . . . . . . . . ... . . . ... . .. . . . . . . ..... . . . . ... . . . .. .. ........ . ... . . . . . . . . ..... . . .... . . . . . . .. . .... . . . . . . . . . .. . . . ...... . . . . .. .. . . .......... ........ .... . .
lowQualScore : 5555 1 5 7777777777777 4 4 1 22 7 7 0 0 888 0 7 8 0 0 8 0 2 88 55555 333333 3 7 0 3 00 3 3 3 3 7 5 2 2 0 2 2 5 0 3 777 7 0 3 000 3 77 3 3 0 7 0 0 77777 7 7 0 7 000 0 7 0 99 00 11111111 3 000 7 7 5 7 0 7 3 0 00000 0 5 0000 7 5 7 7 7 7 99 7 1111 7 7 7 7 7 7 0 4 7 99 7 8 6 000000 7 0 3 7 99 99 0 4 8888888888 11111111 6666 0 8
consensus : ACTACTCAAAATTTGAT----AAGGAT-CACTA--G-TTATAT-TATATGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TAAATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATACCGGGTNTGGCCTCCCCTTGCATCAATGAC-GGCTTGACAACGTCGAGCCATGCTGTCAATAAGCACCCGGATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATT-GTGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGT-CTC--GCTGAAGGTACTGCTCCACCA-CCCTGGCGCGAA-TGAAGACGGGCGTTATCACCC-ATCA-GGATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCG-CAC-CCCCGGTCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTTTCAC-T-GATGTTGGCATCAATGGAAACGTTCACG-TCGTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACC-----TGGACTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTCTCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
Reference ( family-2211 ) : ACTACTCAAAATTTGAT----AAGGAT-CACTA--G-TTATATATATATGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TAAATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATACCGGGTNTGGCCTCCCTTTGCATCAATGAC-GGCTTGACAACGTCGAGCCATGCTGTCAATAAGCACCCGGATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATT-GTGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGT-CTCC-GCTGAAGGTACTGCTCCACCA-CCCTGGCGCGAA-TGAAGACGGGCGTTATCACCCCATCA-GGATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCG-CNC-CCCCGGTCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTTTCAC-T-GATGTTGGCATCAATGGAAACGTTCACG-TCGTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACC-----TGGACTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTCTCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
gi|1 : ACTACTCAAAATTTGAT----AAGGAT-CACTA--G-TTATATATATATGTATGTA-ATTTACCA-CTAACATAACAAAATCCA--TAATTTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAAAT-CATGAACGAC-ATGAACGTTT---ATTAATACGGAATGCTTG-AAATCTGAT-ACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTT-ACAGCAATCCAGAGAAAG-ATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATG-AGT-TCAATACCGGGTATGGCCTCCC-TTGCATCAATGAC--GCTTGACAACGTCGATCCATGCTGTC-ATAAGCACCCGAATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTG-CAAAGTCGTGGATTGGTGCTCTACGGCGTGAAAGGGCAACCTGC-GCATGTTCCATACATGCTC-ATCGGGTTCAAGTCGCAGCGAACGCGCTGGCCAGTCCATACGGACAATTGTCCTCG-GCTGAAGGTACTGCT-CACCACCCCTGGCGTG-A-TGAAGAAGGGCGATATCACCCCATCAGGGATGA-ACTCAGGACCAACAACACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGCCAC-CATCGGTCAATGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTACTGATTCCA-CCCAGACCATGA-GGA--ACCA-CCAACCT----ACCGACGGTCATGTTTCTC-T-GATGTTGGCATCAATGGAAACGTTCACGTTTGTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGAGTGGACTCATCGGTGAACAGGACTTGAACACAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCC--ATCCAATCGCTCTCGCCGGTGTCGAACAGTTTTAGAGGGACTCAAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAGCGCGTTCAGGAGGTCGTTATGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCGTTCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACCAAAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGCAATGTGCAACGTCACGCTGTGAATA-CCAGCGTCAAGCATTCC-ATACATCTG-CCAGTTGCTCTGTCGTC-GGCAACGCCTTA-ACGTTGAGGGG-GCGTTGTGTTGAATAGCGAA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGGC-CCAATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAACAT-AACTG------TGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTGCAAG-TTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
gi|10 : ACTACTCAAAATTTGATTTATAAGGAT-CACTA--GGTTATACATACATGTATGTGTGTTTACCA-CTAACATAACAAAAGACA--TAAATTTGA-CTCAAAAACGTATTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTGCAAGTTTG
gi|10 : tatatACGGAATGC--TTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AT-AATATTG-C--------TAGTTATACAGTTAATAATTTTTTATTAAAACAGAAAAA-GATCTATGATCtcgaagacgtttttgatttcacttggacataatattgctagttatacagttaataattttttattaaaacagaaaaagatctatgatccttatcaaattttgagtagtata
gi|11 : tatatactactcaaaatttgatttataaggatcactaggttatacatacatgtatgtgtgtttaccactaacataacaaaagacataaatttgactcaaaaacgtatttactcaggttatgaatgaaaattcatgaacggcatgaacttttatcaatACTACTCAAA-TTTGAT----AAGGATTCACTAAGG-TTATAT------GTGT-TA-ATTTACCA-CTAATATTACAAAAGACA--TACATTTGCTCCCAGAAACGTGTTTACTCAAGGTTATGAATGAAAATT-CATGAACGGCAATG-ACTTTT---ATCAAT-CGGAGTGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCATGGAC-ACAATATTGGCAGcttatcaaattttgagtagtata
gi|11 : tttat--ATTTCA--TGGAC--AC-AATATTGGCAGTTATG-CAGTTAT--------TAATTTTTC----AAATAGACAAA-GATCTATGATCttatgcagttattaatttttcaaatagacaaagatctatgatcctcatcaaattttgagtaatat
gi|11 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcATTACTCAAAATTTGAT----GAGGAT-CA-TA--G-ATCTTTGTCTATTTGAAAA-ATTAATAA-CT-GCATAACctcatcaaattttgagtaatat
gi|12 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcatttcatggacacaatattggcaCAGCGTCAAGCATTCCAATACATCTGCCCATTTGCTCTGTCGTCAGGTAACGTCTTACACGTTGAGGGG-GTATT-TGTTGATAAACGTACAGTATAAACACTCAAGTGAGTTTAGAGATTTTAGAAAGAATCAGACACCGATGCCCGAGTGAAAATCGCGCAATGGTAGCAAAAGCATAAACTGTGCACATGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTACAAGTTTGCTGTAGACGTTat
gi|13 : ACTACTCAAATTTTGAT----AAGGAT-CACTAC-G-TT-----T-TATGAGAGTA-ATTTACCA-CGAAAATAACACAAGACA--TAAATTTGA-CTCAGAAACTTGTTTACTCA-GGTTATGAATGAAAATT-CATCAGCGGC-ATTAACTTTT---ATCAAAACGGAATGCTTG-AAATCTGATAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAAGCAATAAAACGAATT--ACAAA--GTTTTGG
gi|14 : atTGTGAAGCCGATTCCGTATC-GTTTGAATGGACACATTCTTCCAAGGG-GCATTCAGGAGGTCGTTACGTAGGCTGGTTGGTGTCCAGAAGGTTATGGTG-TGGTGCCTG-AAGAGCCAAACAAGGGTATGGGCGTTTGGTTGTCGACCTCTAACGAACACA--CCCTTGGTCGG----TGTGCTGGCTGAACC-AAAATTTTATTGTCGGGTTGCAGGCCTTGTTTACAA
gi|15 : ACTACTCAAAATTCGAT----AAGGAT-CACTAG-G-TTATATA---ATGT
gi|15 : ttttatatatTCTATAAT------AGTTACAT-TATATAACCTAGTGATCCTTATCGAaactattatagaaaaggggatgcaaagaatttttttttttttttatgaacaaaaattcatcggcttaaa
gi|16 : ttttatatatactactcaaaatAAAATTTCA-AAATGGC-AGTAACATCTCCAATCAATACAGAATGCTTGCAAGTTTGTCGAAGACAaaaggggatgcaaagaatttttttttttttttatgaacaaaaattcatcggcttaaa
gi|16 : aaagaaaattcCATCTCCAATCAATACAGAATGC--TTGCAAGTTTGTCGAAGACATTTTTTTTATTTCACTTGGAC--AC-AATATTA-C--------CAGTTAT--------ttttttttatttcacttggacacaatattaccagttat
gi|17 : aaagaaaattcaaaatttcaaaatggcagtaaCGTTTCCGAGCTCTGCCAAAGTCGTGGATT-TTGCTCTACGGCGTGAAAAGCAAACCTGCAGCATGTTCTATACATGCTCAATCGGGTTCAAATC-CGGC
gi|18 : T-CATGAACGGC-ATGAACTTTT---ATCAATACGCAATGCTTG-CAAa
gi|18 : ACGCAATGC--TTGCAAGTTT-------------TTG--GTTTCACTTGGAC--AC-AATGATG-CCAGTTATGCAGTTAT--------TAATTTTTgtttttggtttcacttggacacaatgatgccagttatgcagttattaatttttaa
gi|19 : tcatgaacggcatgaacttttatcaatCCCGTCATTGTTCCTCTCTCCAG-ACATGGAGATCTGTT-----AT----------TTCGACCCCAAACCATGATGGA--ACCT-CCGCCAT----A---ACGGTCATA-TTCAC-T-GATaa
gi|2 : ACTACTCAAAATTTGAT----AAGGAT-CACTA--G-----AT-TATATGTGTGTA-ATTTACCA-CTAACATAACAAAAAACAAACAAATT--A-CTCAGAAAAGTGTTTAGTCA-GGGTATGAATCGACATT-CATGAACGTC-ATGAACTTTT---ATCAATACGAGATGCT----------------ACATT--------TTTCAT-TAC-AAAAACTTAACAGCTATCCAGAGAAAGAATT--AC--ACAGTTTTTGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATGACGGGTGTAGCCTCCCCTGGCATCAATGAC-GGCTTGACAACCTCGAGCAATGCTCTCAATGAGCACCCGGATGTTTCCAATGGGAAGGTTGTT-CCACTCTTCCATTAGGGCGTTTCCGAGCTCTGCCAAAGTGGTAGGAT-GTGCTGTACGGCGTGAGAGGGCAACCTGCAGCATGTGTCATACACGCTCAATCGGATTTAAGTC-CAGCGTGCGCGCTGGCCAGTCCATACGGACACTTGT-CT------------GCTGCTTCACCA-CTCTGGCGCGAAATG--GACTGGCATTATCATCC-ATCA-GGTTGA-TCTCAGACCCAACATCACCAGCGT-AGGGTCTGACGTACATGTATACATCGATGATATCATCCCGGTACCG-CAT-CCC-AGCCATTGTTCATCTCTCCAAGACATGAGAATC----ATTCCAT-CACTGCTGATTCCACCCCAGACCATGATGGA--ATTG-CCACTAA----A---ACTGCCATGTT-CAA-T-GTTGTTGTAAT-AATGGACACGTTCACG-TCGTCGTTGCCACACTTGATGCCTCCTGTCTGTAAAGTTCAAACAATACA-----TGGGTTCATCAGTGAACAGGACTTCAACGCAATCGTTCTGTGTCCAAATGACATGATATTTAGCCCAGTCCAATCGCTTCCGCCGGTGTCGAACAGTC--AGAGGGACTCGAATATATGACCTTGTGGAGTTGAGATTTGCATTGTAAAGCAGATTTCGTATC-TTCTGAGTGGACATATTCACCCC-GAG-GCGTTTAGGAGGTCATTTTGTAGGCTGGTTGCTGTCCAAAAGG-GATGGCG-TCGTGTCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACAACCACCACCCCAT-GTCGG----TGAGCT-GCTGTTCC-AAAAGTTTGCTGTT-GGTTCCATGCCCTATTTACAA--CTCTGCCTGACGTTTAGCGC-ATTTGTAAAGTCA-GTTGTGAATGGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGGTCTGTCGTCAGGTGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--TTGTAAACACTCAAATGAGTTT-AAAATGTTAGAAATAAGCAGACACAGATGCCTGATTGAAAATTGTGCAATGGTAGCAAAAGTATCAACTG------TGCTGAGAAACGCACTATCCAT-GCCATGTTTTGCACGTGCCAGTTTGTCAAAGACGTTTTCA--ATTTCACTTGGAC--AC-AACATAA-C--------CAGTTAT--------TAATTTATC----AAA-ACAAAAATGATCTATGATCTGGTAAATTACACACATCTAACCTAGTGATCCTTATCAAt
gi|20 : atCTACTCAAAATTTGAT----AAGGAT-CACTA--G-attttg
gi|20 : tatgAATGCACGTACAAGTTTGCTGTAGACGTTgttngaacgtctacagcaaacttgtacgtgcatt
gi|21 : tatgctactcaaaatttgataaggatcactaggttng--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATC
gi|21 : tgACTACTCAAATTTTGAT----AAGGAT-CA-TA--G-cttatcaaaatttgagtagtata
gi|22 : tgcagttattaattttttaaacagaaaaagatTT----AAACAGAAAAA-GATCTATGATCata
gi|22 : ACTACTCAAAATTTGAT----AAGGAT-CA-TA--G-cttatcaaattttgagtagtata
gi|3 : ttaaacagaaaaagatGT-TGAGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGCTACCG-CAC-CCCCG-TCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCATCCCCTCCTGATTCCACCCCAGACCATGATGAACCACCACCCACCATACGGA---ACGG-CATG-TTCACTT-GATGTTGGCACCGATGata
gi|3 : gCGGTGAACAGATATTGAACTCAATCGTTCTGTGTTC------CACGGT----GG--CAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGCCTTTCTAGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTAAGTGGACACATTCACCCTCGAG-GTGTTCAGGGGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCATGCCTG-AAGAGCCACAAAATTGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CTCAT-GTCGG----TGTGCT-GTTGTACC-AAAAGTTTTCTGTC-GGTTCCAGGTCCTGTTTACAATGCTCTGGTTGACGTTTAGTGC-ATTTGCAACGTCATGTTGTGAATAGCCAGCGTCAAGCATTCTAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGA-GGG-GCATTGTGTTAATAAATGTA--GTGTAAACACTCAAGTGAATTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAATGAAAATCGTGCAATTGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTTGTCGAAAACGTTTTTG--ATTT-ACTTGGACTTACTAGTA-TG----------CAGTTAT--------TACTTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTGCACACATATAATCTAGTGATCCTTATCAAagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatctggtaaattgcacacatataatctagtgatccttatcaaattttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|3 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtcACCACTCAAAATTTGAT----AAGGAT-CACTA--G---AT---TATATGTGTGCA-ATTTACCA-attttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatcGACTTGAGCCCAATCGTTCTATGTCCAAGTGGCATGATCTCCAACCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTC--AAAGGGACTCGAACATATGCCCTTCTGGAGTTGAGACCTGCATTGTGAAGCAGATTCCGTATCCGTCTGAGTGAACACATTCACCCCCGAG-ACATTCAAGCGGTCGCTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGACG-TCGTG-CTGTAAGAGCCACAAAATGGCCTTGGCATTAAGTTGTCGACTTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTAGC-AAAAGTTTGCTGCC-GGTTCCAGGCCCTGTTTACATTGCTCTAGCTGACGTTTAGTGC-ATTTGTAACGTCACGTTGTGAATGGCCAGCGTCAAGCATTCTAATACATCTACCAAGTTGCTCTGTCGTCAGGCAACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTC-GAAATTTTAGAAAGAATCATACACCGACGCCTGAGGGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAAAAATGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTTGTAAAAGACGCTTTTG--ATTTCACTTGAAC--AC-AATATTG-C--------CTGTTAT-----------TTTTTG----AAACAGAAAAA-GATATATGAGCTGGCAAATTACACATTTATAACCTAGTGATCCTTATCatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ATTTAAAATTAGAT----AAGGAT-CACTA--G-GT-----TATAAATGTGTA-ATTTGCCAGCTCATATAtaattttaaat
gi|5 : gacttgagcccaatcgttctatgtccaagtggcatgatctccaacccagtccaatcgctcccgccggtgtcgaacagtcaaagggactcgaacatatgcccttctggagttgagacctgcattgtgaagcagattccgtatccgtctgagtgaacacattcacccccgagacattcaagcggtcgctacgtaggctggttgctgtccagaagggatgacgtcgtgctgtaagagccacaaaatggccttggcattaagttgtcgacttctgacgaccacccccatgtcggtgtgctgctgtagcaaaagtttgctgccggttccaggccctgtttacattgctctagctgacgtttagtgcatttgtaacgtcacgttgtgaatggccagcgtcaagcattctaatacatctaccaagttgctctgtcgtcaggcaacgccttacacgttgagggggcattgtgttgataaacgtagtgtaaacactcaagtgagttcgaaattttagaaagaatcatacaccgacgcctgagggaaaatcgtgcaatggtagcaaaagcataaactgtgatgaaaaatgcatttcccatggcatgaaatgcacttgcaagtttgtaaaagacgcttttgatttcacttgaacacaatattgcctgttattttttgaaacagaaaaagaTA-----A-ACATCGAGGATCTCATCCCGGTACCA-CATTCCCC--TCATTGTTCCTCTCTCCAGGACATGAAAATCTGTTTTTCCAT-CCCTGCTGATTCCACCCCAGACCATGAT---------------AT----A---TCGGTTATGTT-CAC-T-GATGTTGGCATCA-TGGAAACGTTCATG-TCGTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACC-----TGGACTCATCGGCGAACAGGACTTGAACCCGATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACATATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGG--ACATTCACCCCCGAG-GCGTTCAGAAGGTCGTTATGTAGGCTGGTTGTTGTCCAGAAGG-GATAGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGAGTTGTCGACCTCTGACGACCATC--CCCAT-GTCGGTACCTATGCT-GCTGTTCC-AAACGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAACGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTTACGTTGTGAATAGCCAGCGTCAAACATTCCCATACATCTGCCCAGTTGCTCTGTCGTGAGGTGACGCCTTACACGTCGAGGGG-ACATTGTGTTGATAAACGTA--GTGTAAACACT----------------TTTTAGAAAGAATC
gi|6 : ACTACTCAAAATTTGAT----AAGGAT-CACTC--G-GT-----TATATGTGTGTA-ATTTACCA-CTAACATTACAAAAGACA--TAAATTTGC-CTCAGAAACGTGTTTACTCA-GGTTAGTAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCAGACAACAACACCAAAAGGCATTTCAT-TACAAAAAAGTTAACAGCAAACCAGAGAAAGAATTACAC--A--GTTTTGGGGGATAGTCCATCATTACACTTACATGTTGTCGATGAAGTGTCAATACAGGGTTTGGCCTCCCTTTGCATCAATGACGGGCTTGACAACGTCGAGCCATACTGTCAATAATCACCCGGGTGTTTCCAATGGGAAG-TTG-TTCCACTCTTCCATGAAGGTGTTTCAGAGCTCTATCAAAGTTGTTGATT-GTGCTCTACGGCGTGAAAGGGCAACCg
gi|7 : acCCTGCAGCATGTTCCATACATGTTCAATCGGGTT-AAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGAAAATTGT-CTCCTGCTGAAGATATTGCTCCACCA-CCCTGGCGCGA--TGAAGACGGGCGTTATCACC--ATCA-GGATGACACTCAGGGCCAA--GCACCAGCATTAGAGTCTGACGTA-----A-ACATCGAGGATCTCATCGC--TAC-G-CCC-CCC--GTCATTGTTCCCTTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTCCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGCCATG-TTCAC-TGGAT-TTGG-ATTCATGGAAACGTTCAAG-T-GTCGTCGCCACACTGGGT
gi|7 : CAATGGAAACGTTCAAG-TTGTCGTCGCCACACTGGGTGCCTCtgaggcacccagtgtggcgacgacaacttgaacgtttccattgtctgtaaagtccaaacgatacctgg
gi|7 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttTGTCTGTAAAGTCCAAACGATACC-----TGGtctgtaaagtccaaacgatacctgg
gi|8 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttgaggcacccagtgtggcgacgacaacttgaacgtttccatACTAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATTCCGGTACCG-CAC-CCCCA-TCATTGTTCCTCTCTCCAGGACATGAATATCTGCTCTTCCAT-CCCTGGTGATTTCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTT-CAC-T-GATGTTGGCATCATTGGAAACGTTCACG-TTGTCGTTGCCACACTCAGTGCCTCTGGTCTGTAAAGTCCAAACAATACC-----TGAACTCATCGGTGAACAGGACTTGAACTCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCTAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCCGAG
gi|9 : gtCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCATG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGGCGACCTTTGACGATCCTC--TCCAT-GTCGG----TGTGCA-GTTGTACC-AAAAGTTTGTTTTC-GGTTCCAGGCCCTGTTTACTATGCTCTGGCTGACGTTTAGT----TTAG------CACGCTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTTCTCTGTTGCTTTGTCCTCAGGCGACGCCTTACATTTTGAGGGGAGCAGTGTCTTGATAAACGTA--GTGGAAACACTCAAGTGAGTTT-CAAATTTTAAAAAGAATGAGA
Alignments
lowQualScore : 3333333 1 11 11111 333333 1 1 1 1 1 4444444 1 33 22 1 1 11111 22 11111111 111 11 22222 2222 1111 222222 3333333333 11111111 1111
lowQualScore : 6666 3 1 9999999 8 5 5 99 6 6 5 5 888 0 3 0 8 8 3 1 3 33 88888 888888 7 6 1 2 3 6 7 3 7 7 0 2 0 0 0 3 3 6 0 1111111 3 6 3 77 7 00 3 3 1 6 1 8 66666 6 7777 00 3 5 3 77 66 33333333 2 555 5 5 2 1 1 33 1 55555 1 2 9999 5 2 6 5 5 5 77 5 2222 5 5 5 1 6 3 1 1 5 77 5 0 5 333333 6 1 7 1 66 66 5 0 1111111111 66666666 0000 5 0
lowQualScore : .... . . ....... . . . .. . . . . ... . . . . . . . . .. ..... ...... . . . . . . . . . . . . . . . . . . . ....... . . . .. . .. . . . . . . ..... . .... .. . . . .. .. ........ . ... . . . . . .. . ..... . . .... . . . . . . .. . .... . . . . . . . . . .. . . . ...... . . . . .. .. . . .......... ........ .... . .
lowQualScore : 5555 1 5 3333333 9 0 0 22 7 7 0 0 888 0 2 8 0 0 8 0 2 88 55555 333333 3 7 0 0 3 7 3 3 3 3 7 5 2 2 0 2 2 5 0 0000000 7 7 3 00 3 00 3 3 0 7 0 0 77777 7 8888 33 0 7 0 99 00 11111111 3 000 7 7 5 7 0 00 0 00000 0 5 0000 7 5 7 7 7 7 99 7 1111 7 7 7 7 7 7 0 4 7 99 7 8 6 000000 7 0 3 7 99 99 0 4 8888888888 11111111 6666 0 8
consensus : ACTACTCAAAATTTGAT----AAGGAT-CACTA-G---A-GT-TATATGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TAAATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATACCGGGTNTGGCCTCCCCTTGCATCAATGAC-GGCTTGACAACGTCGAGCCATGCTGTCAATAAGCACCCGGATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATTG-TGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGTC-TC--G-CTGAAGGTACTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACCC-ATCAGG-ATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGC-AC-CCCCGGTCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTTTCAC-T-GATGTTGGCATCAATGGAAACGTTCACGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTCTCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
Reference ( family-2211 ) : ACTACTCAAAATTTGAT----AAGGAT-CACTA-G-TTATAT-TATATGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TAAATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATACCGGGTNTGGCCTCCCCTTGCATCAATGAC-GGCTTGACAACGTCGAGCCATGCTGTCAATAAGCACCCGGATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATTG-TGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGTC-TC--G-CTGAAGGTACTGCTCCACCACCC-TGGCGCGAA-TGAAGACGGGCGTTATCACCC-ATCAGG-ATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGC-AC-CCCCGGTCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTTTCAC-T-GATGTTGGCATCAATGGAAACGTTCACGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTCTCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
gi|1 : ACTACTCAAAATTTGAT----AAGGAT-CACTA-G-TTATATATATATGTATGTA-ATTTACCA-CTAACATAACAAAATCCA--TAATTTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAAAT-CATGAACGAC-ATGAACGTTT---ATTAATACGGAATGCTTG-AAATCTGATA-CAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTA-CAGCAATCCAGAGAAAGA-TT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGA-GT-TCAATACCGGGTATGGCCTCCC-TTGCATCAATGAC-G-CTTGACAACGTCGATCCATGCTGTCA-TAAGCACCCGAATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGC-AAAGTCGTGGATTGGTGCTCTACGGCGTGAAAGGGCAACCTGC-GCATGTTCCATACATGCTCA-TCGGGTTCAAGTCGCAGCGAACGCGCTGGCCAGTCCATACGGACAATTGTCCTC--GGCTGAAGGTACTGCTC-ACCACCCCTGGCGTGA--TGAAGAAGGGCGATATCACCCCATCAGGGATGA-ACTCAGGACCAACAACACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGCCAC-CATCGGTCAATGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTACTGATTCCACCC-AGACCATGA-GGA--ACCA-CCAACCT----ACCGACGGTCATGTTTCTC-T-GATGTTGGCATCAATGGAAACGTTCACGTTTGTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGAGTGGACTCATCGGTGAACAGGACTTGAACACAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCC--ATCCAATCGCTCTCGCCGGTGTCGAACAGTTTTAGAGGGACTCAAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAGCGCGTTCAGGAGGTCGTTATGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCGTTCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACCAAAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGCAATGTGCAACGTCACGCTGTGAATA-CCAGCGTCAAGCATTCC-ATACATCTG-CCAGTTGCTCTGTCGTC-GGCAACGCCTTA-ACGTTGAGGGG-GCGTTGTGTTGAATAGCGAA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGGC-CCAATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAACAT-AACTG------TGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTGCAAG-TTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
gi|10 : ACTACTCAAAATTTGATTTATAAGGAT-CACTA-GGTTATACATACATGTATGTGTGTTTACCA-CTAACATAACAAAAGACA--TAAATTTGA-CTCAAAAACGTATTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTGCAAGTTTG
gi|10 : tatatACGGAATGC--TTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AT-AATATTG-C--------TAGTTATACAGTTAATAATTTTTTATTAAAACAGAAAAA-GATCTATGATCtcgaagacgtttttgatttcacttggacataatattgctagttatacagttaataattttttattaaaacagaaaaagatctatgatccttatcaaattttgagtagtata
gi|11 : tatatactactcaaaatttgatttataaggatcactaggttatacatacatgtatgtgtgtttaccactaacataacaaaagacataaatttgactcaaaaacgtatttactcaggttatgaatgaaaattcatgaacggcatgaacttttatcaatACTACTCAAA-TTTGAT----AAGGATTCACTA-----AGGT-TATATGTGT-TA-ATTTACCA-CTAATATTACAAAAGACA--TACATTTGCTCCCAGAAACGTGTTTACTCAAGGTTATGAATGAAAATT-CATGAACGGCAATG-ACTTTT---ATCAAT-CGGAGTGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCATGGAC-ACAATATTGGCAGcttatcaaattttgagtagtata
gi|11 : tttat--ATTTCA--TGGAC--AC-AATATTGGCAGTTATG-CAGTTAT--------TAATTTTTC----AAATAGACAAA-GATCTATGATCttatgcagttattaatttttcaaatagacaaagatctatgatcctcatcaaattttgagtaatat
gi|11 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcATTACTCAAAATTTGAT----GAGGAT-CA-TA-G-ctcatcaaattttgagtaatat
gi|12 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcatttcatggacacaatattggcagttatgcagttattaatttttcaaatagacaaagatCAGCGTCAAGCATTCCAATACATCTGCCCATTTGCTCTGTCGTCAGGTAACGTCTTACACGTTGAGGGG-GTATT-TGTTGATAAACGTACAGTATAAACACTCAAGTGAGTTTAGAGATTTTAGAAAGAATCAGACACCGATGCCCGAGTGAAAATCGCGCAATGGTAGCAAAAGCATAAACTGTGCACATGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTACAAGTTTGCTGTAGACGTTat
gi|13 : ACTACTCAAATTTTGAT----AAGGAT-CACTA------CGT-TTTATGAGAGTA-ATTTACCA-CGAAAATAACACAAGACA--TAAATTTGA-CTCAGAAACTTGTTTACTCA-GGTTATGAATGAAAATT-CATCAGCGGC-ATTAACTTTT---ATCAAAACGGAATGCTTG-AAATCTGATAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAAGCAATAAAACGAATT--ACAAA--GTTTTGG
gi|14 : atTGTGAAGCCGATTCCGTATC-GTTTGAATGGACACATTCTTCCAAGGG-GCATTCAGGAGGTCGTTACGTAGGCTGGTTGGTGTCCAGAAGGTTATGGTG-TGGTGCCTG-AAGAGCCAAACAAGGGTATGGGCGTTTGGTTGTCGACCTCTAACGAACACA--CCCTTGGTCGG----TGTGCTGGCTGAACC-AAAATTTTATTGTCGGGTTGCAGGCCTTGTTTACAA
gi|15 : ACTACTCAAAATTCGAT----AAGGAT-CACTAGG-TTATAT-AATGT
gi|15 : ttttatatatTCTATAAT------AGTTACAT-TATATAACCTAGTGATCCTTATCGAaactattatagaaaaggggatgcaaagaatttttttttttttttatgaacaaaaattcatcggcttaaa
gi|16 : ttttatatatactactcaaaatAAAATTTCA-AAATGGC-AGTAACATCTCCAATCAATACAGAATGCTTGCAAGTTTGTCGAAGACAaaaggggatgcaaagaatttttttttttttttatgaacaaaaattcatcggcttaaa
gi|16 : aaagaaaattcCATCTCCAATCAATACAGAATGC--TTGCAAGTTTGTCGAAGACATTTTTTTTATTTCACTTGGAC--AC-AATATTA-C--------CAGTTAT--------ttttttttatttcacttggacacaatattaccagttat
gi|17 : aaagaaaattcaaaatttcaaaatggcagtaaCGTTTCCGAGCTCTGCCAAAGTCGTGGATTT-TGCTCTACGGCGTGAAAAGCAAACCTGCAGCATGTTCTATACATGCTCAATCGGGTTCAAATC-CGGC
gi|18 : T-CATGAACGGC-ATGAACTTTT---ATCAATACGCAATGCTTG-CAAa
gi|18 : ACGCAATGC--TTGCAAGTTT-------------TTG--GTTTCACTTGGAC--AC-AATGATG-CCAGTTATGCAGTTAT--------TAATTTTTgtttttggtttcacttggacacaatgatgccagttatgcagttattaatttttaa
gi|19 : tcatgaacggcatgaacttttatcaatCCCGTCATTGTTCCTCTCTCCAG-ACATGGAGATCTGTT-----AT----------TTCGACCCCAAACCATGATGGA--ACCT-CCGCCAT----A---ACGGTCATA-TTCAC-T-GATaa
gi|2 : ACTACTCAAAATTTGAT----AAGGAT-CACTA-G-----AT-TATATGTGTGTA-ATTTACCA-CTAACATAACAAAAAACAAACAAATT--A-CTCAGAAAAGTGTTTAGTCA-GGGTATGAATCGACATT-CATGAACGTC-ATGAACTTTT---ATCAATACGAGATGCT----------------ACATT--------TTTCAT-TAC-AAAAACTTAACAGCTATCCAGAGAAAGAATT--AC--ACAGTTTTTGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATGACGGGTGTAGCCTCCCCTGGCATCAATGAC-GGCTTGACAACCTCGAGCAATGCTCTCAATGAGCACCCGGATGTTTCCAATGGGAAGGTTGTT-CCACTCTTCCATTAGGGCGTTTCCGAGCTCTGCCAAAGTGGTAGGATG-TGCTGTACGGCGTGAGAGGGCAACCTGCAGCATGTGTCATACACGCTCAATCGGATTTAAGTC-CAGCGTGCGCGCTGGCCAGTCCATACGGACACTTGTC-T-------------GCTGCTTCACCACTC-TGGCGCGAAATG--GACTGGCATTATCATCC-ATCAGG-TTGA-TCTCAGACCCAACATCACCAGCGT-AGGGTCTGACGTACATGTATACATCGATGATATCATCCCGGTACCGC-AT-CCC-AGCCATTGTTCATCTCTCCAAGACATGAGAATC----ATTCCAT-CACTGCTGATTCCACCCCAGACCATGATGGA--ATTG-CCACTAA----A---ACTGCCATGTT-CAA-T-GTTGTTGTAAT-AATGGACACGTTCACGTC-GTCGTTGCCACACTTGATGCCTCCTGTCTGTAAAGTTCAAACAATACATGGG-----TTCATCAGTGAACAGGACTTCAACGCAATCGTTCTGTGTCCAAATGACATGATATTTAGCCCAGTCCAATCGCTTCCGCCGGTGTCGAACAGTC--AGAGGGACTCGAATATATGACCTTGTGGAGTTGAGATTTGCATTGTAAAGCAGATTTCGTATC-TTCTGAGTGGACATATTCACCCC-GAG-GCGTTTAGGAGGTCATTTTGTAGGCTGGTTGCTGTCCAAAAGG-GATGGCG-TCGTGTCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACAACCACCACCCCAT-GTCGG----TGAGCT-GCTGTTCC-AAAAGTTTGCTGTT-GGTTCCATGCCCTATTTACAA--CTCTGCCTGACGTTTAGCGC-ATTTGTAAAGTCA-GTTGTGAATGGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGGTCTGTCGTCAGGTGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--TTGTAAACACTCAAATGAGTTT-AAAATGTTAGAAATAAGCAGACACAGATGCCTGATTGAAAATTGTGCAATGGTAGCAAAAGTATCAACTG------TGCTGAGAAACGCACTATCCAT-GCCATGTTTTGCACGTGCCAGTTTGTCAAAGACGTTTTCA--ATTTCACTTGGAC--AC-AACATAA-C--------CAGTTAT--------TAATTTATC----AAA-ACAAAAATGATCTATGATCTGGTAAATTACACACATCTAACCTAGTGATCCTTATCAAt
gi|20 : atCTACTCAAAATTTGAT----AAGGAT-CACTA-G-attttg
gi|20 : tatgAATGCACGTACAAGTTTGCTGTAGACGTTgttngaacgtctacagcaaacttgtacgtgcatt
gi|21 : tatgctactcaaaatttgataaggatcactaggttng--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATC
gi|21 : tgACTACTCAAATTTTGAT----AAGGAT-CA-TA-G-cttatcaaaatttgagtagtata
gi|22 : tgcagttattaattttttaaacagaaaaagatTT----AAACAGAAAAA-GATCTATGATCata
gi|22 : ACTACTCAAAATTTGAT----AAGGAT-CA-TA-G-cttatcaaattttgagtagtata
gi|3 : ttaaacagaaaaagatGT-TGAGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGCTACCGC-AC-CCCCG-TCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCATCCCCTCCTGATTCCACCCCAGACCATGATGAACCACCACCCACCATACGGA---ACGG-CATG-TTCACTT-GATGTTGGCACCGATGata
gi|3 : gCGGTGAACAGATATTGAACTCAATCGTTCTGTGTTC------CACGGT----GG--CAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGCCTTTCTAGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTAAGTGGACACATTCACCCTCGAG-GTGTTCAGGGGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCATGCCTG-AAGAGCCACAAAATTGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CTCAT-GTCGG----TGTGCT-GTTGTACC-AAAAGTTTTCTGTC-GGTTCCAGGTCCTGTTTACAATGCTCTGGTTGACGTTTAGTGC-ATTTGCAACGTCATGTTGTGAATAGCCAGCGTCAAGCATTCTAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGA-GGG-GCATTGTGTTAATAAATGTA--GTGTAAACACTCAAGTGAATTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAATGAAAATCGTGCAATTGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTTGTCGAAAACGTTTTTG--ATTT-ACTTGGACTTACTAGTA-TG----------CAGTTAT--------TACTTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTGCACACATATAATCTAGTGATCCTTATCAAagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatctggtaaattgcacacatataatctagtgatccttatcaaattttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|3 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtcACCACTCAAAATTTGAT----AAGGAT-CACTA-G-----AT-TATATGTGTGCA-ATTTACCA-attttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatcGACTTGAGCCCAATCGTTCTATGTCCAAGTGGCATGATCTCCAACCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTC--AAAGGGACTCGAACATATGCCCTTCTGGAGTTGAGACCTGCATTGTGAAGCAGATTCCGTATCCGTCTGAGTGAACACATTCACCCCCGAG-ACATTCAAGCGGTCGCTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGACG-TCGTG-CTGTAAGAGCCACAAAATGGCCTTGGCATTAAGTTGTCGACTTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTAGC-AAAAGTTTGCTGCC-GGTTCCAGGCCCTGTTTACATTGCTCTAGCTGACGTTTAGTGC-ATTTGTAACGTCACGTTGTGAATGGCCAGCGTCAAGCATTCTAATACATCTACCAAGTTGCTCTGTCGTCAGGCAACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTC-GAAATTTTAGAAAGAATCATACACCGACGCCTGAGGGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAAAAATGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTTGTAAAAGACGCTTTTG--ATTTCACTTGAAC--AC-AATATTG-C--------CTGTTAT-----------TTTTTG----AAACAGAAAAA-GATATATGAGCTGGCAAATTACACATTTATAACCTAGTGATCCTTATCatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ATTTAAAATTAGAT----AAGGAT-CACTA-G-----GT-TATAAATGTGTA-ATTTGCCAGCTCATATAtaattttaaat
gi|5 : gacttgagcccaatcgttctatgtccaagtggcatgatctccaacccagtccaatcgctcccgccggtgtcgaacagtcaaagggactcgaacatatgcccttctggagttgagacctgcattgtgaagcagattccgtatccgtctgagtgaacacattcacccccgagacattcaagcggtcgctacgtaggctggttgctgtccagaagggatgacgtcgtgctgtaagagccacaaaatggccttggcattaagttgtcgacttctgacgaccacccccatgtcggtgtgctgctgtagcaaaagtttgctgccggttccaggccctgtttacattgctctagctgacgtttagtgcatttgtaacgtcacgttgtgaatggccagcgtcaagcattctaatacatctaccaagttgctctgtcgtcaggcaacgccttacacgttgagggggcattgtgttgataaacgtagtgtaaacactcaagtgagttcgaaattttagaaagaatcatacaccgacgcctgagggaaaatcgtgcaatggtagcaaaagcataaactgtgatgaaaaatgcatttcccatggcatgaaatgcacttgcaagtttgtaaaagacgcttttgatttcacttgaacacaatattgcctgttattttttgaaacagaaaaagaTA-----A-ACATCGAGGATCTCATCCCGGTACCAC-ATTCCCC--TCATTGTTCCTCTCTCCAGGACATGAAAATCTGTTTTTCCAT-CCCTGCTGATTCCACCCCAGACCATGAT---------------AT----A---TCGGTTATGTT-CAC-T-GATGTTGGCATCA-TGGAAACGTTCATGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGCGAACAGGACTTGAACCCGATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACATATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGG--ACATTCACCCCCGAG-GCGTTCAGAAGGTCGTTATGTAGGCTGGTTGTTGTCCAGAAGG-GATAGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGAGTTGTCGACCTCTGACGACCATC--CCCAT-GTCGGTACCTATGCT-GCTGTTCC-AAACGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAACGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTTACGTTGTGAATAGCCAGCGTCAAACATTCCCATACATCTGCCCAGTTGCTCTGTCGTGAGGTGACGCCTTACACGTCGAGGGG-ACATTGTGTTGATAAACGTA--GTGTAAACACT----------------TTTTAGAAAGAATC
gi|6 : ACTACTCAAAATTTGAT----AAGGAT-CACTC-G-----GT-TATATGTGTGTA-ATTTACCA-CTAACATTACAAAAGACA--TAAATTTGC-CTCAGAAACGTGTTTACTCA-GGTTAGTAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCAGACAACAACACCAAAAGGCATTTCAT-TACAAAAAAGTTAACAGCAAACCAGAGAAAGAATTACAC--A--GTTTTGGGGGATAGTCCATCATTACACTTACATGTTGTCGATGAAGTGTCAATACAGGGTTTGGCCTCCCTTTGCATCAATGACGGGCTTGACAACGTCGAGCCATACTGTCAATAATCACCCGGGTGTTTCCAATGGGAAG-TTG-TTCCACTCTTCCATGAAGGTGTTTCAGAGCTCTATCAAAGTTGTTGATTG-TGCTCTACGGCGTGAAAGGGCAACCg
gi|7 : acCCTGCAGCATGTTCCATACATGTTCAATCGGGTT-AAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGAAAATTGTC-TCCTG-CTGAAGATATTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACC--ATCAGG-ATGACACTCAGGGCCAA--GCACCAGCATTAGAGTCTGACGTA-----A-ACATCGAGGATCTCATCGC--TAC-GC--C-CCCCG-TCATTGTTCCCTTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTCCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGCCATG-TTCAC-TGGAT-TTGG-ATTCATGGAAACGTTCAAGT--GTCGTCGCCACACTGGGT
gi|7 : CAATGGAAACGTTCAAGTT-GTCGTCGCCACACTGGGTGCCTCtgaggcacccagtgtggcgacgacaacttgaacgtttccattgtctgtaaagtccaaacgatacctgg
gi|7 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttTGTCTGTAAAGTCCAAACGATACCTGGtctgtaaagtccaaacgatacctgg
gi|8 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttgaggcacccagtgtggcgacgacaacttgaacgtttccatACTAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATTCCGGTACCGC-AC-CCCCA-TCATTGTTCCTCTCTCCAGGACATGAATATCTGCTCTTCCAT-CCCTGGTGATTTCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTT-CAC-T-GATGTTGGCATCATTGGAAACGTTCACGTT-GTCGTTGCCACACTCAGTGCCTCTGGTCTGTAAAGTCCAAACAATACCTGAA-----CTCATCGGTGAACAGGACTTGAACTCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCTAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCCGAG
gi|9 : gtCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCATG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGGCGACCTTTGACGATCCTC--TCCAT-GTCGG----TGTGCA-GTTGTACC-AAAAGTTTGTTTTC-GGTTCCAGGCCCTGTTTACTATGCTCTGGCTGACGTTTAGT----TTAG------CACGCTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTTCTCTGTTGCTTTGTCCTCAGGCGACGCCTTACATTTTGAGGGGAGCAGTGTCTTGATAAACGTA--GTGGAAACACTCAAGTGAGTTT-CAAATTTTAAAAAGAATGAGA
Alignments
lowQualScore : 222222 111111 1 11 11111 333333 1 1 1 1 1 4444444 1 11 22 1 1 11111 22 11111111 111 11 22222 2222 1111 222222 3333333333 11111111 1111
lowQualScore : 6666 3 1 333333 222222 4 4 77 5 1 77 5 4 0 4 888 0 3 0 8 8 3 1 3 33 88888 888888 7 6 1 2 3 6 7 3 7 7 0 2 0 0 0 3 3 6 0 1111111 3 6 3 88 7 00 3 3 1 6 1 8 66666 6 7777 00 3 5 3 77 66 33333333 2 555 5 5 2 1 1 33 1 55555 1 2 9999 5 2 6 5 5 5 77 5 2222 5 5 5 1 6 3 1 1 5 77 5 0 5 333333 6 1 7 1 66 66 5 0 1111111111 66666666 0000 5
lowQualScore : .... . . ...... ...... . . .. . . .. . . . . ... . . . . . . . . .. ..... ...... . . . . . . . . . . . . . . . . . . . ....... . . . .. . .. . . . . . . ..... . .... .. . . . .. .. ........ . ... . . . . . .. . ..... . . .... . . . . . . .. . .... . . . . . . . . . .. . . . ...... . . . . .. .. . . .......... ........ .... .
lowQualScore : 5555 1 5 888888 888888 4 4 99 7 4 00 7 4 1 4 888 0 2 8 0 0 8 0 2 88 55555 333333 3 7 0 0 3 7 3 3 3 3 7 5 2 2 0 2 2 5 0 0000000 7 7 3 33 3 00 3 3 0 7 0 0 77777 7 8888 33 0 7 0 99 00 11111111 3 000 7 7 5 7 0 00 0 00000 0 5 0000 7 5 7 7 7 7 99 7 1111 7 7 7 7 7 7 0 4 7 99 7 8 6 000000 7 0 3 7 99 99 0 4 8888888888 11111111 6666 0
consensus : ACTACTCAAAATTTGAT----AAGGAT-CACTAG----AGTTATA------TGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TA-AATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATACCGGGTNTGGCCTCCCCTTGCATCAATGAC-GGCTTGACAACGTCGAGCCATGCTGTCAATAAGCACCCGGATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATTG-TGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGTC-TC--G-CTGAAGGTACTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACCC-ATCAGG-ATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGC-AC-CCCCGGTCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTTTCAC-T-GATGTTGGCATCAATGGAAACGTTCACGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTCTCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
Reference ( family-2211 ) : ACTACTCAAAATTTGAT----AAGGAT-CACTAG----AGTTATA------TGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TA-AATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATACCGGGTNTGGCCTCCCCTTGCATCAATGAC-GGCTTGACAACGTCGAGCCATGCTGTCAATAAGCACCCGGATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATTG-TGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGTC-TC--G-CTGAAGGTACTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACCC-ATCAGG-ATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGC-AC-CCCCGGTCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTTTCAC-T-GATGTTGGCATCAATGGAAACGTTCACGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTCTCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
gi|1 : ACTACTCAAAATTTGAT----AAGGAT-CACTAGTTATATATATA------TGTATGTA-ATTTACCA-CTAACATAACAAAATCCA--TA-ATTTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAAAT-CATGAACGAC-ATGAACGTTT---ATTAATACGGAATGCTTG-AAATCTGATA-CAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTA-CAGCAATCCAGAGAAAGA-TT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGA-GT-TCAATACCGGGTATGGCCTCCC-TTGCATCAATGAC-G-CTTGACAACGTCGATCCATGCTGTCA-TAAGCACCCGAATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGC-AAAGTCGTGGATTGGTGCTCTACGGCGTGAAAGGGCAACCTGC-GCATGTTCCATACATGCTCA-TCGGGTTCAAGTCGCAGCGAACGCGCTGGCCAGTCCATACGGACAATTGTCCTC--GGCTGAAGGTACTGCTC-ACCACCCCTGGCGTGA--TGAAGAAGGGCGATATCACCCCATCAGGGATGA-ACTCAGGACCAACAACACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGCCAC-CATCGGTCAATGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTACTGATTCCACCC-AGACCATGA-GGA--ACCA-CCAACCT----ACCGACGGTCATGTTTCTC-T-GATGTTGGCATCAATGGAAACGTTCACGTTTGTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGAGTGGACTCATCGGTGAACAGGACTTGAACACAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCC--ATCCAATCGCTCTCGCCGGTGTCGAACAGTTTTAGAGGGACTCAAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAGCGCGTTCAGGAGGTCGTTATGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCGTTCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACCAAAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGCAATGTGCAACGTCACGCTGTGAATA-CCAGCGTCAAGCATTCC-ATACATCTG-CCAGTTGCTCTGTCGTC-GGCAACGCCTTA-ACGTTGAGGGG-GCGTTGTGTTGAATAGCGAA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGGC-CCAATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAACAT-AACTG------TGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTGCAAG-TTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
gi|10 : ACTACTCAAAATTTGATTTATAAGGAT-CACTAG-----GTTATACATACATGTATGTGTGTTTACCA-CTAACATAACAAAAGACA--TA-AATTTGA-CTCAAAAACGTATTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTGCAAGTTTG
gi|10 : tatatACGGAATGC--TTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AT-AATATTG-C--------TAGTTATACAGTTAATAATTTTTTATTAAAACAGAAAAA-GATCTATGATCtcgaagacgtttttgatttcacttggacataatattgctagttatacagttaataattttttattaaaacagaaaaagatctatgatccttatcaaattttgagtagtata
gi|11 : tatatactactcaaaatttgatttataaggatcactaggttatacatacatgtatgtgtgtttaccactaacataacaaaagacataaatttgactcaaaaacgtatttactcaggttatgaatgaaaattcatgaacggcatgaacttttatcaatACTACTCAAA-TTTGAT----AAGGATTCACTAA----GGTTATA------TGTGT-TA-ATTTACCA-CTAATATTACAAAAGACA--TA-CATTTGCTCCCAGAAACGTGTTTACTCAAGGTTATGAATGAAAATT-CATGAACGGCAATG-ACTTTT---ATCAAT-CGGAGTGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCATGGAC-ACAATATTGGCAGcttatcaaattttgagtagtata
gi|11 : tttat--ATTTCA--TGGAC--AC-AATATTGGCAGTTATG-CAGTTAT--------TAATTTTTC----AAATAGACAAA-GATCTATGATCttatgcagttattaatttttcaaatagacaaagatctatgatcctcatcaaattttgagtaatat
gi|11 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcATTACTCAAAATTTGAT----GAGGAT-CA-TAG----Actcatcaaattttgagtaatat
gi|12 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcatttcatggacacaatattggcagttatgcagttattaatttttcaaatagacaaagaCAGCGTCAAGCATTCCAATACATCTGCCCATTTGCTCTGTCGTCAGGTAACGTCTTACACGTTGAGGGG-GTATT-TGTTGATAAACGTACAGTATAAACACTCAAGTGAGTTTAGAGATTTTAGAAAGAATCAGACACCGATGCCCGAGTGAAAATCGCGCAATGGTAGCAAAAGCATAAACTGTGCACATGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTACAAGTTTGCTGTAGACGTTat
gi|13 : ACTACTCAAATTTTGAT----AAGGAT-CACTAC-----GTTTTA------TGAGAGTA-ATTTACCA-CGAAAATAACACAAGACA--TA-AATTTGA-CTCAGAAACTTGTTTACTCA-GGTTATGAATGAAAATT-CATCAGCGGC-ATTAACTTTT---ATCAAAACGGAATGCTTG-AAATCTGATAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAAGCAATAAAACGAATT--ACAAA--GTTTTGG
gi|14 : atTGTGAAGCCGATTCCGTATC-GTTTGAATGGACACATTCTTCCAAGGG-GCATTCAGGAGGTCGTTACGTAGGCTGGTTGGTGTCCAGAAGGTTATGGTG-TGGTGCCTG-AAGAGCCAAACAAGGGTATGGGCGTTTGGTTGTCGACCTCTAACGAACACA--CCCTTGGTCGG----TGTGCTGGCTGAACC-AAAATTTTATTGTCGGGTTGCAGGCCTTGTTTACAA
gi|15 : ACTACTCAAAATTCGAT----AAGGAT-CACTAG-----GTTATA------------TA-ATGTA--A-CTATTATAGAAAAGGGGA--TGCAA---------AGAATTTTTTTTTTTT---TTTATGAACAAAAATT-CAT---CGGC-TTAAA
gi|16 : ttttatatatAAAATTTCA-AAATGGC-AGTAACATCTCCAATCAATACAGAATGCTTGCAAGTTTGTCGAAGACA
gi|16 : aaagaaaattcCATCTCCAATCAATACAGAATGC--TTGCAAGTTTGTCGAAGACATTTTTTTTATTTCACTTGGAC--AC-AATATTA-C--------CAGTTAT--------ttttttttatttcacttggacacaatattaccagttat
gi|17 : aaagaaaattcaaaatttcaaaatggcagtaaCGTTTCCGAGCTCTGCCAAAGTCGTGGATTT-TGCTCTACGGCGTGAAAAGCAAACCTGCAGCATGTTCTATACATGCTCAATCGGGTTCAAATC-CGGC
gi|18 : T-CATGAACGGC-ATGAACTTTT---ATCAATACGCAATGCTTG-CAAa
gi|18 : ACGCAATGC--TTGCAAGTTT-------------TTG--GTTTCACTTGGAC--AC-AATGATG-CCAGTTATGCAGTTAT--------TAATTTTTgtttttggtttcacttggacacaatgatgccagttatgcagttattaatttttaa
gi|19 : tcatgaacggcatgaacttttatcaatCCCGTCATTGTTCCTCTCTCCAG-ACATGGAGATCTGTT-----AT----------TTCGACCCCAAACCATGATGGA--ACCT-CCGCCAT----A---ACGGTCATA-TTCAC-T-GATaa
gi|2 : ACTACTCAAAATTTGAT----AAGGAT-CACTAG----A-TTATA------TGTGTGTA-ATTTACCA-CTAACATAACAAAAAACAAACA-AATT--A-CTCAGAAAAGTGTTTAGTCA-GGGTATGAATCGACATT-CATGAACGTC-ATGAACTTTT---ATCAATACGAGATGCT----------------ACATT--------TTTCAT-TAC-AAAAACTTAACAGCTATCCAGAGAAAGAATT--AC--ACAGTTTTTGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATGACGGGTGTAGCCTCCCCTGGCATCAATGAC-GGCTTGACAACCTCGAGCAATGCTCTCAATGAGCACCCGGATGTTTCCAATGGGAAGGTTGTT-CCACTCTTCCATTAGGGCGTTTCCGAGCTCTGCCAAAGTGGTAGGATG-TGCTGTACGGCGTGAGAGGGCAACCTGCAGCATGTGTCATACACGCTCAATCGGATTTAAGTC-CAGCGTGCGCGCTGGCCAGTCCATACGGACACTTGTC-T-------------GCTGCTTCACCACTC-TGGCGCGAAATG--GACTGGCATTATCATCC-ATCAGG-TTGA-TCTCAGACCCAACATCACCAGCGT-AGGGTCTGACGTACATGTATACATCGATGATATCATCCCGGTACCGC-AT-CCC-AGCCATTGTTCATCTCTCCAAGACATGAGAATC----ATTCCAT-CACTGCTGATTCCACCCCAGACCATGATGGA--ATTG-CCACTAA----A---ACTGCCATGTT-CAA-T-GTTGTTGTAAT-AATGGACACGTTCACGTC-GTCGTTGCCACACTTGATGCCTCCTGTCTGTAAAGTTCAAACAATACATGGG-----TTCATCAGTGAACAGGACTTCAACGCAATCGTTCTGTGTCCAAATGACATGATATTTAGCCCAGTCCAATCGCTTCCGCCGGTGTCGAACAGTC--AGAGGGACTCGAATATATGACCTTGTGGAGTTGAGATTTGCATTGTAAAGCAGATTTCGTATC-TTCTGAGTGGACATATTCACCCC-GAG-GCGTTTAGGAGGTCATTTTGTAGGCTGGTTGCTGTCCAAAAGG-GATGGCG-TCGTGTCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACAACCACCACCCCAT-GTCGG----TGAGCT-GCTGTTCC-AAAAGTTTGCTGTT-GGTTCCATGCCCTATTTACAA--CTCTGCCTGACGTTTAGCGC-ATTTGTAAAGTCA-GTTGTGAATGGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGGTCTGTCGTCAGGTGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--TTGTAAACACTCAAATGAGTTT-AAAATGTTAGAAATAAGCAGACACAGATGCCTGATTGAAAATTGTGCAATGGTAGCAAAAGTATCAACTG------TGCTGAGAAACGCACTATCCAT-GCCATGTTTTGCACGTGCCAGTTTGTCAAAGACGTTTTCA--ATTTCACTTGGAC--AC-AACATAA-C--------CAGTTAT--------TAATTTATC----AAA-ACAAAAATGATCTATGATCTGGTAAATTACACACATCTAACCTAGTGATCCTTATCAAt
gi|20 : atCTACTCAAAATTTGAT----AAGGAT-CACTAG-----GTTattttg
gi|20 : tatgAATGCACGTACAAGTTTGCTGTAGACGTTngaacgtctacagcaaacttgtacgtgcatt
gi|21 : tatgctactcaaaatttgataaggatcactaggttng--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATC
gi|21 : tgACTACTCAAATTTTGAT----AAGGAT-CA-TAG----Acttatcaaaatttgagtagtata
gi|22 : tgcagttattaattttttaaacagaaaaagaTT----AAACAGAAAAA-GATCTATGATCata
gi|22 : ACTACTCAAAATTTGAT----AAGGAT-CA-TAG----Acttatcaaattttgagtagtata
gi|3 : ttaaacagaaaaagaGT-TGAGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGCTACCGC-AC-CCCCG-TCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCATCCCCTCCTGATTCCACCCCAGACCATGATGAACCACCACCCACCATACGGA---ACGG-CATG-TTCACTT-GATGTTGGCACCGATGata
gi|3 : gCGGTGAACAGATATTGAACTCAATCGTTCTGTGTTC------CACGGT----GG--CAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGCCTTTCTAGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTAAGTGGACACATTCACCCTCGAG-GTGTTCAGGGGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCATGCCTG-AAGAGCCACAAAATTGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CTCAT-GTCGG----TGTGCT-GTTGTACC-AAAAGTTTTCTGTC-GGTTCCAGGTCCTGTTTACAATGCTCTGGTTGACGTTTAGTGC-ATTTGCAACGTCATGTTGTGAATAGCCAGCGTCAAGCATTCTAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGA-GGG-GCATTGTGTTAATAAATGTA--GTGTAAACACTCAAGTGAATTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAATGAAAATCGTGCAATTGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTTGTCGAAAACGTTTTTG--ATTT-ACTTGGACTTACTAGTA-TG----------CAGTTAT--------TACTTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTGCACACATATAATCTAGTGATCCTTATCAAagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatctggtaaattgcacacatataatctagtgatccttatcaaattttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|3 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtcACCACTCAAAATTTGAT----AAGGAT-CACTAG----A-TTATA------TGTGTGCA-ATTTACCA-attttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatcGACTTGAGCCCAATCGTTCTATGTCCAAGTGGCATGATCTCCAACCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTC--AAAGGGACTCGAACATATGCCCTTCTGGAGTTGAGACCTGCATTGTGAAGCAGATTCCGTATCCGTCTGAGTGAACACATTCACCCCCGAG-ACATTCAAGCGGTCGCTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGACG-TCGTG-CTGTAAGAGCCACAAAATGGCCTTGGCATTAAGTTGTCGACTTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTAGC-AAAAGTTTGCTGCC-GGTTCCAGGCCCTGTTTACATTGCTCTAGCTGACGTTTAGTGC-ATTTGTAACGTCACGTTGTGAATGGCCAGCGTCAAGCATTCTAATACATCTACCAAGTTGCTCTGTCGTCAGGCAACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTC-GAAATTTTAGAAAGAATCATACACCGACGCCTGAGGGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAAAAATGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTTGTAAAAGACGCTTTTG--ATTTCACTTGAAC--AC-AATATTG-C--------CTGTTAT-----------TTTTTG----AAACAGAAAAA-GATATATGAGCTGGCAAATTACACATTTATAACCTAGTGATCCTTATCatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ATTTAAAATTAGAT----AAGGAT-CACTAG-----GTTATA------AATGTGTA-ATTTGCCAGCTCATATAtaattttaaat
gi|5 : gacttgagcccaatcgttctatgtccaagtggcatgatctccaacccagtccaatcgctcccgccggtgtcgaacagtcaaagggactcgaacatatgcccttctggagttgagacctgcattgtgaagcagattccgtatccgtctgagtgaacacattcacccccgagacattcaagcggtcgctacgtaggctggttgctgtccagaagggatgacgtcgtgctgtaagagccacaaaatggccttggcattaagttgtcgacttctgacgaccacccccatgtcggtgtgctgctgtagcaaaagtttgctgccggttccaggccctgtttacattgctctagctgacgtttagtgcatttgtaacgtcacgttgtgaatggccagcgtcaagcattctaatacatctaccaagttgctctgtcgtcaggcaacgccttacacgttgagggggcattgtgttgataaacgtagtgtaaacactcaagtgagttcgaaattttagaaagaatcatacaccgacgcctgagggaaaatcgtgcaatggtagcaaaagcataaactgtgatgaaaaatgcatttcccatggcatgaaatgcacttgcaagtttgtaaaagacgcttttgatttcacttgaacacaatattgcctgttattttttgaaacagaaaaagaTA-----A-ACATCGAGGATCTCATCCCGGTACCAC-ATTCCCC--TCATTGTTCCTCTCTCCAGGACATGAAAATCTGTTTTTCCAT-CCCTGCTGATTCCACCCCAGACCATGAT---------------AT----A---TCGGTTATGTT-CAC-T-GATGTTGGCATCA-TGGAAACGTTCATGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGCGAACAGGACTTGAACCCGATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACATATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGG--ACATTCACCCCCGAG-GCGTTCAGAAGGTCGTTATGTAGGCTGGTTGTTGTCCAGAAGG-GATAGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGAGTTGTCGACCTCTGACGACCATC--CCCAT-GTCGGTACCTATGCT-GCTGTTCC-AAACGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAACGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTTACGTTGTGAATAGCCAGCGTCAAACATTCCCATACATCTGCCCAGTTGCTCTGTCGTGAGGTGACGCCTTACACGTCGAGGGG-ACATTGTGTTGATAAACGTA--GTGTAAACACT----------------TTTTAGAAAGAATC
gi|6 : ACTACTCAAAATTTGAT----AAGGAT-CACTCG-----GTTATA------TGTGTGTA-ATTTACCA-CTAACATTACAAAAGACA--TA-AATTTGC-CTCAGAAACGTGTTTACTCA-GGTTAGTAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCAGACAACAACACCAAAAGGCATTTCAT-TACAAAAAAGTTAACAGCAAACCAGAGAAAGAATTACAC--A--GTTTTGGGGGATAGTCCATCATTACACTTACATGTTGTCGATGAAGTGTCAATACAGGGTTTGGCCTCCCTTTGCATCAATGACGGGCTTGACAACGTCGAGCCATACTGTCAATAATCACCCGGGTGTTTCCAATGGGAAG-TTG-TTCCACTCTTCCATGAAGGTGTTTCAGAGCTCTATCAAAGTTGTTGATTG-TGCTCTACGGCGTGAAAGGGCAACCg
gi|7 : acCCTGCAGCATGTTCCATACATGTTCAATCGGGTT-AAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGAAAATTGTC-TCCTG-CTGAAGATATTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACC--ATCAGG-ATGACACTCAGGGCCAA--GCACCAGCATTAGAGTCTGACGTA-----A-ACATCGAGGATCTCATCGC--TAC-GC--C-CCCCG-TCATTGTTCCCTTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTCCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGCCATG-TTCAC-TGGAT-TTGG-ATTCATGGAAACGTTCAAGT--GTCGTCGCCACACTGGGT
gi|7 : CAATGGAAACGTTCAAGTT-GTCGTCGCCACACTGGGTGCCTCtgaggcacccagtgtggcgacgacaacttgaacgtttccattgtctgtaaagtccaaacgatacctgg
gi|7 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttTGTCTGTAAAGTCCAAACGATACCTGGtctgtaaagtccaaacgatacctgg
gi|8 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttgaggcacccagtgtggcgacgacaacttgaacgtttccatACTAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATTCCGGTACCGC-AC-CCCCA-TCATTGTTCCTCTCTCCAGGACATGAATATCTGCTCTTCCAT-CCCTGGTGATTTCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTT-CAC-T-GATGTTGGCATCATTGGAAACGTTCACGTT-GTCGTTGCCACACTCAGTGCCTCTGGTCTGTAAAGTCCAAACAATACCTGAA-----CTCATCGGTGAACAGGACTTGAACTCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCTAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCCGAG
gi|9 : gtCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCATG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGGCGACCTTTGACGATCCTC--TCCAT-GTCGG----TGTGCA-GTTGTACC-AAAAGTTTGTTTTC-GGTTCCAGGCCCTGTTTACTATGCTCTGGCTGACGTTTAGT----TTAG------CACGCTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTTCTCTGTTGCTTTGTCCTCAGGCGACGCCTTACATTTTGAGGGGAGCAGTGTCTTGATAAACGTA--GTGGAAACACTCAAGTGAGTTT-CAAATTTTAAAAAGAATGAGA
Alignments
lowQualScore : 222222 111111 1 11 11111 333333 1 1 1 1 1 4444444 1 11 22 1 1 11111 22 11111111 111 11 22222 2222 1111 222222 3333333333 11111111 1111
lowQualScore : 6666 3 1 333333 222222 4 4 77 5 1 77 5 4 0 4 888 0 3 0 8 8 3 1 3 33 88888 888888 7 6 1 2 3 6 7 3 7 7 0 2 0 0 0 3 3 6 0 1111111 3 6 3 88 7 00 3 3 1 6 1 8 66666 6 7777 00 3 5 3 77 66 33333333 2 555 5 5 2 1 1 33 1 55555 1 2 9999 5 2 6 5 5 5 77 5 2222 5 5 5 1 6 3 1 1 5 77 5 0 5 333333 6 1 7 1 66 66 5 0 1111111111 66666666 0000 5
lowQualScore : .... . . ...... ...... . . .. . . .. . . . . ... . . . . . . . . .. ..... ...... . . . . . . . . . . . . . . . . . . . ....... . . . .. . .. . . . . . . ..... . .... .. . . . .. .. ........ . ... . . . . . .. . ..... . . .... . . . . . . .. . .... . . . . . . . . . .. . . . ...... . . . . .. .. . . .......... ........ .... .
lowQualScore : 5555 1 5 888888 888888 4 4 99 7 4 00 7 4 1 4 888 0 2 8 0 0 8 0 2 88 55555 333333 3 7 0 0 3 7 3 3 3 3 7 5 2 2 0 2 2 5 0 0000000 7 7 3 33 3 00 3 3 0 7 0 0 77777 7 8888 33 0 7 0 99 00 11111111 3 000 7 7 5 7 0 00 0 00000 0 5 0000 7 5 7 7 7 7 99 7 1111 7 7 7 7 7 7 0 4 7 99 7 8 6 000000 7 0 3 7 99 99 0 4 8888888888 11111111 6666 0
consensus : ACTACTCAAAATTTGAT----AAGGAT-CACTAG----AGTTATA------TGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TA-AATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATACCGGGTNTGGCCTCCCCTTGCATCAATGAC-GGCTTGACAACGTCGAGCCATGCTGTCAATAAGCACCCGGATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATTG-TGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGTC-TC--G-CTGAAGGTACTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACCC-ATCAGG-ATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGC-AC-CCCCGGTCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTTTCAC-T-GATGTTGGCATCAATGGAAACGTTCACGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTCTCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
Reference ( family-2211 ) : ACTACTCAAAATTTGAT----AAGGAT-CACTAG----AGTTATA------TGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TA-AATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATACCGGGTNTGGCCTCCCCTTGCATCAATGAC-GGCTTGACAACGTCGAGCCATGCTGTCAATAAGCACCCGGATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATTG-TGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGTC-TC--G-CTGAAGGTACTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACCC-ATCAGG-ATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGC-AC-CCCCGGTCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTTTCAC-T-GATGTTGGCATCAATGGAAACGTTCACGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTCTCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
gi|1 : ACTACTCAAAATTTGAT----AAGGAT-CACTAGTTATATATATA------TGTATGTA-ATTTACCA-CTAACATAACAAAATCCA--TA-ATTTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAAAT-CATGAACGAC-ATGAACGTTT---ATTAATACGGAATGCTTG-AAATCTGATA-CAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTA-CAGCAATCCAGAGAAAGA-TT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGA-GT-TCAATACCGGGTATGGCCTCCC-TTGCATCAATGAC-G-CTTGACAACGTCGATCCATGCTGTCA-TAAGCACCCGAATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGC-AAAGTCGTGGATTGGTGCTCTACGGCGTGAAAGGGCAACCTGC-GCATGTTCCATACATGCTCA-TCGGGTTCAAGTCGCAGCGAACGCGCTGGCCAGTCCATACGGACAATTGTCCTC--GGCTGAAGGTACTGCTC-ACCACCCCTGGCGTGA--TGAAGAAGGGCGATATCACCCCATCAGGGATGA-ACTCAGGACCAACAACACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGCCAC-CATCGGTCAATGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTACTGATTCCACCC-AGACCATGA-GGA--ACCA-CCAACCT----ACCGACGGTCATGTTTCTC-T-GATGTTGGCATCAATGGAAACGTTCACGTTTGTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGAGTGGACTCATCGGTGAACAGGACTTGAACACAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCC--ATCCAATCGCTCTCGCCGGTGTCGAACAGTTTTAGAGGGACTCAAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAGCGCGTTCAGGAGGTCGTTATGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCGTTCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACCAAAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGCAATGTGCAACGTCACGCTGTGAATA-CCAGCGTCAAGCATTCC-ATACATCTG-CCAGTTGCTCTGTCGTC-GGCAACGCCTTA-ACGTTGAGGGG-GCGTTGTGTTGAATAGCGAA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGGC-CCAATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAACAT-AACTG------TGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTGCAAG-TTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
gi|10 : ACTACTCAAAATTTGATTTATAAGGAT-CACTAG-----GTTATACATACATGTATGTGTGTTTACCA-CTAACATAACAAAAGACA--TA-AATTTGA-CTCAAAAACGTATTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTGCAAGTTTG
gi|10 : tatatACGGAATGC--TTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AT-AATATTG-C--------TAGTTATACAGTTAATAATTTTTTATTAAAACAGAAAAA-GATCTATGATCtcgaagacgtttttgatttcacttggacataatattgctagttatacagttaataattttttattaaaacagaaaaagatctatgatccttatcaaattttgagtagtata
gi|11 : tatatactactcaaaatttgatttataaggatcactaggttatacatacatgtatgtgtgtttaccactaacataacaaaagacataaatttgactcaaaaacgtatttactcaggttatgaatgaaaattcatgaacggcatgaacttttatcaatACTACTCAAA-TTTGAT----AAGGATTCACTAA----GGTTATA------TGTGT-TA-ATTTACCA-CTAATATTACAAAAGACA--TA-CATTTGCTCCCAGAAACGTGTTTACTCAAGGTTATGAATGAAAATT-CATGAACGGCAATG-ACTTTT---ATCAAT-CGGAGTGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCATGGAC-ACAATATTGGCAGcttatcaaattttgagtagtata
gi|11 : tttat--ATTTCA--TGGAC--AC-AATATTGGCAGTTATG-CAGTTAT--------TAATTTTTC----AAATAGACAAA-GATCTATGATCttatgcagttattaatttttcaaatagacaaagatctatgatcctcatcaaattttgagtaatat
gi|11 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcATTACTCAAAATTTGAT----GAGGAT-CA-TAG----Actcatcaaattttgagtaatat
gi|12 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcatttcatggacacaatattggcagttatgcagttattaatttttcaaatagacaaagaCAGCGTCAAGCATTCCAATACATCTGCCCATTTGCTCTGTCGTCAGGTAACGTCTTACACGTTGAGGGG-GTATT-TGTTGATAAACGTACAGTATAAACACTCAAGTGAGTTTAGAGATTTTAGAAAGAATCAGACACCGATGCCCGAGTGAAAATCGCGCAATGGTAGCAAAAGCATAAACTGTGCACATGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTACAAGTTTGCTGTAGACGTTat
gi|13 : ACTACTCAAATTTTGAT----AAGGAT-CACTAC-----GTTTTA------TGAGAGTA-ATTTACCA-CGAAAATAACACAAGACA--TA-AATTTGA-CTCAGAAACTTGTTTACTCA-GGTTATGAATGAAAATT-CATCAGCGGC-ATTAACTTTT---ATCAAAACGGAATGCTTG-AAATCTGATAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAAGCAATAAAACGAATT--ACAAA--GTTTTGG
gi|14 : atTGTGAAGCCGATTCCGTATC-GTTTGAATGGACACATTCTTCCAAGGG-GCATTCAGGAGGTCGTTACGTAGGCTGGTTGGTGTCCAGAAGGTTATGGTG-TGGTGCCTG-AAGAGCCAAACAAGGGTATGGGCGTTTGGTTGTCGACCTCTAACGAACACA--CCCTTGGTCGG----TGTGCTGGCTGAACC-AAAATTTTATTGTCGGGTTGCAGGCCTTGTTTACAA
gi|15 : ACTACTCAAAATTCGAT----AAGGAT-CACTAG-----GTTATA------------TA-ATGTA--A-CTATTATAGAAAAGGGGA--TGCAA---------AGAATTTTTTTTTTTT---TTTATGAACAAAAATT-CAT---CGGC-TTAAA
gi|16 : ttttatatatAAAATTTCA-AAATGGC-AGTAACATCTCCAATCAATACAGAATGCTTGCAAGTTTGTCGAAGACA
gi|16 : aaagaaaattcCATCTCCAATCAATACAGAATGC--TTGCAAGTTTGTCGAAGACATTTTTTTTATTTCACTTGGAC--AC-AATATTA-C--------CAGTTAT--------ttttttttatttcacttggacacaatattaccagttat
gi|17 : aaagaaaattcaaaatttcaaaatggcagtaaCGTTTCCGAGCTCTGCCAAAGTCGTGGATTT-TGCTCTACGGCGTGAAAAGCAAACCTGCAGCATGTTCTATACATGCTCAATCGGGTTCAAATC-CGGC
gi|18 : T-CATGAACGGC-ATGAACTTTT---ATCAATACGCAATGCTTG-CAAa
gi|18 : ACGCAATGC--TTGCAAGTTT-------------TTG--GTTTCACTTGGAC--AC-AATGATG-CCAGTTATGCAGTTAT--------TAATTTTTgtttttggtttcacttggacacaatgatgccagttatgcagttattaatttttaa
gi|19 : tcatgaacggcatgaacttttatcaatCCCGTCATTGTTCCTCTCTCCAG-ACATGGAGATCTGTT-----AT----------TTCGACCCCAAACCATGATGGA--ACCT-CCGCCAT----A---ACGGTCATA-TTCAC-T-GATaa
gi|2 : ACTACTCAAAATTTGAT----AAGGAT-CACTAG----A-TTATA------TGTGTGTA-ATTTACCA-CTAACATAACAAAAAACAAACA-AATT--A-CTCAGAAAAGTGTTTAGTCA-GGGTATGAATCGACATT-CATGAACGTC-ATGAACTTTT---ATCAATACGAGATGCT----------------ACATT--------TTTCAT-TAC-AAAAACTTAACAGCTATCCAGAGAAAGAATT--AC--ACAGTTTTTGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATGACGGGTGTAGCCTCCCCTGGCATCAATGAC-GGCTTGACAACCTCGAGCAATGCTCTCAATGAGCACCCGGATGTTTCCAATGGGAAGGTTGTT-CCACTCTTCCATTAGGGCGTTTCCGAGCTCTGCCAAAGTGGTAGGATG-TGCTGTACGGCGTGAGAGGGCAACCTGCAGCATGTGTCATACACGCTCAATCGGATTTAAGTC-CAGCGTGCGCGCTGGCCAGTCCATACGGACACTTGTC-T-------------GCTGCTTCACCACTC-TGGCGCGAAATG--GACTGGCATTATCATCC-ATCAGG-TTGA-TCTCAGACCCAACATCACCAGCGT-AGGGTCTGACGTACATGTATACATCGATGATATCATCCCGGTACCGC-AT-CCC-AGCCATTGTTCATCTCTCCAAGACATGAGAATC----ATTCCAT-CACTGCTGATTCCACCCCAGACCATGATGGA--ATTG-CCACTAA----A---ACTGCCATGTT-CAA-T-GTTGTTGTAAT-AATGGACACGTTCACGTC-GTCGTTGCCACACTTGATGCCTCCTGTCTGTAAAGTTCAAACAATACATGGG-----TTCATCAGTGAACAGGACTTCAACGCAATCGTTCTGTGTCCAAATGACATGATATTTAGCCCAGTCCAATCGCTTCCGCCGGTGTCGAACAGTC--AGAGGGACTCGAATATATGACCTTGTGGAGTTGAGATTTGCATTGTAAAGCAGATTTCGTATC-TTCTGAGTGGACATATTCACCCC-GAG-GCGTTTAGGAGGTCATTTTGTAGGCTGGTTGCTGTCCAAAAGG-GATGGCG-TCGTGTCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACAACCACCACCCCAT-GTCGG----TGAGCT-GCTGTTCC-AAAAGTTTGCTGTT-GGTTCCATGCCCTATTTACAA--CTCTGCCTGACGTTTAGCGC-ATTTGTAAAGTCA-GTTGTGAATGGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGGTCTGTCGTCAGGTGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--TTGTAAACACTCAAATGAGTTT-AAAATGTTAGAAATAAGCAGACACAGATGCCTGATTGAAAATTGTGCAATGGTAGCAAAAGTATCAACTG------TGCTGAGAAACGCACTATCCAT-GCCATGTTTTGCACGTGCCAGTTTGTCAAAGACGTTTTCA--ATTTCACTTGGAC--AC-AACATAA-C--------CAGTTAT--------TAATTTATC----AAA-ACAAAAATGATCTATGATCTGGTAAATTACACACATCTAACCTAGTGATCCTTATCAAt
gi|20 : atCTACTCAAAATTTGAT----AAGGAT-CACTAG-----GTTattttg
gi|20 : tatgAATGCACGTACAAGTTTGCTGTAGACGTTngaacgtctacagcaaacttgtacgtgcatt
gi|21 : tatgctactcaaaatttgataaggatcactaggttng--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATC
gi|21 : tgACTACTCAAATTTTGAT----AAGGAT-CA-TAG----Acttatcaaaatttgagtagtata
gi|22 : tgcagttattaattttttaaacagaaaaagaTT----AAACAGAAAAA-GATCTATGATCata
gi|22 : ACTACTCAAAATTTGAT----AAGGAT-CA-TAG----Acttatcaaattttgagtagtata
gi|3 : ttaaacagaaaaagaGT-TGAGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGCTACCGC-AC-CCCCG-TCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCATCCCCTCCTGATTCCACCCCAGACCATGATGAACCACCACCCACCATACGGA---ACGG-CATG-TTCACTT-GATGTTGGCACCGATGata
gi|3 : gCGGTGAACAGATATTGAACTCAATCGTTCTGTGTTC------CACGGT----GG--CAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGCCTTTCTAGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTAAGTGGACACATTCACCCTCGAG-GTGTTCAGGGGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCATGCCTG-AAGAGCCACAAAATTGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CTCAT-GTCGG----TGTGCT-GTTGTACC-AAAAGTTTTCTGTC-GGTTCCAGGTCCTGTTTACAATGCTCTGGTTGACGTTTAGTGC-ATTTGCAACGTCATGTTGTGAATAGCCAGCGTCAAGCATTCTAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGA-GGG-GCATTGTGTTAATAAATGTA--GTGTAAACACTCAAGTGAATTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAATGAAAATCGTGCAATTGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTTGTCGAAAACGTTTTTG--ATTT-ACTTGGACTTACTAGTA-TG----------CAGTTAT--------TACTTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTGCACACATATAATCTAGTGATCCTTATCAAagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatctggtaaattgcacacatataatctagtgatccttatcaaattttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|3 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtcACCACTCAAAATTTGAT----AAGGAT-CACTAG----A-TTATA------TGTGTGCA-ATTTACCA-attttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatcGACTTGAGCCCAATCGTTCTATGTCCAAGTGGCATGATCTCCAACCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTC--AAAGGGACTCGAACATATGCCCTTCTGGAGTTGAGACCTGCATTGTGAAGCAGATTCCGTATCCGTCTGAGTGAACACATTCACCCCCGAG-ACATTCAAGCGGTCGCTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGACG-TCGTG-CTGTAAGAGCCACAAAATGGCCTTGGCATTAAGTTGTCGACTTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTAGC-AAAAGTTTGCTGCC-GGTTCCAGGCCCTGTTTACATTGCTCTAGCTGACGTTTAGTGC-ATTTGTAACGTCACGTTGTGAATGGCCAGCGTCAAGCATTCTAATACATCTACCAAGTTGCTCTGTCGTCAGGCAACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTC-GAAATTTTAGAAAGAATCATACACCGACGCCTGAGGGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAAAAATGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTTGTAAAAGACGCTTTTG--ATTTCACTTGAAC--AC-AATATTG-C--------CTGTTAT-----------TTTTTG----AAACAGAAAAA-GATATATGAGCTGGCAAATTACACATTTATAACCTAGTGATCCTTATCatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ATTTAAAATTAGAT----AAGGAT-CACTAG-----GTTATA------AATGTGTA-ATTTGCCAGCTCATATAtaattttaaat
gi|5 : gacttgagcccaatcgttctatgtccaagtggcatgatctccaacccagtccaatcgctcccgccggtgtcgaacagtcaaagggactcgaacatatgcccttctggagttgagacctgcattgtgaagcagattccgtatccgtctgagtgaacacattcacccccgagacattcaagcggtcgctacgtaggctggttgctgtccagaagggatgacgtcgtgctgtaagagccacaaaatggccttggcattaagttgtcgacttctgacgaccacccccatgtcggtgtgctgctgtagcaaaagtttgctgccggttccaggccctgtttacattgctctagctgacgtttagtgcatttgtaacgtcacgttgtgaatggccagcgtcaagcattctaatacatctaccaagttgctctgtcgtcaggcaacgccttacacgttgagggggcattgtgttgataaacgtagtgtaaacactcaagtgagttcgaaattttagaaagaatcatacaccgacgcctgagggaaaatcgtgcaatggtagcaaaagcataaactgtgatgaaaaatgcatttcccatggcatgaaatgcacttgcaagtttgtaaaagacgcttttgatttcacttgaacacaatattgcctgttattttttgaaacagaaaaagaTA-----A-ACATCGAGGATCTCATCCCGGTACCAC-ATTCCCC--TCATTGTTCCTCTCTCCAGGACATGAAAATCTGTTTTTCCAT-CCCTGCTGATTCCACCCCAGACCATGAT---------------AT----A---TCGGTTATGTT-CAC-T-GATGTTGGCATCA-TGGAAACGTTCATGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGCGAACAGGACTTGAACCCGATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACATATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGG--ACATTCACCCCCGAG-GCGTTCAGAAGGTCGTTATGTAGGCTGGTTGTTGTCCAGAAGG-GATAGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGAGTTGTCGACCTCTGACGACCATC--CCCAT-GTCGGTACCTATGCT-GCTGTTCC-AAACGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAACGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTTACGTTGTGAATAGCCAGCGTCAAACATTCCCATACATCTGCCCAGTTGCTCTGTCGTGAGGTGACGCCTTACACGTCGAGGGG-ACATTGTGTTGATAAACGTA--GTGTAAACACT----------------TTTTAGAAAGAATC
gi|6 : ACTACTCAAAATTTGAT----AAGGAT-CACTCG-----GTTATA------TGTGTGTA-ATTTACCA-CTAACATTACAAAAGACA--TA-AATTTGC-CTCAGAAACGTGTTTACTCA-GGTTAGTAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCAGACAACAACACCAAAAGGCATTTCAT-TACAAAAAAGTTAACAGCAAACCAGAGAAAGAATTACAC--A--GTTTTGGGGGATAGTCCATCATTACACTTACATGTTGTCGATGAAGTGTCAATACAGGGTTTGGCCTCCCTTTGCATCAATGACGGGCTTGACAACGTCGAGCCATACTGTCAATAATCACCCGGGTGTTTCCAATGGGAAG-TTG-TTCCACTCTTCCATGAAGGTGTTTCAGAGCTCTATCAAAGTTGTTGATTG-TGCTCTACGGCGTGAAAGGGCAACCg
gi|7 : acCCTGCAGCATGTTCCATACATGTTCAATCGGGTT-AAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGAAAATTGTC-TCCTG-CTGAAGATATTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACC--ATCAGG-ATGACACTCAGGGCCAA--GCACCAGCATTAGAGTCTGACGTA-----A-ACATCGAGGATCTCATCGC--TAC-GC--C-CCCCG-TCATTGTTCCCTTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTCCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGCCATG-TTCAC-TGGAT-TTGG-ATTCATGGAAACGTTCAAGT--GTCGTCGCCACACTGGGT
gi|7 : CAATGGAAACGTTCAAGTT-GTCGTCGCCACACTGGGTGCCTCtgaggcacccagtgtggcgacgacaacttgaacgtttccattgtctgtaaagtccaaacgatacctgg
gi|7 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttTGTCTGTAAAGTCCAAACGATACCTGGtctgtaaagtccaaacgatacctgg
gi|8 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttgaggcacccagtgtggcgacgacaacttgaacgtttccatACTAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATTCCGGTACCGC-AC-CCCCA-TCATTGTTCCTCTCTCCAGGACATGAATATCTGCTCTTCCAT-CCCTGGTGATTTCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTT-CAC-T-GATGTTGGCATCATTGGAAACGTTCACGTT-GTCGTTGCCACACTCAGTGCCTCTGGTCTGTAAAGTCCAAACAATACCTGAA-----CTCATCGGTGAACAGGACTTGAACTCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCTAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCCGAG
gi|9 : gtCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCATG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGGCGACCTTTGACGATCCTC--TCCAT-GTCGG----TGTGCA-GTTGTACC-AAAAGTTTGTTTTC-GGTTCCAGGCCCTGTTTACTATGCTCTGGCTGACGTTTAGT----TTAG------CACGCTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTTCTCTGTTGCTTTGTCCTCAGGCGACGCCTTACATTTTGAGGGGAGCAGTGTCTTGATAAACGTA--GTGGAAACACTCAAGTGAGTTT-CAAATTTTAAAAAGAATGAGA
blockSeqs : TTAT T C GG CATACA T G AA C T CT A T A CCA C A G A G G A AC AAA CATGTT A G G C G G A G T T C . A A C . TCCTG A C . AA A C . C C C T T CATGT T ATT CG A C G CC AC ACGGA T TT T G A A C C T . G A TC C A . T . T AC G TACC G . G T . T T A A CA A A TGCACA C G A T TT TT T GCAGTTATG ACAGTTAA ATTA T
blockSeqs : . . C G . . . . . T A . . . . C A . . A T A . ACA . A G T T . G A . . . C . A A T . T . C . . . . . . G . G . . . AT AG C . C . T A C TT . . C A T C C . T C TC . C . . . . . . . . . . T . C C A . . . C . . A A G . . . CCAGTTATG . . .
blockSeqs : . . C G . . . . . T A . . . . . A . . A A A . A C . A A . . . . . AC G T . G . G A T TT . . C A A T G . C C TC . C . . . . . . . . . . C . T C A . . . A . . G A T . . . C . . .
blockSeqs : . . C G . . . . . T A . . . . . A . . A . . . AC G C . C . A A C TT . . C A A T G C C TC . C . . . . . . . . . . T . C C A . . . A . . C A T . . . C . . .
blockSeqs : . . C A . . . . . . C . . . . . . . . C A C . G . A A T TT . . . T C . C T . TC . . . . . . . . . . . . . . . . C . . . . T A G . . . C . . .
blockSeqs : . . C G . . . . . . . . . . . . . . . . . . A . TT . . . . . . . . . . . . . A . . . A . G . . . C . . .
blockSeqs : . . C A . . . . . . . A . T . . . . . . .
blockSeqs : . . C G . . . . . . T .
blockSeqs : . . C G
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqCons : G***** AC** G* A******* TT* C* TC**
originalCons : ACTACTCAAAATTTGAT----AAGGAT-CACTAG----AGTTATA------TGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TA-AATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATACCGGGTNTGGCCTCCCCTTGCATCAATGAC-GGCTTGACAACGTCGAGCCATGCTGTCAATAAGCACCCGGATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATTG-TGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGTC-TC--G-CTGAAGGTACTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACCC-ATCAGG-ATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGC-AC-CCCCGGTCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTTTCAC-T-GATGTTGGCATCAATGGAAACGTTCACGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTCTCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
finalCons : ACTACTCAAAATTTGAT----AAGGAT-CACTAGG-----TTATA------TGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TA-AATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATACCGGGTNTGGCCTCCCCTTGCATCAATGAC-GGCTTGACAACGTCGAGCCATGCTGTCAATAAGCACCCGGATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATTG-TGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGTC-TC--G-CTGAAGGTACTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACCC-ATCAGG-ATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGCAC--CCCCG-TCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCATA-------ACGGTCATGTT-CAC-T-GATGTTGGCATCAATGGAAACGTTCACGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAGTC--AGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
Alignments
lowQualScore : 111111 1 11 11111 333333 1 1 1 1 1 4444444 1 11 22 1 1 11111 11111111 11 22222 1111 222222 3333333333 11111111 1111
lowQualScore : 6666 3 1 3 77777 222222 4 4 77 5 1 77 5 4 0 4 888 0 3 0 8 8 3 1 3 33 88888 888888 7 6 1 2 3 6 7 3 7 7 0 2 0 0 0 3 3 6 0 1111111 3 6 3 88 7 00 3 3 1 6 1 8 66666 6 6 5 3 5 3 77 66 33333333 2 5 5 5 2 1 1 33 1 55555 1 2 99 5 2 6 5 5 5 77 5 2222 5 5 5 1 6 3 1 1 5 77 5 0 5 333333 6 1 7 1 66 66 5 0 1111111111 66666666 0000 5
lowQualScore : .... . . . ..... ...... . . .. . . .. . . . . ... . . . . . . . . .. ..... ...... . . . . . . . . . . . . . . . . . . . ....... . . . .. . .. . . . . . . ..... . . . . . . .. .. ........ . . . . . . . .. . ..... . . .. . . . . . . .. . .... . . . . . . . . . .. . . . ...... . . . . .. .. . . .......... ........ .... .
lowQualScore : 5555 1 5 1 77777 888888 4 4 99 7 4 00 7 4 1 4 888 0 2 8 0 0 8 0 2 88 55555 333333 3 7 0 0 3 7 3 3 3 3 7 5 2 2 0 2 2 5 0 0000000 7 7 3 33 3 00 3 3 0 7 0 0 77777 7 7 7 0 7 0 99 00 11111111 3 7 7 7 5 7 0 00 0 00000 0 5 22 7 5 7 7 7 7 99 7 1111 7 7 7 7 7 7 0 4 7 99 7 8 6 000000 7 0 3 7 99 99 0 4 8888888888 11111111 6666 0
consensus : ACTACTCAAAATTTGAT----AAGGAT-CACTA-GGT-----TATA------TGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TA-AATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATACCGGGTNTGGCCTCCCCTTGCATCAATGAC-GGCTTGACAACGTCGAGCCATGCTGTCAATAAGCACCCGGATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATTG-TGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGTC-TC--G-CTGAAGGTACTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACCC-ATCAGG-ATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGC-ACCCCCG-TCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTT-CAC-T-GATGTTGGCATCAATGGAAACGTTCACGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
Reference ( family-2211 ) : ACTACTCAAAATTTGAT----AAGGAT-CACTA-GGT-----TATA------TGTGTGTA-ATTTACCA-CTAACATAACAAAAGACA--TA-AATTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAANCCAGAGAAAGAATT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATACCGGGTNTGGCCTCCCCTTGCATCAATGAC-GGCTTGACAACGTCGAGCCATGCTGTCAATAAGCACCCGGATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGCCAAAGTCGTGGATTG-TGCTCTACGGCGTGAAAGGGCAACCTGCAGCATGTTCCATACATGCTCAATCGGGTTCAAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGACAATTGTC-TC--G-CTGAAGGTACTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACCC-ATCAGG-ATGA-ACTCAGGNCCAACANCACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGC-ACCCCCG-TCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTGCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTT-CAC-T-GATGTTGGCATCAATGGAAACGTTCACGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGTGAACAGGACTTGAACNCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAG-GCGTTCAGGAGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACC-AAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTCACGTTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCACGAAATGCACTTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
gi|1 : ACTACTCAAAATTTGAT----AAGGAT-CACTA-GTTATATATATA------TGTATGTA-ATTTACCA-CTAACATAACAAAATCCA--TA-ATTTTGA-CTCAGAAACGTGTTTACTCA-GGTTATGAATGAAAAAT-CATGAACGAC-ATGAACGTTT---ATTAATACGGAATGCTTG-AAATCTGATA-CAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTA-CAGCAATCCAGAGAAAGA-TT--AC--A--GTTTTGGGGGATAGTCCATCATTACACTTA------GTCGATGA-GT-TCAATACCGGGTATGGCCTCCC-TTGCATCAATGAC-G-CTTGACAACGTCGATCCATGCTGTCA-TAAGCACCCGAATGTTTCCAATGGGAAG-TTGTTTCCACTCTTCCACGAGGGCGTTTCCGAGCTCTGC-AAAGTCGTGGATTGGTGCTCTACGGCGTGAAAGGGCAACCTGC-GCATGTTCCATACATGCTCA-TCGGGTTCAAGTCGCAGCGAACGCGCTGGCCAGTCCATACGGACAATTGTCCTC--GGCTGAAGGTACTGCTC-ACCACCCCTGGCGTGA--TGAAGAAGGGCGATATCACCCCATCAGGGATGA-ACTCAGGACCAACAACACCAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGGTACCGCCACCATCGGTCAATGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTACTGATTCCACCC-AGACCATGA-GGA--ACCA-CCAACCT----ACCGACGGTCATGTTTCTC-T-GATGTTGGCATCAATGGAAACGTTCACGTTTGTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGAGTGGACTCATCGGTGAACAGGACTTGAACACAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCC--ATCCAATCGCTCTCGCCGGTGTCGAACAGTTTTAGAGGGACTCAAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGGACACATTCACCCCCGAGCGCGTTCAGGAGGTCGTTATGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCGTTCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTACCAAAAAGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAATGCTCTGGCTGACGTTTAGTGCAATGTGCAACGTCACGCTGTGAATA-CCAGCGTCAAGCATTCC-ATACATCTG-CCAGTTGCTCTGTCGTC-GGCAACGCCTTA-ACGTTGAGGGG-GCGTTGTGTTGAATAGCGAA--GTGTAAACACTCAAGTGAGTTT-GAAATTTTAGAAAGAATCAGGC-CCAATGCCTGAGTGAAAATCGTGCAATGGTAGCAAAAACAT-AACTG------TGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTGCAAG-TTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AC-AATATTG-C--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTACACACATATAACCTAGTGATCCTTATCAA
gi|10 : ACTACTCAAAATTTGATTTATAAGGAT-CACTA-GGT-----TATACATACATGTATGTGTGTTTACCA-CTAACATAACAAAAGACA--TA-AATTTGA-CTCAAAAACGTATTTACTCA-GGTTATGAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTGCAAGTTTG
gi|10 : tatatACGGAATGC--TTGCAAGTTTGTCGAAGACGTTTTTG--ATTTCACTTGGAC--AT-AATATTG-C--------TAGTTATACAGTTAATAATTTTTTATTAAAACAGAAAAA-GATCTATGATCtcgaagacgtttttgatttcacttggacataatattgctagttatacagttaataattttttattaaaacagaaaaagatctatgatccttatcaaattttgagtagtata
gi|11 : tatatactactcaaaatttgatttataaggatcactaggttatacatacatgtatgtgtgtttaccactaacataacaaaagacataaatttgactcaaaaacgtatttactcaggttatgaatgaaaattcatgaacggcatgaacttttatcaatACTACTCAAA-TTTGAT----AAGGATTCACTAAGGT-----TATA------TGTGT-TA-ATTTACCA-CTAATATTACAAAAGACA--TA-CATTTGCTCCCAGAAACGTGTTTACTCAAGGTTATGAATGAAAATT-CATGAACGGCAATG-ACTTTT---ATCAAT-CGGAGTGCTTG-AAATCTGACAACAACACCAAAAGGCATTTCATGGAC-ACAATATTGGCAGcttatcaaattttgagtagtata
gi|11 : tttat--ATTTCA--TGGAC--AC-AATATTGGCAGTTATG-CAGTTAT--------TAATTTTTC----AAATAGACAAA-GATCTATGATCttatgcagttattaatttttcaaatagacaaagatctatgatcctcatcaaattttgagtaatat
gi|11 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcATTACTCAAAATTTGAT----GAGGAT-CA-TA-GAT-----ctcatcaaattttgagtaatat
gi|12 : tttatactactcaaatttgataaggattcactaaggttatatgtgttaatttaccactaatattacaaaagacatacatttgctcccagaaacgtgtttactcaaggttatgaatgaaaattcatgaacggcaatgacttttatcaatcggagtgcttgaaatctgacaacaacaccaaaaggcatttcatggacacaatattggcagttatgcagttattaatttttcaaatagacaaagCAGCGTCAAGCATTCCAATACATCTGCCCATTTGCTCTGTCGTCAGGTAACGTCTTACACGTTGAGGGG-GTATT-TGTTGATAAACGTACAGTATAAACACTCAAGTGAGTTTAGAGATTTTAGAAAGAATCAGACACCGATGCCCGAGTGAAAATCGCGCAATGGTAGCAAAAGCATAAACTGTGCACATGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACGTACAAGTTTGCTGTAGACGTTat
gi|13 : ACTACTCAAATTTTGAT----AAGGAT-CACTA-CGT-----TTTA------TGAGAGTA-ATTTACCA-CGAAAATAACACAAGACA--TA-AATTTGA-CTCAGAAACTTGTTTACTCA-GGTTATGAATGAAAATT-CATCAGCGGC-ATTAACTTTT---ATCAAAACGGAATGCTTG-AAATCTGATAACAACACCAAAAGGCATTTCAT-TAC-AAAAAGTTAACAGCAAGCAATAAAACGAATT--ACAAA--GTTTTGG
gi|14 : atTGTGAAGCCGATTCCGTATC-GTTTGAATGGACACATTCTTCCAAGGG-GCATTCAGGAGGTCGTTACGTAGGCTGGTTGGTGTCCAGAAGGTTATGGTG-TGGTGCCTG-AAGAGCCAAACAAGGGTATGGGCGTTTGGTTGTCGACCTCTAACGAACACA--CCCTTGGTCGG----TGTGCTGGCTGAACC-AAAATTTTATTGTCGGGTTGCAGGCCTTGTTTACAA
gi|15 : ACTACTCAAAATTCGAT----AAGGAT-CACTA-GGT-----TATA------------TA-ATGTA--A-CTATTATAGAAAAGGGGA--TGCAA---------AGAATTTTTTTTTTTT---TTTATGAACAAAAATT-CAT---CGGC-TTAAA
gi|16 : ttttatatatAAAATTTCA-AAATGGC-AGTAACATCTCCAATCAATACAGAATGCTTGCAAGTTTGTCGAAGACA
gi|16 : aaagaaaattcCATCTCCAATCAATACAGAATGC--TTGCAAGTTTGTCGAAGACATTTTTTTTATTTCACTTGGAC--AC-AATATTA-C--------CAGTTAT--------ttttttttatttcacttggacacaatattaccagttat
gi|17 : aaagaaaattcaaaatttcaaaatggcagtaaCGTTTCCGAGCTCTGCCAAAGTCGTGGATTT-TGCTCTACGGCGTGAAAAGCAAACCTGCAGCATGTTCTATACATGCTCAATCGGGTTCAAATC-CGGC
gi|18 : T-CATGAACGGC-ATGAACTTTT---ATCAATACGCAATGCTTG-CAAa
gi|18 : ACGCAATGC--TTGCAAGTTT-------------TTG--GTTTCACTTGGAC--AC-AATGATG-CCAGTTATGCAGTTAT--------TAATTTTTgtttttggtttcacttggacacaatgatgccagttatgcagttattaatttttaa
gi|19 : tcatgaacggcatgaacttttatcaatCCCG-TCATTGTTCCTCTCTCCAG-ACATGGAGATCTGTT-----AT----------TTCGACCCCAAACCATGATGGA--ACCT-CCGCCAT----A---ACGGTCATATT-CAC-T-GATaa
gi|2 : ACTACTCAAAATTTGAT----AAGGAT-CACTA-GAT-----TATA------TGTGTGTA-ATTTACCA-CTAACATAACAAAAAACAAACA-AATT--A-CTCAGAAAAGTGTTTAGTCA-GGGTATGAATCGACATT-CATGAACGTC-ATGAACTTTT---ATCAATACGAGATGCT----------------ACATT--------TTTCAT-TAC-AAAAACTTAACAGCTATCCAGAGAAAGAATT--AC--ACAGTTTTTGGGGATAGTCCATCATTACACTTA------GTCGATGAAGTGTCAATGACGGGTGTAGCCTCCCCTGGCATCAATGAC-GGCTTGACAACCTCGAGCAATGCTCTCAATGAGCACCCGGATGTTTCCAATGGGAAGGTTGTT-CCACTCTTCCATTAGGGCGTTTCCGAGCTCTGCCAAAGTGGTAGGATG-TGCTGTACGGCGTGAGAGGGCAACCTGCAGCATGTGTCATACACGCTCAATCGGATTTAAGTC-CAGCGTGCGCGCTGGCCAGTCCATACGGACACTTGTC-T-------------GCTGCTTCACCACTC-TGGCGCGAAATG--GACTGGCATTATCATCC-ATCAGG-TTGA-TCTCAGACCCAACATCACCAGCGT-AGGGTCTGACGTACATGTATACATCGATGATATCATCCCGGTACCGC-ATCCCAG-CCATTGTTCATCTCTCCAAGACATGAGAATC----ATTCCAT-CACTGCTGATTCCACCCCAGACCATGATGGA--ATTG-CCACTAA----A---ACTGCCATGTT-CAA-T-GTTGTTGTAAT-AATGGACACGTTCACGTC-GTCGTTGCCACACTTGATGCCTCCTGTCTGTAAAGTTCAAACAATACATGGG-----TTCATCAGTGAACAGGACTTCAACGCAATCGTTCTGTGTCCAAATGACATGATATTTAGCCCAGTCCAATCGCTTCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAATATATGACCTTGTGGAGTTGAGATTTGCATTGTAAAGCAGATTTCGTATC-TTCTGAGTGGACATATTCACCCC-GAG-GCGTTTAGGAGGTCATTTTGTAGGCTGGTTGCTGTCCAAAAGG-GATGGCG-TCGTGTCTG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGTCGACCTCTGACAACCACCACCCCAT-GTCGG----TGAGCT-GCTGTTCC-AAAAGTTTGCTGTT-GGTTCCATGCCCTATTTACAA--CTCTGCCTGACGTTTAGCGC-ATTTGTAAAGTCA-GTTGTGAATGGCCAGCGTCAAGCATTCCAATACATCTGCCCAGTTGGTCTGTCGTCAGGTGACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--TTGTAAACACTCAAATGAGTTT-AAAATGTTAGAAATAAGCAGACACAGATGCCTGATTGAAAATTGTGCAATGGTAGCAAAAGTATCAACTG------TGCTGAGAAACGCACTATCCAT-GCCATGTTTTGCACGTGCCAGTTTGTCAAAGACGTTTTCA--ATTTCACTTGGAC--AC-AACATAA-C--------CAGTTAT--------TAATTTATC----AAA-ACAAAAATGATCTATGATCTGGTAAATTACACACATCTAACCTAGTGATCCTTATCAAt
gi|20 : atCTACTCAAAATTTGAT----AAGGAT-CACTA-GGT-----Tattttg
gi|20 : tatgAATGCACGTACAAGTTTGCTGTAGACGTTngaacgtctacagcaaacttgtacgtgcatt
gi|21 : tatgctactcaaaatttgataaggatcactaggttng--------CAGTTAT--------TAATTTTTT----AAACAGAAAAA-GATCTATGATC
gi|21 : tgACTACTCAAATTTTGAT----AAGGAT-CA-TA-GAT-----cttatcaaaatttgagtagtata
gi|22 : tgcagttattaattttttaaacagaaaaagTT----AAACAGAAAAA-GATCTATGATCata
gi|22 : ACTACTCAAAATTTGAT----AAGGAT-CA-TA-GAT-----cttatcaaattttgagtagtata
gi|3 : ttaaacagaaaaagGT-TGAGTCTGACGTA-----A-ACATCGAGGATCTCATCCCGCTACCGC-ACCCCCG-TCATTGTTCCTCTCTCCAGGACATGAAGATCTGTTCTTCCATCCCCTCCTGATTCCACCCCAGACCATGATGAACCACCACCCACCATACGGA---ACGG-CATGTT-CACTT-GATGTTGGCACCGATGata
gi|3 : gCGGTGAACAGATATTGAACTCAATCGTTCTGTGTTC------CACGGT----GG--CAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGCCTTTCTAGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTAAGTGGACACATTCACCCTCGAG-GTGTTCAGGGGGTCGTTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGGCG-TCATGCCTG-AAGAGCCACAAAATTGTCTTGGCGTTGGGTTGTCGACCTCTGACGACCACC--CTCAT-GTCGG----TGTGCT-GTTGTACC-AAAAGTTTTCTGTC-GGTTCCAGGTCCTGTTTACAATGCTCTGGTTGACGTTTAGTGC-ATTTGCAACGTCATGTTGTGAATAGCCAGCGTCAAGCATTCTAATACATCTGCCCAGTTGCTCTGTCGTCAGGCGACGCCTTACACGTTGA-GGG-GCATTGTGTTAATAAATGTA--GTGTAAACACTCAAGTGAATTT-GAAATTTTAGAAAGAATCAGACACCGATGCCTGAATGAAAATCGTGCAATTGTAGCAAAAGCATAAACTG------TGATGAGAAACGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTTGTCGAAAACGTTTTTG--ATTT-ACTTGGACTTACTAGTA-TG----------CAGTTAT--------TACTTTTTT----AAACAGAAAAA-GATCTATGATCTGGTAAATTGCACACATATAATCTAGTGATCCTTATCAAagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatctggtaaattgcacacatataatctagtgatccttatcaaattttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|3 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtcACCACTCAAAATTTGAT----AAGGAT-CACTA-GAT-----TATA------TGTGTGCA-ATTTACCA-attttgagtggtatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ggttgagtctgacgtaaacatcgaggatctcatcccgctaccgcacccccgtcattgttcctctctccaggacatgaagatctgttcttccatcccctcctgattccaccccagaccatgatgaaccaccacccaccatacggaacggcatgttcacttgatgttggcaccgatgagtccggtgaacagatattgaactcaatcgttctgtgttccacggtggcagtccaatcgctcccgccggtgtcgaacagtcagagggactcgaacacatgcctttctagagttgagacctgcattgtgaagccgattccgtatcgtctaagtggacacattcaccctcgaggtgttcagggggtcgttacgtaggctggttgctgtccagaagggatggcgtcatgcctgaagagccacaaaattgtcttggcgttgggttgtcgacctctgacgaccaccctcatgtcggtgtgctgttgtaccaaaagttttctgtcggttccaggtcctgtttacaatgctctggttgacgtttagtgcatttgcaacgtcatgttgtgaatagccagcgtcaagcattctaatacatctgcccagttgctctgtcgtcaggcgacgccttacacgttgaggggcattgtgttaataaatgtagtgtaaacactcaagtgaatttgaaattttagaaagaatcagacaccgatgcctgaatgaaaatcgtgcaattgtagcaaaagcataaactgtgatgagaaacgcatttcccatggcatgaaatgcacttgcaagtttgtcgaaaacgtttttgatttacttggacttactagtatgcagttattacttttttaaacagaaaaagatctatgatcGACTTGAGCCCAATCGTTCTATGTCCAAGTGGCATGATCTCCAACCCAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAAAGGGACTCGAACATATGCCCTTCTGGAGTTGAGACCTGCATTGTGAAGCAGATTCCGTATCCGTCTGAGTGAACACATTCACCCCCGAG-ACATTCAAGCGGTCGCTACGTAGGCTGGTTGCTGTCCAGAAGG-GATGACG-TCGTG-CTGTAAGAGCCACAAAATGGCCTTGGCATTAAGTTGTCGACTTCTGACGACCACC--CCCAT-GTCGG----TGTGCT-GCTGTAGC-AAAAGTTTGCTGCC-GGTTCCAGGCCCTGTTTACATTGCTCTAGCTGACGTTTAGTGC-ATTTGTAACGTCACGTTGTGAATGGCCAGCGTCAAGCATTCTAATACATCTACCAAGTTGCTCTGTCGTCAGGCAACGCCTTACACGTTGAGGGG-GCATTGTGTTGATAAACGTA--GTGTAAACACTCAAGTGAGTTC-GAAATTTTAGAAAGAATCATACACCGACGCCTGAGGGAAAATCGTGCAATGGTAGCAAAAGCATAAACTG------TGATGAAAAATGCATTTCCCAT-GGCATGAAATGCACTTGCAAGTTTGTAAAAGACGCTTTTG--ATTTCACTTGAAC--AC-AATATTG-C--------CTGTTAT-----------TTTTTG----AAACAGAAAAA-GATATATGAGCTGGCAAATTACACATTTATAACCTAGTGATCCTTATCatatatggagttgtagcgtaacggaatatactgagctgactg
gi|4 : ATTTAAAATTAGAT----AAGGAT-CACTA-GGT-----TATA------AATGTGTA-ATTTGCCAGCTCATATAtaattttaaat
gi|5 : gacttgagcccaatcgttctatgtccaagtggcatgatctccaacccagtccaatcgctcccgccggtgtcgaacagtcaaagggactcgaacatatgcccttctggagttgagacctgcattgtgaagcagattccgtatccgtctgagtgaacacattcacccccgagacattcaagcggtcgctacgtaggctggttgctgtccagaagggatgacgtcgtgctgtaagagccacaaaatggccttggcattaagttgtcgacttctgacgaccacccccatgtcggtgtgctgctgtagcaaaagtttgctgccggttccaggccctgtttacattgctctagctgacgtttagtgcatttgtaacgtcacgttgtgaatggccagcgtcaagcattctaatacatctaccaagttgctctgtcgtcaggcaacgccttacacgttgagggggcattgtgttgataaacgtagtgtaaacactcaagtgagttcgaaattttagaaagaatcatacaccgacgcctgagggaaaatcgtgcaatggtagcaaaagcataaactgtgatgaaaaatgcatttcccatggcatgaaatgcacttgcaagtttgtaaaagacgcttttgatttcacttgaacacaatattgcctgttattttttgaaacagaaaaagaTA-----A-ACATCGAGGATCTCATCCCGGTACCAC-ATTCCCC-TCATTGTTCCTCTCTCCAGGACATGAAAATCTGTTTTTCCAT-CCCTGCTGATTCCACCCCAGACCATGAT---------------AT----A---TCGGTTATGTT-CAC-T-GATGTTGGCATCA-TGGAAACGTTCATGTC-GTCGTCGCCACACTCGGTGCCTCCTGTCTGTAAAGTCCAAACAATACCTGGA-----CTCATCGGCGAACAGGACTTGAACCCGATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCCAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACATATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCTGAGTGG--ACATTCACCCCCGAG-GCGTTCAGAAGGTCGTTATGTAGGCTGGTTGTTGTCCAGAAGG-GATAGCG-TCGTGCCTG-AAGAGCCACAAAATGGTCTTGGCGTTGAGTTGTCGACCTCTGACGACCATC--CCCAT-GTCGGTACCTATGCT-GCTGTTCC-AAACGTTTGCTGTC-GGTTCCAGGCCCTGTTTACAACGCTCTGGCTGACGTTTAGTGC-ATTTGCAACGTTACGTTGTGAATAGCCAGCGTCAAACATTCCCATACATCTGCCCAGTTGCTCTGTCGTGAGGTGACGCCTTACACGTCGAGGGG-ACATTGTGTTGATAAACGTA--GTGTAAACACT----------------TTTTAGAAAGAATC
gi|6 : ACTACTCAAAATTTGAT----AAGGAT-CACTC-GGT-----TATA------TGTGTGTA-ATTTACCA-CTAACATTACAAAAGACA--TA-AATTTGC-CTCAGAAACGTGTTTACTCA-GGTTAGTAATGAAAATT-CATGAACGGC-ATGAACTTTT---ATCAATACGGAATGCTTG-AAATCAGACAACAACACCAAAAGGCATTTCAT-TACAAAAAAGTTAACAGCAAACCAGAGAAAGAATTACAC--A--GTTTTGGGGGATAGTCCATCATTACACTTACATGTTGTCGATGAAGTGTCAATACAGGGTTTGGCCTCCCTTTGCATCAATGACGGGCTTGACAACGTCGAGCCATACTGTCAATAATCACCCGGGTGTTTCCAATGGGAAG-TTG-TTCCACTCTTCCATGAAGGTGTTTCAGAGCTCTATCAAAGTTGTTGATTG-TGCTCTACGGCGTGAAAGGGCAACCg
gi|7 : acCCTGCAGCATGTTCCATACATGTTCAATCGGGTT-AAGTC-CGGCGAGCGCGCTGGCCAGTCCATACGGAAAATTGTC-TCCTG-CTGAAGATATTGCTCCACCACCC-TGGCGCGA--TGAAGACGGGCGTTATCACC--ATCAGG-ATGACACTCAGGGCCAA--GCACCAGCATTAGAGTCTGACGTA-----A-ACATCGAGGATCTCATCGC--TAC-GC--CCCCCG-TCATTGTTCCCTTCTCCAGGACATGAAGATCTGTTCTTCCAT-CCCTCCTGATTCCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGCCATGTT-CAC-TGGAT-TTGG-ATTCATGGAAACGTTCAAGT--GTCGTCGCCACACTGGGT
gi|7 : CAATGGAAACGTTCAAGTT-GTCGTCGCCACACTGGGTGCCTCtgaggcacccagtgtggcgacgacaacttgaacgtttccattgtctgtaaagtccaaacgatacctgg
gi|7 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttTGTCTGTAAAGTCCAAACGATACCTGGtctgtaaagtccaaacgatacctgg
gi|8 : cctgcagcatgttccatacatgttcaatcgggttaagtccggcgagcgcgctggccagtccatacggaaaattgtctcctgctgaagatattgctccaccaccctggcgcgatgaagacgggcgttatcaccatcaggatgacactcagggccaagcaccagcattagagtctgacgtaaacatcgaggatctcatcgctacgccccccgtcattgttcccttctccaggacatgaagatctgttcttccatccctcctgattccaccccagaccatgatggaaccaccaccataacggccatgttcactggatttggattcatggaaacgttcaagtgtcgtcgccacactgggttgaggcacccagtgtggcgacgacaacttgaacgtttccatACTAGCGT-AGGGTCTGACGTA-----A-ACATCGAGGATCTCATTCCGGTACCGC-ACCCCCA-TCATTGTTCCTCTCTCCAGGACATGAATATCTGCTCTTCCAT-CCCTGGTGATTTCACCCCAGACCATGATGGA--ACCA-CCACCAT----A---ACGGTCATGTT-CAC-T-GATGTTGGCATCATTGGAAACGTTCACGTT-GTCGTTGCCACACTCAGTGCCTCTGGTCTGTAAAGTCCAAACAATACCTGAA-----CTCATCGGTGAACAGGACTTGAACTCAATCGTTCTGTGTCCAAGTGACATGATCTTCAGCCCAGTCTAATCGCTCCCGCCGGTGTCGAACAG--TCAGAGGGACTCGAACACATGACCTTCTGGAGTTGAGACCTGCATTGTGAAGCCGATTCCGTATC-GTCCGAG
gi|9 : gtCTGGTTGCTGTCCAGAAGG-GATGGCG-TCGTGCATG-AAGAGCCACAAAATGGTCTTGGCGTTGGGTTGGCGACCTTTGACGATCCTC--TCCAT-GTCGG----TGTGCA-GTTGTACC-AAAAGTTTGTTTTC-GGTTCCAGGCCCTGTTTACTATGCTCTGGCTGACGTTTAGT----TTAG------CACGCTGTGAATAGCCAGCGTCAAGCATTCCAATACATCTTCTCTGTTGCTTTGTCCTCAGGCGACGCCTTACATTTTGAGGGGAGCAGTGTCTTGATAAACGTA--GTGGAAACACTCAAGTGAGTTT-CAAATTTTAAAAAGAATGAGA