lowQualScore : 111111111111111111111111111111 1111111111111111111111111111 11111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111 1111111111111111111
lowQualScore : 444 3333333 4 66666666666666666 1111 111111111 444444444444444444444444444444 11 333333 11 1 33 33 222 11111 3333333333333333333333 22222 222222 1111 1 4444 333333333 1111 33 88888888888888888888888888888888888888888888888888 3333 1111 333333333333 33333333 1 1 5555555 11 3333333333333333333333333333 111 44444444444444444444444444444444 2 33333333333333 2 5555 44 2 11111 333333 33333333 222 8888888 66666666666 11111111 1 00000000000000000000000000000000000000000000 11111 11111 1 11111 111111 111111111 111 4444444444 1111 00000000000000000000000000000000000000000000000000000000000000 1 33 11111111111111111111111111111111111111111 3 2222 11 55555 4 4 2 222 55555555 9999999999999999999999999999 3333333333333333333 2 1 22222 333333333333 111 222 22222222 3333333 1 33 1111 1111 11 44 222 333 3333333 11 44
lowQualScore : 999 77 3333333 0 5 33333333333333333 2222 5 999999999 444444444444444444444444444444 44 9 222222 6 11 8 99 0 0 6 55 6 99 5 999 8 99999 4444444444444444444444 88888 77 5 1 444444 2222 1 3333 6 66 0 5 222222222 0000 5 88 99999999999999999999999999999999999999999999999999 1 5 77 5 1 8888 7777 888 3 0 999999999999 5 11 33333333 88 0 0 66 5 4 0 4 6666666 4 4 22 6666666666666666666666666666 5555 55 333 1 4 99999999999999999999999999999999 55 55 5 2 88888888888888 0 44 7777 4 66 4 8 11 9 11111 4 111111 88888888 777 4 5555555 0 4 55 66666666666 77777777 5 55 88888888888888888888888888888888888888888888 4 88888 4 8888 4 00000 55 7 00000 999999 555555555 777 4 4 66 888 8888888888 4 8888 66 777 44444444444444444444444444444444444444444444444444444444444444 5 8 11 5 33333333333333333333333333333333333333333 1 99 6 6 6 5 5555 0 11 0 33333 0 0 0 4 3 333 22222222 6 8888888888888888888888888888 7 4444444444444444444 0 3 0 8 44444 999999999999 1 3 444 444 8 0 0 99 44444444 3 8888888 6 3 11 2222 5 5555 44 8 11 6 2 444 5 6 444 0 5555555 33 11
lowQualScore : ... .. ....... . . ................. .... . ......... .............................. .. . ...... . .. . .. . . . .. . .. . ... . ..... ...................... ..... .. . . ...... .... . .... . .. . . ......... .... . .. .................................................. . . .. . . .... .... ... . . ............ . .. ........ .. . . .. . . . . ....... . . .. ............................ .... .. ... . . ................................ .. .. . . .............. . .. .... . .. . . .. . ..... . ...... ........ ... . ....... . . .. ........... ........ . .. ............................................ . ..... . .... . ..... .. . ..... ...... ......... ... . . .. ... .......... . .... .. ... .............................................................. . . .. . ......................................... . .. . . . . .... . .. . ..... . . . . . ... ........ . ............................ . ................... . . . . ..... ............ . . ... ... . . . .. ........ . ....... . . .. .... . .... .. . .. . . ... . . ... . ....... .. ..
lowQualScore : 333 99 4444444 0 0 11111111111111111 1111 7 000000000 888888888888888888888888888888 00 3 444444 6 00 0 22 8 7 7 88 7 55 7 333 4 44444 9999999999999999999999 66666 99 7 4 666666 1111 4 8888 2 11 1 0 777777777 6666 0 88 44444444444444444444444444444444444444444444444444 3 7 99 7 4 2222 5555 888 2 1 999999999999 0 55 00000000 22 0 0 99 0 5 7 0 5555555 0 0 00 7777777777777777777777777777 6666 00 111 6 4 99999999999999999999999999999999 55 00 5 6 66666666666666 0 11 2222 4 11 4 9 77 7 11111 4 999999 11111111 555 4 1111111 7 0 55 99999999999 33333333 2 55 99999999999999999999999999999999999999999999 0 77777 0 5555 0 00000 55 8 88888 000000 222222222 888 4 4 11 444 2222222222 4 3333 11 888 00000000000000000000000000000000000000000000000000000000000000 0 6 77 7 99999999999999999999999999999999999999999 0 22 7 7 7 0 8888 8 00 8 00000 0 0 4 0 2 000 00000000 0 3333333333333333333333333333 3 3333333333333333333 0 5 5 0 00000 444444444444 0 2 000 000 0 8 8 22 22222222 3 0000000 7 3 00 1111 7 7777 11 0 22 6 8 222 6 0 333 7 0000000 33 00
consensus : ACGATTCCA-AAAA--GTCGCGCCATCGAGTTACGTCCCT-----TATTTGTGACG-TCAAACGAG-GATAGCTTTG--GC-ATCGCAC-TGTGT----GCGATAGGCAT-G--T------TCGCTTCCA----ATC------TA-T-----------TAATGATTTCCGTC-TTCAGTTCTTGATTAATTTT-GTAC-CAATTAAATA--GGAAGCGT-CAG--TTTTAAATGACTATAT-GGAGAT-TTT-ATTT-CGATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTTTGCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGT-AAAAAAA---AATTC----GCGA-TTAGGTATAAAAGTT-GTTTATTG-TACGATCAA---ATACGCAAT----GTTTTCATTTT-AT-ATCGTTTAA----A----TAATTNGATA-ACAACT-TT----------TCGAT--CAA-GATA-AA--A-ATATT-TT-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAGATATCACCAACATT-GTAAACCCTTTTTATTTGCA-AATAAN-CAT-AAAA-TT-C--AC-AAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTGGTGAAATTGACGGCGTATTTTTTT-----TTTATT-----TATTTTTTTTTTTGGATGCACGAT--ATT-T-CGTGTTGCCTGAAACA-A--A------------------T---A------TA--AAT--TACTCACCGGT----AT-GAT--T-GCAAATTT-GTCT-CTTTTA-TAC-AACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAAATGTAAGC-A-GA-CTACTA-TTATA-AAGAG-----ATTTGATT-T--GCAGTGCGGT--T-TTGGA--ACG---CGGGGGGGGGGGGGGGG--GGG-T--G--------TC--GT------CC-AGA--------CG---T-AAA-G---AAC-T----G-ACCTTTA-----CCCA--TATTTTTC--AAGCGATAG-----TGAT-G-------A---AC-G-AAG--TAAT--CCCGTTTTTTN-ATA--TA-AT----CCATT--G---TC--TGA-TTCCATTGTC--TA--ANTTCATTAAGTCA--A--TTCTAA----TGAAGTTAGATTTG-TTTGAAAATG--TTCGTAATTTGT-A------TC-T-GC-C--------CCCCGCCCCCC--CCC-TTTGCGCTCA--TT-TAA-TC-TCAGATTT-TCTGCA---GCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATANTTTAA-A-AATAT----AG-TGACGATGACTGTC-ATA-TATA---TTATTTGTTT----TAAAAAACTTCATCTCGACGTTCA-TGCA----------AAACTACATTNATTTT-CACAA--TATAGGGC-CCCAANTC-AGTTACTGC---TGGATCC-GATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCNCGAAGAA-T----TTTTCAATTA-TG-AAGT-AGATTAT----TGTT-TN---AAACTATCTAGCTA-TGTG-CAGA--TCAAACAAGTT-TTAAATTGTAGAACTTT--AAAAGTC-CGTAACCAGAAAGAGGATAG-ACTACACA
Reference ( gi|1 ) : ACGATTC---AAAA--GTCGCGCCATCGAGTTACGTCCCT-----ATTTTGTGACGATCAAACGAG-GATAGCTTTG--GCTATCACAC-TGTGT----GCGATAGGCAT-G--T------TCGCTTC------ATC------C--------------TAATGATTTCCGTA-TTCAGTTCTTGATTAATTTTTGTACGCAATTAAAAA--GGAAGCGT-CAG--TTTTAAATGAGTGTAT-GGAGA--TTT-ATTTCCGATTTCCCGTATTT-AGCAAGAAAGACCGCCTCGATCGAAGTTTTTGCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGT-AAAAAAA---A--TC----GCAA-TTAGGTATAAAAGTT-GTTTATTG-TACGATCAA---ATATG-AAT----GTTTTCATTTT-A--ATCGTTTAA----A----TAATGGGATATACAACTGTT----------TCGAT--CAA-GATA-AA--A-ATATTATTGAAAGGGAATTTATGCT----A---GAGATGCAATCGACGTCATGATCGAGATATCACCAACATT-GTAAACCCTTTTTATTTGCA-ATAAAA-CAT-AAAA-TT-C--AC-AAATCTTGAACGTTCGTATCACGCAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTAGTGAAATTGACGGCATATTTTTTT-GT-GTTTATT-----TATTTTTTTTTTTGGATGCACGAT--ATT-C-CGTGTTGCCTGAAACA-A--A------------------T---A------TA--AAT--TA-TCATCGGT----AT-GATG-TGGCAAATTTGGTCT-CTTTTAGGAC-AACTGCAAAA--CTAT-TA-GTGTACGCATGAAAGCGTGATTT-----CA-TTTTGGGAATAATC-A-TGTAAGC-A-GA-C-ACTATTTATA-AAGAGCCACGATTTGATT-T--GCAGTGTGGTTGT-TTGGA--ACG---CGGGGGGGGGGGGGAGG--GGG-T--G--------TC-AGT------CC-AGA--------GA---T-AAA-G---AAC-T----G-ACCTTTA-----CCCA--TA-TTTTC--AAGCGATAG-----TGAT-G-------A---AC-G-AAG--TAAT--CCCGTTTACTC-A-A--TA-AT----CCATT--G---TC--TGA-TTCCATTGTC--TAC-ATTTCATTAAGTCA--A--TT-TAAT---TG----CAGA-TTG-TTTGAACATG-TTTCGTAATTTGT-A------TCTTTGCGC--------CCCCACTCCCT--CCC-TTTGTGCTCA--TT-TAA-TC-TCAGATTTGTCTGCT---GCAGAA--TTTAGTTCATGTAATAAGCCATCGATGTCTCT-TTCAAAATATTTTAA-A-AATA-----AA-TGACAATGACTGT--ATATTATA---CTA--TATTTA--AAAAAAAACTTCATCTCGACGTTCATTGTACTTC-TGATCAATGTACA-TTAATTT-CACAA--T-TAGGGCCCCCAACTC-TGTTACTGC---TGGAT-C-GATGGAAGCT-AATTATTTTTCAACCTG--GAA--------AGTACCACGAAGAA-T----CTTTCAATTA-TG-AAGTAAGATTAT----TGTT-TT---AAACTATCTAGCTA-TGTG-CAGAG-TCAATCGAGTT-TTAAATTGTAGAACTTTAAAAAAGCC-ATTAA-CAGCAAGAGGATAACACTACACA
gi|2 : ACGATTCCA-AAAA--GTCGCGCCACCGAGTTACGTCCCT-----TATTTGTGACG-TCAAATGAG-GATAGCTTTG--GC-ATCACAC-TGTGT----GCGATAGGCAT-ACAT------TCGCTTCCA----ATC---------------------TAATGATTTCCGTA-TTCAGTTTCTGATTTATTTT---AC-CAATTAAATA--GGAAGCGTTCAGGTTTTTAAATGACTATAT-GGAGA--TTTTATTTC-GATTTCCCGTATT--AGCAAGAA---CCCCCTCGATCGAAGTTTT-GCTATG-------AC-AGA--------TTTGGAATGCTTG----AAATGCAGTCA--TAGGG----AAAAA---A--TC----GCGA-TTAGG-GTAAA-GTT-GTT-ATTGATACGATCAA---ATATGCAAT----TGTTTCATTTT-ATAATCGTTTAA---------TAATTG-ATA-ACAACT--T----------T--AT--CAA-GATA-AA--A-ATATCAT--AAAGGGAATATATGCT----A---GAGATGCA-TCGACGTCATGA--GAGAT--CACCAACATTTGTAAACCCTTTTTATTTGCA-AATAAA-CAT-AAAAATT-C--ACCAAATCTTGAACGTTCGTATCACGCAT-TTGGATGTTATGTATAG---TA---TTTATGAA-TTACTC-CGT-GT-AAATTGACGGC-TATTTTTTT-TA-GTTTATT-----T-------TTTTTGGATGCACGAT--ATT-T-CGTGTTGCCTGAAACA-A--A------------------T---A------TA--AAT--TACTCATCGGT----AT-GAT--T-GCAAATTT-GTCTGCTTTTA-TAC-AACTGCAAAAACTTAT-TAGGTGTAC-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAA-TGTAAGC-A-GA-CTACTA-TTATA-AAGAGCCACGATTTGATT-T--GCAGTG-----GT-TTGGA--AC----CGGAGGGGGGGGGG-------------------------GT------TC-AA---------------------------------G-ACGTTTA-----CCCA--TATTTTTC--AAGCGATAG-----TGAT-G-------A---ACGG-AAG--TAAT--CCCGTTTTATCAA-A--TA-AT----CCATT--G---TC--TGA-TTC-----------------CATTAAGTCA--A--TT-TTAA---TGAAGTTAGT-TTG-TTTGAA-ATG--TTCGTAATTTGTAA------TCTT---GT--------CCTCCCCCCTT--CCCTTTTGTGTTCA--TT-TAA-TC-TCAGATTT-TCT-CTCTAGC-GAA--TTTAGTTCATGT-AT-AGCCATC-ATCTCTCTATTCAA
gi|9 : acACGATTCCA-AAAA--GTCGCGCCATCGAGTTACGTCCCT-----TATTTGTGACG-TCAAACGAG-GATAGC--------------A---GTGT----GCAATAGGCAT-G--T------TCGCTTCCA----ATC------TACTCATTAAAATATTAATGATTTCCGTC-TTCAGTTCTTGATTAACTTT-GTA-ACAATTAAATA--GGAAGCGT-CAG--TTTTAAATGACTATAT-GGAGAT-TTT-ATTT-TGATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG--ACAGCTAC-------GAC-AGA--------TTTGGAATGCTTGTTACAAATGCA--CGATTAGGGT-AAAAAAA---AATTC----ACAATTTGGGT---AAAGTT-ATTTATTG-TACAATCAATTTACAC--AAT----GTTTTCATTTT-AT-ATCGTTTAA----A----TAAC-TGATATACAAC--TC----------TCGAT--CAA-GCTA-AA--A-ATATT-TT-AAAGGGAATTTATACT----A---GAGATGCGATCGACGTCATGA--GAG--ATCACCAACATT-GTAAACCCTTTTTA
gi|10 : acACGATTCCA-AAAA--GTCGCGCCATCGAGTTACGTCCCT-----TATTTGTGACG-TCAAACGAG-GATAGC--------------A---GTGT----GCAATAGGCAT-G--T------TCGCTTCCA----ATC------TACTCATTAAAATATTAATGATTTCCGTC-TTCAGTTCTTGATTAACTTT-GTA-ACAATTAAATA--GGAAGCGT-CAG--TTTTAAATGA-TATAT-GGAGAT-TTT-ATTT-TGATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG--ACAGCTAC-------GAC-AGA--------TTTGGAATGCTTGTTACAAATGCA--CGATTAGGGT-AAAAAAA---AATTC----ACAATTTGGGT---AAAGTT-ATTTATTG-T-CAATCAATTTACAC--AAT----GTTTTCATTTT-AT-ATCGTTTAA----A----TAAC-TGATATACAAC--TC----------TCGAT--CAA-GCTA-AA--A-ATATT-TT-AAAGGGAATTTATACT----A---GAGATGCGATCGACGTCATGA--GAG--ATCACCAACATT-GTAAACCCTTTTTA
gi|17 : cACGATTCCA-AAAA--TTCGCGCCATC---------CCTT-----ATTT-GTGACG-TCAAACGAG-GATAGCTGTG----TA-GAAAC-TGCGTTACAGCGATAGGCAT-G--TTATAAATTAC-TC------ATTAAAATAT--------------TAATGATTTCCGTT-TTCAGTTCTTGATTAA-CTTTGTAC-CATTTA
gi|7 : gtatacCGATTCCAAAAAA--GTCGCGC-ATCGAGTTACGTCCCT-----TATTTGTGACG-TCAAACGAGCGATAGCTT-G--GC-ATCACACCTGT-T----GCGATAGGCATAG--T------TCGCTCC------AAT------C--------------TAATGATT-CCGTACTTAAGTTCTTGATTAATTTTGTTAC-CAATTAAAAAACGGAAGCGT-CAG--TTTTAAATGAGTGTATTGGAGAATTTT-ATTTC-GATT-CCCGTATTT--GCA-GAAAC-CCGC-TCG--TGAAGTTTT-GCTACG-------AC-AGG--------ATTGGAATGCTTG----AAATGCA--CGATTAGGGT-AAAAAAA---AATTC----GCAA-TTAGG-ATAAAAGTTCGTTTATTG-TACGATCAA----TATGCAAT----GTTT-CATTTTTAGTATCGTTTAA----A----TA-TTTGATA-ACAACC-TT----------TCGATATCAAAGATA-AA--ATATCTTAT--AAAGGGAATTTATGCT----A---GAGATGCAATCGACGTCATGATCGAGATATCACCAAC-TG-GTAAACCC-TGTTATTTGCA-AAATAA-CATAAAAA-TT-CCAAC-AAATCTTGAACGTTCGTATCACGCAT-TTGGAT-TTATGTATAG---T---ATTTATGAATTTACAT-CGTAGTGAAATTGACGGC-TATTTTTTT-TTAGTTTATT-----T-TTTTTTTTTTTGGATGCACTA---ATTAC-CGTGTTGCCTGAAAAAGA--A------------------T---A------TA--AAT--AC-TCATCGGTA---AT-GAT--T-GCAAATT--GTCT-CTT
gi|28 : GATTCCA-AAAA--GTCGCGTCATCGAGTTACGACCCTTATTTATTTTGTGACG-TTAAACGAG-GATAGCTTTA--GC-ATCGCAC-TGTGT----GCGATAGGCAT-G--T------TCGCTTC------
gi|19 : GATTT---AAAAAAGTCGCGACATAAAGTTACGTTCCT-----TATTTGTGACG-TCAAACGAG-GATAGCT
gi|25 : ttttccgaaatcataaaatattttgtaggtatcccttttaaggtctcctgacatcagtacaattgtcaatggtgtagcaaacatgacataTCAAACGAG-GATAGCTGTGTAGAAATTGCAT-TACG-----GCGATAGACAT-G--A------TCGCTTCTCATTTACT------CAATG----------TAATGATTTCCCTC-TTCAGTTCTTGATTAA-CTTTGTACG-AATT
gi|15 : gTCAGTTCTTGATTAATTTT-GTAC-CAATTAAAAA--GGAAGCGT-CAG--TTTTAAATGAGTGTAT-GGAGAT-TTT-ATTT-CGATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG-TTTTGCTAC-------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAAAAAA---A--TC----GCAA-TTAGG-AT-AAAGTT-GTTTATTG-TACGATCAA---ATATG-
gi|5 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--TTTTGAATGCCTATCT-GGAGAC-TTT-ATTTA-AATTTCACGTATTTTAGCAAGAAAACCCGCCTCGA-----GGTTTTGCTCCG------GATTAGGGTAAAACTTTTGGAATGATC-------ATGCA--CGATTAGGAT-A---AAT---A--TTTTTTGCGA-TTA-----------------ATTG-TACGATCAA---ATACGCAATATTTGTTTTTATTTT-A----CATCTCATCTTA----TAATTGG-TACAAAACT--T----------TC-AT--------TA-AA--G-CT----TT-AAAGGTAATTTGTCCT----AACAGAGATGCGA--------------------TCATCAAAATT-GCAAGCCATTTTTATTTGCATAT-----CAT-AAAA-TTTC--CC-AAATCTTGAACGTTCG-ATCACGTGT-TTGGATGATATGTAT-----------TTATGAA-TGGCTC-CGGGGTGAAATTGACGGCG-ATTTTTTT------------------------------AATGCACGAT--ACT-G-CGTTTTGCCTGAAACA-ATCA------------------CTTGA------TA--AAGGATA-TCA-CAA-----AC-G-----GGTACATTTG------TT---------ACT---AAA--CTAT-CA-GTGTAT-CATGAAA-CATGATTC-----CA-TTTTGGGTATGTTCAA-TATAAGCTA-GA-CTACTA-TTATA-AAGAG------TTTAATT-T--GCA--GTGGT-------------G---TAGGGGGGGGGGGG-GG--GGG-T--GACCTTC--CC-AAT------CA-AAA--------CAG--T-AAA-A---AA-------G-AATTTT-------TTA--TT-TTTTC--AACCGATAGTGTTTTGAT-ATTCGGTCA---AC-G-AAG--TAAG--CCCGCTT-TTT-G-ATTTA-TT----TCATC--G---CCTATGATTTCCACCGTC--T-T-AATTCATTGA-------------AAT---TA----------TG-TATGA--ATG--TTCATAATTTGT-A------GCGTTGCCC--------CCc
gi|13 : T-AGCAAGATAGCCCGTCTCGA-----ATTTTTGCTGCGCATTGGGGT-AAACAT-----TTTCGAATGTTT-------ATGTG--GGAGTAAGGT-AAGGCTTTTTA--TC----GCGA-TTAGG-GTAAA-GTT-ATTTATTG-TACCATCAA---CTATGCAAT----TCTTTGATTTT-AT-ATCATCTAA----A----TGA--------------GT----------------------GATA-GA--A-A-ACT-TT-AAAGGGAATTCACGCCTAGCA---GAGATGCA-TCGATG-CA-----AAGATA--ACCAATATT-GTAAACC---TTTATTTGCA--TATAATCAT-AA----------C-AAATCTTGAACGTT-GTATCACGTAT-TTGGATGTTATGTACAA---AAC-ATT-ATTAA-TTACTC-CG-----ACATTGTAGGCG--------------------------ATTTTTTCTT---GATGCACGATAAATA-CGCCTGTTGTCTG
gi|32 : AGGTA---AAGTT-ATTTATTG-TACGATAAA---A-ATGCAAT----GCTTTCATTCT-CT-ATAATTTAA----G----T
gi|22 : taACGATCAA---ACATACAAT----GTTTTCATTTT-AT-ATCGTTTCA----AGCTTTAAAGGGA---ATAGTTGTTAGAGATGCAATCGAC--GTA-GATATAACCA-ATATTGTTAA
gi|22 : agtaTTTAAAGGGAATAGTTGTT----A---GAGATGCAATCGACGT--------AGATATAACCAATATT-GTTAACCTTTTTTATATGCA-ccttttttatatgcata
gi|18 : agtaacgatcaaacatacaatgttttcattttatatcgtttcaagcATTTATGCTCT--A---GAGATGTGATCGACGTCATGA--GAGAT--------CA--------CCCTTTATATTTGGA-AATAAT-CAT-AAAAATT-C--AC-AAATCTTGAACATTTGTATCACGTAT-TTGG-----GTGTATAG-----A-ATTTATGAA-TTAGGC-CGTGGTGAAATTGACGGC-TACTTTTTT-ta
gi|4 : TGCA-AATAAT-CA--AAAA-TT-C--AC-AAATCTTGAACGTTCGTATTACGTAT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TATT--------------TT-----TATTTTTTTTGTTGGATGCACGAT--ATT---CGTTTTGCCTGAAACA-A-------------------------A------TA--AAT--TACTCACCGGT--------ATA-TTGCAAATTT-GTCT-CTTTTA-TAC-AACTGCAAAA--CTAT-TA-GTGTA--TATGAA--CGTGATTT-----CA-TTTT-GGAATATTCAA-TGTAAGCAA-GA-CTACTA-TTATA-AAGAG------TTTGATT-T--GCA--GCGGT--T-TTGGA--AC----CGGGGGGGGGGGGGGGG--GGG-A--G--------T----T------CA-AGA--------CG---T-AAA-G---AAC-T----G-ACCTTTA-----CCCA--TATTTTTC--AAGCGATAG-----TGAT-G-------A---AC-G-AAG--TAATC-CCCGTTTTTTA-ATA--TA-AT----CCATT--G---TC--TA--------TG--------ATTTCATTAAGTCA--A--TTCTAA----TGAAGTTAGATTTG-TTTGAAAATG--TTCGTAATTTGT-A------TT------C--------CCCCGC------------TTGCGCTCA--TT-TAA-TC-TCAGATTT-TCTGCA---GCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATAATTTAA-ACAATAT----AG-TGACGATGACTGTC-ATA-TATA---TTATTTGTTT----TAAAAAACTTCATCTCGACGTTCA-TGCA----------AAACTACATTTATTTT-CACAA--TATAGGG--CCCAACTC-AGTTACTGC---TGGATCC-GATGGAAGCT-AATTA-TTTTCAGCCTG--GAA--------AGTACCACGAAGAT-T----TTTTCAATTA-TG-AAG-AAGATTAT----TGTT-TA---AAACTATTTAGCTATTGTG-CAGA--TCAAACAAG-T-TTAAATTGTAGAACTTT--AAAAGTC-CGTAACCAGAAAGAGGATAG-ACTACACAt
gi|3 : TGCA-AATAAT-CA--AAAA-TT-C--AC-AAATCTTGAACGTTCGTATTACGTAT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TATTT---------TTTA----------TTTTTTTGTTGGATGCACGAT--ATT-T-CGTTTTGCCTGAAACA-A-------------------------A------TA--AAT--TACTCACCGGT----AT-GAT--T-GCAAATTT-GTCT-CTTTTA-TAC-AACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAA-TGTAAGCAA-GA-CTACTA-TTATA-AAGAG------TTTGATT-T--GCA--GCGGT--T-TTGGA--A------GGGGGGGGGGGGGGGG--GGG-A--G--------T----T------CA-AGA--------CG---T-AAA-G---AAC-T----G-A-CTTTA-----CCCA--TATTTTTC--AAGCGATAT-----TGAT-G-------A---AC-G-AAG--TAATCCCCCGTTTTTTA-ATA--TA-AT----CCATT--G---TC--TA--------TG-----A----TTCATTAAGTCA--A--TTCTAA----TGAAGTTAGATTTG-TTTGAAAATG--TTCGTAATTTGT-A------T----------------------TCCCG--CC---TTGCGCTCA--TT-T-A-TC-TCAGATTT-TCTGCA---GCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATAATTTAACA-AATAT----AG-TGACGATGACTGTC-ATA-TATA---TTATTTGTTT----TAAAAAACTTCATCTCGACGTTCA-TGCA----------AAACTACATTTATTTT-CACAA--TATAGGG--CCCAACTC-AGTTACTGC---TGGATCC-GATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGAATT----TTTTCAATTA-TG-AAG-AAGATTAT----TGTT-TA---AAACTATTTAGCTATTGTG-CAGA--TCAAACAAG-T-TTAAATTGTAGAACTTT--AAAAGTC-CGTAACCAGAAAGAGGATAG-ACTCCACA
gi|23 : AT-AAAA-TTTC--AC-AAGTCTTGAACGTT-GTATGACGTAT-TTGGACGTTATCTATAG-----A-ATTTATTAA-TTACTC-CGTGATGCCATTGGCGACG-ATTTTTTT------------------TTCTT-------GATGCACGAT--ATT-
gi|12 : CGCATATTGGATGTTATGTACAG-----A-ATTTATGAA-TTACTTGCG-GGTGAA-TTTATGGCG--------------------------ATTTTTTCTCTTA-AT-CACGAT--ATG-C--GTGTTGCCTGAAACA-A--AGGAAATCACAAACGTGGGT---A------CAGTAGT--TA-TTCTTAAT----TT-TATGATTGCAAAATTTGTCC-CTTTTAT-AC-AATTGTAAAA--CTGT-CA-GTGT---CATGAAAACGTGATTT-----CAATTTTGGGAATGTTC-AATGTATGC-TTGA-CTGCTATT-ATA-AAGAA-----ATTT-ATT-TTTGCAGTG-----GTGTTGGA--ACG---CGGGGGGGGGGGTAAGGTCGGACT--GAGACGACCCC-CAT------AC-AAA--------GAGCGT-AAA-GTT-AAT-T----GTACCGTTACCTCGCCCACTCG-TTTTC--------TAG-----TGTTCG-------AATCAC-GTAAG--TTAG--TCCTTTTA--T-A-A--TA-GTC---CCATTGCG---TA--TGATTTCCATAGTC--C-T-AATTCATTTAATCA--ATTTT-TAAA---TG----C--G-TTG-TT
gi|8 : AT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TATTTTTT------------------ATTTTTTTTGTTGGATGCACGAT--ATT-T-CGTTTTGCCTGAAACA-A-------------------------A------TA--AAT--TACTCACCGGT--------ATA-TTGCAAATTT-GTCT-CTTT--ATAC-AACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAA-TGTAAGCAA-GA-CTACTA-TTATA-AAGAG------TTTGATT-T--GCAG---GGT--T-TTGGA--ACC---GGGGGGGGGGGGGGGGG--GGG-G--G--------GG-AGT------TCAAGA--------CG---T-AAA-G---AAC-T----G-ACCTTTA-----CCCA--TATTTTTC--AAGCGATAG-----TGAT-G-------A---AC-G-AAG--TAATCCCCCGTTTTTTA-ATA--TA-AT----CCATT--G---TC--TA--------TG--------ATTTCATTAAGTCA--A--TTCTAA----TGAAGTTAGATTTG-TTTGAAAATG--TTCGTAATTTGT-A------TT------C--------CCCCGC------------TTGTGCTCA--TT-TAA-TC-TCAGATTT-TCTGCA---GCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATATGT------AATA-----GA-T
gi|31 : TTTTTTTAGT--TTTATTATCATTATTTTTTTTTT--GATGCACGAT--ATT-T-CGTATTGCCAGAAACA-A--A------------------T---A------TA--AAT--TACTCACCGGT----AT-GAat
gi|30 : tTTTTTTTTTTTGGATGAACGTT--ATT-T-CGTGTTGCCTGAAACA-A--A------------------T---ATAGGCCTA--AAT--TACTCACCGGT----AT-GAT--T-GCAAATTT
gi|26 : ttttttttggggggt--A------------------T---A------TA--AAT--CATTTATC--T----AC-GAT--TGGAGAATT--GACA-CTTTGA-TAC-AACTGTTAAC--CTATATATCTGTAT-CACGAAAA-GTGATTTTTTTCTA-TTTTGG
gi|11 : aaacggggAT--TA-TCATTTATTTTAAT-ATTA-TTGCAAATTTG-TCA-CTTT----------------A--CTAT-CA-GTGTAC-CATGAAA-CATGATAT-----CA-TTTTGGGAATGTTC-AATGTAAGCTA-GAAT-ACTAG--ATT-AAGA------ATTTTATT-T--CCA-T-TGGTC---TTGGA--CCG---TGGGGAGGGG----AGG--GGG-TTGA--------TC-CTTACCCACCC-ACACCACCCCTAA---C-AAA-ACATAAC-TTACTG-ACCTTTA-----CCCA--CC-TTTTC-----------------GAT-C-------A---AG-C-AAG--TAA---GCCGTTC-TTT-A-A--TATATCGGGCCACT--G---CC--TAG-ATGTATTCTCATTACTAATTCACTTAATCAATA--TT-TAATAAGTT----AAAT-TTG-TTTAAAAATGATGTTGTATTTTGT-AACACCCCCCCCGCACTCCCACCACCCCACCCACC--CCC-CATGTG-TTA--TTGTAATTT-TCGGATTTatatcca
gi|6 : ggagatgcgatcatgACCGGT----ATTGAT--TG-CAAATTTTGTCT-CTTT----ATTAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTAATTT-----CA-TTTTGGGAATA-TC-AATGTAAGC-A-AG-T--CTACT-ATATAAGAG------TTTGATTAT--GCAGT-TGGGT-T-TTGGAGGAAA---CGGGGTGGGGGGGG--G--GGG-T--G--------T----T------TC-AGA--------CG---TCAAA-G---AAC-T----G-ACCTTTA-----CCCA--TG-TTTTTCAAAGCGATAAGTT--TGAT-G-------A---AC-G-AAAGTTAAT--CCTGCTTTTTC-ATAT-TA-ATC---CCATT--GATTTT--TGA-TTTCACTGTC--TAA-TTTTCATTAAGTCA--AATTT-TAA----TGAAGTTAGATTTGTTTTGAAAAT--TTTCG-AA-TTGT-A------TCATTGCCC--------CCCCCCCCCCCCACCT-TTTTTGCTCACCTT-TAA-TCTTCAGATTTTTCTGCA---GCAGAATTTTTAGTTC-TGT-ATA--CCACC-ATGT-TCTATTCAAATAATTTTAA-C-AATATGTACAGTTGACGATGACTGTCAATATTATATATTTA--TATTTGTTTTAAAAAACTTCATCTCG-CGTTCA-TGTAC--CGTGATCAATCTACA-TAATTTT-CACAAACA-TAGGGCCCC----------------------AC-C-GATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------ATTACCACGAAGAATT----CTTTCAATTA-TGAAAGT-AGATTAT----TATT-TT---AAAATATCAAGTTA-TGTGACAGAATTCAAACAAG----TAAATTGTAGAACTTTAtcccagggagatttcagaatatattatgtttctaactaaagaattaaacaa
gi|29 : TTATA-AAGA------ATTTAATT-T--GCA--GTGGCC-T-TTGG---CCG---CGGCGGGTGGGGG--TG--GGG-T--G--------TCTCGTAA----CT-TTA--------CG---T-AAACGC--AACGT----A-ACCTTTA-----CCCA--
gi|20 : taTTTGATT-T--GCAGTG--GTT---TTGGA--ACGGGGTGGGGGGTGGGGGGTGG--GGG----G--------TC-A-----------AGA--------CG---T-AAA-T---AAC-T----G-ACCTTTA-----CCCA--TA-T--------------------TGAT-A-------A---AT-G-AAG--TAAT--CCCGTTCTTTC-ATA--TA-AT----CCACT--A---TCTATGA-TTCCATTGTC--TA--ATTTc
gi|16 : gACA-TGAATTTTCACAA--T--ATTGTGTTCGAATC-AGTTACTTC---TGGAT------GGAAGCT-AAC-ATTTCACAACCTG--GAA--------AGAACCCCGAAGAA--------TTCAGTTA-TG-AAGT-AGATTATATAGTGCTGTTCAAAAACTATCTAGCTA-
gi|21 : agccTT-CACGA--T-TAGGGCA---AAGTCATTTTTCTACATCTCGAT-CTGATGGGAGCTTGATTGTTTTTCAACCTGACGCAGCTACTGTAGTACCCCGAAGAG-CAGTACTGCTAATTACTGTAAGT-ACATAAT----TGTT-cagatagatgatttgattcatcaacaactttcagtcagcaac
gi|27 : TTCAAACTG--GAA--------AGTGCCTCAAAGAA-TG---TTTTCAA-CA-CG-AAGT-AGATTAC----TGTT-TA---AAACTATCTAGCTA------CAGA--TCAATCAAGTTGTTCAGTTGTAGTACTCT
gi|14 : tgTTAT----TGTT-TT---AAACTATCTAGCTA-TGTG-CAGA--TCAATCGAGTT-TT-AATTGTAG-ACTT--GAAAAGCCAATTAC-CA-CAAGAGGATAA-ATTACACA
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|24 ): ACAATAATGCATGTTCCCTGAAACTAGGTAATTACAAAAGGTGATATATATCACTTATTTCTGATTGCAAATTTGTCAGTTTTACACAATTTTAAAAATATCTGTGTATCAGGAA
Unaligned ( gi|33 ): ATTACTGTTTGAAAACTTTCTAGCTAGAGATCAAACAAATTAATCAGTTGTAGAGCTCTT
Unaligned ( gi|34 ): TGATAGGCATGTGCAATTCCAAATTCTTCGTTAAAATATTAATTATTTCCGTCTTCAA
Alignments
lowQualScore : 11111 33333333333333 1111 11 111111 88888888888888888888888888888888 1 2222222 22222222 22222 222222222222222 1 4444 222222222222222222222 1111 11 11111 11 5555555 99999999999999999999999999999 11 333333333333333333333333333333333333333333333333333333 11111 222 222 3333333 333 111111 55555555555555555555555 11111 111111111 11111 1111111 11 555555555555555555555555 1 4444444 88888888888888888888888888888 111 1 111 11111 1 2222 1 111 11 1 777777777 11 1111 22222222 22222222222 1 1111111 222222 11 111 1
lowQualScore : 5 22222 4 4 44444444444444 99 0000 00 222222 4 0 66 55555555555555555555555555555555 5 5 5 5 4 99 6 77 7 5 5 5 5 55 6 8 3 9999999 5 66666666 33333 66 999999999999999 0 0000 4 4 8 1 9999 2 66 4 66 4 0 888888888888888888888 66 1 5 1 5 5 5555 777 6 3 22 33333 4 0 4 7 00 4 8 6666 2 3 1111111 3 3 77777777777777777777777777777 0 3 3 00 44 777777777777777777777777777777777777777777777777777777 3 44 555 2 33 3 3 3 6 66 8 3 55 3 7 3 8 00000 4 000 555 44 7777777 55 3 111 55 444444 7777 666 55 666 3 66666666666666666666666 22222 3 3 3 9999 888888888 3 99999 3 2 777 4 777 00000 4 3333333 4 55 666 99 1 4 4 777 8 55 777 11 000000000000000000000000 4 4 5 66 4 00 5 3 0 5 5 7777777 3 11111111111111111111111111111 1 77 5 5 5 5 5 4 000 0 77 0 5 5 4 5 5 8 999 77777 0 2 1111 0 777 3 33 3 0 666666666 4 0 1 0 6 7 66 9 4444 2 6 6 77 00000000 1 22222222222 5 1 5 4444444 66 5 000000 11 0 666 5 66 0 66 5 55 0
lowQualScore : . ..... . . .............. .. .... .. ...... . . .. ................................ . . . . . .. . .. . . . . . .. . . . ....... . ........ ..... .. ............... . .... . . . . .... . .. . .. . . ..................... .. . . . . . .... ... . . .. ..... . . . . .. . . .... . . ....... . . ............................. . . . .. .. ...................................................... . .. ... . .. . . . . .. . . .. . . . . ..... . ... ... .. ....... .. . ... .. ...... .... ... .. ... . ....................... ..... . . . .... ......... . ..... . . ... . ... ..... . ....... . .. ... .. . . . ... . .. ... .. ........................ . . . .. . .. . . . . . ....... . ............................. . .. . . . . . . ... . .. . . . . . . . ... ..... . . .... . ... . .. . . ......... . . . . . . .. . .... . . . .. ........ . ........... . . . ....... .. . ...... .. . ... . .. . .. . .. .
lowQualScore : 0 55555 4 4 55555555555555 55 6666 66 888888 4 2 99 66666666666666666666666666666666 0 0 0 0 0 22 7 99 9 7 7 7 0 88 2 5 6 4444444 0 99999999 88888 99 666666666666666 0 3333 4 4 0 2 4444 4 11 4 11 4 1 666666666666666666666 44 3 7 4 0 0 6666 888 4 9 22 77777 4 1 4 6 88 4 9 9999 9 6 0000000 6 6 99999999999999999999999999999 2 2 1 99 66 666666666666666666666666666666666666666666666666666666 3 22 444 9 66 1 1 1 2 22 7 6 00 6 3 6 0 00000 0 000 000 88 1111111 00 6 333 00 888888 7777 444 00 444 6 44444444444444444444444 77777 6 6 6 7777 222222222 6 11111 6 2 000 0 000 00000 0 0000000 0 55 222 55 0 0 0 000 0 55 000 00 777777777777777777777777 4 4 4 11 4 22 0 2 0 0 0 9999999 0 33333333333333333333333333333 4 99 7 7 7 7 7 3 000 1 99 4 7 7 3 7 5 8 888 88888 0 5 2222 0 555 2 88 2 0 222222222 4 8 0 8 7 3 00 8 2222 5 7 7 99 77777777 0 99999999999 7 4 7 4444444 00 0 000000 99 8 444 0 99 4 99 0 55 0
consensus : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGCTTTG---GC-ATCGCAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-CCAA--TC----------TA------------TT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AC-CAATTAAANA--GGAAGCG-TCAG--TTTTAAATGANTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTTTGCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCGA-TTAGGTAT-AAAGTT-GTTTATTG-TACGATCAA-ATACGCAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAATT-G-ATATACAACT-TTTCG--ATC-AAGATAAAA-ATATT-TT-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AAATAATCAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTGGTGAAATTGACGGCGTATTTTTT--T----TT-----------ATTTTTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAAATGTAAGC-A-GACTACTA-TTATAAAGA-----GATTTGA--TT-TGCAGTG-GGT--TTTGGAAC--GCGG----GGGGGGGGG---GG--GG---G-GGGT-----G-TC-GT--CC------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG---TG-----AT-G-------AAC-GAAG--TAAT--CCC--GTTTTTTNAT-A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGTCTA-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATC-TTGC-CCCCCGC---CCC-------------CCCCC----TTTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATANTTTAA-A-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCACC-C-G-C-AANCTACATTAATTTTCAC-AATATAGGG-CCCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA-----A-T-T-TTTCAATTA-TG-AAGT-AGATTAT-------TGTTT-NAAA-CTATCTAGCTA-TGTG-CAGA--TCAAACGAGTT-TTAAATTGT--AGAACTTT--AAAAGTCAGTAACCAGNAAGAGGATAG-ACTACACA
Reference ( family-1197 ) : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGCTTTG---GC-ATCGCAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-CCAA--TC----------TA------------TT------AATGATTTCCGT-CTTCAGTTCTTGATTAATTTT-GT-AC-CAATTAAATA--GGAAGCG-TCAG--TTTTAAATGACTATAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTTTGCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCGA-TTAGGTATAAAAGTT-GTTTATTG-TACGATCAA-ATACGCAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAATTNG-ATA-ACAACT-TTTCG--ATC-AAGATAAAA-ATATT-TT-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AAATAANCAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTGGTGAAATTGACGGCGTATTTTTT--T----TTTA-TT-----TATTTTTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAAATGTAAGC-A-GACTACTA-TTATAAAGA-----GATTTGA--TT-TGCAGTGCGGT--TTTGGAAC--GCGG----GGGGGGGGG---GG--GG---G-GGGT-----G-TC-GT--CC------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG---TG-----AT-G-------AAC-GAAG--TAAT--CCC--GTTTTTTNAT-A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGTCTA-A-NTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATC--TGC-CCCCCGC---CCC-------------CCCCC----TTTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATANTTTAA-A-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCA---------AAACTACATTNATTTTCAC-AATATAGGG-CCCCAANTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCNCGAAGA-----A-T-T-TTTCAATTA-TG-AAGT-AGATTAT-------TGTTT-NAAA-CTATCTAGCTA-TGTG-CAGA--TCAAACAAGTT-TTAAATTGT--AGAACTTT--AAAAGTCCGTAACCAGAAAGAGGATAG-ACTACACA
gi|1 : ACGATTC--AAAA-GTCGCGCCATCGAGTTACGTCCCTATTTT-----GTGACGATCAAACGAG-GATAGCTTTG---GCTATCACAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-C--A--TC----------C--------------T------AATGATTTCCGT-ATTCAGTTCTTGATTAATTTTTGT-ACGCAATTAAAAA--GGAAGCG-TCAG--TTTTAAATGAGTGTAT-GGAGA-TTT-ATTTCCGATTTCCCGTATTT-AGCAAGAAAGACCGCCTCGATCGAAGTTTTTGCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAA--TCGCAA-TTAGGTATAAAAGTT-GTTTATTG-TACGATCAA-ATATG-AAT----GTTTTCATTTT--A--ATC--GT-TTAAATAATGGG-ATATACAACTGTTTCG--ATC-AAGATAAAA-ATATTATTGAAAGGGAATTTATGCT----A---GAGATGCAATCGACGTCATGATCGAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AATAAAACAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGCAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTAGTGAAATTGACGGCATATTTTTT--TGTG-TTTA-TT-----TATTTTTTTTTTTGGATGCACGAT-ATT-CCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTA--TC--AT---CGGT-AT-GATGTGGCAAA-TTTGGTCT-CTTTTAGGACAACTGCAAAA--CTAT-TA-GTGTACGCATGAAAGCGTGATTT-----CA-TTTTGGGAATAATC--ATGTAAGC-A-GAC-ACTATTTATAAAGAGCCACGATTTGA--TT-TGCAGTGTGGTTGTTTGGAAC--GCGG----GGGGGGGGG---GG--AG---G-GGGT-----G-TCAGT--CC------AGA-----G-AT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TA-TTT---TC-AAGCGATAG---TG-----AT-G-------AAC-GAAG--TAAT--CCC--GTTTACTCA--A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGTCTACA-TTTCATTAAGTC-AAT-T-T--AATTG----CAGA-TTG-TTTGAACATGTT-TCGTAATTTGT-ATCTTTGCGCCCCCAC---TCC-------------CTCCC----TTTGTGCTCA--TT-TAA-TC-TCAGA-TTTGTCTGC---TGCAGAA--TTTAGTTCATGTAATAAGCCATCGATGTCTCT-TTCAAAATATTTTAA-A-AATA-----AA-TGACAATGACTGT-A----TATTATAC---TA--TATTTAAAAAAAAACTTCATCTCGACGTTCATTGTACTTCTGATCAATGTACATTAA-TTTCAC-AAT-TAGGGCCCCCAACTCTGTT----ACTGCTGGAT-CGATGGAAGCT-AATTATTTTTCAACCTG--GAA--------AGTACCACGAAGA-----A-T-C-TTTCAATTA-TG-AAGTAAGATTAT-------TGTTT-TAAA-CTATCTAGCTA-TGTG-CAGAG-TCAATCGAGTT-TTAAATTGT--AGAACTTTAAAAAAGCCATTAA-CAGCAAGAGGATAACACTACACA
gi|10 : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGC---------------A---GTGT----GCAATAGGCAT--GT------TCGCTT-CCAA--TC----------TACTCATTAAAATATT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AA-CAATTAAATA--GGAAGCG-TCAG--TTTTAAATGA-TATAT-GGAGA-TTTTATTTT-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG--ACAGCTAC-------GAC-AGA--------TTTGGAATGCTTGTTACAAATGCA--CGATTAGGGTAAAA------A---AAAATTCACAATTTGGGT---AAAGTT-ATTTATTG-T-CAATCAATTTACACAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAACT-G-ATATACAAC--TCTCG--ATC-AAGCTAAAA-ATATT-TT-AAAGGGAATTTATACT----A---GAGATGCGATCGACGTCATGA--GAG--ATCACCAACA-TTGTAAACCCTTTTTA
gi|11 : cT-AT-TAT-T-GCAAA-TTT-GTCA-CTTT---------------A--CTAT-CA-GTGTAC-CATGAAA-CATGATAT-----CA-TTTTGGGAATGTTC-AATGTAAGCTA-GAATACTA--GATTAAGA------ATTTTA--TT-TCCATT--GGT--CTTGGACC--GTGG----GGAGGGGAG---GG--GG---T-TGATCCTTAC-CC-AC--CC------ACACCACCC-CT-AACA-A--AACATAACTTACTG-ACCTTTA-----CCCA-CCTTTTCGATC-AAGC-------------------------------AAG--TAA---GCC--GTTCTTTAAT-A-TATCGGG-CCACT--G---CC--TAGATGTA-TTCTCATTA-CTA-A--TTCACTTAATC-AATATTT--AA-T-AAGTTAAATTTG-TTTAAAAATGATGTTGTATTTTGT-AACA-CCC-CCCCCGCACTCCCACCACCCCACCCACCCCC----CATGTG-TTA--TTGTAATTT-TCGGA-TTT-TCC-C---AGGGAGA--TTT----CA-GA-AT-A--TATT-ATGTTTCTA
gi|12 : ggagatgcgatcatgattatcatttattttaaCGCATATTGGATGTTATGTACAG-----A-ATTTATGAA-TTACTTGCG-GGTGAA-TTTATGGCG----------------------------ATTTTTTCTCTTA-AT-CACGAT-ATG--CG--TGTTGCCTGAAAC-------------A-A----AGGAAATCACAAACGTGGGT---A------CAGTAGTTAT-TCTTAA---TTTT-AT-GAT-T-GCAAAATTT-GTCC-CTTTTA-TACAATTGTAAAA--CTGT-CA-GTGT---CATGAAAACGTGATTT-----CAATTTTGGGAATGTTCAA-TGTATGC-TTGACTGCTA-TTATAAAGA-----AATTT-ATTTT-TGCAGT--GGT--GTTGGAAC--GCGG----GGGGGGGGGTAAGGTCGGACTG-AGAC-----G-AC-CC--CCATACAAAGAG----C-GT-AA-A-GTTAAT---------TGTACCGTTACCTCGCCCACTCGTTT---TC-------TAG---TG-----TTCG-------AAT-CACG--TAAG--TTA--GTCCTTTTATAA-TA---GTCCCATTGCG---TA--TG-----ATTTC-CATAGTCCT-A-ATTCATTTAATC-AAT-TTTTAAA-TGactaaagaattaaacaa
gi|13 : T-AGCAAGATAGCCCGTCTCGA-----ATTTTTGCTGCGCATTGGGGT-AAACAT-----TTTCGAATGTTT-------ATGTG--GGAGTAAGGTAAGGCTTTTTA--------TCGCGA-TTAGG-GTAAA-GTT-ATTTATTG-TACCATCAA-CTATGCAAT----TCTTTGATTTT--AT-ATC--AT-CTAAATGAGT---------------------------GATAGAA-A-ACT-TT-AAAGGGAATTCACGCCTAGCA---GAGATGC-ATCGATGC----A--AAGATA--ACCAATA-TTGTAAACC---TTTATTTGC-ATATAATCAT-AA-----------CAAATCTTGAACGTT-GTATCACGTAT-TTGGATGTTATGTACAA---AAC-A-TTATTAA-TTACTC-C-----GACATTGTAGGCG-ATTTTTT--C----TT------------------------GATGCACGATAAAT-ACGCCTGTTGTCTGcgttgtt
gi|14 : TTAT-------TGTTT-TAAA-CTATCTAGCTA-TGTG-CAGA--TCAATCGAGTT-TT-AATTGT--AG-ACTTG--AAAAGCCAATTACCA-CAAGAGGATAA-ATTACACA
gi|15 : gattttttattatttcgcttaatactgTCAGTTCTTGATTAATTTT-GT-AC-CAATTAAAAA--GGAAGCG-TCAG--TTTTAAATGAGTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG-TTTTGCTAC-------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAA-TCGCAA-TTAGG-AT-AAAGTT-GTTTATTG-TACGATCAA-ATATGCataatgcatggacatcctctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaatgctaaaatgcgaatctttacatatacaggcgtaccctcttctttctccctcctaagttgtcatactgagtcggaacaaaaatgat
gi|16 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGCCACATGAATTTTCAC-AATATTGTG-TTCGAA-TCAGTT----ACTTCTGGAT-----GGAAGCT-AAC-ATTTCACAACCTG--GAA--------AGAACCCCGAAGA-----A------TTCAGTTA-TG-AAGT-AGATTATATAGTGCTGTTCAAAAA-CTATCTAGCTA------CAGA--T-AGATGA--T-TTGATTCATCAACAACTTT----CAGTCAGCAAC
gi|17 : ACGATTCCAAAAA-TTCGCGCCATC----------CCTTATTT-----GTGACG-TCAAACGAG-GATAGCTGTGTA-GA-A----AC-TGCGTTACAGCGATAGGCAT--GTTATAAATTACTCATTAA--AA----------TA------------TT------AATGATTTCCGT-TTTCAGTTCTTGATTAACTTT-GT-AC-CATTTA
gi|18 : gtatacATTTATGCTCT--A---GAGATGTGATCGACGTCATGA--GAGAT--------CA--------CCCTTTATATTTGG-AAATAATCAT-AAAAATT-C--A-CAAATCTTGAACATTTGTATCACGTAT-TTGG-----GTGTATAG-----A-ATTTATGAA-TTAGGC-CGTGGTGAAATTGACGGC-TACTTTTT--T----T
gi|19 : GATTTAAAAAA-GTCGCGACATAAAGTTACGTTCCTTATTT-----GTGACG-TCAAACGAG-GATAGCT
gi|2 : ttttccgaaatcataaaatattttgtaggtatcccttttaaggtctcctgacatcagtacaattgtcaatggtgtagcaaacatgacataACGATTCCAAAAA-GTCGCGCCACCGAGTTACGTCCCTTATTT-----GTGACG-TCAAATGAG-GATAGCTTTG---GC-ATCACAC-TGTGT----GCGATAGGCATACAT------TCGCTT-CCAA--TC-------------------------T------AATGATTTCCGT-ATTCAGTTTCTGATTTATTT---T-AC-CAATTAAATA--GGAAGCGTTCAGGTTTTTAAATGACTATAT-GGAGA-TTTTATTTC-GATTTCCCGTA-TT-AGCAAGA--ACCC-CCTCGATCGAAG-TTTTGCTAT-------GAC-AGA--------TTTGGAATGCTTG----AAATGCAGTCA--TAGGG-AAAA------A---A----TCGCGA-TTAGG-GT-AAAGTT-G-TTATTGATACGATCAA-ATATGCAAT----TGTTTCATTTT--ATAATC--GT-TT-AATAATT-G-ATA-ACAACT-TT-----ATC-AAGATAAAA-ATATC-AT-AAAGGGAATATATGCT----A---GAGATGC-ATCGACGTCATGA--GAG--ATCACCAACATTTGTAAACCCTTTTTATTTGC-AAATAAACATAAAAA-TT-C--ACCAAATCTTGAACGTTCGTATCACGCAT-TTGGATGTTATGTATAG---T---ATTTATGAA-TTACTC-CGT-GT-AAATTGACGGC-TA--TTTT--T----TTTAGTT-----TA---TTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AT---CGGT-AT-GAT-T-GCAAA-TTT-GTCTGCTTTTA-TACAACTGCAAAAACTTAT-TAGGTGTAC-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTC-AATGTAAGC-A-GACTACTA-TTATAAAGAGCCACGATTTGA--TT-TGCAGTG-G----TTTGGAAC---C---------GGAGGG---GG--GG---G-GGGT-----------T--CA------AGA-----C-G----------------------------TTTA-----CCCA-TATTTT---TC-AAGCGATAG---TG-----AT-G-------AACGGAAG--TAAT--CCC--GTTTTATCAA-A-TA---AT-CCATT--G---TC--TG-----A-TTC----------------CATTAAGTC-AAT-TTT--AA-TGAAGTTAG-TTTG-TTTG-AAATG-T-TCGTAATTTGTAATCT-TGT-CCTCCCC---CCT-------------TCCCT----TTTGTGTTCA--TT-TAA-TC-TCAGA-TTT-TCT-CTCTAGC-GAA--TTTAGTTCATGT-AT-AGCCATC-ATCTCTCTATTCAA
gi|20 : acTTTGA--TT-TGCAGTG--GT--TTTGGAAC--GGGG----TGGGGGGTG---GG--GG---GTGGGG-----G----GT--CA------AGA-----C-GT-AA-A-T--AAC---------TG-ACCTTTA-----CCCA-TAT---------------------TG-----AT-A-------AAT-GAAG--TAAT--CCC--GTTCTTTCAT-A-TA---AT-CCACT--A---TCTATG-----A-TTC-CATTGTCTA-A-TTT
gi|21 : gTTCAC-GAT-TAGGG-CA--AAGTCATTTTTCTACATCTCGATCTGATGGGAGCTTGATTGTTTTTCAACCTGACGCAGCTACTGTAGTACCCCGAAGAGCAGTA-C-T-GCT-AATTACTGTAAGT-ACATAAT-------TGTT
gi|22 : ACGATCAA-ACATACAAT----GTTTTCATTTT--AT-ATC--GT-TTCAA
gi|22 : agtaT-TT-AAAGGGAATAGTTGTT----A---GAGATGCAATCGACGT--------AGATATAACCAATA-TTGTTAACCTTTTTTATATGC-Agctttaaagggaatagttgttagagatgcaatcgacgtagatataaccaatattgttaaccttttttatatgcata
gi|23 : agtaacgatcaaacatacaatgttttcattttatatcgtttcaagcAT-AAAA-TTTC--A-CAAGTCTTGAACGTT-GTATGACGTAT-TTGGACGTTATCTATAG-----A-ATTTATTAA-TTACTC-CGTGATGCCATTGGCGACG----------------------------ATTTTTTTTTCTTGATGCACGAT-ATT-ta
gi|24 : ACAAT-AAT-GCA--TGTTCCCTGAAACTAGGTAATTACAAA-AGGTGA------------------T---A------TA--TATCAC-TT--AT---T--T-CT-GAT-T-GCAAA-TTT-GTCA-GTTTTA-CACAATTTTAAAA--ATAT-CT-GTGTAT-CAGGAA
gi|25 : G-TCAAACGAG-GATAGCTGTGTAGAA-ATTGCAT-TACG-----GCGATAGACAT--GA------TCGCTT-CTCA--TT----------TA------------CTCAATGTAATGATTTCCCT-CTTCAGTTCTTGATTAACTTT-GT-AC-GAATT
gi|26 : ----A------------------T---A------TA--AATCAT-TT--AT---C--T-AC-GAT-T-GGAGA-ATT-GACA-CTTTGA-TACAACTGTTAAC--CTATATATCTGTAT-CACGAAA-AGTGATTTTTTTCTA-TTTTGG--ATATCCA
gi|27 : aaacggggTTCAAACTG--GAA--------AGTGCCTCAAAGA-----A-TGT-TTTCAAC-A-CG-AAGT-AGATTAC-------TGTTT-AAAA-CTATCTAGCTA------CAGA--TCAATCAAGTTGTTCAGTTGT--AGTACTCT--
gi|28 : tgGATTCCAAAAA-GTCGCGTCATCGAGTTACGACCCTTATTTATTTTGTGACG-TTAAACGAG-GATAGCTTTA---GC-ATCGCAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-C
gi|29 : TA-TTATAAAGA------ATTTAA--TT-TGCAGTG-GCC--TTTGG-CC--GCGG----CGGGTGGGG---GT--GG---G-GTGT-----C-TC-GTAACT------TTA-----C-GT-AA-ACGC-AACG--------TA-ACCTTTA-----CCCA-
gi|3 : TGC-AAATAATCA--AAAA-TT-C--A-CAAATCTTGAACGTTCGTATTACGTAT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TATTTTTT--------------------ATTTTTTTGTT-GGATGCACGAT-ATT-TCG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAA-TGTAAGC-AAGACTACTA-TTATAAAGA-----G-TTTGA--TT-TGCAG--CGGT--TTTGGAA-----GG----GGGGGGGGG---GG--GG---G-GGGA-----G-T---T--CA------AGA-----C-GT-AA-A-G--AAC---------TG-AC-TTTA-----CCCA-TATTTT---TC-AAGCGATAT---TG-----AT-G-------AAC-GAAG--TAAT--CCCCCGTTTTTTAAT-A-TA---AT-CCATT--G---TC--TA--------------TG-------ATTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT--------TCCCGC---C-------------------------TTGCGCTCA--TT-T-A-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATAATTTAACA-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCA---------AAACTACATTTATTTTCAC-AATATAGGG--CCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA-----ATT-T-TTTCAATTA-TG-AAGA-AGATTAT-------TGTTT-AAAA-CTATTTAGCTATTGTG-CAGA--TCAAACAAG-T-TTAAATTGT--AGAACTTT--AAAAGTCCGTAACCAGAAAGAGGATAG-ACTCCACAc
gi|30 : TTTTTTTTTTTGGATGAACGTT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---ATAGGCCTA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-
gi|31 : ttttttttggggggtTTTTTTAGT----TTTA-TTATCATTATTTTTTTTTT--GATGCACGAT-ATT-TCG--TATTGCCAGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GA
gi|32 : ttAGGTA---AAGTT-ATTTATTG-TACGATAAA-A-ATGCAAT----GCTTTCATTCT--CT-ATA--AT-TTAAGT
gi|33 : taATTAC-------TGTTT-GAAAACTTTCTAGCTA----G--AGA--TCAAACAAATTAATCAGTTGT--AGAGCTCT--
gi|34 : GATAGGCAT--GT------GCAATT-CCAAATTCTTCGTTAAAATA------------TT------AATTATTTCCGT-CTTCAt
gi|4 : tTGC-AAATAATCA--AAAA-TT-C--A-CAAATCTTGAACGTTCGTATTACGTAT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TATTTTT---------------------ATTTTTTTTGTTGGATGCACGAT-ATT--CG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT--AT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT--ATGAA--CGTGATTT-----CA-TTTTGG-AATATTCAA-TGTAAGC-AAGACTACTA-TTATAAAGA-----G-TTTGA--TT-TGCAG--CGGT--TTTGGAAC---CGG----GGGGGGGGG---GG--GG---G-GGGA-----G-T---T--CA------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG---TG-----AT-G-------AAC-GAAG--TAAT--CCCC-GTTTTTTAAT-A-TA---AT-CCATT--G---TC--TA------------------TG-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT-----T-CCCCCGC-----------------------------TTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATAATTTAA-ACAATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCA---------AAACTACATTTATTTTCAC-AATATAGGG--CCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTA-TTTTCAGCCTG--GAA--------AGTACCACGAAGA-----T-T-T-TTTCAATTA-TG-AAGA-AGATTAT-------TGTTT-AAAA-CTATTTAGCTATTGTG-CAGA--TCAAACAAG-T-TTAAATTGT--AGAACTTT--AAAAGTCCGTAACCAGAAAGAGGATAG-ACTACACAa
gi|5 : --TTTTGAATGCCTATCT-GGAGA-CTTTATTTA-AATTTCACGTATTTTAGCAAGAAAACCCGCCTCGA-----GGTTTTGCTCCG------GATTAGGGTAAAACTTTTGGAATGATC-------ATGCA--CGATTAGGATAAAT------ATTT----TTTGCGA-TTA-----------------ATTG-TACGATCAA-ATACGCAATATTTGTTTTTATTTT--AC-ATCTCATCTTA--TAATTGGTACA-A-AACT-TTC----AT------TAAAG----CT-TT-AAAGGTAATTTGTCCT----AACAGAGATGCGATC--------------------ATCAAAA-TTGCAAGCCATTTTTATTTGC-ATAT---CAT-AAAA-TTTC--C-CAAATCTTGAACGTTCG-ATCACGTGT-TTGGATGATATGTAT-----------TTATGAA-TGGCTC-CGGGGTGAAATTGACGGCG----------------------------ATTTTTTT-----AATGCACGAT-ACT-GCG--TTTTGCCTGAAAC-------------A-ATC--A------------------CTTGA------TA--AAGGATATC--ACAAACGG-----------GTACA-TTT-GTT-------------ACT---AAA--CTAT-CA-GTGTAT-CATGAAA-CATGATTC-----CA-TTTTGGGTATGTTCAA-TATAAGCTA-GACTACTA-TTATAAAGA-----G-TTTAA--TT-TGCAGTG--GT--GT-----------A----GGGGGGGGG---GG--GG---G-GGGT-----GACC-TT--CCCAATCAAAA-----CAGT-AA-A-A--AA-----------G-AATTTT-------TTA-T-TTTT---TC-AACCGATAG---TGTTTTGAT-ATTCGGTCAAC-GAAG--TAAG--CCC--GCTTTTTGAT-T-TA---TT-TCATC--G---CCTATG-----ATTTC-CACCGTCTT-A-ATTCAT-------------------TGAAATTA----TG-TATG--AATG-T-TCATAATTTGT-AGCGTTGC-CCCC
gi|6 : --AC---CGGT-ATTGAT-T-GCAAA-TTTTGTCT-CTTT-A-T-TAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTAATTT-----CA-TTTTGGGAATATC--AATGTAAGCAA-GTCTACTA--TAT-AAGA-----G-TTTGA--TTATGCAGTTGGGT--TTTGGA------GGAAACGGGGTGGGG---GG--GG---G-GGGT-----G-T---T--TC------AGA-----C-GTCAA-A-G--AAC---------TG-ACCTTTA-----CCCA-TGTTTT---TCAAAGCGATAAGTTTG-----AT-G-------AAC-GAAAGTTAAT--CCT--GCTTTTTCAT-ATTA---ATCCCATT--GATTTT--TG-----A-TTT-CACTGTCTA-ATTTTCATTAAGTCAAAT-TTT--AA-TGAAGTTAGATTTGTTTTGAAAATT-T-TCG-AA-TTGT-ATCATTGC-CCCCC-C---CCC-------------CCCCCACCTTTTTTGCTCACCTT-TAA-TCTTCAGATTTT-TCTGC---AGCAGAATTTTTAGTTC-TGT-AT-A-CCACC-ATGT-TCTATTCAAATAATTTTAA-C-AATATGTACAGTTGACGATGACTGTCAATATTA-TATATTTATATTTGTTT--TAAAAAACTTCATCTCG-CGTTCA-TGTACCGTGATC-AATCTACA-TAATTTTCACAAACATAGGG-CCCCA----------------------CCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------ATTACCACGAAGA-----A-T-TCTTTCAATTA-TGAAAGT-AGATTAT-------TATTT-TAAA-ATATCAAGTTA-TGTGACAGAATTCAAACAAG----TAAATTGT--AGAACTTT--A
gi|7 : CGATTCCAAAAAAGTCGCGC-ATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAGCGATAGCTT-G---GC-ATCACACCTGT-T----GCGATAGGCATA-GT------TCGCT--CCAA--TC----------TA---------------------ATGATT-CCGTACTTAAGTTCTTGATTAATTTT-GTTAC-CAATTAAAAAACGGAAGCG-TCAG--TTTTAAATGAGTGTATTGGAGAATTTTATTTC-GATT-CCCGTATTT--GCA-GAA-ACCCGC-TCG--TGAAGTTTT-GCTACG-------AC-AGG--------ATTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCAA-TTAGG-ATAAAAGTTCGTTTATTG-TACGATC-A-ATATGCAAT----G-TTTCATTTTTAGT-ATC--GT-TTAAAT-ATTTG-ATA-ACAACC-TTTCGATATCAAAGATAAAATATCTT-AT-AAAGGGAATTTATGCT----A---GAGATGCAATCGACGTCATGATCGAGATATCACCAAC--TGGTAAACCC-TGTTATTTGCAAAATAA-CATAAAAA-TT-CCAA-CAAATCTTGAACGTTCGTATCACGCAT-TTGGAT-TTATGTATAG---T---ATTTATGAATTTACAT-CGTAGTGAAATTGACGGC-TATTTTTT--TTTAGTTTA-TT-----T-TTTTTTTTTTTGGATGCACTA--ATTACCG--TGTTGCCTGAAAA-------------AGA----A------------------T---A------TA--AA-TAC-TC--AT---CGGTAAT-GAT-T-GCAAA--TT-GTCT-CTT
gi|8 : AT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TATTTTTT--------------------ATTTTTTTTGTTGGATGCACGAT-ATT-TCG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT--AT-T-GCAAA-TTT-GTCT-CTTT-A-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAA-TGTAAGC-AAGACTACTA-TTATAAAGA-----G-TTTGA--TT-TGCAG---GGT--TTTGGAACCGGGGG----GGGGGGGGG---GG--GG---G-GGG------G-GA-GT--TCA-----AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG---TG-----AT-G-------AAC-GAAG--TAATCCCCC--GTTTTTTAAT-A-TA---AT-CCATT--G---TC--TA------------------TG-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT-----T-CCCCCGC-----------------------------TTGTGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATA-TGTAATA-GATAT----
gi|9 : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGC---------------A---GTGT----GCAATAGGCAT--GT------TCGCTT-CCAA--TC----------TACTCATTAAAATATT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AA-CAATTAAATA--GGAAGCG-TCAG--TTTTAAATGACTATAT-GGAGA-TTTTATTTT-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG--ACAGCTAC-------GAC-AGA--------TTTGGAATGCTTGTTACAAATGCA--CGATTAGGGTAAAA------A---AAAATTCACAATTTGGGT---AAAGTT-ATTTATTG-TACAATCAATTTACACAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAACT-G-ATATACAAC--TCTCG--ATC-AAGCTAAAA-ATATT-TT-AAAGGGAATTTATACT----A---GAGATGCGATCGACGTCATGA--GAG--ATCACCAACA-TTGTAAACCCTTTTTA
Alignments
lowQualScore : 11111 33333333333333 1111 11 111111 88888888888888888888888888888888 2 3333333 22222222 22222 222222222222222 33 1 11 22222 1111 11 11111 11 5555555 7777777777777777777777777777777 1111111 11 333333333333333333333333333333333333333333333333333333 11111 222 222 3333333 2222 111111 55555555555555555555555 11111 111111111 11111 1111111 11 4444444444444444444444444 1 3333333 88888888888888888888888888888 111 1 111 11111 1 2222 1 111 11 1 8888888888 11 1111 22222222 22222222222 1 1111111 222222 11 111 1
lowQualScore : 5 1 22222 4 4 33333333333333 99 0000 00 222222 4 0 66 88888888888888888888888888888888 5 5 5 5 1 99 6 77 6 5 5 5 5 55 6 4 5555555 5 66666666 33333 66 999999999999999 22 4 4 4 4 8 1 9999 2 66 4 66 4 5 0 22 00000 66 4 77 1 55 5 5555 777 6 3 22 33333 4 0 4 0 3 00 4 8 6666 2 3 1111111 3 3 2 2222222222222222222222222222222 0000000 3 3 00 44 777777777777777777777777777777777777777777777777777777 3 44 555 2 33 3 3 3 6 66 8 3 55 3 7 3 8 00000 4 000 555 44 7777777 3 55 3 3 1111 777777 7777 666 55 666 3 66666666666666666666666 22222 3 3 3 9999 888888888 3 99999 3 2 777 4 77777 4 3333333 4 55 666 99 1 4 4 777 8 55 777 11 6666666666666666666666666 4 4 5 66 4 00 5 3 0 5 5 5555555 3 11111111111111111111111111111 1 77 5 5 5 5 5 4 000 0 77 0 5 5 4 5 5 8 999 77777 0 2 1111 0 777 3 33 3 0 4444444444 1 0 1 0 6 7 66 6 4444 2 6 6 77 00000000 1 22222222222 5 1 5 4444444 66 5 333333 11 0 666 5 66 0 66 0 33 0
lowQualScore : . . ..... . . .............. .. .... .. ...... . . .. ................................ . . . . . .. . .. . . . . . .. . . ....... . ........ ..... .. ............... .. . . . . . . .... . .. . .. . . . .. ..... .. . .. . .. . .... ... . . .. ..... . . . . . .. . . .... . . ....... . . . ............................... ....... . . .. .. ...................................................... . .. ... . .. . . . . .. . . .. . . . . ..... . ... ... .. ....... . .. . . .... ...... .... ... .. ... . ....................... ..... . . . .... ......... . ..... . . ... . ..... . ....... . .. ... .. . . . ... . .. ... .. ......................... . . . .. . .. . . . . . ....... . ............................. . .. . . . . . . ... . .. . . . . . . . ... ..... . . .... . ... . .. . . .......... . . . . . . .. . .... . . . .. ........ . ........... . . . ....... .. . ...... .. . ... . .. . .. . .. .
lowQualScore : 0 4 55555 4 4 88888888888888 55 6666 66 888888 4 2 99 66666666666666666666666666666666 0 0 0 0 0 22 7 99 6 7 7 7 0 88 2 6 6666666 0 99999999 88888 99 666666666666666 22 4 4 4 4 0 2 4444 4 11 4 11 4 7 6 99 00000 44 7 11 3 55 0 6666 888 4 9 22 77777 4 1 4 4 6 88 4 9 9999 9 6 0000000 6 6 1 6666666666666666666666666666666 8888888 3 1 99 66 666666666666666666666666666666666666666666666666666666 3 22 444 9 66 1 1 1 2 22 7 6 00 6 3 6 0 00000 0 000 000 88 1111111 6 00 6 6 3333 111111 7777 444 00 444 6 44444444444444444444444 77777 6 6 6 7777 222222222 6 11111 6 2 000 0 00000 0 0000000 0 55 222 55 0 0 0 000 0 55 000 00 8888888888888888888888888 4 4 4 11 4 22 0 2 0 0 0 5555555 0 33333333333333333333333333333 4 99 7 7 7 7 7 3 000 1 99 4 7 7 3 7 5 8 888 88888 0 5 2222 0 555 2 88 2 0 2222222222 0 8 4 8 7 3 00 7 2222 5 7 7 99 77777777 6 99999999999 7 4 7 4444444 00 0 111111 99 8 444 0 99 4 99 6 55 0
consensus : ACGATTCC-AAAAAGTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGCTTTG---GC-ATCGCA-CTGTGT----GCGATAGGCAT--GT------TCGCTT-CCAA--TC----------TA------------TT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-G-TAC-CAATTAAANA--GGAAGCG-TCAG--TTTTAAATGANTGTA-TGGAG-ATTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG-TTTTGCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCGATTAGG-GT-AAA-GTT-GTTTATTG-TACGATCAA-ATACGCAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAATTG-ATATACAACT-TTTCG--ATC-AAGATAAAA-ATATT-TT-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AAATAATCAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTGGTGAAATTGACGGCGTATTTTT--T--------TT-A--------TT-------T-TTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAAATGTAAGC-A-GACTACTA-TTATAAAGA-----GATTTGATT-T--GCAG-TG-GGT--TTTGGAAC--GCGG----GGGGGGGGG---GG--GG---G-GGGT-----G-TC-GT--CC------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCC--GTTTTTTNAT-A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGT-CTA-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATC-TTGC-CCCCCGC---CCC-------------CCCCC----TTTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATANTTTAA-A-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCAC--C-TGATCAANCTACATTAATTTTCAC-AATATAGGG-CCCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA-----A-T-T-TTTCAATTA-TG-AAGT-AGATTAT-------TGTTT-NAAA-CTATCTAGCTA-TGTG-CAGA--TCAAACGAGTT-TTAAATTGT--AGAACTTT--AAAAGTCAGTAACCAGNAAGAGGATAG-ACTACACA
Reference ( family-1197 ) : ACGATTCC-AAAAAGTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGCTTTG---GC-ATCGCA-CTGTGT----GCGATAGGCAT--GT------TCGCTT-CCAA--TC----------TA------------TT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-G-TAC-CAATTAAANA--GGAAGCG-TCAG--TTTTAAATGANTGTA-TGGAG-ATTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTTTGCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCGATTAGGTAT-AAA-GTT-GTTTATTG-TACGATCAA-ATACGCAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAATTG-ATATACAACT-TTTCG--ATC-AAGATAAAA-ATATT-TT-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AAATAATCAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTGGTGAAATTGACGGCGTATTTTT--T--------TTTA--------TT-------T-TTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAAATGTAAGC-A-GACTACTA-TTATAAAGA-----GATTTGATT-T--GCAG-TG-GGT--TTTGGAAC--GCGG----GGGGGGGGG---GG--GG---G-GGGT-----G-TC-GT--CC------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCC--GTTTTTTNAT-A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGT-CTA-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATC-TTGC-CCCCCGC---CCC-------------CCCCC----TTTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATANTTTAA-A-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCAC--C-CG--CAANCTACATTAATTTTCAC-AATATAGGG-CCCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA-----A-T-T-TTTCAATTA-TG-AAGT-AGATTAT-------TGTTT-NAAA-CTATCTAGCTA-TGTG-CAGA--TCAAACGAGTT-TTAAATTGT--AGAACTTT--AAAAGTCAGTAACCAGNAAGAGGATAG-ACTACACA
gi|1 : ACGATTC---AAAAGTCGCGCCATCGAGTTACGTCCCTATTTT-----GTGACGATCAAACGAG-GATAGCTTTG---GCTATCACA-CTGTGT----GCGATAGGCAT--GT------TCGCTT-C--A--TC----------C--------------T------AATGATTTCCGT-ATTCAGTTCTTGATTAATTTTTG-TACGCAATTAAAAA--GGAAGCG-TCAG--TTTTAAATGAGTGTA-TGGAG-ATTT-ATTTCCGATTTCCCGTATTT-AGCAAGAAAGACCGCCTCGATCGAAGTTTTTGCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAA--TCGCAATTAGGTAT-AAAAGTT-GTTTATTG-TACGATCAA-ATATG-AAT----GTTTTCATTTT--A--ATC--GT-TTAAATAATGGGATATACAACTGTTTCG--ATC-AAGATAAAA-ATATTATTGAAAGGGAATTTATGCT----A---GAGATGCAATCGACGTCATGATCGAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AATAAAACAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGCAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTAGTGAAATTGACGGCATATTTTT--TTGTGTTTATTTA--------TT-------T-TTTTTTTTGGATGCACGAT-ATT-CCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTA--TC--AT---CGGT-AT-GATGTGGCAAA-TTTGGTCT-CTTTTAGGACAACTGCAAAA--CTAT-TA-GTGTACGCATGAAAGCGTGATTT-----CA-TTTTGGGAATAATC--ATGTAAGC-A-GAC-ACTATTTATAAAGAGCCACGATTTGATT-T--GCAG-TGTGGTTGTTTGGAAC--GCGG----GGGGGGGGG---GG--AG---G-GGGT-----G-TCAGT--CC------AGA-----G-AT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TA-TTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCC--GTTTACTCA--A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGT-CTACA-TTTCATTAAGTC-AAT-T-T--AATTG----CAGA-TTG-TTTGAACATGTT-TCGTAATTTGT-ATCTTTGCGCCCCCAC---TCC-------------CTCCC----TTTGTGCTCA--TT-TAA-TC-TCAGA-TTTGTCTGC---TGCAGAA--TTTAGTTCATGTAATAAGCCATCGATGTCTCT-TTCAAAATATTTTAA-A-AATA-----AA-TGACAATGACTGT-A----TATTATAC---TA--TATTTAAAAAAAAACTTCATCTCGACGTTCATTGTACTTC-TGATCAATGTACATTAA-TTTCAC-AAT-TAGGGCCCCCAACTCTGTT----ACTGCTGGAT-CGATGGAAGCT-AATTATTTTTCAACCTG--GAA--------AGTACCACGAAGA-----A-T-C-TTTCAATTA-TG-AAGTAAGATTAT-------TGTTT-TAAA-CTATCTAGCTA-TGTG-CAGAG-TCAATCGAGTT-TTAAATTGT--AGAACTTTAAAAAAGCCATTAA-CAGCAAGAGGATAACACTACACA
gi|10 : ACGATTCC-AAAAAGTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGC---------------A---GTGT----GCAATAGGCAT--GT------TCGCTT-CCAA--TC----------TACTCATTAAAATATT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-G-TAA-CAATTAAATA--GGAAGCG-TCAG--TTTTAAATGA-TATA-TGGAG-ATTTTATTTT-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG--ACAGCTAC-------GAC-AGA--------TTTGGAATGCTTGTTACAAATGCA--CGATTAGGGTAAAA------A---AAAATTCACAATTTGG-GT-AAA-GTT-ATTTATTG-T-CAATCAATTTACACAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAACTG-ATATACAAC--TCTCG--ATC-AAGCTAAAA-ATATT-TT-AAAGGGAATTTATACT----A---GAGATGCGATCGACGTCATGA--GAG--ATCACCAACA-TTGTAAACCCTTTTTA
gi|11 : cT-AT-TAT-T-GCAAA-TTT-GTCA-CTTT---------------A--CTAT-CA-GTGTAC-CATGAAA-CATGATAT-----CA-TTTTGGGAATGTTC-AATGTAAGCTA-GAATACTA--GATTAAGA------ATTTTATT-T--CCA--TT-GGT--CTTGGACC--GTGG----GGAGGGGAG---GG--GG---T-TGATCCTTAC-CC-AC--CC------ACACCACCC-CT-AACA-A--AACATAACTTACTG-ACCTTTA-----CCCA-CCTTTTCGATC-AAGC----------------------------AAG--TAA---GCC--GTTCTTTAAT-A-TATCGGG-CCACT--G---CC--TAGATGTA-TTCTCATTA--CTA-A--TTCACTTAATC-AATATTT--AA-T-AAGTTAAATTTG-TTTAAAAATGATGTTGTATTTTGT-AAC-ACCC-CCCCCGCACTCCCACCACCCCACCCACCCCC----CATGTG-TTA--TTGTAATTT-TCGGA-TTT-TCC-C---AGGGAGA--TTT----CA-GA-AT-A--TATT-ATGTTTCTA
gi|12 : ggagatgcgatcatgattatcatttattttaaCGCATATTGGATGTTATGTACAG-----A-ATTTATGAA-TTACTTGCG-GGTGAA-TTTATGGCG---------------------A--------TT-------T-TTTCTCTTA-AT-CACGAT-ATG--CG--TGTTGCCTGAAAC-------------A-A----AGGAAATCACAAACGTGGGT---A------CAGTAGTTAT-TCTTAA---TTTT-AT-GAT-T-GCAAAATTT-GTCC-CTTTTA-TACAATTGTAAAA--CTGT-CA-GTGT---CATGAAAACGTGATTT-----CAATTTTGGGAATGTTCAA-TGTATGC-TTGACTGCTA-TTATAAAGA-----AATTT-ATT-TTTGCAG-TG-G-T--GTTGGAAC--GCGG----GGGGGGGGGTAAGGTCGGACTG-AGAC-----G-AC-CC--CCATACAAAGAG----C-GT-AA-A-GTTAAT---------TGTACCGTTACCTCGCCCACTCGTTT---TC-------TAG-----TGTTCG-------AAT-CACG--TAAG--TTA--GTCCTTTTATAA-TA---GTCCCATTGCG---TA--TG-----ATTTC-CATAGTCCTA-A--TTCATTTAATC-AAT-TTTTAAA-TGactaaagaattaaacaa
gi|13 : T-AGCAAGATAGCCCGTCTCGA-----ATTTTTGCTGCGCATTGGGGT-AAACAT-----TTTCGAATGTTT-------ATGTG--GGAGTAAGGTAAGGCTTTTTA--------TCGCGATTAGG-GT-AAA-GTT-ATTTATTG-TACCATCAA-CTATGCAAT----TCTTTGATTTT--AT-ATC--AT-CTAAATGAGTG-ATAGAAAACT-TT----------------------------AAAGGGAATTCACGCCTAGCA---GAGATGC-ATCGATGC----A--AAGATA--ACCAATA-TTGTAAACC---TTTATTTGC-ATATAATCAT-AA-----------CAAATCTTGAACGTT-GTATCACGTAT-TTGGATGTTATGTACAA---AAC-ATT-ATTAA-TTACTC-CG-----ACATTGTAGGCG---------------------A--------TT-------T-TTTCTT---GATGCACGATAAAT-ACGCCTGTTGTCTGcgttgtt
gi|14 : TTAT-------TGTTT-TAAA-CTATCTAGCTA-TGTG-CAGA--TCAATCGAGTT-TT-AATTGT--AG-ACTTG--AAAAGCCAATTACCA-CAAGAGGATAA-ATTACACA
gi|15 : gattttttattatttcgcttaatactgTCAGTTCTTGATTAATTTT-G-TAC-CAATTAAAAA--GGAAGCG-TCAG--TTTTAAATGAGTGTA-TGGAG-ATTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG-TTTTGCTAC-------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAA-TCGCAATTAGG-AT-AAA-GTT-GTTTATTG-TACGATCAA-ATATGCataatgcatggacatcctctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaatgctaaaatgcgaatctttacatatacaggcgtaccctcttctttctccctcctaagttgtcatactgagtcggaacaaaaatgat
gi|16 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGCCACATGAATTTTCAC-AATATTGTG-TTCGAA-TCAGTT----ACTTCTGGAT-----GGAAGCT-AAC-ATTTCACAACCTG--GAA--------AGAACCCCGAAGA-----A------TTCAGTTA-TG-AAGT-AGATTATATAGTGCTGTTCAAAAA-CTATCTAGCTA------CAGA--T-AGATGA--T-TTGATTCATCAACAACTTT----CAGTCAGCAAC
gi|17 : ACGATTCC-AAAAATTCGCGCCATC----------CCTTATTT-----GTGACG-TCAAACGAG-GATAGCTGTGTA-GA-A----A-CTGCGTTACAGCGATAGGCAT--GTTATAAATTACTCATTAA--AA----------TA------------TT------AATGATTTCCGT-TTTCAGTTCTTGATTAACTTT-G-TAC-CATTTA
gi|18 : gtatacATTTATGCTCT--A---GAGATGTGATCGACGTCATGA--GAGAT--------CA--------CCCTTTATATTTGG-AAATAATCAT-AAAAATT-C--A-CAAATCTTGAACATTTGTATCACGTAT-TTGG-----GTGTATAG-----A-ATTTATGAA-TTAGGC-CGTGGTGAAATTGACGGC-TACTTTT--T--------TT
gi|19 : GATTTA-AAAAAGTCGCGACATAAAGTTACGTTCCTTATTT-----GTGACG-TCAAACGAG-GATAGCT
gi|2 : ttttccgaaatcataaaatattttgtaggtatcccttttaaggtctcctgacatcagtacaattgtcaatggtgtagcaaacatgacataACGATTCC-AAAAAGTCGCGCCACCGAGTTACGTCCCTTATTT-----GTGACG-TCAAATGAG-GATAGCTTTG---GC-ATCACA-CTGTGT----GCGATAGGCATACAT------TCGCTT-CCAA--TC-------------------------T------AATGATTTCCGT-ATTCAGTTTCTGATTTATTT----TAC-CAATTAAATA--GGAAGCGTTCAGGTTTTTAAATGACTATA-TGGAG-ATTTTATTTC-GATTTCCCGTA-TT-AGCAAGA--ACCC-CCTCGATCGAAG-TTTTGCTAT-------GAC-AGA--------TTTGGAATGCTTG----AAATGCAGTCA--TAGGG-AAAA------A---A----TCGCGATTAGG-GT-AAA-GTT-G-TTATTGATACGATCAA-ATATGCAAT----TGTTTCATTTT--ATAATC--GT-TT-AATAATTG-ATA-ACAACT-TT-----ATC-AAGATAAAA-ATATC-AT-AAAGGGAATATATGCT----A---GAGATGC-ATCGACGTCATGA--GAG--ATCACCAACATTTGTAAACCCTTTTTATTTGC-AAATAAACATAAAAA-TT-C--ACCAAATCTTGAACGTTCGTATCACGCAT-TTGGATGTTATGTATAG---T---ATTTATGAA-TTACTC-CGT-GT-AAATTGACGGC-TATTTTT--T--------TTAG--------TT-------TATTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AT---CGGT-AT-GAT-T-GCAAA-TTT-GTCTGCTTTTA-TACAACTGCAAAAACTTAT-TAGGTGTAC-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTC-AATGTAAGC-A-GACTACTA-TTATAAAGAGCCACGATTTGATT-T--GCAG-TG-G----TTTGGAAC---C---------GGAGGG---GG--GG---G-GGGT-----------T--CA------AGA-----C-G----------------------------TTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AACGGAAG--TAAT--CCC--GTTTTATCAA-A-TA---AT-CCATT--G---TC--TG-----A-TTC-----------------CATTAAGTC-AAT-TTT--AA-TGAAGTTAG-TTTG-TTTG-AAATG-T-TCGTAATTTGTAATC-TTGT-CCTCCCC---CCT-------------TCCCT----TTTGTGTTCA--TT-TAA-TC-TCAGA-TTT-TCT-CTCTAGC-GAA--TTTAGTTCATGT-AT-AGCCATC-ATCTCTCTATTCAA
gi|20 : acTTTGATT-T--GCAG-TG-G-T--TTTGGAAC--GGGG----TGGGGGGTG---GG--GG---GTGGGG-----G----GT--CA------AGA-----C-GT-AA-A-T--AAC---------TG-ACCTTTA-----CCCA-TAT-----------------------TGAT-A-------AAT-GAAG--TAAT--CCC--GTTCTTTCAT-A-TA---AT-CCACT--A---TCTATG-----A-TTC-CATTGT-CTA-A-TTT
gi|21 : gTTCAC-GAT-TAGGG-CA--AAGTCATTTTTCTACATCTCGATCTGATGGGAGCTTGATTGTTTTTCAACCTGACGCAGCTACTGTAGTACCCCGAAGAGCAGTA-C-T-GCT-AATTACTGTAAGT-ACATAAT-------TGTT
gi|22 : ACGATCAA-ACATACAAT----GTTTTCATTTT--AT-ATC--GT-TTCAA
gi|22 : agtaT-TT-AAAGGGAATAGTTGTT----A---GAGATGCAATCGACGT--------AGATATAACCAATA-TTGTTAACCTTTTTTATATGC-Agctttaaagggaatagttgttagagatgcaatcgacgtagatataaccaatattgttaaccttttttatatgcata
gi|23 : agtaacgatcaaacatacaatgttttcattttatatcgtttcaagcAT-AAAA-TTTC--A-CAAGTCTTGAACGTT-GTATGACGTAT-TTGGACGTTATCTATAG-----A-ATTTATTAA-TTACTC-CGTGATGCCATTGGCGACG---------------------A--------TT-------T-TTTTTTCTTGATGCACGAT-ATT-ta
gi|24 : ACAAT-AAT-GCA--TGTTCCCTGAAACTAGGTAATTACAAA-AGGTGA------------------T---A------TA--TATCAC-TT--AT---T--T-CT-GAT-T-GCAAA-TTT-GTCA-GTTTTA-CACAATTTTAAAA--ATAT-CT-GTGTAT-CAGGAA
gi|25 : G-TCAAACGAG-GATAGCTGTGTAGAA-ATTGCA-TTACG-----GCGATAGACAT--GA------TCGCTT-CTCA--TT----------TA------------CTCAATGTAATGATTTCCCT-CTTCAGTTCTTGATTAACTTT-G-TAC-GAATT
gi|26 : ----A------------------T---A------TA--AATCAT-TT--AT---C--T-AC-GAT-T-GGAGA-ATT-GACA-CTTTGA-TACAACTGTTAAC--CTATATATCTGTAT-CACGAAA-AGTGATTTTTTTCTA-TTTTGG--ATATCCA
gi|27 : aaacggggTTCAAACTG--GAA--------AGTGCCTCAAAGA-----A-TGT-TTTCAAC-A-CG-AAGT-AGATTAC-------TGTTT-AAAA-CTATCTAGCTA------CAGA--TCAATCAAGTTGTTCAGTTGT--AGTACTCT--
gi|28 : tgGATTCC-AAAAAGTCGCGTCATCGAGTTACGACCCTTATTTATTTTGTGACG-TTAAACGAG-GATAGCTTTA---GC-ATCGCA-CTGTGT----GCGATAGGCAT--GT------TCGCTT-C
gi|29 : TA-TTATAAAGA------ATTTAATT-T--GCAG-TG-GCC--TTTGG-CC--GCGG----CGGGTGGGG---GT--GG---G-GTGT-----C-TC-GTAACT------TTA-----C-GT-AA-ACGC-AACG--------TA-ACCTTTA-----CCCA-
gi|3 : TGC-AAATAATCA--AAAA-TT-C--A-CAAATCTTGAACGTTCGTATTACGTAT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TATTTTT--T-----------A--------TT-------T-TTTTGTT-GGATGCACGAT-ATT-TCG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAA-TGTAAGC-AAGACTACTA-TTATAAAGA-----G-TTTGATT-T--GCAG-CG-G-T--TTTGGAA-----GG----GGGGGGGGG---GG--GG---G-GGGA-----G-T---T--CA------AGA-----C-GT-AA-A-G--AAC---------TG-AC-TTTA-----CCCA-TATTTT---TC-AAGCGATAT-----TGAT-G-------AAC-GAAG--TAAT--CCCCCGTTTTTTAAT-A-TA---AT-CCATT--G---TC--TA-------------------TG-A-TT-CATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT--------TCCCGC---C-------------------------TTGCGCTCA--TT-T-A-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATAATTTAACA-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCA----------AAACTACATTTATTTTCAC-AATATAGGG--CCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA-----ATT-T-TTTCAATTA-TG-AAGA-AGATTAT-------TGTTT-AAAA-CTATTTAGCTATTGTG-CAGA--TCAAACAAG-T-TTAAATTGT--AGAACTTT--AAAAGTCCGTAACCAGAAAGAGGATAG-ACTCCACAc
gi|30 : TTTT--T--------TTTGGGGGGT--TT-------T-TTTTTTTTGGATGAACGTT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---ATAGGCCTA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-
gi|31 : TTTTTAGT--------TTTA--------TTATCATTAT-TTTTTTTTTGATGCACGAT-ATT-TCG--TATTGCCAGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GA
gi|32 : tttT-AAA-GTT-ATTTATTG-TACGATAAA-A-ATGCAAT----GCTTTCATTCT--CT-ATA--AT-TTAAGT
gi|33 : taaggATTAC-------TGTTT-GAAAACTTTCTAGCTA--G----AGA--TCAAACAAATTAATCAGTTGT--AGAGCTCT--
gi|34 : GATAGGCAT--GT------GCAATT-CCAAATTCTTCGTTAAAATA------------TT------AATTATTTCCGT-CTTCAt
gi|4 : tTGC-AAATAATCA--AAAA-TT-C--A-CAAATCTTGAACGTTCGTATTACGTAT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TATTTTT--------------A--------TT-------T-TTTTTGTTGGATGCACGAT-ATT--CG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT--AT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT--ATGAA--CGTGATTT-----CA-TTTTGG-AATATTCAA-TGTAAGC-AAGACTACTA-TTATAAAGA-----G-TTTGATT-T--GCAG-CG-G-T--TTTGGAAC---CGG----GGGGGGGGG---GG--GG---G-GGGA-----G-T---T--CA------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCCC-GTTTTTTAAT-A-TA---AT-CCATT--G---TC--TA-------------------TG-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT-----T-CCCCCGC-----------------------------TTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATAATTTAA-ACAATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCA----------AAACTACATTTATTTTCAC-AATATAGGG--CCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTA-TTTTCAGCCTG--GAA--------AGTACCACGAAGA-----T-T-T-TTTCAATTA-TG-AAGA-AGATTAT-------TGTTT-AAAA-CTATTTAGCTATTGTG-CAGA--TCAAACAAG-T-TTAAATTGT--AGAACTTT--AAAAGTCCGTAACCAGAAAGAGGATAG-ACTACACAa
gi|5 : --TTTTGAATGCCTATC-TGGAG-ACTTTATTTA-AATTTCACGTATTTTAGCAAGAAAACCCGCCTCGA-----GGTTTTGCTCCG------GATTAGGGTAAAACTTTTGGAATGATC-------ATGCA--CGATTAGGATAAAT------ATTT----TTTGCGATTA------------------ATTG-TACGATCAA-ATACGCAATATTTGTTTTTATTTT--AC-ATCTCATCTTA--TAATTG-GTACAAAACT-TTC----AT------TAAAG----CT-TT-AAAGGTAATTTGTCCT----AACAGAGATGCGATC--------------------ATCAAAA-TTGCAAGCCATTTTTATTTGC-A--TA-TCAT-AAAA-TTTC--C-CAAATCTTGAACGTTCG-ATCACGTGT-TTGGATGATATGTAT-----------TTATGAA-TGGCTC-CGGGGTGAAATTGACGGCG---------------------A--------TT-------T-TTTT-----AATGCACGAT-ACT-GCG--TTTTGCCTGAAAC-------------A-ATC--A------------------CTTGA------TA--AAGGATATC--ACAAACGG-----------GTACA-TTT-GTT-------------ACT---AAA--CTAT-CA-GTGTAT-CATGAAA-CATGATTC-----CA-TTTTGGGTATGTTCAA-TATAAGCTA-GACTACTA-TTATAAAGA-----G-TTTAATT-T--GCAG-TG-G------TGTA------------GGGGGGGGG---GG--GG---G-GGGT-----GACC-TT--CCCAATCAAAA-----CAGT-AA-A-A--AA-----------G-AATTTT-------TTA-T-TTTT---TC-AACCGATAGTGTTTTGAT-ATTCGGTCAAC-GAAG--TAAG--CCC--GCTTTTTGAT-T-TA---TT-TCATC--G---CCTATG-----ATTTC-CACCGT-CTT-A-ATTCAT-------------------TGAAATTA----TG-TATG--AATG-T-TCATAATTTGT-AGCGTTGC-CCCC
gi|6 : --AC---CGGT-ATTGAT-T-GCAAA-TTTTGTCT-CTTT-A-T-TAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTAATTT-----CA-TTTTGGGAATATC--AATGTAAGCAA-GTCTACTA--TAT-AAGA-----G-TTTGATTAT--GCAGTTG-GGT--TTTGGA------GGAAACGGGGTGGGG---GG--GG---G-GGGT-----G-T---T--TC------AGA-----C-GTCAA-A-G--AAC---------TG-ACCTTTA-----CCCA-TGTTTT---TCAAAGCGATAAGTT--TGAT-G-------AAC-GAAAGTTAAT--CCT--GCTTTTTCAT-ATTA---ATCCCATT--GATTTT--TG-----A-TTT-CACTGT-CTA-ATTTTCATTAAGTCAAAT-TTT--AA-TGAAGTTAGATTTGTTTTGAAAATT-T-TCG-AA-TTGT-ATCATTGC-CCCCC-C---CCC-------------CCCCCACCTTTTTTGCTCACCTT-TAA-TCTTCAGATTTT-TCTGC---AGCAGAATTTTTAGTTC-TGT-AT-A-CCACC-ATGT-TCTATTCAAATAATTTTAA-C-AATATGTACAGTTGACGATGACTGTCAATATTA-TATATTTATATTTGTTT--TAAAAAACTTCATCTCG-CGTTCA-TGTAC--CGTGATCAATCTACA-TAATTTTCACAAACATAGGG-CCCCA----------------------CCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------ATTACCACGAAGA-----A-T-TCTTTCAATTA-TGAAAGT-AGATTAT-------TATTT-TAAA-ATATCAAGTTA-TGTGACAGAATTCAAACAAG----TAAATTGT--AGAACTTT--A
gi|7 : CGATTCCAAAAAAGTCGCG-CATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAGCGATAGC-TTG---GC-ATCACACCTGT-T----GCGATAGGCATA-GT------TCGC-T-CCAA--TC-------------------------T------AATGA-TTCCGTACTTAAGTTCTTGATTAATTTT-GTTAC-CAATTAAAAAACGGAAGCG-TCAG--TTTTAAATGAGTGTATTGGAGAATTTTATTTC-GA-TTCCCGTATTT--GC-AGAA-ACCCG-CTCG--TGAAG-TTTTGCTAC-------GAC-AGG--------ATTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCAATTAGG-ATAAAA-GTTCGTTTATTG-TACGATC-A-ATATGCAAT----G-TTTCATTTTTAGT-ATC--GT-TTAAATATTTG-ATA-ACAACC-TTTCGATATCAAAGATAAAATATCTT-AT-AAAGGGAATTTATGCT----A---GAGATGCAATCGACGTCATGATCGAGATATCACCAAC--TGGTAAACCC-TGTTATTTGCAAAATAA-CATAAAAA-TT-CCAA-CAAATCTTGAACGTTCGTATCACGCAT-TTGGAT-TTATGTATAG---T---ATTTATGAATTTACAT-CGTAGTGAAATTGACGGC-TATTTTT--T--------TTTAGTTTATTTTT-------T-TTTTTTTTGGATGCACTA--ATTACCG--TGTTGCCTGAAAA-------------AGA----A------------------T---A------TA--AA-TAC-TC--AT---CGGTAAT-GAT-T-GCAAA--TT-GTCT-CTT
gi|8 : AT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TATTTTT--T-----------A--------TT-------T-TTTTTGTTGGATGCACGAT-ATT-TCG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT--AT-T-GCAAA-TTT-GTCT-CTTT-A-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAA-TGTAAGC-AAGACTACTA-TTATAAAGA-----G-TTTGATT-T--GCAG----GGT--TTTGGAACCGGGGG----GGGGGGGGG---GG--GG---G-GGG------G-GA-GT--TCA-----AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAATCCCCC--GTTTTTTAAT-A-TA---AT-CCATT--G---TC--TA-------------------TG-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT-----T-CCCCCGC-----------------------------TTGTGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATA-TGTAATA-GATAT----
gi|9 : ACGATTCC-AAAAAGTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGC---------------A---GTGT----GCAATAGGCAT--GT------TCGCTT-CCAA--TC----------TACTCATTAAAATATT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-G-TAA-CAATTAAATA--GGAAGCG-TCAG--TTTTAAATGACTATA-TGGAG-ATTTTATTTT-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG--ACAGCTAC-------GAC-AGA--------TTTGGAATGCTTGTTACAAATGCA--CGATTAGGGTAAAA------A---AAAATTCACAATTTGG-GT-AAA-GTT-ATTTATTG-TACAATCAATTTACACAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAACTG-ATATACAAC--TCTCG--ATC-AAGCTAAAA-ATATT-TT-AAAGGGAATTTATACT----A---GAGATGCGATCGACGTCATGA--GAG--ATCACCAACA-TTGTAAACCCTTTTTA
Alignments
lowQualScore : 11111 33333333333333 1111 11 111111 88888888888888888888888888888888 22222222 22222222 22222 222222222222222 1 11 22222 1111 11 11111 11 5555555 666666666666666666666666666666 11 333333333333333333333333333333333333333333333333333333 11111 222 222 3333333 2222 111111 55555555555555555555555 11111 111111111 11111 1111111 11 4444444444444444444444444 1 3333333 88888888888888888888888888888 111 1 111 11111 1 2222 1 111 11 1 5555555555 11 1111 22222222 22222222222 1 1111111 11 222222 11 111 1
lowQualScore : 5 22222 4 4 44444444444444 99 0000 00 222222 4 0 66 55555555555555555555555555555555 5 5 5 5 1 99 6 77 6 5 5 5 5 55 6 0 55 55555555 5 66666666 33333 66 999999999999999 4 4 4 4 4 8 1 9999 2 66 4 66 4 5 0 22 00000 66 4 77 1 55 5 5555 777 6 3 22 33333 4 0 4 0 3 00 4 8 6666 2 3 1111111 3 3 2 999999999999999999999999999999 3 3 3 00 44 777777777777777777777777777777777777777777777777777777 3 44 555 2 33 3 3 3 6 66 8 3 55 3 7 3 8 00000 4 000 555 44 7777777 3 55 3 3 1111 777777 7777 666 55 666 3 66666666666666666666666 22222 3 3 3 9999 888888888 3 99999 3 2 777 4 77777 4 3333333 4 55 666 99 1 4 4 777 8 55 777 11 6666666666666666666666666 4 4 5 66 4 00 5 3 0 5 5 5555555 3 11111111111111111111111111111 1 77 5 5 5 5 5 4 000 0 77 0 5 5 4 5 5 8 999 77777 0 2 1111 0 777 3 33 3 0 5555555555 1 0 1 0 6 7 66 6 4444 2 6 6 77 00000000 1 22222222222 5 1 5 4444444 11 333333 11 0 666 5 66 0 66 0 33 0
lowQualScore : . ..... . . .............. .. .... .. ...... . . .. ................................ . . . . . .. . .. . . . . . .. . . .. ........ . ........ ..... .. ............... . . . . . . . .... . .. . .. . . . .. ..... .. . .. . .. . .... ... . . .. ..... . . . . . .. . . .... . . ....... . . . .............................. . . . .. .. ...................................................... . .. ... . .. . . . . .. . . .. . . . . ..... . ... ... .. ....... . .. . . .... ...... .... ... .. ... . ....................... ..... . . . .... ......... . ..... . . ... . ..... . ....... . .. ... .. . . . ... . .. ... .. ......................... . . . .. . .. . . . . . ....... . ............................. . .. . . . . . . ... . .. . . . . . . . ... ..... . . .... . ... . .. . . .......... . . . . . . .. . .... . . . .. ........ . ........... . . . ....... .. ...... .. . ... . .. . .. . .. .
lowQualScore : 0 55555 4 4 55555555555555 55 6666 66 888888 4 2 99 66666666666666666666666666666666 0 0 0 0 0 22 7 99 6 7 7 7 0 88 2 4 44 66666666 0 99999999 88888 99 666666666666666 4 4 4 4 4 0 2 4444 4 11 4 11 4 7 6 99 00000 44 7 11 3 55 0 6666 888 4 9 22 77777 4 1 4 4 6 88 4 9 9999 9 6 0000000 6 6 1 888888888888888888888888888888 3 2 1 99 66 666666666666666666666666666666666666666666666666666666 3 22 444 9 66 1 1 1 2 22 7 6 00 6 3 6 0 00000 0 000 000 88 1111111 6 00 6 6 3333 111111 7777 444 00 444 6 44444444444444444444444 77777 6 6 6 7777 222222222 6 11111 6 2 000 0 00000 0 0000000 0 55 222 55 0 0 0 000 0 55 000 00 8888888888888888888888888 4 4 4 11 4 22 0 2 0 0 0 5555555 0 33333333333333333333333333333 4 99 7 7 7 7 7 3 000 1 99 4 7 7 3 7 5 8 888 88888 0 5 2222 0 555 2 88 2 0 2222222222 0 8 4 8 7 3 00 7 2222 5 7 7 99 77777777 6 99999999999 7 4 7 4444444 00 111111 99 8 444 0 99 4 99 6 55 0
consensus : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGCTTTG---GC-ATCGCAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-CCAA--TC----------TA------------TT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AC-CAATTAAANA--GGAAGCG-TCAG--TTTTAAATGANTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTT-GCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCGATTAGG-GT-AAA-GTT-GTTTATTG-TACGATCAA-ATACGCAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAATTG-ATATACAACT-TTTCG--ATC-AAGATAAAA-ATATT-TT-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AAATAATCAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTGGTGAAATTGACGGCGTA-TTTTT---------TTTA--------TTT-TTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAAATGTAAGC-A-GACTACTA-TTATAAAGA-----GATTTGATT-T--GCAG-TG-GGT--TTTGGAAC--GCGG----GGGGGGGGG---GG--GG---G-GGGT-----G-TC-GT--CC------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCC--GTTTTTTNAT-A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGT-CTA-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATC-TTGC-CCCCCGC---CCC-------------CCCCC----TTTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATANTTTAA-A-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCAC--C-TGATCAANCTACATTAATTTTCAC-AATATAGGG-CCCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA-----A-T-T-TTTCAATTA-TG-AAGT-AGATTAT-------TGTTT-AAAACTATCTAGCTA-TGTG-CAGA--TCAAACGAGTT-TTAAATTGT--AGAACTTT--AAAAGTCAGTAACCAGNAAGAGGATAG-ACTACACA
Reference ( family-1197 ) : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGCTTTG---GC-ATCGCAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-CCAA--TC----------TA------------TT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AC-CAATTAAANA--GGAAGCG-TCAG--TTTTAAATGANTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTT-GCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCGATTAGG-GT-AAA-GTT-GTTTATTG-TACGATCAA-ATACGCAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAATTG-ATATACAACT-TTTCG--ATC-AAGATAAAA-ATATT-TT-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AAATAATCAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTGGTGAAATTGACGGCGTA-TTTTT---------TTTA--------TTT-TTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAAATGTAAGC-A-GACTACTA-TTATAAAGA-----GATTTGATT-T--GCAG-TG-GGT--TTTGGAAC--GCGG----GGGGGGGGG---GG--GG---G-GGGT-----G-TC-GT--CC------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCC--GTTTTTTNAT-A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGT-CTA-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATC-TTGC-CCCCCGC---CCC-------------CCCCC----TTTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATANTTTAA-A-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCAC--C-TGATCAANCTACATTAATTTTCAC-AATATAGGG-CCCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA-----A-T-T-TTTCAATTA-TG-AAGT-AGATTAT-------TGTTT-NAAACTATCTAGCTA-TGTG-CAGA--TCAAACGAGTT-TTAAATTGT--AGAACTTT--AAAAGTCAGTAACCAGNAAGAGGATAG-ACTACACA
gi|1 : ACGATTC--AAAA-GTCGCGCCATCGAGTTACGTCCCTATTTT-----GTGACGATCAAACGAG-GATAGCTTTG---GCTATCACAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-C--A--TC----------C--------------T------AATGATTTCCGT-ATTCAGTTCTTGATTAATTTTTGT-ACGCAATTAAAAA--GGAAGCG-TCAG--TTTTAAATGAGTGTAT-GGAGA-TTT-ATTTCCGATTTCCCGTATTT-AGCAAGAAAGACCGCCTCGATCGAAGTTTTTGCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAA--TCGCAATTAGGTAT-AAAAGTT-GTTTATTG-TACGATCAA-ATATG-AAT----GTTTTCATTTT--A--ATC--GT-TTAAATAATGGGATATACAACTGTTTCG--ATC-AAGATAAAA-ATATTATTGAAAGGGAATTTATGCT----A---GAGATGCAATCGACGTCATGATCGAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AATAAAACAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGCAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTAGTGAAATTGACGGCATA-TTTTTTTGTGTTTATTTA--------TTT-TTTTTTTTGGATGCACGAT-ATT-CCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTA--TC--AT---CGGT-AT-GATGTGGCAAA-TTTGGTCT-CTTTTAGGACAACTGCAAAA--CTAT-TA-GTGTACGCATGAAAGCGTGATTT-----CA-TTTTGGGAATAATC--ATGTAAGC-A-GAC-ACTATTTATAAAGAGCCACGATTTGATT-T--GCAG-TGTGGTTGTTTGGAAC--GCGG----GGGGGGGGG---GG--AG---G-GGGT-----G-TCAGT--CC------AGA-----G-AT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TA-TTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCC--GTTTACTCA--A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGT-CTACA-TTTCATTAAGTC-AAT-T-T--AATTG----CAGA-TTG-TTTGAACATGTT-TCGTAATTTGT-ATCTTTGCGCCCCCAC---TCC-------------CTCCC----TTTGTGCTCA--TT-TAA-TC-TCAGA-TTTGTCTGC---TGCAGAA--TTTAGTTCATGTAATAAGCCATCGATGTCTCT-TTCAAAATATTTTAA-A-AATA-----AA-TGACAATGACTGT-A----TATTATAC---TA--TATTTAAAAAAAAACTTCATCTCGACGTTCATTGTACTTC-TGATCAATGTACATTAA-TTTCAC-AAT-TAGGGCCCCCAACTCTGTT----ACTGCTGGAT-CGATGGAAGCT-AATTATTTTTCAACCTG--GAA--------AGTACCACGAAGA-----A-T-C-TTTCAATTA-TG-AAGTAAGATTAT-------TGTTT-TAAACTATCTAGCTA-TGTG-CAGAG-TCAATCGAGTT-TTAAATTGT--AGAACTTTAAAAAAGCCATTAA-CAGCAAGAGGATAACACTACACA
gi|10 : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGC---------------A---GTGT----GCAATAGGCAT--GT------TCGCTT-CCAA--TC----------TACTCATTAAAATATT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AA-CAATTAAATA--GGAAGCG-TCAG--TTTTAAATGA-TATAT-GGAGA-TTTTATTTT-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGACA--GCTACG-------AC-AGA--------TTTGGAATGCTTGTTACAAATGCA--CGATTAGGGTAAAA------A---AAAATTCACAATTTGG-GT-AAA-GTT-ATTTATTG-T-CAATCAATTTACACAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAACTG-ATATACAAC--TCTCG--ATC-AAGCTAAAA-ATATT-TT-AAAGGGAATTTATACT----A---GAGATGCGATCGACGTCATGA--GAG--ATCACCAACA-TTGTAAACCCTTTTTA
gi|11 : cT-AT-TAT-T-GCAAA-TTT-GTCA-CTTT---------------A--CTAT-CA-GTGTAC-CATGAAA-CATGATAT-----CA-TTTTGGGAATGTTC-AATGTAAGCTA-GAATACTA--GATTAAGA------ATTTTATT-T--CCA--TT-GGT--CTTGGACC--GTGG----GGAGGGGAG---GG--GG---T-TGATCCTTAC-CC-AC--CC------ACACCACCC-CT-AACA-A--AACATAACTTACTG-ACCTTTA-----CCCA-CCTTTTCGATC-AAGC----------------------------AAG--TAA---GCC--GTTCTTTAAT-A-TATCGGG-CCACT--G---CC--TAGATGTA-TTCTCATTA--CTA-A--TTCACTTAATC-AATATTT--AA-T-AAGTTAAATTTG-TTTAAAAATGATGTTGTATTTTGT-AAC-ACCC-CCCCCGCACTCCCACCACCCCACCCACCCCC----CATGTG-TTA--TTGTAATTT-TCGGA-TTT-TCC-C---AGGGAGA--TTT----CA-GA-AT-A--TATT-ATGTTTCTA
gi|12 : ggagatgcgatcatgattatcatttattttaaCGCATATTGGATGTTATGTACAG-----A-ATTTATGAA-TTACTTGCG-GGTGAA-TTTATGGCG--------------------A--------TTT-TTTCTCTTA-AT-CACGAT-ATG--CG--TGTTGCCTGAAAC-------------A-A----AGGAAATCACAAACGTGGGT---A------CAGTAGTTAT-TCTTAA---TTTT-AT-GAT-T-GCAAAATTT-GTCC-CTTTTA-TACAATTGTAAAA--CTGT-CA-GTGT---CATGAAAACGTGATTT-----CAATTTTGGGAATGTTCAA-TGTATGC-TTGACTGCTA-TTATAAAGA-----AATTT-ATT-TTTGCAG-TG-G-T--GTTGGAAC--GCGG----GGGGGGGGGTAAGGTCGGACTG-AGAC-----G-AC-CC--CCATACAAAGAG----C-GT-AA-A-GTTAAT---------TGTACCGTTACCTCGCCCACTCGTTT---TC-------TAG-----TGTTCG-------AAT-CACG--TAAG--TTA--GTCCTTTTATAA-TA---GTCCCATTGCG---TA--TG-----ATTTC-CATAGTCCTA-A--TTCATTTAATC-AAT-TTTTAAA-TGactaaagaattaaacaa
gi|13 : T-AGCAAGATAGCCCGTCTCGA----ATTTTT-GCTGCGCATTGGGGT-AAACAT-----TTTCGAATGTTT-------ATGTG--GGAGTAAGGTAAGGCTTTTTA--------TCGCGATTAGG-GT-AAA-GTT-ATTTATTG-TACCATCAA-CTATGCAAT----TCTTTGATTTT--AT-ATC--AT-CTAAATGAGTG-ATAGAAAACT-TT----------------------------AAAGGGAATTCACGCCTAGCA---GAGATGC-ATCGATGC----A--AAGATA--ACCAATA-TTGTAAACC---TTTATTTGC-ATATAATCAT-AA-----------CAAATCTTGAACGTT-GTATCACGTAT-TTGGATGTTATGTACAA---AAC-ATT-ATTAA-TTACTC-CG-----ACATTGTAGGCG--------------------A--------TTT-TTTCTT---GATGCACGATAAAT-ACGCCTGTTGTCTGcgttgtt
gi|14 : TTAT-------TGTTT-TAAACTATCTAGCTA-TGTG-CAGA--TCAATCGAGTT-TT-AATTGT--AG-ACTTG--AAAAGCCAATTACCA-CAAGAGGATAA-ATTACACA
gi|15 : gattttttattatttcgcttaatactgTCAGTTCTTGATTAATTTT-GT-AC-CAATTAAAAA--GGAAGCG-TCAG--TTTTAAATGAGTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTT-GCTAC-------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAA-TCGCAATTAGG-AT-AAA-GTT-GTTTATTG-TACGATCAA-ATATGCataatgcatggacatcctctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaatgctaaaatgcgaatctttacatatacaggcgtaccctcttctttctccctcctaagttgtcatactgagtcggaacaaaaatgat
gi|16 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGCCACATGAATTTTCAC-AATATTGTG-TTCGAA-TCAGTT----ACTTCTGGAT-----GGAAGCT-AAC-ATTTCACAACCTG--GAA--------AGAACCCCGAAGA-----A------TTCAGTTA-TG-AAGT-AGATTATATAGTGCTGTTCAAAAACTATCTAGCTA------CAGA--T-AGATGA--T-TTGATTCATCAACAACTTT----CAGTCAGCAAC
gi|17 : ACGATTCCAAAAA-TTCGCGCCATC----------CCTTATTT-----GTGACG-TCAAACGAG-GATAGCTGTGTA-GA-A----AC-TGCGTTACAGCGATAGGCAT--GTTATAAATTACTCATTAA--AA----------TA------------TT------AATGATTTCCGT-TTTCAGTTCTTGATTAACTTT-GT-AC-CATTTA
gi|18 : gtatacATTTATGCTCT--A---GAGATGTGATCGACGTCATGA--GAGAT--------CA--------CCCTTTATATTTGG-AAATAATCAT-AAAAATT-C--A-CAAATCTTGAACATTTGTATCACGTAT-TTGG-----GTGTATAG-----A-ATTTATGAA-TTAGGC-CGTGGTGAAATTGACGGC-TA-CTTTT---------TTT
gi|19 : GATTTAAAAAA-GTCGCGACATAAAGTTACGTTCCTTATTT-----GTGACG-TCAAACGAG-GATAGCT
gi|2 : ttttccgaaatcataaaatattttgtaggtatcccttttaaggtctcctgacatcagtacaattgtcaatggtgtagcaaacatgacataACGATTCCAAAAA-GTCGCGCCACCGAGTTACGTCCCTTATTT-----GTGACG-TCAAATGAG-GATAGCTTTG---GC-ATCACAC-TGTGT----GCGATAGGCATACAT------TCGCTT-CCAA--TC-------------------------T------AATGATTTCCGT-ATTCAGTTTCTGATTTATTT---T-AC-CAATTAAATA--GGAAGCGTTCAGGTTTTTAAATGACTATAT-GGAGA-TTTTATTTC-GATTTCCCGTA-TT-AGCAAGA--ACCC-CCTCGATCGAAGTTTT-GCTAT-------GAC-AGA--------TTTGGAATGCTTG----AAATGCAGTCA--TAGGG-AAAA------A---A----TCGCGATTAGG-GT-AAA-GTT-G-TTATTGATACGATCAA-ATATGCAAT----TGTTTCATTTT--ATAATC--GT-TT-AATAATTG-ATA-ACAACT-TT-----ATC-AAGATAAAA-ATATC-AT-AAAGGGAATATATGCT----A---GAGATGC-ATCGACGTCATGA--GAG--ATCACCAACATTTGTAAACCCTTTTTATTTGC-AAATAAACATAAAAA-TT-C--ACCAAATCTTGAACGTTCGTATCACGCAT-TTGGATGTTATGTATAG---T---ATTTATGAA-TTACTC-CGT-GT-AAATTGACGGC-TA-TTTTT---------TTTAG-------TTTATTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AT---CGGT-AT-GAT-T-GCAAA-TTT-GTCTGCTTTTA-TACAACTGCAAAAACTTAT-TAGGTGTAC-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTC-AATGTAAGC-A-GACTACTA-TTATAAAGAGCCACGATTTGATT-T--GCAG-TG-G----TTTGGAAC---C---------GGAGGG---GG--GG---G-GGGT-----------T--CA------AGA-----C-G----------------------------TTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AACGGAAG--TAAT--CCC--GTTTTATCAA-A-TA---AT-CCATT--G---TC--TG-----A-TTC-----------------CATTAAGTC-AAT-TTT--AA-TGAAGTTAG-TTTG-TTTG-AAATG-T-TCGTAATTTGTAATC-TTGT-CCTCCCC---CCT-------------TCCCT----TTTGTGTTCA--TT-TAA-TC-TCAGA-TTT-TCT-CTCTAGC-GAA--TTTAGTTCATGT-AT-AGCCATC-ATCTCTCTATTCAA
gi|20 : acTTTGATT-T--GCAG-TG-G-T--TTTGGAAC--GGGG----TGGGGGGTG---GG--GG---GTGGGG-----G----GT--CA------AGA-----C-GT-AA-A-T--AAC---------TG-ACCTTTA-----CCCA-TAT-----------------------TGAT-A-------AAT-GAAG--TAAT--CCC--GTTCTTTCAT-A-TA---AT-CCACT--A---TCTATG-----A-TTC-CATTGT-CTA-A-TTT
gi|21 : gTTCAC-GAT-TAGGG-CA--AAGTCATTTTTCTACATCTCGATCTGATGGGAGCTTGATTGTTTTTCAACCTGACGCAGCTACTGTAGTACCCCGAAGAGCAGTA-C-T-GCT-AATTACTGTAAGT-ACATAAT-------TGTT
gi|22 : ACGATCAA-ACATACAAT----GTTTTCATTTT--AT-ATC--GT-TTCAA
gi|22 : agtaT-TT-AAAGGGAATAGTTGTT----A---GAGATGCAATCGACGT--------AGATATAACCAATA-TTGTTAACCTTTTTTATATGC-Agctttaaagggaatagttgttagagatgcaatcgacgtagatataaccaatattgttaaccttttttatatgcata
gi|23 : agtaacgatcaaacatacaatgttttcattttatatcgtttcaagcAT-AAAA-TTTC--A-CAAGTCTTGAACGTT-GTATGACGTAT-TTGGACGTTATCTATAG-----A-ATTTATTAA-TTACTC-CGTGATGCCATTGGCGACG--------------------A--------TTT-TTTTTTCTTGATGCACGAT-ATT-ta
gi|24 : ACAAT-AAT-GCA--TGTTCCCTGAAACTAGGTAATTACAAA-AGGTGA------------------T---A------TA--TATCAC-TT--AT---T--T-CT-GAT-T-GCAAA-TTT-GTCA-GTTTTA-CACAATTTTAAAA--ATAT-CT-GTGTAT-CAGGAA
gi|25 : G-TCAAACGAG-GATAGCTGTGTAGAA-ATTGCAT-TACG-----GCGATAGACAT--GA------TCGCTT-CTCA--TT----------TA------------CTCAATGTAATGATTTCCCT-CTTCAGTTCTTGATTAACTTT-GT-AC-GAATT
gi|26 : ----A------------------T---A------TA--AATCAT-TT--AT---C--T-AC-GAT-T-GGAGA-ATT-GACA-CTTTGA-TACAACTGTTAAC--CTATATATCTGTAT-CACGAAA-AGTGATTTTTTTCTA-TTTTGG--ATATCCA
gi|27 : aaacggggTTCAAACTG--GAA--------AGTGCCTCAAAGA-----A-TGT-TTTCAAC-A-CG-AAGT-AGATTAC-------TGTTT-AAAACTATCTAGCTA------CAGA--TCAATCAAGTTGTTCAGTTGT--AGTACTCT--
gi|28 : tgGATTCCAAAAA-GTCGCGTCATCGAGTTACGACCCTTATTTATTTTGTGACG-TTAAACGAG-GATAGCTTTA---GC-ATCGCAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-C
gi|29 : TA-TTATAAAGA------ATTTAATT-T--GCAG-TG-GCC--TTTGG-CC--GCGG----CGGGTGGGG---GT--GG---G-GTGT-----C-TC-GTAACT------TTA-----C-GT-AA-ACGC-AACG--------TA-ACCTTTA-----CCCA-
gi|3 : TGC-AAATAATCA--AAAA-TT-C--A-CAAATCTTGAACGTTCGTATTACGTAT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TA-TTTTT---------T--A--------TTT-TTTTGTT-GGATGCACGAT-ATT-TCG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAA-TGTAAGC-AAGACTACTA-TTATAAAGA-----G-TTTGATT-T--GCAG-CG-G-T--TTTGGAA-----GG----GGGGGGGGG---GG--GG---G-GGGA-----G-T---T--CA------AGA-----C-GT-AA-A-G--AAC---------TG-AC-TTTA-----CCCA-TATTTT---TC-AAGCGATAT-----TGAT-G-------AAC-GAAG--TAAT--CCCCCGTTTTTTAAT-A-TA---AT-CCATT--G---TC--TA-------------------TG-A-TT-CATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT--------TCCCGC---C-------------------------TTGCGCTCA--TT-T-A-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATAATTTAACA-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCA----------AAACTACATTTATTTTCAC-AATATAGGG--CCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA-----ATT-T-TTTCAATTA-TG-AAGA-AGATTAT-------TGTTT-AAAACTATTTAGCTATTGTG-CAGA--TCAAACAAG-T-TTAAATTGT--AGAACTTT--AAAAGTCCGTAACCAGAAAGAGGATAG-ACTCCACAc
gi|30 : -TTTTT---------TTTGGGGGGT--TTT-TTTTTTTTGGATGAACGTT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---ATAGGCCTA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-
gi|31 : TA-TTATC---------ATTA--------TTT-TTTTTTT--GATGCACGAT-ATT-TCG--TATTGCCAGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GA
gi|32 : ttttttttagtttTAAG-GT-AAA-GTT-ATTTATTG-TACGATAAA-A-ATGCAAT----GCTTTCATTCT--CT-ATA--AT-TTAAGT
gi|33 : ATTAC-------TGTTTGAAAACTTTCTAGCTA--G----AGA--TCAAACAAATTAATCAGTTGT--AGAGCTCT--
gi|34 : GATAGGCAT--GT------GCAATT-CCAAATTCTTCGTTAAAATA------------TT------AATTATTTCCGT-CTTCAt
gi|4 : tTGC-AAATAATCA--AAAA-TT-C--A-CAAATCTTGAACGTTCGTATTACGTAT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TA-TTTTT------------A--------TTT-TTTTTGTTGGATGCACGAT-ATT--CG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT--AT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT--ATGAA--CGTGATTT-----CA-TTTTGG-AATATTCAA-TGTAAGC-AAGACTACTA-TTATAAAGA-----G-TTTGATT-T--GCAG-CG-G-T--TTTGGAAC---CGG----GGGGGGGGG---GG--GG---G-GGGA-----G-T---T--CA------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCCC-GTTTTTTAAT-A-TA---AT-CCATT--G---TC--TA-------------------TG-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT-----T-CCCCCGC-----------------------------TTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATAATTTAA-ACAATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCA----------AAACTACATTTATTTTCAC-AATATAGGG--CCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTA-TTTTCAGCCTG--GAA--------AGTACCACGAAGA-----T-T-T-TTTCAATTA-TG-AAGA-AGATTAT-------TGTTT-AAAACTATTTAGCTATTGTG-CAGA--TCAAACAAG-T-TTAAATTGT--AGAACTTT--AAAAGTCCGTAACCAGAAAGAGGATAG-ACTACACAa
gi|5 : --TTTTGAATGCCTATCT-GGAGA-CTTTATTTA-AATTTCACGTATTTTAGCAAGAAAACCCGCCTCGA----GGTTTT-GCTCCG------GATTAGGGTAAAACTTTTGGAATGATC-------ATGCA--CGATTAGGATAAAT------ATTT----TTTGCGATTA------------------ATTG-TACGATCAA-ATACGCAATATTTGTTTTTATTTT--AC-ATCTCATCTTA--TAATTG-GTACAAAACT-TTC----AT------TAAAG----CT-TT-AAAGGTAATTTGTCCT----AACAGAGATGCGATC--------------------ATCAAAA-TTGCAAGCCATTTTTATTTGC-A--TA-TCAT-AAAA-TTTC--C-CAAATCTTGAACGTTCG-ATCACGTGT-TTGGATGATATGTAT-----------TTATGAA-TGGCTC-CGGGGTGAAATTGACGGCG--------------------A--------TTT-TTTT-----AATGCACGAT-ACT-GCG--TTTTGCCTGAAAC-------------A-ATC--A------------------CTTGA------TA--AAGGATATC--ACAAACGG-----------GTACA-TTT-GTT-------------ACT---AAA--CTAT-CA-GTGTAT-CATGAAA-CATGATTC-----CA-TTTTGGGTATGTTCAA-TATAAGCTA-GACTACTA-TTATAAAGA-----G-TTTAATT-T--GCAG-TG-G------TGTA------------GGGGGGGGG---GG--GG---G-GGGT-----GACC-TT--CCCAATCAAAA-----CAGT-AA-A-A--AA-----------G-AATTTT-------TTA-T-TTTT---TC-AACCGATAGTGTTTTGAT-ATTCGGTCAAC-GAAG--TAAG--CCC--GCTTTTTGAT-T-TA---TT-TCATC--G---CCTATG-----ATTTC-CACCGT-CTT-A-ATTCAT-------------------TGAAATTA----TG-TATG--AATG-T-TCATAATTTGT-AGCGTTGC-CCCC
gi|6 : --AC---CGGT-ATTGAT-T-GCAAA-TTTTGTCT-CTTT-A-T-TAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTAATTT-----CA-TTTTGGGAATATC--AATGTAAGCAA-GTCTACTA--TAT-AAGA-----G-TTTGATTAT--GCAGTTG-GGT--TTTGGA------GGAAACGGGGTGGGG---GG--GG---G-GGGT-----G-T---T--TC------AGA-----C-GTCAA-A-G--AAC---------TG-ACCTTTA-----CCCA-TGTTTT---TCAAAGCGATAAGTT--TGAT-G-------AAC-GAAAGTTAAT--CCT--GCTTTTTCAT-ATTA---ATCCCATT--GATTTT--TG-----A-TTT-CACTGT-CTA-ATTTTCATTAAGTCAAAT-TTT--AA-TGAAGTTAGATTTGTTTTGAAAATT-T-TCG-AA-TTGT-ATCATTGC-CCCCC-C---CCC-------------CCCCCACCTTTTTTGCTCACCTT-TAA-TCTTCAGATTTT-TCTGC---AGCAGAATTTTTAGTTC-TGT-AT-A-CCACC-ATGT-TCTATTCAAATAATTTTAA-C-AATATGTACAGTTGACGATGACTGTCAATATTA-TATATTTATATTTGTTT--TAAAAAACTTCATCTCG-CGTTCA-TGTAC--CGTGATCAATCTACA-TAATTTTCACAAACATAGGG-CCCCA----------------------CCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------ATTACCACGAAGA-----A-T-TCTTTCAATTA-TGAAAGT-AGATTAT-------TATTT-TAAAATATCAAGTTA-TGTGACAGAATTCAAACAAG----TAAATTGT--AGAACTTT--A
gi|7 : CGATTCCAAAAAAGTCGCGC-ATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAGCGATAGCTT-G---GC-ATCACACCTGT-T----GCGATAGGCATA-GT------TCGCT--CCAA--TC----------TA---------------------ATGATT-CCGTACTTAAGTTCTTGATTAATTTT-GTTAC-CAATTAAAAAACGGAAGCG-TCAG--TTTTAAATGAGTGTATTGGAGAATTTTATTTC-GATT-CCCGTATTT--GCA-GAA-ACCCGC-TCG--TGAAGTTTT-GCTACG-------AC-AGG--------ATTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCAATTAGG-ATAAAA-GTTCGTTTATTG-TACGATC-A-ATATGCAAT----G-TTTCATTTTTAGT-ATC--GT-TTAAATATTTG-ATA-ACAACC-TTTCGATATCAAAGATAAAATATCTT-AT-AAAGGGAATTTATGCT----A---GAGATGCAATCGACGTCATGATCGAGATATCACCAAC--TGGTAAACCC-TGTTATTTGCAAAATAA-CATAAAAA-TT-CCAA-CAAATCTTGAACGTTCGTATCACGCAT-TTGGAT-TTATGTATAG---T---ATTTATGAATTTACAT-CGTAGTGAAATTGACGGC-TATTTTTT---------TTTAGTTTATTTTTT-TTTTTTTTGGATGCACTA--ATTACCG--TGTTGCCTGAAAA-------------AGA----A------------------T---A------TA--AA-TAC-TC--AT---CGGTAAT-GAT-T-GCAAA--TT-GTCT-CTT
gi|8 : AT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TA-TTTTT---------T--A--------TTT-TTTTTGTTGGATGCACGAT-ATT-TCG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT--AT-T-GCAAA-TTT-GTCT-CTTT-A-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAA-TGTAAGC-AAGACTACTA-TTATAAAGA-----G-TTTGATT-T--GCAG----GGT--TTTGGAACCGGGGG----GGGGGGGGG---GG--GG---G-GGG------G-GA-GT--TCA-----AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAATCCCCC--GTTTTTTAAT-A-TA---AT-CCATT--G---TC--TA-------------------TG-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT-----T-CCCCCGC-----------------------------TTGTGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATA-TGTAATA-GATAT----
gi|9 : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGC---------------A---GTGT----GCAATAGGCAT--GT------TCGCTT-CCAA--TC----------TACTCATTAAAATATT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AA-CAATTAAATA--GGAAGCG-TCAG--TTTTAAATGACTATAT-GGAGA-TTTTATTTT-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG-ACA-GCTAC-------GAC-AGA--------TTTGGAATGCTTGTTACAAATGCA--CGATTAGGGTAAAA------A---AAAATTCACAATTTGG-GT-AAA-GTT-ATTTATTG-TACAATCAATTTACACAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAACTG-ATATACAAC--TCTCG--ATC-AAGCTAAAA-ATATT-TT-AAAGGGAATTTATACT----A---GAGATGCGATCGACGTCATGA--GAG--ATCACCAACA-TTGTAAACCCTTTTTA
Alignments
lowQualScore : 11111 33333333333333 1111 11 111111 88888888888888888888888888888888 22222222 22222222 22222 222222222222222 1 11 22222 1111 11 11111 11 5555555 666666666666666666666666666666 11 333333333333333333333333333333333333333333333333333333 11111 222 222 3333333 2222 111111 55555555555555555555555 11111 111111111 11111 1111111 11 4444444444444444444444444 1 3333333 88888888888888888888888888888 111 1 111 11111 1 2222 1 111 11 1 5555555555 11 1111 22222222 22222222222 1 1111111 11 222222 11 111 1
lowQualScore : 5 22222 4 4 44444444444444 99 0000 00 222222 4 0 66 55555555555555555555555555555555 5 5 5 5 1 99 6 77 6 5 5 5 5 55 6 0 55 55555555 5 66666666 33333 66 999999999999999 4 4 4 4 4 8 1 9999 2 66 4 66 4 5 0 22 00000 66 4 77 1 55 5 5555 777 6 3 22 33333 4 0 4 0 3 00 4 8 6666 2 3 1111111 3 3 2 999999999999999999999999999999 3 3 3 00 44 777777777777777777777777777777777777777777777777777777 3 44 555 2 33 3 3 3 6 66 8 3 55 3 7 3 8 00000 4 000 555 44 7777777 3 55 3 3 1111 777777 7777 666 55 666 3 66666666666666666666666 22222 3 3 3 9999 888888888 3 99999 3 2 777 4 77777 4 3333333 4 55 666 99 1 4 4 777 8 55 777 11 6666666666666666666666666 4 4 5 66 4 00 5 3 0 5 5 5555555 3 11111111111111111111111111111 1 77 5 5 5 5 5 4 000 0 77 0 5 5 4 5 5 8 999 77777 0 2 1111 0 777 3 33 3 0 5555555555 1 0 1 0 6 7 66 6 4444 2 6 6 77 00000000 1 22222222222 5 1 5 4444444 00 333333 11 0 666 5 66 0 66 0 33 0
lowQualScore : . ..... . . .............. .. .... .. ...... . . .. ................................ . . . . . .. . .. . . . . . .. . . .. ........ . ........ ..... .. ............... . . . . . . . .... . .. . .. . . . .. ..... .. . .. . .. . .... ... . . .. ..... . . . . . .. . . .... . . ....... . . . .............................. . . . .. .. ...................................................... . .. ... . .. . . . . .. . . .. . . . . ..... . ... ... .. ....... . .. . . .... ...... .... ... .. ... . ....................... ..... . . . .... ......... . ..... . . ... . ..... . ....... . .. ... .. . . . ... . .. ... .. ......................... . . . .. . .. . . . . . ....... . ............................. . .. . . . . . . ... . .. . . . . . . . ... ..... . . .... . ... . .. . . .......... . . . . . . .. . .... . . . .. ........ . ........... . . . ....... .. ...... .. . ... . .. . .. . .. .
lowQualScore : 0 55555 4 4 55555555555555 55 6666 66 888888 4 2 99 66666666666666666666666666666666 0 0 0 0 0 22 7 99 6 7 7 7 0 88 2 4 44 66666666 0 99999999 88888 99 666666666666666 4 4 4 4 4 0 2 4444 4 11 4 11 4 7 6 99 00000 44 7 11 3 55 0 6666 888 4 9 22 77777 4 1 4 4 6 88 4 9 9999 9 6 0000000 6 6 1 888888888888888888888888888888 3 2 1 99 66 666666666666666666666666666666666666666666666666666666 3 22 444 9 66 1 1 1 2 22 7 6 00 6 3 6 0 00000 0 000 000 88 1111111 6 00 6 6 3333 111111 7777 444 00 444 6 44444444444444444444444 77777 6 6 6 7777 222222222 6 11111 6 2 000 0 00000 0 0000000 0 55 222 55 0 0 0 000 0 55 000 00 8888888888888888888888888 4 4 4 11 4 22 0 2 0 0 0 5555555 0 33333333333333333333333333333 4 99 7 7 7 7 7 3 000 1 99 4 7 7 3 7 5 8 888 88888 0 5 2222 0 555 2 88 2 0 2222222222 0 8 4 8 7 3 00 7 2222 5 7 7 99 77777777 6 99999999999 7 4 7 4444444 88 111111 99 8 444 0 99 4 99 6 55 0
consensus : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGCTTTG---GC-ATCGCAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-CCAA--TC----------TA------------TT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AC-CAATTAAANA--GGAAGCG-TCAG--TTTTAAATGANTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTT-GCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCGATTAGG-GT-AAA-GTT-GTTTATTG-TACGATCAA-ATACGCAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAATTG-ATATACAACT-TTTCG--ATC-AAGATAAAA-ATATT-TT-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AAATAATCAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTGGTGAAATTGACGGCGTA-TTTTT---------TTTA--------TTT-TTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAAATGTAAGC-A-GACTACTA-TTATAAAGA-----GATTTGATT-T--GCAG-TG-GGT--TTTGGAAC--GCGG----GGGGGGGGG---GG--GG---G-GGGT-----G-TC-GT--CC------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCC--GTTTTTTNAT-A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGT-CTA-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATC-TTGC-CCCCCGC---CCC-------------CCCCC----TTTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATANTTTAA-A-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCAC--C-TGATCAANCTACATTAATTTTCAC-AATATAGGG-CCCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA-----A-T-T-TTTCAATTA-TG-AAGT-AGATTAT-------TGTTT-AAAACTATCTAGCTA-TGTG-CAGA--TCAAACGAGTT-TTAAATTGT--AGAACTTT--AAAAGTCAGTAACCAGNAAGAGGATAG-ACTACACA
Reference ( family-1197 ) : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGCTTTG---GC-ATCGCAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-CCAA--TC----------TA------------TT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AC-CAATTAAANA--GGAAGCG-TCAG--TTTTAAATGANTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTT-GCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCGATTAGG-GT-AAA-GTT-GTTTATTG-TACGATCAA-ATACGCAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAATTG-ATATACAACT-TTTCG--ATC-AAGATAAAA-ATATT-TT-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AAATAATCAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTGGTGAAATTGACGGCGTA-TTTTT---------TTTA--------TTT-TTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAAATGTAAGC-A-GACTACTA-TTATAAAGA-----GATTTGATT-T--GCAG-TG-GGT--TTTGGAAC--GCGG----GGGGGGGGG---GG--GG---G-GGGT-----G-TC-GT--CC------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCC--GTTTTTTNAT-A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGT-CTA-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATC-TTGC-CCCCCGC---CCC-------------CCCCC----TTTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATANTTTAA-A-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCAC--C-TGATCAANCTACATTAATTTTCAC-AATATAGGG-CCCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA-----A-T-T-TTTCAATTA-TG-AAGT-AGATTAT-------TGTTT-AAAACTATCTAGCTA-TGTG-CAGA--TCAAACGAGTT-TTAAATTGT--AGAACTTT--AAAAGTCAGTAACCAGNAAGAGGATAG-ACTACACA
gi|1 : ACGATTC--AAAA-GTCGCGCCATCGAGTTACGTCCCTATTTT-----GTGACGATCAAACGAG-GATAGCTTTG---GCTATCACAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-C--A--TC----------C--------------T------AATGATTTCCGT-ATTCAGTTCTTGATTAATTTTTGT-ACGCAATTAAAAA--GGAAGCG-TCAG--TTTTAAATGAGTGTAT-GGAGA-TTT-ATTTCCGATTTCCCGTATTT-AGCAAGAAAGACCGCCTCGATCGAAGTTTTTGCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAA--TCGCAATTAGGTAT-AAAAGTT-GTTTATTG-TACGATCAA-ATATG-AAT----GTTTTCATTTT--A--ATC--GT-TTAAATAATGGGATATACAACTGTTTCG--ATC-AAGATAAAA-ATATTATTGAAAGGGAATTTATGCT----A---GAGATGCAATCGACGTCATGATCGAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AATAAAACAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGCAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTAGTGAAATTGACGGCATA-TTTTTTTGTGTTTATTTA--------TTT-TTTTTTTTGGATGCACGAT-ATT-CCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTA--TC--AT---CGGT-AT-GATGTGGCAAA-TTTGGTCT-CTTTTAGGACAACTGCAAAA--CTAT-TA-GTGTACGCATGAAAGCGTGATTT-----CA-TTTTGGGAATAATC--ATGTAAGC-A-GAC-ACTATTTATAAAGAGCCACGATTTGATT-T--GCAG-TGTGGTTGTTTGGAAC--GCGG----GGGGGGGGG---GG--AG---G-GGGT-----G-TCAGT--CC------AGA-----G-AT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TA-TTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCC--GTTTACTCA--A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGT-CTACA-TTTCATTAAGTC-AAT-T-T--AATTG----CAGA-TTG-TTTGAACATGTT-TCGTAATTTGT-ATCTTTGCGCCCCCAC---TCC-------------CTCCC----TTTGTGCTCA--TT-TAA-TC-TCAGA-TTTGTCTGC---TGCAGAA--TTTAGTTCATGTAATAAGCCATCGATGTCTCT-TTCAAAATATTTTAA-A-AATA-----AA-TGACAATGACTGT-A----TATTATAC---TA--TATTTAAAAAAAAACTTCATCTCGACGTTCATTGTACTTC-TGATCAATGTACATTAA-TTTCAC-AAT-TAGGGCCCCCAACTCTGTT----ACTGCTGGAT-CGATGGAAGCT-AATTATTTTTCAACCTG--GAA--------AGTACCACGAAGA-----A-T-C-TTTCAATTA-TG-AAGTAAGATTAT-------TGTTT-TAAACTATCTAGCTA-TGTG-CAGAG-TCAATCGAGTT-TTAAATTGT--AGAACTTTAAAAAAGCCATTAA-CAGCAAGAGGATAACACTACACA
gi|10 : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGC---------------A---GTGT----GCAATAGGCAT--GT------TCGCTT-CCAA--TC----------TACTCATTAAAATATT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AA-CAATTAAATA--GGAAGCG-TCAG--TTTTAAATGA-TATAT-GGAGA-TTTTATTTT-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGACA--GCTACG-------AC-AGA--------TTTGGAATGCTTGTTACAAATGCA--CGATTAGGGTAAAA------A---AAAATTCACAATTTGG-GT-AAA-GTT-ATTTATTG-T-CAATCAATTTACACAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAACTG-ATATACAAC--TCTCG--ATC-AAGCTAAAA-ATATT-TT-AAAGGGAATTTATACT----A---GAGATGCGATCGACGTCATGA--GAG--ATCACCAACA-TTGTAAACCCTTTTTA
gi|11 : cT-AT-TAT-T-GCAAA-TTT-GTCA-CTTT---------------A--CTAT-CA-GTGTAC-CATGAAA-CATGATAT-----CA-TTTTGGGAATGTTC-AATGTAAGCTA-GAATACTA--GATTAAGA------ATTTTATT-T--CCA--TT-GGT--CTTGGACC--GTGG----GGAGGGGAG---GG--GG---T-TGATCCTTAC-CC-AC--CC------ACACCACCC-CT-AACA-A--AACATAACTTACTG-ACCTTTA-----CCCA-CCTTTTCGATC-AAGC----------------------------AAG--TAA---GCC--GTTCTTTAAT-A-TATCGGG-CCACT--G---CC--TAGATGTA-TTCTCATTA--CTA-A--TTCACTTAATC-AATATTT--AA-T-AAGTTAAATTTG-TTTAAAAATGATGTTGTATTTTGT-AAC-ACCC-CCCCCGCACTCCCACCACCCCACCCACCCCC----CATGTG-TTA--TTGTAATTT-TCGGA-TTT-TCC-C---AGGGAGA--TTT----CA-GA-AT-A--TATT-ATGTTTCTA
gi|12 : ggagatgcgatcatgattatcatttattttaaCGCATATTGGATGTTATGTACAG-----A-ATTTATGAA-TTACTTGCG-GGTGAA-TTTATGGCG--------------------A--------TTT-TTTCTCTTA-AT-CACGAT-ATG--CG--TGTTGCCTGAAAC-------------A-A----AGGAAATCACAAACGTGGGT---A------CAGTAGTTAT-TCTTAA---TTTT-AT-GAT-T-GCAAAATTT-GTCC-CTTTTA-TACAATTGTAAAA--CTGT-CA-GTGT---CATGAAAACGTGATTT-----CAATTTTGGGAATGTTCAA-TGTATGC-TTGACTGCTA-TTATAAAGA-----AATTT-ATT-TTTGCAG-TG-G-T--GTTGGAAC--GCGG----GGGGGGGGGTAAGGTCGGACTG-AGAC-----G-AC-CC--CCATACAAAGAG----C-GT-AA-A-GTTAAT---------TGTACCGTTACCTCGCCCACTCGTTT---TC-------TAG-----TGTTCG-------AAT-CACG--TAAG--TTA--GTCCTTTTATAA-TA---GTCCCATTGCG---TA--TG-----ATTTC-CATAGTCCTA-A--TTCATTTAATC-AAT-TTTTAAA-TGactaaagaattaaacaa
gi|13 : T-AGCAAGATAGCCCGTCTCGA----ATTTTT-GCTGCGCATTGGGGT-AAACAT-----TTTCGAATGTTT-------ATGTG--GGAGTAAGGTAAGGCTTTTTA--------TCGCGATTAGG-GT-AAA-GTT-ATTTATTG-TACCATCAA-CTATGCAAT----TCTTTGATTTT--AT-ATC--AT-CTAAATGAGTG-ATAGAAAACT-TT----------------------------AAAGGGAATTCACGCCTAGCA---GAGATGC-ATCGATGC----A--AAGATA--ACCAATA-TTGTAAACC---TTTATTTGC-ATATAATCAT-AA-----------CAAATCTTGAACGTT-GTATCACGTAT-TTGGATGTTATGTACAA---AAC-ATT-ATTAA-TTACTC-CG-----ACATTGTAGGCG--------------------A--------TTT-TTTCTT---GATGCACGATAAAT-ACGCCTGTTGTCTGcgttgtt
gi|14 : TTAT-------TGTTT-TAAACTATCTAGCTA-TGTG-CAGA--TCAATCGAGTT-TT-AATTGT--AG-ACTTG--AAAAGCCAATTACCA-CAAGAGGATAA-ATTACACA
gi|15 : gattttttattatttcgcttaatactgTCAGTTCTTGATTAATTTT-GT-AC-CAATTAAAAA--GGAAGCG-TCAG--TTTTAAATGAGTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTT-GCTAC-------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAA-TCGCAATTAGG-AT-AAA-GTT-GTTTATTG-TACGATCAA-ATATGCataatgcatggacatcctctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaatgctaaaatgcgaatctttacatatacaggcgtaccctcttctttctccctcctaagttgtcatactgagtcggaacaaaaatgat
gi|16 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGCCACATGAATTTTCAC-AATATTGTG-TTCGAA-TCAGTT----ACTTCTGGAT-----GGAAGCT-AAC-ATTTCACAACCTG--GAA--------AGAACCCCGAAGA-----A------TTCAGTTA-TG-AAGT-AGATTATATAGTGCTGTTCAAAAACTATCTAGCTA------CAGA--T-AGATGA--T-TTGATTCATCAACAACTTT----CAGTCAGCAAC
gi|17 : ACGATTCCAAAAA-TTCGCGCCATC----------CCTTATTT-----GTGACG-TCAAACGAG-GATAGCTGTGTA-GA-A----AC-TGCGTTACAGCGATAGGCAT--GTTATAAATTACTCATTAA--AA----------TA------------TT------AATGATTTCCGT-TTTCAGTTCTTGATTAACTTT-GT-AC-CATTTA
gi|18 : gtatacATTTATGCTCT--A---GAGATGTGATCGACGTCATGA--GAGAT--------CA--------CCCTTTATATTTGG-AAATAATCAT-AAAAATT-C--A-CAAATCTTGAACATTTGTATCACGTAT-TTGG-----GTGTATAG-----A-ATTTATGAA-TTAGGC-CGTGGTGAAATTGACGGC-TA-CTTTT---------TTT
gi|19 : GATTTAAAAAA-GTCGCGACATAAAGTTACGTTCCTTATTT-----GTGACG-TCAAACGAG-GATAGCT
gi|2 : ttttccgaaatcataaaatattttgtaggtatcccttttaaggtctcctgacatcagtacaattgtcaatggtgtagcaaacatgacataACGATTCCAAAAA-GTCGCGCCACCGAGTTACGTCCCTTATTT-----GTGACG-TCAAATGAG-GATAGCTTTG---GC-ATCACAC-TGTGT----GCGATAGGCATACAT------TCGCTT-CCAA--TC-------------------------T------AATGATTTCCGT-ATTCAGTTTCTGATTTATTT---T-AC-CAATTAAATA--GGAAGCGTTCAGGTTTTTAAATGACTATAT-GGAGA-TTTTATTTC-GATTTCCCGTA-TT-AGCAAGA--ACCC-CCTCGATCGAAGTTTT-GCTAT-------GAC-AGA--------TTTGGAATGCTTG----AAATGCAGTCA--TAGGG-AAAA------A---A----TCGCGATTAGG-GT-AAA-GTT-G-TTATTGATACGATCAA-ATATGCAAT----TGTTTCATTTT--ATAATC--GT-TT-AATAATTG-ATA-ACAACT-TT-----ATC-AAGATAAAA-ATATC-AT-AAAGGGAATATATGCT----A---GAGATGC-ATCGACGTCATGA--GAG--ATCACCAACATTTGTAAACCCTTTTTATTTGC-AAATAAACATAAAAA-TT-C--ACCAAATCTTGAACGTTCGTATCACGCAT-TTGGATGTTATGTATAG---T---ATTTATGAA-TTACTC-CGT-GT-AAATTGACGGC-TA-TTTTT---------TTTAG-------TTTATTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AT---CGGT-AT-GAT-T-GCAAA-TTT-GTCTGCTTTTA-TACAACTGCAAAAACTTAT-TAGGTGTAC-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTC-AATGTAAGC-A-GACTACTA-TTATAAAGAGCCACGATTTGATT-T--GCAG-TG-G----TTTGGAAC---C---------GGAGGG---GG--GG---G-GGGT-----------T--CA------AGA-----C-G----------------------------TTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AACGGAAG--TAAT--CCC--GTTTTATCAA-A-TA---AT-CCATT--G---TC--TG-----A-TTC-----------------CATTAAGTC-AAT-TTT--AA-TGAAGTTAG-TTTG-TTTG-AAATG-T-TCGTAATTTGTAATC-TTGT-CCTCCCC---CCT-------------TCCCT----TTTGTGTTCA--TT-TAA-TC-TCAGA-TTT-TCT-CTCTAGC-GAA--TTTAGTTCATGT-AT-AGCCATC-ATCTCTCTATTCAA
gi|20 : acTTTGATT-T--GCAG-TG-G-T--TTTGGAAC--GGGG----TGGGGGGTG---GG--GG---GTGGGG-----G----GT--CA------AGA-----C-GT-AA-A-T--AAC---------TG-ACCTTTA-----CCCA-TAT-----------------------TGAT-A-------AAT-GAAG--TAAT--CCC--GTTCTTTCAT-A-TA---AT-CCACT--A---TCTATG-----A-TTC-CATTGT-CTA-A-TTT
gi|21 : gTTCAC-GAT-TAGGG-CA--AAGTCATTTTTCTACATCTCGATCTGATGGGAGCTTGATTGTTTTTCAACCTGACGCAGCTACTGTAGTACCCCGAAGAGCAGTA-C-T-GCT-AATTACTGTAAGT-ACATAAT-------TGTT
gi|22 : ACGATCAA-ACATACAAT----GTTTTCATTTT--AT-ATC--GT-TTCAA
gi|22 : agtaT-TT-AAAGGGAATAGTTGTT----A---GAGATGCAATCGACGT--------AGATATAACCAATA-TTGTTAACCTTTTTTATATGC-Agctttaaagggaatagttgttagagatgcaatcgacgtagatataaccaatattgttaaccttttttatatgcata
gi|23 : agtaacgatcaaacatacaatgttttcattttatatcgtttcaagcAT-AAAA-TTTC--A-CAAGTCTTGAACGTT-GTATGACGTAT-TTGGACGTTATCTATAG-----A-ATTTATTAA-TTACTC-CGTGATGCCATTGGCGACG--------------------A--------TTT-TTTTTTCTTGATGCACGAT-ATT-ta
gi|24 : ACAAT-AAT-GCA--TGTTCCCTGAAACTAGGTAATTACAAA-AGGTGA------------------T---A------TA--TATCAC-TT--AT---T--T-CT-GAT-T-GCAAA-TTT-GTCA-GTTTTA-CACAATTTTAAAA--ATAT-CT-GTGTAT-CAGGAA
gi|25 : G-TCAAACGAG-GATAGCTGTGTAGAA-ATTGCAT-TACG-----GCGATAGACAT--GA------TCGCTT-CTCA--TT----------TA------------CTCAATGTAATGATTTCCCT-CTTCAGTTCTTGATTAACTTT-GT-AC-GAATT
gi|26 : ----A------------------T---A------TA--AATCAT-TT--AT---C--T-AC-GAT-T-GGAGA-ATT-GACA-CTTTGA-TACAACTGTTAAC--CTATATATCTGTAT-CACGAAA-AGTGATTTTTTTCTA-TTTTGG--ATATCCA
gi|27 : aaacggggTTCAAACTG--GAA--------AGTGCCTCAAAGA-----A-TGT-TTTCAAC-A-CG-AAGT-AGATTAC-------TGTTT-AAAACTATCTAGCTA------CAGA--TCAATCAAGTTGTTCAGTTGT--AGTACTCT--
gi|28 : tgGATTCCAAAAA-GTCGCGTCATCGAGTTACGACCCTTATTTATTTTGTGACG-TTAAACGAG-GATAGCTTTA---GC-ATCGCAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-C
gi|29 : TA-TTATAAAGA------ATTTAATT-T--GCAG-TG-GCC--TTTGG-CC--GCGG----CGGGTGGGG---GT--GG---G-GTGT-----C-TC-GTAACT------TTA-----C-GT-AA-ACGC-AACG--------TA-ACCTTTA-----CCCA-
gi|3 : TGC-AAATAATCA--AAAA-TT-C--A-CAAATCTTGAACGTTCGTATTACGTAT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TA-TTTTT---------T--A--------TTT-TTTTGTT-GGATGCACGAT-ATT-TCG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAA-TGTAAGC-AAGACTACTA-TTATAAAGA-----G-TTTGATT-T--GCAG-CG-G-T--TTTGGAA-----GG----GGGGGGGGG---GG--GG---G-GGGA-----G-T---T--CA------AGA-----C-GT-AA-A-G--AAC---------TG-AC-TTTA-----CCCA-TATTTT---TC-AAGCGATAT-----TGAT-G-------AAC-GAAG--TAAT--CCCCCGTTTTTTAAT-A-TA---AT-CCATT--G---TC--TA-------------------TG-A-TT-CATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT--------TCCCGC---C-------------------------TTGCGCTCA--TT-T-A-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATAATTTAACA-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCA----------AAACTACATTTATTTTCAC-AATATAGGG--CCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA-----ATT-T-TTTCAATTA-TG-AAGA-AGATTAT-------TGTTT-AAAACTATTTAGCTATTGTG-CAGA--TCAAACAAG-T-TTAAATTGT--AGAACTTT--AAAAGTCCGTAACCAGAAAGAGGATAG-ACTCCACAc
gi|30 : -TTTTT---------TTTGGGGGGT--TTT-TTTTTTTTGGATGAACGTT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---ATAGGCCTA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-
gi|31 : TA-TTATC---------ATTA--------TTT-TTTTTTT--GATGCACGAT-ATT-TCG--TATTGCCAGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GA
gi|32 : ttttttttagtttTAAG-GT-AAA-GTT-ATTTATTG-TACGATAAA-A-ATGCAAT----GCTTTCATTCT--CT-ATA--AT-TTAAGT
gi|33 : ATTAC-------TGTTTGAAAACTTTCTAGCTA--G----AGA--TCAAACAAATTAATCAGTTGT--AGAGCTCT--
gi|34 : GATAGGCAT--GT------GCAATT-CCAAATTCTTCGTTAAAATA------------TT------AATTATTTCCGT-CTTCAt
gi|4 : tTGC-AAATAATCA--AAAA-TT-C--A-CAAATCTTGAACGTTCGTATTACGTAT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TA-TTTTT------------A--------TTT-TTTTTGTTGGATGCACGAT-ATT--CG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT--AT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT--ATGAA--CGTGATTT-----CA-TTTTGG-AATATTCAA-TGTAAGC-AAGACTACTA-TTATAAAGA-----G-TTTGATT-T--GCAG-CG-G-T--TTTGGAAC---CGG----GGGGGGGGG---GG--GG---G-GGGA-----G-T---T--CA------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCCC-GTTTTTTAAT-A-TA---AT-CCATT--G---TC--TA-------------------TG-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT-----T-CCCCCGC-----------------------------TTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATAATTTAA-ACAATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCA----------AAACTACATTTATTTTCAC-AATATAGGG--CCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTA-TTTTCAGCCTG--GAA--------AGTACCACGAAGA-----T-T-T-TTTCAATTA-TG-AAGA-AGATTAT-------TGTTT-AAAACTATTTAGCTATTGTG-CAGA--TCAAACAAG-T-TTAAATTGT--AGAACTTT--AAAAGTCCGTAACCAGAAAGAGGATAG-ACTACACAa
gi|5 : --TTTTGAATGCCTATCT-GGAGA-CTTTATTTA-AATTTCACGTATTTTAGCAAGAAAACCCGCCTCGA----GGTTTT-GCTCCG------GATTAGGGTAAAACTTTTGGAATGATC-------ATGCA--CGATTAGGATAAAT------ATTT----TTTGCGATTA------------------ATTG-TACGATCAA-ATACGCAATATTTGTTTTTATTTT--AC-ATCTCATCTTA--TAATTG-GTACAAAACT-TTC----AT------TAAAG----CT-TT-AAAGGTAATTTGTCCT----AACAGAGATGCGATC--------------------ATCAAAA-TTGCAAGCCATTTTTATTTGC-A--TA-TCAT-AAAA-TTTC--C-CAAATCTTGAACGTTCG-ATCACGTGT-TTGGATGATATGTAT-----------TTATGAA-TGGCTC-CGGGGTGAAATTGACGGCG--------------------A--------TTT-TTTT-----AATGCACGAT-ACT-GCG--TTTTGCCTGAAAC-------------A-ATC--A------------------CTTGA------TA--AAGGATATC--ACAAACGG-----------GTACA-TTT-GTT-------------ACT---AAA--CTAT-CA-GTGTAT-CATGAAA-CATGATTC-----CA-TTTTGGGTATGTTCAA-TATAAGCTA-GACTACTA-TTATAAAGA-----G-TTTAATT-T--GCAG-TG-G------TGTA------------GGGGGGGGG---GG--GG---G-GGGT-----GACC-TT--CCCAATCAAAA-----CAGT-AA-A-A--AA-----------G-AATTTT-------TTA-T-TTTT---TC-AACCGATAGTGTTTTGAT-ATTCGGTCAAC-GAAG--TAAG--CCC--GCTTTTTGAT-T-TA---TT-TCATC--G---CCTATG-----ATTTC-CACCGT-CTT-A-ATTCAT-------------------TGAAATTA----TG-TATG--AATG-T-TCATAATTTGT-AGCGTTGC-CCCC
gi|6 : --AC---CGGT-ATTGAT-T-GCAAA-TTTTGTCT-CTTT-A-T-TAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTAATTT-----CA-TTTTGGGAATATC--AATGTAAGCAA-GTCTACTA--TAT-AAGA-----G-TTTGATTAT--GCAGTTG-GGT--TTTGGA------GGAAACGGGGTGGGG---GG--GG---G-GGGT-----G-T---T--TC------AGA-----C-GTCAA-A-G--AAC---------TG-ACCTTTA-----CCCA-TGTTTT---TCAAAGCGATAAGTT--TGAT-G-------AAC-GAAAGTTAAT--CCT--GCTTTTTCAT-ATTA---ATCCCATT--GATTTT--TG-----A-TTT-CACTGT-CTA-ATTTTCATTAAGTCAAAT-TTT--AA-TGAAGTTAGATTTGTTTTGAAAATT-T-TCG-AA-TTGT-ATCATTGC-CCCCC-C---CCC-------------CCCCCACCTTTTTTGCTCACCTT-TAA-TCTTCAGATTTT-TCTGC---AGCAGAATTTTTAGTTC-TGT-AT-A-CCACC-ATGT-TCTATTCAAATAATTTTAA-C-AATATGTACAGTTGACGATGACTGTCAATATTA-TATATTTATATTTGTTT--TAAAAAACTTCATCTCG-CGTTCA-TGTAC--CGTGATCAATCTACA-TAATTTTCACAAACATAGGG-CCCCA----------------------CCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------ATTACCACGAAGA-----A-T-TCTTTCAATTA-TGAAAGT-AGATTAT-------TATTT-TAAAATATCAAGTTA-TGTGACAGAATTCAAACAAG----TAAATTGT--AGAACTTT--A
gi|7 : CGATTCCAAAAAAGTCGCGC-ATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAGCGATAGCTT-G---GC-ATCACACCTGT-T----GCGATAGGCATA-GT------TCGCT--CCAA--TC----------TA---------------------ATGATT-CCGTACTTAAGTTCTTGATTAATTTT-GTTAC-CAATTAAAAAACGGAAGCG-TCAG--TTTTAAATGAGTGTATTGGAGAATTTTATTTC-GATT-CCCGTATTT--GCA-GAA-ACCCGC-TCG--TGAAGTTTT-GCTACG-------AC-AGG--------ATTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCAATTAGG-ATAAAA-GTTCGTTTATTG-TACGATC-A-ATATGCAAT----G-TTTCATTTTTAGT-ATC--GT-TTAAATATTTG-ATA-ACAACC-TTTCGATATCAAAGATAAAATATCTT-AT-AAAGGGAATTTATGCT----A---GAGATGCAATCGACGTCATGATCGAGATATCACCAAC--TGGTAAACCC-TGTTATTTGCAAAATAA-CATAAAAA-TT-CCAA-CAAATCTTGAACGTTCGTATCACGCAT-TTGGAT-TTATGTATAG---T---ATTTATGAATTTACAT-CGTAGTGAAATTGACGGC-TATTTTTT---------TTTAGTTTATTTTTT-TTTTTTTTGGATGCACTA--ATTACCG--TGTTGCCTGAAAA-------------AGA----A------------------T---A------TA--AA-TAC-TC--AT---CGGTAAT-GAT-T-GCAAA--TT-GTCT-CTT
gi|8 : AT-TTGGATGTTATGTATAGATCTAGTATTTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TA-TTTTT---------T--A--------TTT-TTTTTGTTGGATGCACGAT-ATT-TCG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT--AT-T-GCAAA-TTT-GTCT-CTTT-A-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAA-TGTAAGC-AAGACTACTA-TTATAAAGA-----G-TTTGATT-T--GCAG----GGT--TTTGGAACCGGGGG----GGGGGGGGG---GG--GG---G-GGG------G-GA-GT--TCA-----AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAATCCCCC--GTTTTTTAAT-A-TA---AT-CCATT--G---TC--TA-------------------TG-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT-----T-CCCCCGC-----------------------------TTGTGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATA-TGTAATA-GATAT----
gi|9 : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGC---------------A---GTGT----GCAATAGGCAT--GT------TCGCTT-CCAA--TC----------TACTCATTAAAATATT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AA-CAATTAAATA--GGAAGCG-TCAG--TTTTAAATGACTATAT-GGAGA-TTTTATTTT-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG-ACA-GCTAC-------GAC-AGA--------TTTGGAATGCTTGTTACAAATGCA--CGATTAGGGTAAAA------A---AAAATTCACAATTTGG-GT-AAA-GTT-ATTTATTG-TACAATCAATTTACACAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAACTG-ATATACAAC--TCTCG--ATC-AAGCTAAAA-ATATT-TT-AAAGGGAATTTATACT----A---GAGATGCGATCGACGTCATGA--GAG--ATCACCAACA-TTGTAAACCCTTTTTA
blockSeqs : A ATTTT . C TGTGTAGAAATTG CC TACA AC TATAAA A AT TACTCATTAAAATATT A . T . T AC T GT G T A . T AG T T GCATTGGG T GTAAAACT GTTAC GT CTTTTTA . A . C A T C ATTT T TA A TC C . T T TCGAT CA C TA A T . TAGC ACA G C TC ATATA T A T TA A T CAA T A ATCTAGT T G T TATTTTTTTTTAGTTTATTT A T A AC CC AAAGGAAATCACAAACGTGGGTACAGT A TT AAA A TG . . A T TG T . AC A G . A TTTTC A AA TA T GCCACGA A TT T . GT ACCGGG AAAC TAA TC ACT T TGACCTTCCCAATCA CCACC A C C GTT ATAACTTAC T CCTCG C C CGA A TGTTT C TTCGGTC G GT TCC CC A A T TCG C GC ATT TA GATGTATTCTCATTACTAA A A T TA . T A A G A CGTTGC G ACTCCCACCACCCCACCCACCCCCC T CC G T T T . G TCT TT . . G . A A CA TGTAC T C ATAT . TTA T . A . CCGTGATC G A A A T G TTCT T C T AC GCTACTGT C GCAGTACT C T . ATAGTGC AA TTGTG AT TTG G CA . GA .
blockSeqs : . . . . TTTGGCATCA C . A . . . TACTCATTAAAATATT . . . . A . . . C . . . . TA T T GG . CAT GTTAC . AAAAAT . . . . . T T . C . . . . . G T TCG C A A A A . CT . G C . ATATC . . T TA . T AC C . ATCTAGT . . T TATTTTTTTTAG . T . A . TAGGTAATTACAAAAGGTGATATA . . . . T . . . . A T . . . T . . . . AA TT T AA . . . . CC CCGT . . . . . CGACCCCCATACAA G . . . CGC G . . . C . . GTT . . . . G C T . . . C . . TA ATTTCCATAGTCCTAA . . T . . . A . . . CATTGC C CCCCCCCCACCTT T . . . . . . G . . . . G . A A AC T . C . . . T . A . . A T . A C C . T C . . . C ATGT . A . . GA TTGTG . TTA C . . GA .
blockSeqs : . . . . TTTAGCATCG C . . . . . TTCGTTAAAATATT . . . . T . . . C . . . . AG T T G . . G . AAAAAT . . . . . . T . G . . . . . C T TCG C A A C T . . . A C . ATC . . A T . . A C . ATCTAGT . . T TATTTTTTA . T . T . AAATATAGGCCTA . . . . G . . . . C T . . . . . . . . AA AA T A . . . . GT ACGC . . . . . TCCTTACCCACCC . . . . A . . . . A . . . . . . . T . C . . . . . . . ATTTCCACCGTCTTAA . . T . . . A . . . CACCC G CCTTCCCTT C . . . . . . G . . . . G . . T TA T . C . . . T . . . . A T . A C C . G C . . . T ATTT . . . . T TGTGA . TT A . . C .
blockSeqs : . . . . TGTGTAGAA T . . . . . TACTCAATGT . . . . A . . . G . . . . AA T T G . . G . AAAAAT . . . . . . T . T . . . . . T C C C C A A T . . . G C . ATA . . T T . . A C . AAC . . T TATTTTTTA . T . G . AATCACTTGATA . . . . G . . . . A G . . . . . . . . AA AA T A . . . . GT ACGG . . . . . TCTCGTAACT . . . . T . . . . A . . . . . . . T . C . . . . . . . ATTTCACTGTCTAATT . . C . . . A . . . CTTGT G C C . . . . . . G . . . . G . . . C T T A . A . . . G C . . . A ATTC . . . . A TGTG . T C . .
blockSeqs : . . . . TTGGCATCA C . . . . . TATT . . . . T . . . C . . . . AG . T G . . G . AAAAA . . . . . . T . C . . . . . . . . . . . . A . . . A C . ATC . . T T . . A C . A . . T TATTTTTA . T . T . AGAATATA . . . . G . . . . A T . . . . . . . . AA TA T G . . . . T CCGC . . . . . GGAGTTCA . . . . G . . . . A . . . . . . . T . A . . . . . . . ATTCCATTGTCTAAT . . C . . . A . . . T G . T . . . . . . . . . . . . . . . . . . . . . . . . A TTT . . . . A G . T A . .
blockSeqs : . . . . . . . . . . . TA . . . . . . . . . . A . A G . . . . ATTTT . . . . . . T . T . . . . . . . . . . . . T . . . G . . ATC . . T T . . A C . A . . G GA . T . T . AAATATA . . . . G . . . . T T . . . . . . . . AA AA T G . . . . T ACC . . . . . GGGTCA . . . . G . . . . A . . . . . . . T . A . . . . . . . ATTC . . T . . . . . . . T . . T . . . . . . . . . . . . . . . A A . . . . A . . T A . .
blockSeqs : . . . . . . . . . . . T . . . . . . . . G . . . . AA . . . . . . C . T . . . . . . . . . . . AT . . . . . . C . . T . . T GA . T . T . AAATATA . . . . G . . . . T . . . . . . . . . AA AA T G . . . . T ACC . . . . . AGTTCA . . . . A . . . . G . . . . . . . G . G . . . . . . . TGAT . . C . . . . . . . . . T . . . . . .
blockSeqs : . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . A . . T GA . . . G . AAATA . . . . G . . . . T . . . . . . . . . AA A . G . . . . T A . . . . . AGTTCA . . . . G . . . . A . . . . . . . T . C . . . . . . . TGAT . . . . . .
blockSeqs : . C . T . . . GA . . . T . AAATA . . . . G . . . . T . . . . . . . . . . G . . . . . . . . . . . TGTTTC . . . . G . . . . . . . . . . . . . . A . . . . . . . TGAT
blockSeqs : . . . . . . . . . . AAATA . . . . G . . . . T . . . . . . . . . . . . . . . . . TTCA . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . .
blockSeqs : . .
blockSeqCons : TTGGCATCG***** TATCGATATT********************** T* G******* AAAAAT********* T* T* ** ATC** AT***** NATTTTTTA********************* AA* NA* T* G****** T*** NGTTCA***************** ATTCCACGTCTGAT*********** CTTT*** CCCCCC*********************** NA* T**** C* ATTT******* TGTG** ** T** **
originalCons : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGCTTTG---GC-ATCGCAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-CCAA--TC----------TA------------TT------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AC-CAATTAAANA--GGAAGCG-TCAG--TTTTAAATGANTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTT-GCTACG------GAC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCGATTAGG-GT-AAA-GTT-GTTTATTG-TACGATCAA-ATACGCAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAATTG-ATATACAACT-TTTCG--ATC-AAGATAAAA-ATATT-TT-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAGATATCACCAACA-TTGTAAACCCTTTTTATTTGC-AAATAATCAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAG---TAG-ATTTATGAA-TTACTC-CGTGGTGAAATTGACGGCGTA-TTTTT---------TTTA--------TTT-TTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAAATGTAAGC-A-GACTACTA-TTATAAAGA-----GATTTGATT-T--GCAG-TG-GGT--TTTGGAAC--GCGG----GGGGGGGGG---GG--GG---G-GGGT-----G-TC-GT--CC------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCC--GTTTTTTNAT-A-TA---AT-CCATT--G---TC--TG-----A-TTC-CATTGT-CTA-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATC-TTGC-CCCCCGC---CCC-------------CCCCC----TTTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATANTTTAA-A-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCAC--C-TGATCAANCTACATTAATTTTCAC-AATATAGGG-CCCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA-----A-T-T-TTTCAATTA-TG-AAGT-AGATTAT-------TGTTT-AAAACTATCTAGCTA-TGTG-CAGA--TCAAACGAGTT-TTAAATTGT--AGAACTTT--AAAAGTCAGTAACCAGNAAGAGGATAG-ACTACACA
finalCons : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTATTT-----GTGACG-TCAAACGAG-GATAGCTTGGCATCG-----CAC-TGTGT----GCGATAGGCAT--GT------TCGCTT-CCAA--TCTATCGATATT----------------------AATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AC-CAATTAAANA--GGAAGCG-TCAG--TTTTAAATGANTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTT-GCTACG-------AC-AGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAAAAAAAT---------TCGCGATTAGG-GT-AAA-GTT-GTTTATTG-TACGATCAA-ATACGCAAT----GTTTTCATTTT--AT-ATC--GT-TTAAATAATTG-ATATACAACT-TTTCG--ATC-AAGATAAAA-ATATTT-T-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAGATC--ACCAACA-TTGTAAACCCTTTTTATTTGC-AAATAATCAT-AAAA-TT-C--A-CAAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAGAT-----ATTTATGAA-TTACTC-CGTGGTGAAATTGACGGCNATTTTTTA---------------------TTT-TTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAA-TGTAAGCNA-GACTACTAT-TATAAAGAG------TTTGATT-T--GCAG-TG-GT---TTTGGAAC--GCGG----GGGGGGGGG---GG--GG---G-GGGNGTTCA-----------------AGA-----C-GT-AA-A-G--AAC---------TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG-----TGAT-G-------AAC-GAAG--TAAT--CCC--GTTTTTTNAT-A-TA---AT-CCATT--G---TC--TGATTCCACGTCTGAT-----------TTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATCTTT---CCCCCGCCCCCCC-----------------------TTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATANTTTAANA-AATAT----AG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCAC--C-TGATCAANCTACATTAATTTTCAC-AATATAGGGC-CCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGAATTT-------TTTCAATTA-TG-AAGT-AGATTAT-------TGTTT-AAAACTATCTAGCTATGTG--CAGA--TCAAACGAGT--TTAAATTGT--AGAACTTT--AAAAGTCAGTAACCAGNAAGAGGATAG-ACTACACA
Alignments
lowQualScore : 11111 44444444444444444 1111 777777777777777777 22222222222 111111111 22222 111111111111111 1 22222 1111 11 44444444 11111111111 222222222222 11 333333333333333333333333333333333333333333333333333333 11111 222222 11111111 22222222 1111 11111 1111111 11 55555555555555555555555555 1 888888888888888888888888888888888888888888888888888888 111 111 1 2222 1 111 11 1 5555555555 1111 22222222 1 1111111 11 222222 11 1
lowQualScore : 5 22222 4 4 22222222222222222 99 0000 4 66 1 77777 777777777777777777 5 5 5 5 1 99 6 77 6 5 5 5 5 8 6 0 55 88888888888 66 999999999 33333 66 444444444444444 4 4 4 4 4 4 4 1 9999 2 66 4 66 4 0 5 0 55 77777 66 4 77 1 55 5 5555 777 6 3 22 66 66 4 0 4 0 3 66 8 8 66 4 2 3 66666666 3 3 3 44 666 77777777777 333333333333 3 99999 3 00 44 777777777777777777777777777777777777777777777777777777 3 44 555 2 33 3 3 3 6 66 8 3 55 3 7 3 8 00000 4 9 44 000000 55 3 55 55 55 77777777 7777 666 55 666 4 2 777 88888888 666 3 3 3 0000 3 3 99999 3 2 777 4 777 00000 4 3333333 4 55 55 1 4 4 777 8 55 777 99999999999999999999999999 4 3 4 4 5 66 4 00 5 3 0 5 5 999999999999999999999999999999999999999999999999999999 1 77 5 5 5 5 5 4 000 0 77 0 5 5 4 5 5 99 7 7 111 3 0 2 1111 0 777 3 33 3 0 5555555555 1 0 1 0 6 7 99999 6 4444 2 6 6 77 00000000 1 77 888 5 5 1 5 4444444 00 333333 11 0 9999999 2 66 0 66 0 33 0
lowQualScore : . ..... . . ................. .. .... . .. . ..... .................. . . . . . .. . .. . . . . . . . . .. ........... .. ......... ..... .. ............... . . . . . . . . .... . .. . .. . . . . .. ..... .. . .. . .. . .... ... . . .. .. .. . . . . . .. . . .. . . . ........ . . . .. ... ........... ............ . ..... . .. .. ...................................................... . .. ... . .. . . . . .. . . .. . . . . ..... . . .. ...... .. . .. .. .. ........ .... ... .. ... . . ... ........ ... . . . .... . . ..... . . ... . ... ..... . ....... . .. .. . . . ... . .. ... .......................... . . . . . .. . .. . . . . . ...................................................... . .. . . . . . . ... . .. . . . . . . .. . . ... . . . .... . ... . .. . . .......... . . . . . . ..... . .... . . . .. ........ . .. ... . . . . ....... .. ...... .. . ....... . .. . .. . .. .
lowQualScore : 0 55555 4 4 77777777777777777 55 6666 4 11 4 88888 444444444444444444 0 0 0 0 0 22 7 99 6 7 7 7 0 5 2 4 44 88888888888 99 000000000 88888 99 555555555555555 4 4 4 4 4 0 0 2 4444 4 11 4 11 4 8 7 6 99 00000 44 7 11 3 55 0 6666 888 4 9 22 11 11 4 1 4 4 6 33 9 9 11 4 9 6 22222222 6 6 6 66 444 33333333333 666666666666 3 22222 1 99 66 666666666666666666666666666666666666666666666666666666 3 22 444 9 66 1 1 1 2 22 7 6 00 6 3 6 0 00000 0 7 88 999999 00 6 00 00 00 55555555 7777 444 00 444 0 4 000 66666666 444 6 6 6 5555 6 6 11111 6 2 000 0 000 00000 0 0000000 0 55 00 0 0 0 000 0 55 000 66666666666666666666666666 0 2 4 4 4 11 4 22 0 2 0 0 0 444444444444444444444444444444444444444444444444444444 4 99 7 7 7 7 7 3 000 1 99 4 7 7 3 7 0 55 5 5 777 8 0 5 2222 0 555 2 88 2 0 2222222222 0 8 4 8 7 3 55555 7 2222 5 7 7 99 77777777 6 99 777 7 7 4 7 4444444 88 111111 99 8 9999999 1 99 4 99 6 55 0
consensus : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTA-----TTTGTGACG-TCAAACGAG-GATAGC-T---T-GGC-A-TCG-CAC-TGTGT----GCGATAGGCAT-G--TTCGCTTCCAA--T--CT-ACTC--ATTAAAATATTAATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AC-CAATTAAANA--GGAAGCGT-CAG--TTTTAAATGANTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTT-GCTACG-----------A--CAGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCGATTAGG-GT-AAA-GTT-GTTTATTG-TACGATCAA-AT-ACGCAAT----GTTTTCATTTT--ATA-TC--GT-TTAAATAATTG-ATATACAACT-TTTCG--ATC-AAGATAAAA-ATATT-TT-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAG--AT--CACCAACATT-GTAAACCCTTTTTATTTGC-AAATAATCAT-AAAA-TT-C--AC-AAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAG-AT-----AT-TTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TA---TTT-----------TTT---A--------TTT-TTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAATGTAAGCNAGACTACTA-TTATAAAGAG------TTTGA--TT-TGCA--GT--GGT--TTTGGAAC----GCGG----GGGGGGGGG---GG--GG---G-GGGNGT---TC--------AA---GA-C-GT-AAA-G--AAC-TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG---TG-----AT-G-------AAC-GAAG--TAATCCC--GTTTTTTNAT-A-TA---AT-CCATT--G---TC--T-GA-T---TCCA-C-GT--CTG-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATC-TT----T---CCCCCG---C-------------------CCCCCC-------TTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATAATTTAACAA---ATATAG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCAC--C-TGATCAANCTACATTAATTTTCAC-AATATAGGG-CCCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA--ATTTTTTC-AATTA-TG-AAGT-AGATTAT-------TGTTT-AAAACTATCTAGCTA-TGTG-CAGA--TCAAACGAG-T--T--TNAATTGT--AGAACTTT--AAAAGTCAGTAACCAGNAAGAGGATAG-ACTACACA
Reference ( family-1197 ) : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTA-----TTTGTGACG-TCAAACGAG-GATAGC-T---T-GGC-A-TCG-CAC-TGTGT----GCGATAGGCAT-G--TTCGCTTCCAA--T--CT-A-TC--G-----ATATTAATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AC-CAATTAAANA--GGAAGCGT-CAG--TTTTAAATGANTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTT-GCTACG-----------A--CAGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCGATTAGG-GT-AAA-GTT-GTTTATTG-TACGATCAA-AT-ACGCAAT----GTTTTCATTTT--ATA-TC--GT-TTAAATAATTG-ATATACAACT-TTTCG--ATC-AAGATAAAA-ATATT-TT-AAAGGGAATTTATGCT----A---GAGATGCGATCGACGTCATGA--GAG--AT--CACCAACATT-GTAAACCCTTTTTATTTGC-AAATAATCAT-AAAA-TT-C--AC-AAATCTTGAACGTTCGTATCACGTAT-TTGGATGTTATGTATAG-AT-----AT-TTATGAA-TTACTC-CGTGGTGAAATTGACGGC-NA---TTT-----------TTT---A--------TTT-TTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAATGTAAGCNAGACTACTA-TTATAAAGAG------TTTGA--TT-TGCA--GT--GGT--TTTGGAAC----GCGG----GGGGGGGGG---GG--GG---G-GGGNGT---TC--------AA---GA-C-GT-AAA-G--AAC-TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG---TG-----AT-G-------AAC-GAAG--TAATCCC--GTTTTTTNAT-A-TA---AT-CCATT--G---TC--T-GA-T---TCCA-C-GT--CTG-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATC-TT----T---CCCCCG---C-------------------CCCCCC-------TTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAAATANTTTAANAA---ATATAG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCAC--C-TGATCAANCTACATTAATTTTCAC-AATATAGGG-CCCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA--ATTTTTTC-AATTA-TG-AAGT-AGATTAT-------TGTTT-AAAACTATCTAGCTA-TGTG-CAGA--TCAAACGAG-T--T--TAAATTGT--AGAACTTT--AAAAGTCAGTAACCAGNAAGAGGATAG-ACTACACA
gi|1 : ACGATTC--AAAA-GTCGCGCCATCGAGTTACGTCCCTAT-----TTTGTGACGATCAAACGAG-GATAGC-T---TTGGCTA-TCA-CAC-TGTGT----GCGATAGGCAT-G--TTCGCTTC-----------A-TC-----------CTAATGATTTCCGT-ATTCAGTTCTTGATTAATTTTTGT-ACGCAATTAAAAA--GGAAGCGT-CAG--TTTTAAATGAGTGTAT-GGAGA-TTT-ATTTCCGATTTCCCGTATTT-AGCAAGAAAGACCGCCTCGATCGAAGTTTTTGCTACGG----------A--CAGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAA--TCGCAATTAGGTAT-AAAAGTT-GTTTATTG-TACGATCAA-AT-ATG-AAT----GTTTTCATTTT--A-A-TC--GT-TTAAATAATGGGATATACAACTGTTTCG--ATC-AAGATAAAA-ATATTATTGAAAGGGAATTTATGCT----A---GAGATGCAATCGACGTCATGATCGAG--ATATCACCAACATT-GTAAACCCTTTTTATTTGC-AATAAAACAT-AAAA-TT-C--AC-AAATCTTGAACGTTCGTATCACGCAT-TTGGATGTTATGTATAGTAG-----AT-TTATGAA-TTACTC-CGTAGTGAAATTGACGGCATA---TTTTTTTGTGTTTATTT---A--------TTT-TTTTTTTTGGATGCACGAT-ATT-CCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTA--TC--AT---CGGT-AT-GATGTGGCAAA-TTTGGTCT-CTTTTAGGACAACTGCAAAA--CTAT-TA-GTGTACGCATGAAAGCGTGATTT-----CA-TTTTGGGAATAATC-ATGTAAGC-AGAC-ACTATTTATAAAGAGCCACGATTTGA--TT-TGCAGTGT--GGTTGTTTGGAAC----GCGG----GGGGGGGGG---GG--AG---G-GGGTGTCAGTC--------CA---GA-G-AT-AAA-G--AAC-TG-ACCTTTA-----CCCA-TA-TTT---TC-AAGCGATAG---TG-----AT-G-------AAC-GAAG--TAATCCC--GTTTACTCA--A-TA---AT-CCATT--G---TC--T-GA-T---TCCATT-GT--CTACA-TTTCATTAAGTC-AAT-T-T--AATTG----CAGA-TTG-TTTGAACATGTT-TCGTAATTTGT-ATC-TT----TGCGCCCCCACTCC-------------------CTCCCT-------TTGTGCTCA--TT-TAA-TC-TCAGA-TTTGTCTGC---TGCAGAA--TTTAGTTCATGTAATAAGCCATCGATGTCTCT-TTCAAAATATTTTAA-AA---ATA-AA-TGACAATGACTGT-A----TATTATAC---TA--TATTTAAAAAAAAACTTCATCTCGACGTTCATTGTACTTC-TGATCAATGTACATTAA-TTTCAC-AAT-TAGGGCCCCCAACTCTGTT----ACTGCTGGAT-CGATGGAAGCT-AATTATTTTTCAACCTG--GAA--------AGTACCACGAAGA--A-TCTTTC-AATTA-TG-AAGTAAGATTAT-------TGTTT-TAAACTATCTAGCTA-TGTG-CAGAG-TCAATCGAGTT--T--TAAATTGT--AGAACTTTAAAAAAGCCATTAA-CAGCAAGAGGATAACACTACACA
gi|10 : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTA-----TTTGTGACG-TCAAACGAG-GATAGC------------------A---GTGT----GCAATAGGCAT-G--TTCGCTTCCAA--T--CT-ACTC--ATTAAAATATTAATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AA-CAATTAAATA--GGAAGCGT-CAG--TTTTAAATGA-TATAT-GGAGA-TTTTATTTT-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGACA--GCTACG-----------A--CAGA--------TTTGGAATGCTTGTTACAAATGCA--CGATTAGGGTAAAA------A---AAAATTCACAATTTGG-GT-AAA-GTT-ATTTATTG-T-CAATCAA-TTTACACAAT----GTTTTCATTTT--ATA-TC--GT-TTAAATAACTG-ATATACAACT-CT-CG--ATC-AAGCTAAAA-ATATT-TT-AAAGGGAATTTATACT----A---GAGATGCGATCGACGTCATGA--GAG--AT--CACCAACATT-GTAAACCCTTTTTA
gi|11 : cT-AT-TAT-T-GCAAA-TTT-GTCA-CTTT---------------A--CTAT-CA-GTGTAC-CATGAAA-CATGATAT-----CA-TTTTGGGAATGTTCAATGTAAGCTAGAATACTA--GATTAAGAA------TTTTA--TT-TCCA--TT--GGT--CTTGGACC----GTGG----GGAGGGGAG---GG--GG---
gi|11 : ggagatgcgatcatgattatcatttattttaaC--------AA---AA-C-AT-AAC-T--TAC-TG-ACCTTTA-----CCCA-CCTTTTCGATC-AAGC-------------------------------AAG--TAAGCC---GTTCTTTAAT-A-TATCGGG-CCACT--G---CC--TAGA-TGTATTCT-C-ATTACTA-A-TT-CACTTAATC-AATATTT--AA-T-AAGTTAAATTTG-TTTAAAAATGATGTTGTATTTTGT-AACACC----C---CCCCCG---CACTCCCACCACCCCACCCACCCCCC-------ATGTG-TTA--TTGTAATTT-TCGGA-TTT-TCC-C---AGGGAGA--TTT----CA-GA-AT-A--TATT-ATGTTTCTAACTAAAG-AATTAAACAA---ttgatccttacccacccacaccacccctaacaaaacataacttactgacctttacccaccttttcgatcaagcaagtaagccgttctttaatatatcgggccactgcctagatgtattctcattactaattcacttaatcaatatttaataagttaaatttgtttaaaaatgatgttgtattttgtaacaccccccccgcactcccaccaccccacccaccccccatgtgttattgtaattttcggattttcccagggagatttcagaatatattatgtttctaactaaagaattaaacaa
gi|12 : ggagatgcgatcatgattatcatttattttaatattattgcaaatttgtcactttactatcagtgtaccatgaaacatgatatcattttgggaatgttcaatgtaagctagaatactagattaagaattttatttccattggtcttggaccgtggggaggggagggggttgatccttacccacccacaccacccctaaCGCATATTGGATGTTATGTACAG-A------AT-TTATGAA-TTACTTGCG-GGTGAA-TTTATGGC-GA---TTT-----------TTT---C--------TCT-T--------AAT-CACGAT-ATG--CG--TGTTGCCTGAAAC-------------A-A----AGGAAATCACAAACGTGGGT---A------CAGTAGTTAT-TCTTAA---TTTT-AT-GAT-T-GCAAAATTT-GTCC-CTTTTA-TACAATTGTAAAA--CTGT-CA-GTGT---CATGAAAACGTGATTT-----CAATTTTGGGAATGTTCAATGTATGCTTGACTGCTA-TTATAAAGAA------ATTTATTTT-TGCA--GT--GGT--GTTGGAAC----GCGG----GGGGGGGGGTAAGGTCGGACTG-AGACGA---CCCCCATACAAA---GAGC-GT-AAA-GTTAAT-TGTACCGTTACCTCGCCCACTCGTTT---TC-------TAG---TG-----TTCG-------AAT-CACG--TAAGTTA--GTCCTTTTATAA-TA---GTCCCATTGCG---TA--T-GATT---TCCA-TAGT--CCT-A-ATTCATTTAATC-AAT-TTTTAAA-TG
gi|13 : T-AGCAAGATAGCCCGTCTCGA----ATTTTT-GCTGCGCATTGGGGTAAA--CAT---------TTTCGAATGTTT-------ATGTG--GGAGTAAGGTAAGGCTTTTTA--------TCGCGATTAGG-GT-AAA-GTT-ATTTATTG-TACCATCAA-CT-ATGCAAT----TCTTTGATTTT--ATA-TC--AT-CTAAATGAGTG-ATAGAAAACT-TT----------------------------AAAGGGAATTCACGCCTAGCA---GAGATGC-ATCGATGC----A--AAG--AT--AACCAATATT-GTAAACC---TTTATTTGC-ATATAATCAT-AA----------C-AAATCTTGAACGTT-GTATCACGTAT-TTGGATGTTATGTACAA-A------ACATTATTAA-TTACTC-C-----GACATTGTAGGC-GA---TTT-----------TTT---C--------TT-----------GATGCACGATAAAT-ACGCCTGTTGTCTGcgttgtt
gi|14 : TTAT-------TGTTT-TAAACTATCTAGCTA-TGTG-CAGA--TCAATCGAG-T--T--TTAATTGT--AG-ACTTG--AAAAGCCAATTACCA-CAAGAGGATAA-ATTACACA
gi|15 : gattttttattatttcgcttaatactgTCAGTTCTTGATTAATTTT-GT-AC-CAATTAAAAA--GGAAGCGT-CAG--TTTTAAATGAGTGTAT-GGAGA-TTTTATTTC-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAGTTTT-GCTACG-----------A--CAGA--------TTTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAA-TCGCAATTAGG-AT-AAA-GTT-GTTTATTG-TACGATCAA-AT-ATGCataatgcatggacatcctctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaatgctaaaatgcgaatctttacatatacaggcgtaccctcttctttctccctcctaagttgtcatactgagtcggaacaaaaatgat
gi|16 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGCCACATGAATTTTCAC-AATATTGTG-TTCGAA-TCAGTT----ACTTCTGGAT-----GGAAGCT-AAC-ATTTCACAACCTG--GAA--------AGAACCCCGAAGA--A----TTC-AGTTA-TG-AAGT-AGATTATATAGTGCTGTTCAAAAACTATCTAGCTA------CAGA--T-AGATGA--T--T--TGATTCATCAACAACTTT----CAGTCAGCAAC
gi|17 : ACGATTCCAAAAA-TTCGCGCCATC----------CCTTA-----TTTGTGACG-TCAAACGAG-GATAGC-T------GT-G-TAGAAAC-TGCGTTACAGCGATAGGCAT-G--TTA----TAAA--TTACTCA-TTAAA-----ATATTAATGATTTCCGT-TTTCAGTTCTTGATTAACTTT-GT-AC-CATTTA
gi|18 : gtatacATTTATGCTCT--A---GAGATGTGATCGACGTCATGA--GAG--AT--CACC--------------CTTTATATTTGG-AAATAATCAT-AAAAATT-C--AC-AAATCTTGAACATTTGTATCACGTAT-TTGG-----GTGTATAG-A------AT-TTATGAA-TTAGGC-CGTGGTGAAATTGACGGC-TA---CTT-----------TTT---
gi|19 : GATTTAAAAAA-GTCGCGACATAAAGTTACGTTCCTTA-----TTTGTGACG-TCAAACGAG-GATAGC-T---tt
gi|2 : ttttccgaaatcataaaatattttgtaggtatcccttttaaggtctcctgacatcagtacaattgtcaatggtgtagcaaacatgacataACGATTCCAAAAA-GTCGCGCCACCGAGTTACGTCCCTTA-----TTTGTGACG-TCAAATGAG-GATAGC-T---TTGGC-A-TCA-CAC-TGTGT----GCGATAGGCAT-ACATTCGCTTCCAA--T--CT-A-----------------ATGATTTCCGT-ATTCAGTTTCTGATTTATTTT----AC-CAATTAAATA--GGAAGCGTTCAGGTTTTTAAATGACTATAT-GGAGA-TTTTATTTC-GATTTCCCGTATT--AGCAAGAA--CCC-CCTCGATCGAAGTTTT-GCTATG-----------A--CAGA--------TTTGGAATGCTTG----AAATGCAGTCA--TAGGG----A------A---AAAAT-CGCGATTAGG-GT-AAA-GTT-GTT-ATTGATACGATCAA-AT-ATGCAAT----TGTTTCATTTT--ATAATC--GT-TTAA-TAATTG-ATA-ACAACT-TT-----ATC-AAGATAAAA-ATATC-AT-AAAGGGAATATATGCT----A---GAGATGC-ATCGACGTCATGA--GAG--AT--CACCAACATTTGTAAACCCTTTTTATTTGC-AAATAAACAT-AAAAATT-C--ACCAAATCTTGAACGTTCGTATCACGCAT-TTGGATGTTATGTATAG--T-----AT-TTATGAA-TTACTC-CGTG-T-AAATTGACGGC-TA---TTT-----------TTTTTAG--------TTTATTTTTTTTGGATGCACGAT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AT---CGGT-AT-GAT-T-GCAAA-TTT-GTCTGCTTTTA-TACAACTGCAAAAACTTAT-TAGGTGTAC-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAATGTAAGC-AGACTACTA-TTATAAAGAGCCACGATTTGA--TT-TGCA--GT--GG---TTTGGAAC-----CGG----AGGGGGGGG---GG-------------GT---TC--------AA---GA-C-G-------------------TTTA-----CCCA-TATTTT---TC-AAGCGATAG---TG-----AT-G-------AACGGAAG--TAATCCC--GTTTTATCAA-A-TA---AT-CCATT--G---TC--T-GA-T---TC------------------CATTAAGTC-AAT-TTT--AA-TGAAGTTAG-TTTG-TTTG-AAATG-T-TCGTAATTTGTAATC-TTGTCCT---CCCCCC---T-------------------TCCCTT-------TTGTGTTCA--TT-TAA-TC-TCAGA-TTT-TCT-CTCTAGC-GAA--TTTAGTTCATGT-AT-AGCCATC-ATCTCTCTATTCAA
gi|20 : acG------TTTGA--TT-TGCA--GT--GGT--TTTGGAAC----GGGG----TGGGGGGTG---GG--GG---GTGGGGGG---TC--------AA---GA-C-GT-AAA-T--AAC-TG-ACCTTTA-----CCCA-TAT---------------------TG-----AT-A-------AAT-GAAG--TAATCCC--GTTCTTTCAT-A-TA---AT-CCACT--A---TCTAT-GA-T---TCCATT-GT--CTA-A-TTT
gi|21 : TTCAC-GAT-TAGGG-CA--AAGTCATTTTTCTACATCTCGATCTGATGGGAGCTTGATTGTTTTTCAACCTGACGCAGCTACTGTAGTACCCCGAAGAGCAGTACTGCTAATTACTGTAAGT-ACATAAT-------TGTT
gi|22 : ACGATCAA-AC-ATACAAT----GTTTTCATTTT--ATA-TC--GT-TTCAA
gi|22 : agtaT-TT-AAAGGGAATAGTTGTT----A---GAGATGCAATCGACGT----A--GAT--AT--AACCAATATT-GTTAACCTTTTTTATATGC-Agctttaaagggaatagttgttagagatgcaatcgacgtagatataaccaatattgttaaccttttttatatgcata
gi|23 : agtaacgatcaaacatacaatgttttcattttatatcgtttcaagcAT-AAAA-TTTC--AC-AAGTCTTGAACGTT-GTATGACGTAT-TTGGACGTTATCTATAG-A------AT-TTATTAA-TTACTC-CGTGATGCCATTGGCGAC-GA---TTT-----------TTT------------TTT-CTT------GATGCACGAT-ATT-ta
gi|24 : ACAAT-AAT-GCA--TGTTCCCTGAAACTAGGTAATTACAAA-AGGTGA------------------T---A------TA--TATCAC-TT--AT---T--T-CT-GAT-T-GCAAA-TTT-GTCA-GTTTTA-CACAATTTTAAAA--ATAT-CT-GTGTAT-CAGGAA
gi|25 : G-TCAAACGAG-GATAGC-TGTGT-AGA-AATTG-CAT-TACG-----GCGATAGACAT-G--ATCGCTTCTCA--T--TT-ACTC--A-----ATGT-AATGATTTCCCT-CTTCAGTTCTTGATTAACTTT-GT-AC-GAATT
gi|26 : ----A------------------T---A------TA--AATCAT-TT--AT---C--T-AC-GAT-T-GGAGA-ATT-GACA-CTTTGA-TACAACTGTTAAC--CTATATATCTGTAT-CACGAAA-AGTGATTTTTTTCTA-TTTTGG--ATATCCA
gi|27 : aaacggggTTCAAACTG--GAA--------AGTGCCTCAAAGA--ATGTTTTC-AAC-A-CG-AAGT-AGATTAC-------TGTTT-AAAACTATCTAGCTA------CAGA--TCAATCAAG-TTGT--TCAGTTGT--AGTACTCT--
gi|28 : tgGATTCCAAAAA-GTCGCGTCATCGAGTTACGACCCTTATTTATTTTGTGACG-TTAAACGAG-GATAGCTT---T-AGC-A-TCG-CAC-TGTGT----GCGATAGGCAT-G--TTCGCTTC
gi|29 : TA-TTATAAAGAA------TTTAA--TT-TGCA--GT--GGC--CTTTGGCC----GCGG----CGGGTGGGG---GT--GG---G-GTGT-C---TCGT------AACTTTA-C-GT-AAACGC-AACGTA-ACCTTTA-----CCCA-
gi|3 : TGC-AAATAATCA--AAAA-TT-C--AC-AAATCTTGAACGTTCGTATTACGTAT-TTGGATGTTATGTATAG-ATCTAGTAT-TTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TA---TTT-----------TTT---A--------TTT-TTTTGTT-GGATGCACGAT-ATT-TCG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAATGTAAGCAAGACTACTA-TTATAAAGAG------TTTGA--TT-TGCA--GC--GGT--TTTGGAA-------GG----GGGGGGGGG---GG--GG---G-GGGAGT---TC--------AA---GA-C-GT-AAA-G--AAC-TG-AC-TTTA-----CCCA-TATTTT---TC-AAGCGATAT---TG-----AT-G-------AAC-GAAG--TAATCCCCCGTTTTTTAAT-A-TA---AT-CCATT--G---TC--T-A------------------TG-A-TT-CATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-ATT-------------CCCG---C-------------------C------------TTGCGCTCA--TT-TA--TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTCAAA-TAATTTAACAA---ATATAG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCA----------AAACTACATTTATTTTCAC-AATATAGGG-CCC-AACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------AGTACCACGAAGA--ATTTTTTC-AATTA-TG-AAGA-AGATTAT-------TGTTT-AAAACTATTTAGCTATTGTG-CAGA--TCAAACAAG-T--T--TAAATTGT--AGAACTTT--AAAAGTCCGTAACCAGAAAGAGGATAG-ACTCCACAc
gi|30 : --------TTT-TTTTTTTTGGATGAACGTT-ATT-TCG--TGTTGCCTGAAAC-------------A-A----A------------------T---ATAGGCCTA--AATTAC-TC--AC---CGGT-AT-GAT-T-GCAAA-TTT-
gi|31 : ttttttttggggggtTT---A--------TTT-TTTTTTT--GATGCACGAT-ATT-TCG--TATTGCCAGAAAC-------------A-A----A------------------T---A------TA--AATTAC-TC--AC---CGGT-AT-GA
gi|32 : ttttttttagttttattatcaTAAG-GT-AAA-GTT-ATTTATTG-TACGATAAA-A--ATGCAAT----GCTTTCATTCT--CTA-TA--AT-TTAAGT
gi|33 : ATTAC-------TGTTTGAAAACTTTCTAGCTA--G----AGA--TCAAACAAA-T--TAATCAGTTGT--AGAGCTCT--
gi|34 : GATAGGCAT-G--TGCAATTCCAAATT--CT---TC--GTTAAAATATTAATTATTTCCGT-CTTCAt
gi|4 : tTGC-AAATAATCA--AAAA-TT-C--AC-AAATCTTGAACGTTCGTATTACGTAT-TTGGATGTTATGTATAG-ATCTAGTAT-TTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TA---TTT-----------TT----A--------TTT-TTTTTGTTGGATGCACGAT-ATT--CG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT--AT-T-GCAAA-TTT-GTCT-CTTTTA-TACAACTGCAAAA--CTAT-TA-GTGTAT--ATGAA--CGTGATTT-----CA-TTTTGG-AATATTCAATGTAAGCAAGACTACTA-TTATAAAGAG------TTTGA--TT-TGCA--GC--GGT--TTTGGAAC-----CGG----GGGGGGGGG---GG--GG---G-GGGAGT---TC--------AA---GA-C-GT-AAA-G--AAC-TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG---TG-----AT-G-------AAC-GAAG--TAATCCCC-GTTTTTTAAT-A-TA---AT-CCATT--G---TC--T-A------------------TG-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT--------T---CCCCCG---C--------------------------------TTGCGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATAATTTAAACA---ATATAG-TGACGATGACTGTCA----TA-TATAT---TATTTGTTT--TAAAAAACTTCATCTCGACGTTCA-TGCA----------AAACTACATTTATTTTCAC-AATATAGGG--CCCAACTCAGTT----ACTGCTGGATCCGATGGAAGCT-AATTA-TTTTCAGCCTG--GAA--------AGTACCACGAAG---ATTTTTTC-AATTA-TG-AAGA-AGATTAT-------TGTTT-AAAACTATTTAGCTATTGTG-CAGA--TCAAACAAG-T--T--TAAATTGT--AGAACTTT--AAAAGTCCGTAACCAGAAAGAGGATAG-ACTACACAa
gi|5 : --TTTTGAATGCCTATCT-GGAGA-CTTTATTTA-AATTTCACGTATTTTAGCAAGAAAACCCGCCTCGA----GGTTTT-GCTCCG-----------GATTAGGGTAAAACTTTTGGAATGATC-------ATGCA--CGATTAGGATAAAT------ATTT----TTTGCGATTA------------------ATTG-TACGATCAA-AT-ACGCAATATTTGTTTTTATTTT--ACA-TCTCATCTTA--TAATTG-GTACAAAACT-TTC----AT------TAAAG----CT-TT-AAAGGTAATTTGTCCT----AACAGAGATGCGATC----------------------ATCAAAATT-GCAAGCCATTTTTATTTGC-A--TA-TCAT-AAAA-TTTC--CC-AAATCTTGAACGTTCG-ATCACGTGT-TTGGATGATATGTAT-------------TTATGAA-TGGCTC-CGGGGTGAAATTGACGGC-GA---TTT-----------TTT-----------------------TA-ATGCACGAT-ACT-GCG--TTTTGCCTGAAAC-------------A-ATC--A------------------CTTGA------TA--AAGGATATC--ACAAACGG-----------GTACA-TTT-GTT-------------ACT---AAA--CTAT-CA-GTGTAT-CATGAAA-CATGATTC-----CA-TTTTGGGTATGTTCAATATAAGCTAGACTACTA-TTATAAAGAG------TTTAA--TT-TGCA--GT--GGT--GTAGG----------G----GGGGGGGGG---GG--GG---G-TGACCT---TCCCAATC--AA---AA-CAGT-AAA-A--AA---G-AATTTT-------TTA-T-TTTT---TC-AACCGATAG---TGTTTTGAT-ATTCGGTCAAC-GAAG--TAAGCCC--GCTTTTTGAT-T-TA---TT-TCATC--G---CCTAT-GATT---TCCACC-GT--CTT-A-ATTCAT-------------------TGAAATTA----TG-TATG--AATG-T-TCATAATTTGT-AGC-GT----T---GCCCC
gi|6 : --AC---CGGT-ATTGAT-T-GCAAA-TTTTGTCT-CTTT-A-T-TAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTAATTT-----CA-TTTTGGGAATA-TCAATGTAAGCAAGTCTACTA--TAT-AAGAG------TTTGA--TTATGCA--GTTGGGT--TTTGGA--------GGAAACGGGGTGGGG---GG--GG---G-GGGTGT---TT--------CA---GA-C-GTCAAA-G--AAC-TG-ACCTTTA-----CCCA-TGTTTT---TCAAAGCGATAAGTTTG-----AT-G-------AAC-GAAAGTTAATCCT--GCTTTTTCAT-ATTA---ATCCCATT--GATTTT--T-GA-T---TTCA-CTGT--CTA-ATTTTCATTAAGTCAAAT-TTT--AA-TGAAGTTAGATTTGTTTTGAAAATT-T-TCG-AA-TTGT-ATCATT----G---CCCCCC---C-------------------CCCCCCCCACCTTTTTTGCTCACCTT-TAA-TCTTCAGATTTT-TCTGC---AGCAGAATTTTTAGTTC-TGT-AT-A-CCACC-ATGT-TCTATTCAAATAATTTTAACAATATGTACAGTTGACGATGACTGTCAATATTA-TATATTTATATTTGTTT--TAAAAAACTTCATCTCG-CGTTCA-TGTAC--CGTGATCAATCTACA-TAATTTTCACAAACATAGGG-CCCCA----------------------CCGATGGAAGCT-AATTATTTTTCAGCCTG--GAA--------ATTACCACGAAGA--ATTCTTTC-AATTA-TGAAAGT-AGATTAT-------TATTT-TAAAATATCAAGTTA-TGTGACAGAATTCAAACAAG-------TAAATTGT--AGAACTTT--Ac
gi|7 : CGATTCCAAAAAAGTCGCGC-ATCGAGTTACGTCCCTTA-----TTTGTGACG-TCAAACGAGCGATAGC-T---T-GGC-A-TCA-CACCTGT-T----GCGATAGGCATAG--TTCGCT-CCAA--T--CT-A-----------------ATGATT-CCGTACTTAAGTTCTTGATTAATTTT-GTTAC-CAATTAAAAAACGGAAGCGT-CAG--TTTTAAATGAGTGTATTGGAGAATTTTATTTC-GATT-CCCGTATTT--GCA-GAA-ACCCGC-TCG--TGAAGTTTT-GCTACG-----------A--CAGG--------ATTGGAATGCTTG----AAATGCA--CGATTAGGGTAAAA------A---AAAATTCGCAATTAGG-ATAAAA-GTTCGTTTATTG-TACGATC-A-AT-ATGCAAT----G-TTTCATTTTTAGTA-TC--GT-TTAAATATTTG-ATA-ACAACC-TTTCGATATCAAAGATAAAATATCTT-AT-AAAGGGAATTTATGCT----A---GAGATGCAATCGACGTCATGATCGAGATAT--CACCAAC-TG-GTAAACCC-TGTTATTTGCAAAATAA-CATAAAAA-TT-CCAAC-AAATCTTGAACGTTCGTATCACGCAT-TTGGAT-TTATGTATAG--T-----AT-TTATGAATTTACAT-CGTAGTGAAATTGACGGC-TATTTTTT-----------TTT---AGTTTATTTTTT-TTTTTTTTGGATGCACTA--ATTACCG--TGTTGCCTGAAAA-------------AGA----A------------------T---A------TA--AA-TAC-TC--AT---CGGTAAT-GAT-T-GCAAA--TT-GTCT-CTT
gi|8 : AT-TTGGATGTTATGTATAG-ATCTAGTAT-TTATGAA-TTACTC-CGTGGTGAAATTGACGGC-TA---TTT-----------TTT---A--------TTT-TTTTTGTTGGATGCACGAT-ATT-TCG--TTTTGCCTGAAAC-------------A-A----A------------------T---A----------AATTAC-TC--AC---CGGT-AT--AT-T-GCAAA-TTT-GTCT-CTTT-A-TACAACTGCAAAA--CTAT-TA-GTGTAT-CATGAAA-CGTGATTT-----CA-TTTTGGGAATATTCAATGTAAGCAAGACTACTA-TTATAAAGAG------TTTGA--TT-TGCA--G---GGT--TTTGGAACCGGGGGGG----GGGGGGGGG---GG--GG---G-GGGAGT---TC--------AA---GA-C-GT-AAA-G--AAC-TG-ACCTTTA-----CCCA-TATTTT---TC-AAGCGATAG---TG-----AT-G-------AAC-GAAG--TAATCCCCCGTTTTTTAAT-A-TA---AT-CCATT--G---TC--T-A------------------TG-A-TTTCATTAAGTC-AAT-TCT--AA-TGAAGTTAGATTTG-TTTGAAAATG-T-TCGTAATTTGT-AT--------T---CCCCCG---C--------------------------------TTGTGCTCA--TT-TAA-TC-TCAGA-TTT-TCTGC---AGCAGAA--TTTAGTCCATGT-AT-AGCCATC-ATGTCTCTATTC-AAATA-TGTAATAG---ATAT
gi|9 : ACGATTCCAAAAA-GTCGCGCCATCGAGTTACGTCCCTTA-----TTTGTGACG-TCAAACGAG-GATAGC------------------A---GTGT----GCAATAGGCAT-G--TTCGCTTCCAA--T--CT-ACTC--ATTAAAATATTAATGATTTCCGT-CTTCAGTTCTTGATTAACTTT-GT-AA-CAATTAAATA--GGAAGCGT-CAG--TTTTAAATGACTATAT-GGAGA-TTTTATTTT-GATTTCCCGTATTT-AGCAAGAAGACCCGCCTCGATCGAAG-ACA-GCTACG-----------A--CAGA--------TTTGGAATGCTTGTTACAAATGCA--CGATTAGGGTAAAA------A---AAAATTCACAATTTGG-GT-AAA-GTT-ATTTATTG-TACAATCAATTT-ACACAAT----GTTTTCATTTT--ATA-TC--GT-TTAAATAACTG-ATATACAAC--TCTCG--ATC-AAGCTAAAA-ATATT-TT-AAAGGGAATTTATACT----A---GAGATGCGATCGACGTCATGA--GAG--AT--CACCAACATT-GTAAACCCTTTTTA