lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 111
lowQualScore : 22 999 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 000 2 3 3 2 33 2
lowQualScore : .. ... .............................................................................................................................................................................................................. ... . . . . .. .
lowQualScore : 88 666 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 000 0 3 3 9 44 5
consensus : ACAAGCACGGTGAACGCACGCAGAGCGAA--C-------GGTG-AC---GC-------ACG---CTGAACGCG--A----TTTG-G--TGAACNGT-GAA-CGCA--------CGGAGAN-----------CGCACGG----TGA----A---CAAC--------GAACGNAAAATGGAC---TG------A-AACGCAC---------TG---AAA---CACGGTG--CG-A--CG---GAAA-AAT-GGT-AAAGTAGAAC-GT-TTCAGGGACT
Reference ( gi|2 ) : ACAAGCACGGTGACCGCACGCAGAGTGAA--C-------AGTG-AC--TGC-------ACG---CTGAACGCA--A----TTT--G--TGAACTGT-GAA-CGCA--------CGGAGAA-----------CGCACGC----TGA----A---CAAT--------GAATGAAAAAT-AAC---TA------A-AACGCAC---------CGCAGAAA---CACGGTGACCG-A--CG---GAAA-AAT-GGT-AAAGTAGAAC-AT-TTCAGGGACT
gi|1 : ACAAACA--GTGAATGCATGAAGAGCAAA--C-------AATG-AC--CGCTCTGTGAACG---GCGAATGTG--AGTGGTTG--G--TGAATAGT-AAA-CGCAAAACTGAACAGACAA-----------CGCATGG----TTA----ATGCCAAGA-------GGATGCACAGTGAAC---AA------AGAATGAGC--------------AAA---CA--------------G---GCAA-AAT-GGT-AAAGTAGAAC-GT-TTCAGGGAC
gi|4 : aGCACGATGAACGTATGGTGAGTGAA----------AG--------GC-------A--------AACGC--------TCT--G--TAAACGGT-GAA-CGC-------------GAG-----------CGTTCGG----TGC----A---CGGC--------AAAAGCAAAAC-TGCG--TGCATGGTG-AATGCAC---------T---TAAAGTCCACAGTGAGTG-T--TG---GGAA-AAT-GTT-AAAG--------T-TTCAGGGACTcga
gi|5 : aaacACAGTGAGTGCATGCAGAGTGAAAGC-------AGT--AC---AC-------ACA---GTGAGCGTA--A----TTTG-G--TGAGCTGT-AGG-TGAA--------CGGTAAC-----------CGCACAG----TAAGCTCA---CAAT--------GAACGg
gi|8 : tacagtccctgaaacatttttgccacttgaaccgtgatgcaaaacgaACGGTG----CACGCATAGTGAA--CGCAATTTGGTG-AA--TGC-------A-------GAACGCG--A----TTGGAG--CGCAGTGT-GAA-C
gi|6 : acagtccctgatacgttatttaccccttgtaaggtgactaaCGCACGCAGAGCGAA--C-------A------------------------CTGAACGCA--A----TTTG-G--TGAGCGGT-
gi|7 : cattccctaaaacactctacgttacatcttgaacgttgaaatgctgaacgcacagtgagtgaccggtaaacgcacacagaacgaatgattagGAGCGAA--C-------GGTG-TT--AGA-------ACG---CTGAACGCA--A----TTT---------CT-T-GAA-CGAT--------TGGGGAG-----------CGCAtggcaa
gi|8 : tacagttcttgaaacgttcttcttttccactcgaaatgtGACTAAA--C-------GGTGCAC---GC-------ATA---GTGAACGCA--A----TTTG-G--TGAA-TGCAGAA-CGCGAT------TGGAG-------------CGCAGTG----TGA----A---Caatggagagcaaaccaagcgcaatgtgaacgat
gi|6 : acagtccctgatacgttatttaccccttgtaaggtTGAA--C-------GTTG-AA------------ATG---CTGAACGCACAG----TGA--G--TGACCGGT-AAA-CGCA--------CACAGAACGAATGATTAGCGCACGCAGAGCGA----A---CACT--------GAACGCAA
gi|3 : cattccctaaaacactctacgttacatctTG-ACCATGC-------ACGGTACTGACCGCCT-A----TTT--GCGTGAACAGT-GAAACGCA--------CAAGTAC-----------CGCACGC----TGA----A----AATAAGCTTTGGATTGAAAAATGAACTTATA------T-AACGCAC---------TG---------CATGGTG-CCGCATTCGTTAGAAA-AATGGGTAAAAGTAGAAC-GTATTTAGGtttggtgagcggttggcaa
gi|11 : GAGAA-----------CGC--GG----TGA----A---CAATCT------GAATGAAAA-T-GAC---TG------A-AACGCA---------------------------------A--CG---GAAAGAAT-GGT-AAAGTAGAACGAT-TTTAGGGac
gi|9 : ----A---CAAC--------ACGTGAAAAAT-GAC---T-------A-AACGCACAGACCGCCACGCTG-AG---CATGGTGGACA-A--CG---G-AA-AAT-GGT-AAAGT-GAAC-GT-TTCAGGGCCTctg
gi|19 : -A--CG---GAAA-AAT-GGT-AAAGTAGAAC-AT-TTCAGGCACg
gi|10 : -A--CG---GAAA-AAT-GGT-ATAGCAGAAC-GT-CTCAAGGACT
gi|23 : atggtgaatgcatgatgatgcagagcgcaaggtgaatgtatatagagcatAAA-AAT-GGT-AAAGTAGAAC-AT-TTCAGGGACTg
gi|25 : AA-AAT-GGT-AAAGTAGAAC-GT-TTCAGGGA
gi|16 : A-AAT-GGT-AAAGTAGAAC-GT-TTTAGGGACTt
gi|13 : A-AGT-GGT-AAAGAAGATC-AT-TTCAGGAACTgcacaagtccttaac
gi|12 : A-AGT-GGT-AAAG-AGATC-AT-TTCAGGAACTgaacgtgtagtgagggtgctcgcaatttggtgagggttggtgaacgc
gi|21 : acGT-AAAGTAGAAC-AT-TTCAGGGACTgaacggtgagtgaagggtagctcgcaatttggtgagagggttggtga
gi|15 : cattttacGT-AAAGTAGAAC-GT-TTCAGGGACT
gi|22 : atttacaggttataattggggcaaaatatttacatgttacAAGTAGAAC-GT-TTCAGGGACT
gi|18 : tcatgtgttacGTAGAAC-GT-TTCAGGGACT
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|14 ): GAGATACAGTCCCCGAAACATTCTTCTTTCCCACTTGCAATGGTGAGCACCACACAAAGTATACGCAGAGT
Unaligned ( gi|17 ): ACCACATGCAGAACGCACCGGACCGTCTGAACATGAAT
Unaligned ( gi|20 ): ACAGTGGTACAATCTCCTGAAACCGTTCTACTTT
Unaligned ( gi|24 ): CACTTCATTTTATAATATTACATTTTCAACA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111
lowQualScore : 4444444444444444444444444444444444 11 2222222222222222 1111 11111111 22222222222222222 3333333333333333333333 0000000000000000000000000000000000000000000
lowQualScore : 66 9999999999999999999999999999999999 77 4 66 44 1 2 5 9999999999999999 1 0000 00000000 33333333333333333 5 2222222222222222222222 1111111111111111111111111111111111111111111 3 2 2 2 2
lowQualScore : .. .................................. .. . .. .. . . . ................ . .... ........ ................. . ...................... ........................................... . . . . .
lowQualScore : 99 5555555555555555555555555555555555 99 4 11 66 0 2 0 9999999999999999 0 1111 66666666 77777777777777777 9 5555555555555555555555 0000000000000000000000000000000000000000000 3 9 5 5 5
consensus : ACAAGCACGGTGAACGCACGCAGAGCGAA--CGGTG--A-C-GC-------ACG---C-----------TGAACGCA-A-T--TTG-GTGAACGGTGAA-CGCA--------CGGA---GAGCGC--ACGGTGA----A---CAA--C--GAAC--------GCAAAA---------TGA--ACTGA---AACGCAC----GA-----------AA---CACGGTGA-CGACG-------GAAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGACT
Reference ( family-1839 ) : ACAAGCACGGTGAACGCACGCAGAGCGAA--CGGTG--A-C-GC-------ACG---C-----------TGAACGCG-A-T--TTG-GTGAACNGTGAA-CGCA--------CGGA---GANCGC--ACGGTGA----A---CAA--C--GAAC--------GNAAAA---------TGG--ACTGA---AACGCACT---GA-----------AA---CACGGTG--CGACG-------GAAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGACT
gi|1 : ACAAACA--GTGAATGCATGAAGAGCAAA--CAATG--A-CCGCTCTGTGAACG---G-----------CGAATGTG-AGTGGTTG-GTGAATAGTAAA-CGCAAAACTGAACAGA---CAACGC--ATGGTTA----ATGCCAA--GA-GGAT--------GCACAG---------TGA--ACAAAG--AATGAGC-----A-----------AA---CA-----------G-------GCAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGAC
gi|10 : aACG-------GAAA-AATGG-TATA-GCAGAACG-T-CTCAAGGACTcga
gi|11 : atggtgaatgcatgatgatgcagagcgcaaggtgaatgtatatagagcatGA---GAACGC----GGTGA----A---CAA--TCTGAAT--------G-AAAA---------TG---ACTGA---AACGCA----------------------------------ACG-------GAAAGAATGG-TAAA-GTAGAACGAT-TTTAGGGg
gi|13 : A-AGTGG-TAAA-GAAGATCA-T-TTCAGGAACTctg
gi|15 : G-TAAA-GTAGAACG-T-TTCAGGGACTgaacgtgtagtgagggtgctcgcaatttggtgagggttggtgaacgc
gi|16 : atttacaggttataattggggcaaaatatttacatgttacA-AATGG-TAAA-GTAGAACG-T-TTTAGGGACT
gi|18 : -GTAGAACG-T-TTCAGGGACTgcacaagtccttaac
gi|19 : gtgtatatacatatacACG-------GAAA-AATGG-TAAA-GTAGAACA-T-TTCAGGCAC
gi|2 : ACAAGCACGGTGACCGCACGCAGAGTGAA--CAGTG--A-CTGC-------ACG---C-----------TGAACGCA-A-T--TT--GTGAACTGTGAA-CGCA--------CGGA---GAACGC--ACGCTGA----A---CAA--T--GAAT--------GAAAAA---------T-A--ACTAA---AACGCACCGCAGA-----------AA---CACGGTGACCGACG-------GAAA-AATGG-TAAA-GTAGAACA-T-TTCAGGGACT
gi|21 : G-TAAA-GTAGAACA-T-TTCAGGGACT
gi|22 : cattttacAA-GTAGAACG-T-TTCAGGGACT
gi|23 : tcatgtgttacAAA-AATGG-TAAA-GTAGAACA-T-TTCAGGGACT
gi|25 : AA-AATGG-TAAA-GTAGAACG-T-TTCAGGGA
gi|3 : --A-T-GC-------ACGGTAC-----------TGACCGCCTA-T--TTGCGTGAACAGTGAAACGCA--------CAAG---TACCGC--ACGCTGA----A----AA--T--AAGCTTTGGATTGAAAAA---------TGA--ACTTATATAACGCACT---G-----------------CATGGTG--CCGCATTCGTTAGAAA-AATGGGTAAAAGTAGAACG-TATTTAGGt
gi|4 : tgaccGCACGATGAACGTATGGTGAGTGAA--AGG---------C-------A-------------------AACGC----T--CTG--TAAACGGTGAA-CGC----------------GAGCGT--TCGGTGC----A---CGG--C--AAAA--------GCAAAACTGCGTGCATGG----TGA---A-TGCACT---TA-----------AAGTCCACAGTGAGTGTTG-------GGAA-AATGT-TAAA-GT---------TTCAGGGACTac
gi|5 : aaacACAGTGAGTGCATGCAGAGTGAAAGCAGT---A-C-AC-------ACA---G-----------TGAGCGTA-A-T--TTG-GTGAGCTGTAGG-TGAA--------CGGT---AACCGC--ACAGTAAGCTCA---CAA--T--GAAC--------Gg
gi|6 : tacagtccctgaaacatttttgccacttgaaccgtgatgcaaaacgaGAA--CGTTG--A-A----------ATG---C-----------TGAACGCACA-G--TGA-GTGACCGGTAAA-CGCA--------CACA---GAACGA--A---TGA----T---TAG--C--GCAC--------GCAGAG---------CGAACACTG----AACGCA
gi|6 : cattccctaaaacactctacgttacatcttCGGTAAACGCACACAGAACGAA--TGATT--AGC-GC-------ACG---CAGAGCGAACACTGAACGCA-A-T--TTG-GTGAGCGGTatttggtgagcggttggcaa
gi|7 : cattccctaaaacactctacgttacatcttgaacgttgaaatgctgaacgcacagtgagtgacGAGCGAA--CGGTGTTA---GA-------ACG---C-----------TGAACGCA-A-T--TTC-TTGAACGAT----------------TGGG---GAGCGCAAATGGAGA----G---CAAACC--AAGC--------GCAATG---------TGA--ACtggcaa
gi|8 : tacagttcttgaaacgttcttcttttccactcgaaatgtAA--CGGTGC-A-C-GC-------ATA---G-----------TGAACGCA-A-T--TTG-GTGAATGCAGAA-CGC-----------GATTGGAGCGC--AGTGTGA----A---Cgat
gi|9 : acagtccctgatacgttatttaccccttgtaaggtgacta----A---CAA--C--ACGT--------GAAAAA---------TG---ACT-A---AACGCACA---GACCGCCACGCTGAG---CATGGTGGACAACG-------GAAA-A-TGG-TAAA-GT-GAACG-T-TTCAGGGCCT
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ACAGTTCCTGAAATGATCTCTTTACCACTTGAACGGTGAGTGAAGGGTAGCTCGCAATTTGGTGAGAGGGTTGGTGA
Unaligned ( gi|14 ): GAGATACAGTCCCCGAAACATTCTTCTTTCCCACTTGCAATGGTGAGCACCACACAAAGTATACGCAGAGT
Unaligned ( gi|17 ): ACCACATGCAGAACGCACCGGACCGTCTGAACATGAAT
Unaligned ( gi|20 ): ACAGTGGTACAATCTCCTGAAACCGTTCTACTTT
Unaligned ( gi|24 ): CACTTCATTTTATAATATTACATTTTCAACA
Alignments
lowQualScore : 11111111111111111111111111111111111111
lowQualScore : 444444444444444444444444444 111 11111111 2222222222222222 2222222222222222222222222222 11111 222222222222 11111111111111111111111111111111111111
lowQualScore : 66 000000000000000000000000000 4 000 44444444 4 777 0 4 5555555555555555 3 8888 2222222222222222222222222222 999 11111 999999999999 88888888888888888888888888888888888888 888 3 2 2 2 2
lowQualScore : .. ........................... . ... ........ . ... . . ................ . .... ............................ ... ..... ............ ...................................... ... . . . . .
lowQualScore : 99 777777777777777777777777777 0 333 55555555 0 000 9 4 9999999999999999 0 8888 0000000000000000000000000000 000 11111 666666666666 44444444444444444444444444444444444444 888 3 9 5 5 5
consensus : ACAAGCACGGTGAACGCACGCAGAGCGAA--CGGTG--A-C-GCACG---C-----------TGAACG-C-A-AT--------TTG-GTGAA---CGGTGAA-CGCA--------CGGA---GAACGC--ACGGTGA----A---CAA--C--GAAC--------GC--AAAG-----TGA--ACTG--A---AACGCAC----GA-----------AA---CACGGTG-A-CG-A--CG---GAAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGACT
Reference ( family-1839 ) : ACAAGCACGGTGAACGCACGCAGAGCGAA--CGGTG--A-C-GCACG---C-----------TGAACG-C-A-AT--------TTG-GTGAA---CGGTGAA-CGCA--------CGGA---GAGCGC--ACGGTGA----A---CAA--C--GAAC--------GC--AAAA-----TGA--ACTG--A---AACGCAC----GA-----------AA---CACGGTG-A-CG-A--CG---GAAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGACT
gi|1 : ACAAACA--GTGAATGCATGAAGAGCAAA--CAATG--A-CCGCTCT---G-----------TGAACGGCGA-ATGTGAGTGGTTG-GTGAA---TAGTAAA-CGCAAAACTGAACAGA---CAACGC--ATGGTTA----ATGCCAA--GA-GGAT--------GC--ACAG-----TGA--ACAA--AG--AATGAGC-----A-----------AA---CA---------------G---GCAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGAC
gi|10 : aA--------TGGT---GAATGC--ATGATGAT---G---CA------GAGC--------GC--AAGG-----TGA--A-TG--T---A---TAT----AG-----------AG---CAT----------A--CG---GAAA-AATGG-TATA-GCAGAACG-T-CTCAAGGACTcga
gi|11 : GA---GAACGC----GGTGA----A---CAA--TCTGAAT--------G---AAAA-----TGA---CTG--A---AACGCA------------------------------------A--CG---GAAAGAATGG-TAAA-GTAGAACGAT-TTTAGGGg
gi|13 : A-AGTGG-TAAA-GAAGATCA-T-TTCAGGAACTctg
gi|13 : CG-C-A-AT--------TTG-GTGAGGGTTGGTGAA-CGCgaacgtgtagtgagggtgctcgcaatttggtgagggttggtgaacgc
gi|15 : agttcctgaaatgatcttctttaccacttgaacgtgtagtgagggtgctG-TAAA-GTAGAACG-T-TTCAGGGACT
gi|16 : atttacaggttataattggggcaaaatatttacatgttacA-AATGG-TAAA-GTAGAACG-T-TTTAGGGACT
gi|18 : -GTAGAACG-T-TTCAGGGACTgcacaagtccttaac
gi|19 : gtgtatatacatatac-A--CG---GAAA-AATGG-TAAA-GTAGAACA-T-TTCAGGCAC
gi|2 : ACAAGCACGGTGACCGCACGCAGAGTGAA--CAGTG--A-CTGCACG---C-----------TGAACG-C-A-AT--------TT--GTGAA---CTGTGAA-CGCA--------CGGA---GAACGC--ACGCTGA----A---CAA--T--GAAT--------GA--AAAA-----T-A--ACTA--A---AACGCACCGCAGA-----------AA---CACGGTG-ACCG-A--CG---GAAA-AATGG-TAAA-GTAGAACA-T-TTCAGGGACT
gi|21 : G-TAAA-GTAGAACA-T-TTCAGGGACT
gi|22 : cattttacAA-GTAGAACG-T-TTCAGGGACT
gi|23 : tcatgtgttacAAA-AATGG-TAAA-GTAGAACA-T-TTCAGGGACT
gi|25 : AA-AATGG-TAAA-GTAGAACG-T-TTCAGGGA
gi|3 : --A-T-GCACGGTAC-----------TGACCG-C-CTAT--------TTGCGTGAA---CAGTGAAACGCA--------CAAG---TACCGC--ACGCTGA----A----AA--T--AAGCTTTGGATTGA--AAAA-----TGA--ACTT--ATATAACGCACT---G-----------------CATGGTG-C-CGCATTCGTTAGAAA-AATGGGTAAAAGTAGAACG-TATTTAGGt
gi|4 : tgaccGCACGATGAACGTATGGTGAGTGAA--AGG---------CA-------------------AACG-C----T--------CTG--TAAA---CGGTGAA-CGC----------------GAGCGT--TCGGTGC----A---CGG--C--AAAA--------GC--AAAACTGCGTGC--A-TGGTG---AATGCACT---TA-----------AAGTCCACAGTG-AGTG-T--TG---GGAA-AATGT-TAAA--------G-T-TTCAGGGACTac
gi|5 : aaacACAGTGAGTGCATGCAGAGTGAAAGCAGT---A-C-ACACA---G-----------TGAGCG-T-A-AT--------TTG-GTGAG---CTGTAGG-TGAA--------CGGT---AACCGC--ACAGTAAGCTCA---CAA--T--GAAC--------Gg
gi|6 : tacagtccctgaaacatttttgccacttgaaccgtgatgcaaaacgaGAA--CGTTG--A-A---ATG---C-----------TGAACG-C-ACAG--------TGA-GTGAC---CGGTAAA-CGCA--------CACA---GAACGA--A---TGA----T---TAG--C--GCAC--------GC--AGAG-----CGAACACTG------AACGCA
gi|6 : cattccctaaaacactctacgttacatcttCGGTAAACGCACACAGAACGAA--TGATT--AGC-GCACG---CAGAGCGAACACTGAACG-C-A-AT--------TTG-GTGAG---CGGTatttggtgagcggttggcaa
gi|7 : cattccctaaaacactctacgttacatcttgaacgttgaaatgctgaacgcacagtgagtgacGAGCGAA--CGGTGTTA---GAACG---C-----------TGAACG-C-A-AT--------TTC-TTGAA---CGAT----------------TGGG---GAGCGCAAATGGAGA----G---CAAACC--AAGC--------GC--AATG-----TGA--ACtggcaa
gi|8 : tacagttcttgaaacgttcttcttttccactcgaaatgtAA--CGGTGC-A-C-GCATA---G-----------TGAACG-C-A-AT--------TTG-GTGAA---TGCAGAA-CGC-----------GATTGGAGCGC--AGTGTGA----A---Cgat
gi|9 : acagtccctgatacgttatttaccccttgtaaggtgacta----A---CAA--C----AC--------GTGAAAAA-----TGA---CT---A---AACGCACA---GACCGCCACGCTGAG---CATGGTGGA-CA-A--CG---GAAA-A-TGG-TAAA-GT-GAACG-T-TTCAGGGCCT
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ACAGTTCCTGAAATGATCTCTTTACCACTTGAACGGTGAGTGAAGGGTAGCTCGCAATTTGGTGAGAGGGTTGGTGA
Unaligned ( gi|14 ): GAGATACAGTCCCCGAAACATTCTTCTTTCCCACTTGCAATGGTGAGCACCACACAAAGTATACGCAGAGT
Unaligned ( gi|17 ): ACCACATGCAGAACGCACCGGACCGTCTGAACATGAAT
Unaligned ( gi|20 ): ACAGTGGTACAATCTCCTGAAACCGTTCTACTTT
Unaligned ( gi|24 ): CACTTCATTTTATAATATTACATTTTCAACA
Alignments
lowQualScore : 444444444444444444444444444 111 11111111 222222222 22222222222222222222222222222222 11111 9999999999999999999999999999999999999999
lowQualScore : 66 000000000000000000000000000 4 000 44444444 4 777 0 4 333333333 1 1 6666 2 77777777777777777777777777777777 1 11111 66 1 5555555555555555555555555555555555555555 888 3 2 2 2 2
lowQualScore : .. ........................... . ... ........ . ... . . ......... . . .... . ................................ . ..... .. . ........................................ ... . . . . .
lowQualScore : 99 777777777777777777777777777 0 333 55555555 0 000 9 4 000000000 6 2 3333 8 00000000000000000000000000000000 1 11111 11 1 6666666666666666666666666666666666666666 888 3 9 5 5 5
consensus : ACAAGCACGGTGAACGCACGCAGAGCGAA--CGGTG--A-C-GCACG---C-----------TGAACG-C-A-AT--------TTG-GTGAA---CGGTGAA-CGCA--------CGGAGAACGC--ACGGTGA----A---CAA--C--GA----AC--------GCAAA-----GTGA--ACTG--A---AACGCAC----GAAA---CACGGTG-A-CG-A--CG---GAAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGACT
Reference ( family-1839 ) : ACAAGCACGGTGAACGCACGCAGAGCGAA--CGGTG--A-C-GCACG---C-----------TGAACG-C-A-AT--------TTG-GTGAA---CGGTGAA-CGCA--------CGGAGAACGC--ACGGTGA----A---CAA--C--GA----AC--------GCAAA-----GTGA--ACTG--A---AACGCAC----GAAA---CACGGTG-A-CG-A--CG---GAAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGACT
gi|1 : ACAAACA--GTGAATGCATGAAGAGCAAA--CAATG--A-CCGCTCT---G-----------TGAACGGCGA-ATGTGAGTGGTTG-GTGAA---TAGTAAA-CGCAAAACTGAACAGACAACGC--ATGGTTA----ATGCCAA--GA-GG----AT--------GCACA-----GTGA--ACAA--AG--AATGAGC-----AAA---CA---------------G---GCAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGAC
gi|10 : aA--------TGGTGAATGC--ATGATGAT---G---CA------GA----GC--------GCAAG-----GTGA--A-TG--T---A---TAT----AGAG---CAT----------A--CG---GAAA-AATGG-TATA-GCAGAACG-T-CTCAAGGACTcga
gi|11 : GAGAACGC----GGTGA----A---CAA--TCTGA----AT--------G-AAA-----ATGA---CTG--A---AACGCA-------------------------A--CG---GAAAGAATGG-TAAA-GTAGAACGAT-TTTAGGGg
gi|13 : A-AGTGG-TAAA-GAAGATCA-T-TTCAGGAACTctg
gi|13 : CG-C-A-AT--------TTG-GTGAGGGTTGGTGAA-CGCgaacgtgtagtgagggtgctcgcaatttggtgagggttggtgaacgc
gi|15 : agttcctgaaatgatcttctttaccacttgaacgtgtagtgagggtgctG-TAAA-GTAGAACG-T-TTCAGGGACT
gi|16 : atttacaggttataattggggcaaaatatttacatgttacA-AATGG-TAAA-GTAGAACG-T-TTTAGGGACT
gi|18 : -GTAGAACG-T-TTCAGGGACTgcacaagtccttaac
gi|19 : gtgtatatacatatac-A--CG---GAAA-AATGG-TAAA-GTAGAACA-T-TTCAGGCAC
gi|2 : ACAAGCACGGTGACCGCACGCAGAGTGAA--CAGTG--A-CTGCACG---C-----------TGAACG-C-A-AT--------TT--GTGAA---CTGTGAA-CGCA--------CGGAGAACGC--ACGCTGA----A---CAA--T--GA----AT--------GAAAA-----AT-A--ACTA--A---AACGCACCGCAGAAA---CACGGTG-ACCG-A--CG---GAAA-AATGG-TAAA-GTAGAACA-T-TTCAGGGACT
gi|21 : G-TAAA-GTAGAACA-T-TTCAGGGACT
gi|22 : cattttacAA-GTAGAACG-T-TTCAGGGACT
gi|23 : tcatgtgttacAAA-AATGG-TAAA-GTAGAACA-T-TTCAGGGACT
gi|25 : AA-AATGG-TAAA-GTAGAACG-T-TTCAGGGA
gi|3 : --A-T-GCACGGTAC-----------TGACCG-C-CTAT--------TTGCGTGAA---CAGTGAAACGCA--------CAAGTACCGC--ACGCTGA----A----AA--T--AA----GCTTTGGATTGAAAA-----ATGA--ACTT--ATATAACGCACT---G------CATGGTG-C-CGCATTCGTTAGAAA-AATGGGTAAAAGTAGAACG-TATTTAGGt
gi|4 : tgaccGCACGATGAACGTATGGTGAGTGAA--AGG---------CA-------------------AACG-C----T--------CTG--TAAA---CGGTGAA-CGC-------------GAGCGT--TCGGTGC----A---CGG--C--AA----AA--------GCAAAACTGCGTGC--A-TGGTG---AATGCACT---TAAAGTCCACAGTG-AGTG-T--TG---GGAA-AATGT-TAAA--------G-T-TTCAGGGACTac
gi|5 : aaacACAGTGAGTGCATGCAGAGTGAAAGCAGT---A-C-ACACA---G-----------TGAGCG-T-A-AT--------TTG-GTGAG---CTGTAGG-TGAA--------CGGTAACCGC--ACAGTAAGCTCA---CAA--T--GA----AC--------Gg
gi|6 : tacagtccctgaaacatttttgccacttgaaccgtgatgcaaaacgaGAA--CGTTG--A-A---ATG---C-----------TGAACG-C-ACAG--------TGA-GTGAC---CGGTAAA-CGCA--------CACAGAACGA--A---TGA----T---TAG--C--GC----AC--------GCAGA-----GCGAACACTG------AACGCA
gi|6 : cattccctaaaacactctacgttacatcttCGGTAAACGCACACAGAACGAA--TGATT--AGC-GCACG---CAGAGCGAACACTGAACG-C-A-AT--------TTG-GTGAG---CGGTatttggtgagcggttggcaa
gi|7 : cattccctaaaacactctacgttacatcttgaacgttgaaatgctgaacgcacagtgagtgacGAGCGAA--CGGTGTTA---GAACG---C-----------TGAACG-C-A-AT--------TTC-TTGAA---CGAT----------------TGGGGAGCGCAAATGGAGA----G---CAAACC--AA----GC--------GCAAT-----GTGA--ACtggcaa
gi|8 : tacagttcttgaaacgttcttcttttccactcgaaatgtAA--CGGTGC-A-C-GCATA---G-----------TGAACG-C-A-AT--------TTG-GTGAA---TGCAGAA-CGCGAT------TGGAG--CGC--AGTGTGA----A---Cgat
gi|9 : acagtccctgatacgttatttaccccttgtaaggtgactaC--ACG-TGA----A---AAA--T--GACTAAAC--------GCACA-----G-----ACCG--C---CACGC-T----GAG----CATGGTGGA-CA-A--CG---GAAA-A-TGG-TAAA-GT-GAACG-T-TTCAGGGCCT
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ACAGTTCCTGAAATGATCTCTTTACCACTTGAACGGTGAGTGAAGGGTAGCTCGCAATTTGGTGAGAGGGTTGGTGA
Unaligned ( gi|14 ): GAGATACAGTCCCCGAAACATTCTTCTTTCCCACTTGCAATGGTGAGCACCACACAAAGTATACGCAGAGT
Unaligned ( gi|17 ): ACCACATGCAGAACGCACCGGACCGTCTGAACATGAAT
Unaligned ( gi|20 ): ACAGTGGTACAATCTCCTGAAACCGTTCTACTTT
Unaligned ( gi|24 ): CACTTCATTTTATAATATTACATTTTCAACA
Alignments
lowQualScore : 444444444444444444444444444 111 11111111 222222222 22222222222222222222222222222222 11111 9999999999999999999999999999999999999999
lowQualScore : 66 000000000000000000000000000 4 000 44444444 4 777 0 4 333333333 1 1 6666 2 77777777777777777777777777777777 1 11111 66 1 5555555555555555555555555555555555555555 888 3 2 2 2 2
lowQualScore : .. ........................... . ... ........ . ... . . ......... . . .... . ................................ . ..... .. . ........................................ ... . . . . .
lowQualScore : 99 777777777777777777777777777 0 333 55555555 0 000 9 4 000000000 6 2 3333 8 00000000000000000000000000000000 1 11111 11 1 6666666666666666666666666666666666666666 888 3 9 5 5 5
consensus : ACAAGCACGGTGAACGCACGCAGAGCGAA--CGGTG--A-C-GCACG---C-----------TGAACG-C-A-AT--------TTG-GTGAA---CGGTGAA-CGCA--------CGGAGAACGC--ACGGTGA----A---CAA--C--GA----AC--------GCAAA-----GTGA--ACTG--A---AACGCAC----GAAA---CACGGTG-A-CG-A--CG---GAAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGACT
Reference ( family-1839 ) : ACAAGCACGGTGAACGCACGCAGAGCGAA--CGGTG--A-C-GCACG---C-----------TGAACG-C-A-AT--------TTG-GTGAA---CGGTGAA-CGCA--------CGGAGAACGC--ACGGTGA----A---CAA--C--GA----AC--------GCAAA-----GTGA--ACTG--A---AACGCAC----GAAA---CACGGTG-A-CG-A--CG---GAAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGACT
gi|1 : ACAAACA--GTGAATGCATGAAGAGCAAA--CAATG--A-CCGCTCT---G-----------TGAACGGCGA-ATGTGAGTGGTTG-GTGAA---TAGTAAA-CGCAAAACTGAACAGACAACGC--ATGGTTA----ATGCCAA--GA-GG----AT--------GCACA-----GTGA--ACAA--AG--AATGAGC-----AAA---CA---------------G---GCAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGAC
gi|10 : aA--------TGGTGAATGC--ATGATGAT---G---CA------GA----GC--------GCAAG-----GTGA--A-TG--T---A---TAT----AGAG---CAT----------A--CG---GAAA-AATGG-TATA-GCAGAACG-T-CTCAAGGACTcga
gi|11 : GAGAACGC----GGTGA----A---CAA--TCTGA----AT--------G-AAA-----ATGA---CTG--A---AACGCA-------------------------A--CG---GAAAGAATGG-TAAA-GTAGAACGAT-TTTAGGGg
gi|13 : A-AGTGG-TAAA-GAAGATCA-T-TTCAGGAACTctg
gi|13 : CG-C-A-AT--------TTG-GTGAGGGTTGGTGAA-CGCgaacgtgtagtgagggtgctcgcaatttggtgagggttggtgaacgc
gi|15 : agttcctgaaatgatcttctttaccacttgaacgtgtagtgagggtgctG-TAAA-GTAGAACG-T-TTCAGGGACT
gi|16 : atttacaggttataattggggcaaaatatttacatgttacA-AATGG-TAAA-GTAGAACG-T-TTTAGGGACT
gi|18 : -GTAGAACG-T-TTCAGGGACTgcacaagtccttaac
gi|19 : gtgtatatacatatac-A--CG---GAAA-AATGG-TAAA-GTAGAACA-T-TTCAGGCAC
gi|2 : ACAAGCACGGTGACCGCACGCAGAGTGAA--CAGTG--A-CTGCACG---C-----------TGAACG-C-A-AT--------TT--GTGAA---CTGTGAA-CGCA--------CGGAGAACGC--ACGCTGA----A---CAA--T--GA----AT--------GAAAA-----AT-A--ACTA--A---AACGCACCGCAGAAA---CACGGTG-ACCG-A--CG---GAAA-AATGG-TAAA-GTAGAACA-T-TTCAGGGACT
gi|21 : G-TAAA-GTAGAACA-T-TTCAGGGACT
gi|22 : cattttacAA-GTAGAACG-T-TTCAGGGACT
gi|23 : tcatgtgttacAAA-AATGG-TAAA-GTAGAACA-T-TTCAGGGACT
gi|25 : AA-AATGG-TAAA-GTAGAACG-T-TTCAGGGA
gi|3 : --A-T-GCACGGTAC-----------TGACCG-C-CTAT--------TTGCGTGAA---CAGTGAAACGCA--------CAAGTACCGC--ACGCTGA----A----AA--T--AA----GCTTTGGATTGAAAA-----ATGA--ACTT--ATATAACGCACT---G------CATGGTG-C-CGCATTCGTTAGAAA-AATGGGTAAAAGTAGAACG-TATTTAGGt
gi|4 : tgaccGCACGATGAACGTATGGTGAGTGAA--AGG---------CA-------------------AACG-C----T--------CTG--TAAA---CGGTGAA-CGC-------------GAGCGT--TCGGTGC----A---CGG--C--AA----AA--------GCAAAACTGCGTGC--A-TGGTG---AATGCACT---TAAAGTCCACAGTG-AGTG-T--TG---GGAA-AATGT-TAAA--------G-T-TTCAGGGACTac
gi|5 : aaacACAGTGAGTGCATGCAGAGTGAAAGCAGT---A-C-ACACA---G-----------TGAGCG-T-A-AT--------TTG-GTGAG---CTGTAGG-TGAA--------CGGTAACCGC--ACAGTAAGCTCA---CAA--T--GA----AC--------Gg
gi|6 : tacagtccctgaaacatttttgccacttgaaccgtgatgcaaaacgaGAA--CGTTG--A-A---ATG---C-----------TGAACG-C-ACAG--------TGA-GTGAC---CGGTAAA-CGCA--------CACAGAACGA--A---TGA----T---TAG--C--GC----AC--------GCAGA-----GCGAACACTG------AACGCA
gi|6 : cattccctaaaacactctacgttacatcttCGGTAAACGCACACAGAACGAA--TGATT--AGC-GCACG---CAGAGCGAACACTGAACG-C-A-AT--------TTG-GTGAG---CGGTatttggtgagcggttggcaa
gi|7 : cattccctaaaacactctacgttacatcttgaacgttgaaatgctgaacgcacagtgagtgacGAGCGAA--CGGTGTTA---GAACG---C-----------TGAACG-C-A-AT--------TTC-TTGAA---CGAT----------------TGGGGAGCGCAAATGGAGA----G---CAAACC--AA----GC--------GCAAT-----GTGA--ACtggcaa
gi|8 : tacagttcttgaaacgttcttcttttccactcgaaatgtAA--CGGTGC-A-C-GCATA---G-----------TGAACG-C-A-AT--------TTG-GTGAA---TGCAGAA-CGCGAT------TGGAG--CGC--AGTGTGA----A---Cgat
gi|9 : acagtccctgatacgttatttaccccttgtaaggtgactaC--ACG-TGA----A---AAA--T--GACTAAAC--------GCACA-----G-----ACCG--C---CACGC-T----GAG----CATGGTGGA-CA-A--CG---GAAA-A-TGG-TAAA-GT-GAACG-T-TTCAGGGCCT
blockSeqs : AG TAGCGCACGCAGAGCGAACAC . CT . C GGT A GAT T A AAAT A AAATAAGCTTTGGATT C ACTGC AC C GTGAATGCACTTAAAGTCCACAGTGAGTGT TTA G G A A A
blockSeqs : . GACTGCACGC . AC . . . . A A A AT G GCTCACAATGAAC A . . C AAACGCACCGCAGAAACACGGTGACCGA . . . . . .
blockSeqs : . GTTAGAACGC . A . . . . A A A AC C AAAATGACTAAAC A . . C ATATAACGCACTGCATGGTGCCGCATT . . . . . .
blockSeqs : . GCACGCATAG . A . . . . A G C AC C ACAATCTGAAT C . . C CCACGCTGAGCATGGTGGACAA . . . . . .
blockSeqs : . ACACACAG . A . . . . A T G TC G GCAAACCAAGC C . . C TATATAGAGCATA . . . . . .
blockSeqs : . GAAATGC . A . . . . A A C AC G ACAATGAAT C . . C AAACGCAA . . . . . .
blockSeqs : . CA . A . . . . . G A AG G ACGGCAAAA C . . . . . . . . .
blockSeqs : . A . . . . . A G AC G TTAGCGCAC . . . . . . . . .
blockSeqs : . . . . . . . A . TGCAGAGC . . . . .
blockSeqs : . . . . . . .
blockSeqs : . . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqCons : A** ******** A******** ACAACGAAC*********************** ATAACGCACTGCAGAGCATGGTGCGA**************
originalCons : ACAAGCACGGTGAACGCACGCAGAGCGAA--CGGTG--A-C-GCACG---C-----------TGAACG-C-A-AT--------TTG-GTGAA---CGGTGAA-CGCA--------CGGAGAACGC--ACGGTGA----A---CAA--C--GA----AC--------GCAAA-----GTGA--ACTG--A---AACGCAC----GAAA---CACGGTG-A-CG-A--CG---GAAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGACT
finalCons : ACAAGCACGGTGAACGCACGCAGAGCGAA--CGGTG--A-C-GCACG---C-----------TGAACG-CA--AT--------TTG-GTGAA---CGGTGAA-CGCA--------CGGAGAACGC--ACGGTGAACAACGAAC-----------------------GCAAA-----GTGA--ACTGATAACGCACTGCAGAGCATGGTGCGA--------------CG---GAAA-AATGG-TAAA-GTAGAACG-T-TTCAGGGACT
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ACAGTTCCTGAAATGATCTCTTTACCACTTGAACGGTGAGTGAAGGGTAGCTCGCAATTTGGTGAGAGGGTTGGTGA
Unaligned ( gi|14 ): GAGATACAGTCCCCGAAACATTCTTCTTTCCCACTTGCAATGGTGAGCACCACACAAAGTATACGCAGAGT
Unaligned ( gi|17 ): ACCACATGCAGAACGCACCGGACCGTCTGAACATGAAT
Unaligned ( gi|20 ): ACAGTGGTACAATCTCCTGAAACCGTTCTACTTT
Unaligned ( gi|24 ): CACTTCATTTTATAATATTACATTTTCAACA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 444444444444444444444444444 111 11111111 222222222 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
lowQualScore : 66 000000000000000000000000000 4 000 44444444 4 777 0 4 333333333 1 1 6666 2 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 3 3 2 2 2
lowQualScore : .. ........................... . ... ........ . ... . . ......... . . .... . ................................................................................................ . . . . .
lowQualScore : 99 777777777777777777777777777 0 333 55555555 0 000 9 4 000000000 6 2 3333 8 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 3 3 9 5 5
consensus : ACAAGCACGGTGAACGCACGCAGAGCGAA--CGGTG--A-C-GCACG---C-----------TGAACG-C-A-AT--------TTG-GTGAA---CGGTGAA-CGCA--------CGGAGAACGC--ACGGTGA----A---CAA--C--GA----AC--------GCAAA-----GTGA--ACTGAT-A--ACGCACT-CAG-AG--CACGGT--G--CGAC-------GGAAA-AAT-GGT-AAAGTAGAACG-T-TTCAGGGACT
Reference ( family-1839 ) : ACAAGCACGGTGAACGCACGCAGAGCGAA--CGGTG--A-C-GCACG---C-----------TGAACG-C-A-AT--------TTG-GTGAA---CGGTGAA-CGCA--------CGGAGAACGC--ACGGTGA----A---CAA--C--GA----AC--------GCAAA-----GTGA--ACTGAT-A--ACGCACTGCAG-AG--CATGGT--G--CGAC-------GGAAA-AAT-GGT-AAAGTAGAACG-T-TTCAGGGACT
gi|1 : ACAAACA--GTGAATGCATGAAGAGCAAA--CAATG--A-CCGCTCT---G-----------TGAACGGCGA-ATGTGAGTGGTTG-GTGAA---TAGTAAA-CGCAAAACTGAACAGACAACGC--ATGGTTA----ATGCCAA--GA-GG----AT--------GCACA-----GTGA--ACAAAG-A--ATG---------AG--CA----------AACA------GGCAA-AAT-GGT-AAAGTAGAACG-T-TTCAGGGAC
gi|10 : aA--------TGGTGAATGC--ATGATGAT---G---CA------GA----GC--------GCAAG-----GTGA--A-TG-T-A--------TATAG-AG--CAT----------AC-------GGAAA-AAT-GGT-ATAGCAGAACG-T-CTCAAGGACTcga
gi|11 : GAGAACGC----GGTGA----A---CAA--TCTGA----AT--------G-AAA-----ATGA---CTGA--A--ACGCA------------------------AC-------GGAAAGAAT-GGT-AAAGTAGAACGAT-TTTAGGGg
gi|13 : A-AGT-GGT-AAAGAAGATCA-T-TTCAGGAACTctg
gi|13 : CG-C-A-AT--------TTG-GTGAGGGTTGGTGAA-CGCgaacgtgtagtgagggtgctcgcaatttggtgagggttggtgaacgc
gi|15 : agttcctgaaatgatcttctttaccacttgaacgtgtagtgagggtgctGT-AAAGTAGAACG-T-TTCAGGGACT
gi|16 : atttacaggttataattggggcaaaatatttacatgttacA-AAT-GGT-AAAGTAGAACG-T-TTTAGGGACT
gi|18 : GTAGAACG-T-TTCAGGGACTgcacaagtccttaac
gi|19 : gtgtatatacatatacAC-------GGAAA-AAT-GGT-AAAGTAGAACA-T-TTCAGGCAC
gi|2 : ACAAGCACGGTGACCGCACGCAGAGTGAA--CAGTG--A-CTGCACG---C-----------TGAACG-C-A-AT--------TT--GTGAA---CTGTGAA-CGCA--------CGGAGAACGC--ACGCTGA----A---CAA--T--GA----AT--------GAAAA-----AT-A--ACTAA--A--ACGCACCGCAGAAA--CACGGT--GACCGAC-------GGAAA-AAT-GGT-AAAGTAGAACA-T-TTCAGGGACT
gi|21 : GT-AAAGTAGAACA-T-TTCAGGGACT
gi|22 : cattttacAAGTAGAACG-T-TTCAGGGACT
gi|23 : tcatgtgttacAAA-AAT-GGT-AAAGTAGAACA-T-TTCAGGGACT
gi|25 : AA-AAT-GGT-AAAGTAGAACG-T-TTCAGGGA
gi|3 : --A-T-GCACGGTAC-----------TGACCG-C-CTAT--------TTGCGTGAA---CAGTGAAACGCA--------CAAGTACCGC--ACGCTGA----A----AA--T--AA----GCTTTGGATTGAAAA-----ATGA--ACTTAT-ATAACGCACT------G--CATGGT--G--CCGCATTCGTTAGAAA-AATGGGTAAAAGTAGAACG-TATTTAGGt
gi|4 : tgaccGCACGATGAACGTATGGTGAGTGAA--AGG---------CA-------------------AACG-C----T--------CTG--TAAA---CGGTGAA-CGC-------------GAGCGT--TCGGTGC----A---CGG--C--AA----AA--------GCAAAACTGCGTGC--A-TGGTGA--ATGCACT-TAA-AGTCCACAGTGAG--TGTT-------GGGAA-AAT-GTT-AAA-------G-T-TTCAGGGACTac
gi|5 : aaacACAGTGAGTGCATGCAGAGTGAAAGCAGT---A-C-ACACA---G-----------TGAGCG-T-A-AT--------TTG-GTGAG---CTGTAGG-TGAA--------CGGTAACCGC--ACAGTAAGCTCA---CAA--T--GA----AC--------Gg
gi|6 : tacagtccctgaaacatttttgccacttgaaccgtgatgcaaaacgaGAA--CGTTG--A-A---ATG---C-----------TGAACG-C-ACAG--------TGA-GTGAC---CGGTAAA-CGCA--------CACAGAACGA--A---TGA----T---TAG--C--GC----AC--------GCAGA-----GCGAACACTG---A--ACGCA
gi|6 : cattccctaaaacactctacgttacatcttCGGTAAACGCACACAGAACGAA--TGATT--AGC-GCACG---CAGAGCGAACACTGAACG-C-A-AT--------TTG-GTGAG---CGGTatttggtgagcggttggcaa
gi|7 : cattccctaaaacactctacgttacatcttgaacgttgaaatgctgaacgcacagtgagtgacGAGCGAA--CGGTGTTA---GAACG---C-----------TGAACG-C-A-AT--------TTC-TTGAA---CGAT----------------TGGGGAGCGCAAATGGAGA----G---CAAACC--AA----GC--------GCAAT-----GTGA--AC-GAT-tggcaa
gi|8 : tacagttcttgaaacgttcttcttttccactcgaaatgtAA--CGGTGC-A-C-GCATA---G-----------TGAACG-C-A-AT--------TTG-GTGAA---TGCAGAA-CGCGAT------TGGAG--CGC--AGTGTGA----A---C
gi|9 : acagtccctgatacgttatttaccccttgtaaggtgactaC--ACG-TGA----A---AAA--T--GACTAAAC--------GCACA-----G-----ACCG-------C-CAC-GCTG-AG--CATGGT--GGACAAC-------GGAAA-A-T-GGT-AAAGT-GAACG-T-TTCAGGGCCT
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ACAGTTCCTGAAATGATCTCTTTACCACTTGAACGGTGAGTGAAGGGTAGCTCGCAATTTGGTGAGAGGGTTGGTGA
Unaligned ( gi|14 ): GAGATACAGTCCCCGAAACATTCTTCTTTCCCACTTGCAATGGTGAGCACCACACAAAGTATACGCAGAGT
Unaligned ( gi|17 ): ACCACATGCAGAACGCACCGGACCGTCTGAACATGAAT
Unaligned ( gi|20 ): ACAGTGGTACAATCTCCTGAAACCGTTCTACTTT
Unaligned ( gi|24 ): CACTTCATTTTATAATATTACATTTTCAACA