lowQualScore : 111 333333333 111111111 2222222222222
lowQualScore : 66 4 222 888888888 3 3 333333333 5555 6666 2 2 6 5 2 2 2 5 5 2 2 2 8888888888888 2 2 2 66 77777 2 0 3 3 77 3
lowQualScore : .. . ... ......... . . ......... .... .... . . . . . . . . . . . . ............. . . . .. ..... . . . . .. .
lowQualScore : 11 0 777 333333333 6 1 999999999 4444 1111 9 9 9 7 9 9 9 7 6 9 9 9 9999999999999 9 9 9 88 11111 9 7 1 1 33 2
consensus : GAGAA--CAAATA-AA---TAT-----G--AA-CTTTC-AA----A-TA-CAT-GT-AT----TTT-T-TATTT-TATTTAT-G-C-A-CGAT-A-AAGTTC-TT-------------A-GTC-AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA
Reference ( gi|9 ) : GAGAA--CAAATA-AA---TAT-----G--GA-CTTTC-AA----A-TG-CAT-GT-AT----TTT-T-TATTT-TATTTAT-G-C-A-CAAT-A-AAGTTC-TT-------------A-GTC-AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA
gi|8 : GAGAA--CAAATA-AA---TAT-----G--AA-CTTTC-AA----A-TG-CAT-GT-AT----TTT-T-TATTT-TATTTAT-G-C-A-CAAT-A-AAGTTC-TT-------------A-GTC-AA-T--ATTA------C-TGAGGAAT-A-AG-GAAAAAAAAAACGTA
gi|10 : GAGAA--TAAATA-AA---TATAT---G--AA-ATTT--AA----A-TA-CAT-GT-AT----TTT-T-TATTT-TATTTAT-G-C-A-CGGT-A-AATTTC-TT-------------A-GTC-AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAA
gi|7 : GAGAA--CAAATA-AA---TAT-----ATCAA-CTT-C-AA----A-TA-CAT-GT-AT----TTTTT-TATTT-TATTTAT-G-C-A-CGAT-A-AAGTTC-TT-------------A-GTC-AA-T--ATTAC-----C-TGA-GAAT-T-A--GAAAAAAAAgta
gi|2 : GAGAATACAAATATAA---TATATT--G--AA-CTTTC-AA----AATA-CAT-G--AT----TTT-TATATTTGTAGG-AT-A---A-CGAT-A-A-GTTC-TT-------------A-GTC-AA-TG-ATTACGTTATC-TGAG-AAT-A-A--GAAGAAAAAAAcccgt
gi|11 : AGAA--AAAATA-AA---TATAT---G--CA-CTTTC-AA----A-TA-CAT-TT-AT----TTT-T-TATTT-TATTTAT-G-C-A-CGAT-A-AAGTTC-TT-------------A-ATC-AA-T--ATTAC-----C-T-AGGAAT-A-A--AAAAAAAaaaccccgtata
gi|3 : AGAA--CAAATA-AA---TATATAATG--GATCTTTC-AA------TA-CAT-GT-AT----TTT-T-TATTTCTAGTTAT-GCC-A-CCGT-ATAAATTC-TTC------------A-GTC-AT-T--ATTAC-----C-T-AGGAAT-T-AGGGGGGAAAAAAACGTAgtat
gi|14 : AGAA--ATAATA-AA---TATC----G--AA-CTTTC-AA------TG-AAT----AT----TCT-T-T-------------G-C-A-CGAT-A-AGTTTC-TT-------------A-TTC-AA-T--ATTAC-----CATGAGGAAT-A-A--AAAAAAAAt
gi|12 : agaAGAA--CAA-TA-AAATATAT-----T--AA-CTTTC-AAG---A-TAACAT-G--AT----TTT-T-T-TTT-TATTTCT-G-C-AACGAT-A---GTTC-GT-------------A-G-C-AA-T--A--------------GGAAT-A-A--GAAAGAAAAAACGTA
gi|5 : AA--CAAATA-AAATATAT-----G--AA-CTTTCCAA----A-TA-CATTGT-AT----TTT-T-TATTT-TATTTA--G-CAA-CGAT---AAGTTCTTT-------------A-GTCAAA-T--ATTAC-----C-TGA-GAAT-AGA--GGAAAACAAAA-GTAta
gi|6 : agaAAATA-AA---TAT-----AT-GA-CTTTC-AAGCCCA-TA-CAT-GT-AT----TTT-T-TATGT-TTTTTATTG-C-ATCGAT-A-AAGTTC-TT-------------G-GTC-A--T--ATTAC-----C-TGATGAATAA-A--GAAAGAAAAAAT
gi|4 : ggagA---TAT-----A--AA-CTTTC-A------------------T----TTT-T-T-TTC-CATTTA--G-C-A-CGAT-A-AAGTTC-TTTGTTTAGG-----A-ATC-AAGTCAATCAC-----G-TGACAAAT-A-A--GAAAAGAAA
gi|16 : gaacaaaataagataatatctatattC-AA----A-TA-CAT-GTTAT----TTT-T-TTATT-TATTTAT-G-A-A-CGAT-C-ATTTTC-TT-------------A-GTC-AA-T--ATTA------C-TGAGGAAT-A-A--GAAAAAAA
gi|1 : C-AA----A-TT-GAT-AT-ATAAACTTT-T-T-TTT-TAATTAT-G-C-A-CGAT-A-AAGTTC-TTTGTTTTGAAAGCAA-GTC-A-----ATTAC-----C-TGAG
gi|15 : tgcacgtgtatctcggcagtaatagagaaAT-GT-AT----TTT-T-TATTT-TATTTAT-G-C-A-CGATTA-AAGTTT-TT-------------TTGTC-CA-T--ATTAC-----C-TGAGGAAT-A-A--GAAACAAAAAcagaaggataatttgtatcacctgacaaataaaaagagaaa
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|13 ): AACAAATATAATAAGTTCTATAAACTTTCAATTCTTTTAATTATGCACGATAAAATTTTTCGTTTTGAAATTAATCGCCTCACAAATAAGAAGAGAA
Alignments
lowQualScore : 1111 222222222 111111 2222222222222
lowQualScore : 44 9999 6666 777777777 2 333333 2 2 7777 2 2 4 5 2 2 2 5 2 2 2 2 5555555555555 7777 2 99 66666 2 0 2 2 66 1
lowQualScore : .. .... .... ......... . ...... . . .... . . . . . . . . . . . . ............. .... . .. ..... . . . . .. .
lowQualScore : 66 6666 1111 111111111 7 333333 7 5 7777 5 5 8 0 5 5 5 0 5 5 5 5 3333333333333 8888 5 44 22222 5 9 7 7 33 0
consensus : GAGAA--CAAATA----AA----TAT------G--AACTTTC-AA----A-TA-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA
Reference ( family-1120 ) : GAGAA--CAAATA----AA----TAT------G--AACTTTC-AA----A-TA-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA
gi|1 : GAGAA--CAAAT-------------T------G--A---------------TA-TAT-A--A-ACTTT-T-T-TTT-TAATTAT-G-C-A-CGA-TA-AAG-TTC-TTTGTTTTGAAAGCAAGTC----A-----ATTAC-----C-TGAG
gi|10 : tgcacgtgtatctcggcagtaataGAGAA--TAAATA----AA----TATAT----G--AAATTT--AA----A-TA-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGG-TA-AAT-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAcagaaggataatttgtatcacctgacaaataaaaagagaaa
gi|11 : AGAA--AAAATA----AA----TATAT----G--CACTTTC-AA----A-TA-CAT-T--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AATC----AA-T--ATTAC-----C-T-AGGAAT-A-A--AAAAAAAgta
gi|12 : AGAA--CAA-TA----AAATA-TAT------T--AACTTTC-AAG---A-TAACAT-G----ATTTT-T-T-TTT-TATTTCT-G-C-AACGA-TA---G-TTC-GT-------------AG-C----AA-T--A--------------GGAAT-A-A--GAAAGAAAAAACGTAgtat
gi|13 : AA--CAAATATAATAAGTTCTAT------A--AACTTTC-AA------------------------T-TCTTT-TAATTAT-G-C-A-CGA-TA-AAA-TTT-TT-------------CGTTTTGAAA-TTAATCGC-----C-TCACAAAT-A-A--GAAGAGAAta
gi|14 : AGAA--ATAATA----AA----TATC-----G--AACTTTC-A-----------AT-GAAT-ATTCT-T-------------T-G-C-A-CGA-TA-AGT-TTC-TT-------------ATTC----AA-T--ATTAC-----CATGAGGAAT-A-A--AAAAAAAA
gi|15 : agaAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGATTA-AAGTTTT-TT-------------TGTC----CA-T--ATTAC-----C-TGAGGAAT-A-A--GAAACAAAAA
gi|16 : C-AA----A-TA-CAT-G--TTATTTT-T-TTATT-TATTTAT-G-A-A-CGA-TC-ATT-TTC-TT-------------AGTC----AA-T--ATTA------C-TGAGGAAT-A-A--GAAAAAAAcagtat
gi|2 : GAGAATACAAATAT---AA----TATATT---G--AACTTTC-AA----AATA-CAT-G----ATTTT-TATATTTGTAGG-AT-A---A-CGA-TA-A-G-TTC-TT-------------AGTC----AA-TG-ATTACGTTATC-TGAG-AAT-A-A--GAAGAAAAAAA
gi|3 : AGAA--CAAATA----AA----TATATAATGG--ATCTTTC-AA------TA-CAT-G--T-ATTTT-T-TATTTCTAGTTAT-GCC-A-CCG-TATAAA-TTC-TTC------------AGTC----AT-T--ATTAC-----C-T-AGGAAT-T-AGGGGGGAAAAAAACGTAaaaccccgtata
gi|4 : A----TAT------A--AACTTTC-A--------------------TTTT-T-T-TTC-CATTTA--G-C-A-CGA-TA-AAG-TTC-TTTGTTTAGG-----AATC----AAGTCAATCAC-----G-TGACAAAT-A-A--GAAAAGAAAt
gi|5 : gaacaaaataagataatatctatattAA--CAAATA----AAATA-TAT------G--AACTTTCCAA----A-TA-CATTG--T-ATTTT-T-TATTT-TATTTA--G-CAA-CGA-T--AAG-TTCTTT-------------AGTCA---AA-T--ATTAC-----C-TGA-GAAT-AGA--GGAAAACAAAA-GTA
gi|6 : agaAAATA----AA----TAT------AT-GACTTTC-AAGCCCA-TA-CAT-G--T-ATTTT-T-TATGT-TTTTTATTG-C-ATCGA-TA-AAG-TTC-TT-------------GGTC----A--T--ATTAC-----C-TGATGAATAA-A--GAAAGAAAAAAT
gi|7 : ggagGAGAA--CAAATA----AA----TAT------ATCAACTT-C-AA----A-TA-CAT-G--T-ATTTTTT-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGA-GAAT-T-A--GAAAAAAAA
gi|8 : GAGAA--CAAATA----AA----TAT------G--AACTTTC-AA----A-TG-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CAA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTA------C-TGAGGAAT-A-AG-GAAAAAAAAAACGTAcccgt
gi|9 : GAGAA--CAAATA----AA----TAT------G--GACTTTC-AA----A-TG-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CAA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA
Alignments
lowQualScore : 1111 222222222 111111 2222222222222
lowQualScore : 44 9999 6666 777777777 2 333333 2 2 7777 2 2 4 5 2 2 2 5 2 2 2 2 5555555555555 7777 2 99 66666 2 0 2 2 66 1
lowQualScore : .. .... .... ......... . ...... . . .... . . . . . . . . . . . . ............. .... . .. ..... . . . . .. .
lowQualScore : 66 6666 1111 111111111 7 333333 7 5 7777 5 5 8 0 5 5 5 0 5 5 5 5 3333333333333 8888 5 44 22222 5 9 7 7 33 0
consensus : GAGAA--CAAATA----AA----TAT------G--AACTTTC-AA----A-TA-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA
Reference ( family-1120 ) : GAGAA--CAAATA----AA----TAT------G--AACTTTC-AA----A-TA-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA
gi|1 : GAGAA--CAAAT-------------T------G--A---------------TA-TAT-A--A-ACTTT-T-T-TTT-TAATTAT-G-C-A-CGA-TA-AAG-TTC-TTTGTTTTGAAAGCAAGTC----A-----ATTAC-----C-TGAG
gi|10 : tgcacgtgtatctcggcagtaataGAGAA--TAAATA----AA----TATAT----G--AAATTT--AA----A-TA-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGG-TA-AAT-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAcagaaggataatttgtatcacctgacaaataaaaagagaaa
gi|11 : AGAA--AAAATA----AA----TATAT----G--CACTTTC-AA----A-TA-CAT-T--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AATC----AA-T--ATTAC-----C-T-AGGAAT-A-A--AAAAAAAgta
gi|12 : AGAA--CAA-TA----AAATA-TAT------T--AACTTTC-AAG---A-TAACAT-G----ATTTT-T-T-TTT-TATTTCT-G-C-AACGA-TA---G-TTC-GT-------------AG-C----AA-T--A--------------GGAAT-A-A--GAAAGAAAAAACGTAgtat
gi|13 : AA--CAAATATAATAAGTTCTAT------A--AACTTTC-AA------------------------T-TCTTT-TAATTAT-G-C-A-CGA-TA-AAA-TTT-TT-------------CGTTTTGAAA-TTAATCGC-----C-TCACAAAT-A-A--GAAGAGAAta
gi|14 : AGAA--ATAATA----AA----TATC-----G--AACTTTC-A-----------AT-GAAT-ATTCT-T-------------T-G-C-A-CGA-TA-AGT-TTC-TT-------------ATTC----AA-T--ATTAC-----CATGAGGAAT-A-A--AAAAAAAA
gi|15 : agaAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGATTA-AAGTTTT-TT-------------TGTC----CA-T--ATTAC-----C-TGAGGAAT-A-A--GAAACAAAAA
gi|16 : C-AA----A-TA-CAT-G--TTATTTT-T-TTATT-TATTTAT-G-A-A-CGA-TC-ATT-TTC-TT-------------AGTC----AA-T--ATTA------C-TGAGGAAT-A-A--GAAAAAAAcagtat
gi|2 : GAGAATACAAATAT---AA----TATATT---G--AACTTTC-AA----AATA-CAT-G----ATTTT-TATATTTGTAGG-AT-A---A-CGA-TA-A-G-TTC-TT-------------AGTC----AA-TG-ATTACGTTATC-TGAG-AAT-A-A--GAAGAAAAAAA
gi|3 : AGAA--CAAATA----AA----TATATAATGG--ATCTTTC-AA------TA-CAT-G--T-ATTTT-T-TATTTCTAGTTAT-GCC-A-CCG-TATAAA-TTC-TTC------------AGTC----AT-T--ATTAC-----C-T-AGGAAT-T-AGGGGGGAAAAAAACGTAaaaccccgtata
gi|4 : A----TAT------A--AACTTTC-A--------------------TTTT-T-T-TTC-CATTTA--G-C-A-CGA-TA-AAG-TTC-TTTGTTTAGG-----AATC----AAGTCAATCAC-----G-TGACAAAT-A-A--GAAAAGAAAt
gi|5 : gaacaaaataagataatatctatattAA--CAAATA----AAATA-TAT------G--AACTTTCCAA----A-TA-CATTG--T-ATTTT-T-TATTT-TATTTA--G-CAA-CGA-T--AAG-TTCTTT-------------AGTCA---AA-T--ATTAC-----C-TGA-GAAT-AGA--GGAAAACAAAA-GTA
gi|6 : agaAAATA----AA----TAT------AT-GACTTTC-AAGCCCA-TA-CAT-G--T-ATTTT-T-TATGT-TTTTTATTG-C-ATCGA-TA-AAG-TTC-TT-------------GGTC----A--T--ATTAC-----C-TGATGAATAA-A--GAAAGAAAAAAT
gi|7 : ggagGAGAA--CAAATA----AA----TAT------ATCAACTT-C-AA----A-TA-CAT-G--T-ATTTTTT-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGA-GAAT-T-A--GAAAAAAAA
gi|8 : GAGAA--CAAATA----AA----TAT------G--AACTTTC-AA----A-TG-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CAA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTA------C-TGAGGAAT-A-AG-GAAAAAAAAAACGTAcccgt
gi|9 : GAGAA--CAAATA----AA----TAT------G--GACTTTC-AA----A-TG-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CAA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA
blockSeqs : TA TAAT GTTC ATAATGG C GCCCA A T AAT T A A G T C A A T T T T TGTTTAGG TTGA G TA GTTAT A A G GG C
blockSeqs : . T ATA ATTG . GA . . TT . . A C . . . T . . . . C A . CA . . . . G T
blockSeqs : . . ATA ATG . AA . . T . . C . . . . . . . . . . . . G . . . . . C
blockSeqs : . . . ATG . A . . T . . A . . . . . . . . . . . . . . . . . . C
blockSeqs : . . . ATC . A . . T . . T . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . CG . A . . T . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . . . AT . A . . T . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . . . T . A . . T . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . . . A . A . . T . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . . . A . A . . T . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . . . G . . . . T . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . . G . . . . . . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . G . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . .
blockSeqCons : A***** *************
originalCons : GAGAA--CAAATA----AA----TAT------G--AACTTTC-AA----A-TA-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA
finalCons : GAGAA--CAAATA----AA----TAT------G--AACTTTC-AAA-----TA-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA
Alignments
lowQualScore : 1111 222222222 111111 2222222222222
lowQualScore : 44 9999 6666 777777777 2 333333 2 2 7777 2 2 4 5 2 2 2 5 2 2 2 2 5555555555555 7777 2 99 66666 2 0 2 2 66 1
lowQualScore : .. .... .... ......... . ...... . . .... . . . . . . . . . . . . ............. .... . .. ..... . . . . .. .
lowQualScore : 66 6666 1111 111111111 7 333333 7 5 7777 5 5 8 0 5 5 5 0 5 5 5 5 3333333333333 8888 5 44 22222 5 9 7 7 33 0
consensus : GAGAA--CAAATA----AA----TAT------G--AACTTTC-AA----A-TA-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA
Reference ( family-1120 ) : GAGAA--CAAATA----AA----TAT------G--AACTTTC-AA----A-TA-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA
gi|1 : GAGAA--CAAAT-------------T------G--A---------------TA-TAT-A--A-ACTTT-T-T-TTT-TAATTAT-G-C-A-CGA-TA-AAG-TTC-TTTGTTTTGAAAGCAAGTC----A-----ATTAC-----C-TGAG
gi|10 : tgcacgtgtatctcggcagtaataGAGAA--TAAATA----AA----TATAT----G--AAATTT--AA----A-TA-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGG-TA-AAT-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAcagaaggataatttgtatcacctgacaaataaaaagagaaa
gi|11 : AGAA--AAAATA----AA----TATAT----G--CACTTTC-AA----A-TA-CAT-T--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AATC----AA-T--ATTAC-----C-T-AGGAAT-A-A--AAAAAAAgta
gi|12 : AGAA--CAA-TA----AAATA-TAT------T--AACTTTC-AAG---A-TAACAT-G----ATTTT-T-T-TTT-TATTTCT-G-C-AACGA-TA---G-TTC-GT-------------AG-C----AA-T--A--------------GGAAT-A-A--GAAAGAAAAAACGTAgtat
gi|13 : AA--CAAATATAATAAGTTCTAT------A--AACTTTC-AA------------------------T-TCTTT-TAATTAT-G-C-A-CGA-TA-AAA-TTT-TT-------------CGTTTTGAAA-TTAATCGC-----C-TCACAAAT-A-A--GAAGAGAAta
gi|14 : AGAA--ATAATA----AA----TATC-----G--AACTTTC-A-----------AT-GAAT-ATTCT-T-------------T-G-C-A-CGA-TA-AGT-TTC-TT-------------ATTC----AA-T--ATTAC-----CATGAGGAAT-A-A--AAAAAAAA
gi|15 : agaAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CGATTA-AAGTTTT-TT-------------TGTC----CA-T--ATTAC-----C-TGAGGAAT-A-A--GAAACAAAAA
gi|16 : C-AA----A-TA-CAT-G--TTATTTT-T-TTATT-TATTTAT-G-A-A-CGA-TC-ATT-TTC-TT-------------AGTC----AA-T--ATTA------C-TGAGGAAT-A-A--GAAAAAAAcagtat
gi|2 : GAGAATACAAATAT---AA----TATATT---G--AACTTTC-AA----AATA-CAT-G----ATTTT-TATATTTGTAGG-AT-A---A-CGA-TA-A-G-TTC-TT-------------AGTC----AA-TG-ATTACGTTATC-TGAG-AAT-A-A--GAAGAAAAAAA
gi|3 : AGAA--CAAATA----AA----TATATAATGG--ATCTTTC-AA------TA-CAT-G--T-ATTTT-T-TATTTCTAGTTAT-GCC-A-CCG-TATAAA-TTC-TTC------------AGTC----AT-T--ATTAC-----C-T-AGGAAT-T-AGGGGGGAAAAAAACGTAaaaccccgtata
gi|4 : A----TAT------A--AACTTTC-A--------------------TTTT-T-T-TTC-CATTTA--G-C-A-CGA-TA-AAG-TTC-TTTGTTTAGG-----AATC----AAGTCAATCAC-----G-TGACAAAT-A-A--GAAAAGAAAt
gi|5 : gaacaaaataagataatatctatattAA--CAAATA----AAATA-TAT------G--AACTTTCCAA----A-TA-CATTG--T-ATTTT-T-TATTT-TATTTA--G-CAA-CGA-T--AAG-TTCTTT-------------AGTCA---AA-T--ATTAC-----C-TGA-GAAT-AGA--GGAAAACAAAA-GTA
gi|6 : agaAAATA----AA----TAT------AT-GACTTTC-AAGCCCA-TA-CAT-G--T-ATTTT-T-TATGT-TTTTTATTG-C-ATCGA-TA-AAG-TTC-TT-------------GGTC----A--T--ATTAC-----C-TGATGAATAA-A--GAAAGAAAAAAT
gi|7 : ggagGAGAA--CAAATA----AA----TAT------ATCAACTT-C-AA----A-TA-CAT-G--T-ATTTTTT-TATTT-TATTTAT-G-C-A-CGA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGA-GAAT-T-A--GAAAAAAAA
gi|8 : GAGAA--CAAATA----AA----TAT------G--AACTTTC-AA----A-TG-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CAA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTA------C-TGAGGAAT-A-AG-GAAAAAAAAAACGTAcccgt
gi|9 : GAGAA--CAAATA----AA----TAT------G--GACTTTC-AA----A-TG-CAT-G--T-ATTTT-T-TATTT-TATTTAT-G-C-A-CAA-TA-AAG-TTC-TT-------------AGTC----AA-T--ATTAC-----C-TGAGGAAT-A-A--GAAAAAAAAAACGTA