lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111                                           
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000                                           
lowQualScore                  :                           111111                  1111      2222         222222222                                       4444444444444444444444     22222222222          11   1    2222222             111           11         33333   2222                                          5555555555555555555555         55555555555555555       3333333     22222222222          11  1111111  1  222222222222222          1         1111111               1111111              11111     11           111     777777777777777777777777777      11111      11            111                  7777777777777777777                                           111         1             333333333      1111            3       1             2         0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000          33       777       4       44    
lowQualScore                  :                999999     111111      44       3  1111  555 5555 3  3    666666666 55 55      44      1   4    4  8 66   0000000000000000000000     11111111111  66      55   2    7777777     4 0     333      4    22   4  33 00000   2222              4  66     66   0        5   0000000000000000000000     5   55555555555555555 4     4444444 0   00000000000   66     66  4444444  0  555555555555555   5   5  6       0 6666666    77 5       3333333      99  3   33333     33    77 5 5 111     999999999999999999999999999   5  00000      33 5 8888 77  444 6       99     1 2222222222222222222           6 6 2  2     3       8     8    555 11  6   6    88 0 0   555555555      5555 3   8 3    4       5             0         0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000          00       000       0       66    
lowQualScore                  :                ......     ......      ..       .  ....  ... .... .  .    ......... .. ..      ..      .   .    .  . ..   ......................     ...........  ..      ..   .    .......     . .     ...      .    ..   .  .. .....   ....              .  ..     ..   .        .   ......................     .   ................. .     ....... .   ...........   ..     ..  .......  .  ...............   .   .  .       . .......    .. .       .......      ..  .   .....     ..    .. . . ...     ...........................   .  .....      .. . .... ..  ... .       ..     . ...................           . . .  .     .       .     .    ... ..  .   .    .. . .   .........      .... .   . .    .       .             .         ............................................................................................................................................................................................................................................................................          ..       ...       .       ..    
lowQualScore                  :                666666     999999      22       1  0000  444 8888 1  1    999999999 00 00      66      9   4    4  9 11   6666666666666666666666     11111111111  11      00   2    2222222     9 1     333      4    22   4  77 77777   0000              4  11     99   9        7   1111111111111111111111     0   88888888888888888 4     2222222 1   22222222222   99     99  9999999  0  666666666666666   0   0  3       2 2222222    99 7       7777777      77  2   11111     66    99 7 7 999     999999999999999999999999999   7  66666      66 7 1111 99  222 7       22     6 5555555555555555555           7 7 2  5     2       0     0    666 88  4   0    88 6 6   555555555      2222 2   8 2    2       3             0         5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555          00       000       0       00    
consensus                     :    NGGGCTAAGCAC------GTTTT------GATCCG--AAACTCC-TC--G-TA---A--CCA-TA-AATA--A--AG--A--A--GGGGTCG-AACTCCTACC-AAGA-CG-A--AAAA-CT------------------ACCCA-----------CT--CGCTTC--AAACGCCT-------AAAAATTCAAAAA--CGCGTTT-CAAA--ATG-CGTAA--AT-CTACA-TATCGCAGTGCATAA-AG--TAATG--CCTCGACTTCAT-GCA--T-GCC-------GAATT---TCAAG-TCAGCA---GGT--C--TT-A-AATAG----C--GAGATA-ATA------CGT--CATCAT-TT-CA-GA-GA-TT-C-----GCCC---GTTT-ATT-TTTACTCGGACA-------TTTA--C-CGGTCCAGGTAACCCGATGGGTTTTCCC--CTATGACAG-CAGC--G-A-A-T-CCAGACAAGTNG--------------GACA--CAA-TT--CG-CATCTA--T-T-G--T--GCNG-A-ATTTCTC--ATAAATT----CTATGCTAC------TTACTTGCTCA-T-ATTTCAATAAAGTTCTCT-ATGTA-TGCT-A-TAATCCGAGTTTTT-ATTCTGCA-ACAACAT-CGACTGCTAACAAAACCTGCCA-TTTTGAC-AAACCAAAATCCATCAAGGAAGGCATCCGATGAATAACTGGGGTGCTGGATGCTGTTAGCTCAGAGTTTCCATAAAATGGCGGTTCTAGGCTCCGCTATTCAAAC----ACCAATACCTATTCGTGGGATCTCA------TCGGAAGTC----TGAGCATTATTCATACATGTCATGAATCTTTAATTGTTACTTCCAAAAAGTTCTCTATCTCGTGATAGTATTTTTCTCTCTATACTCGAG-TCAGTTTAAATCCCGATGTTTGACTCCTCTCTAATCTACTTCAATTTTTTTTTTTTTTTGGTCGCACCCACATCAGAAATATAGATAGCG
Reference ( gi|2 )            :    AGGGCTAAGCAC------GTTTT------GATCCG--AAACTCC-TC--A-TA---A--C-A-TA-AATA--A--A---A--A--GGGGTCG-AACTCCTACC-AAGA-CG-A--AAA--CT------------------ACCCA-----------CT--CGCTTC--AAAGGCCT-------AAAAATTCAAAAA--CGCGTTT-CAAA--ATG-CGTAA--AA-CTAGA-TATCGCAGTGCATAA-AG--TAATG--CTTTGACTTCAT-GCA--T-TCC-------GA--T---TCAAG-TCAGCA--AGGT--C--TT-A-AATAG----CTTGAGATA-ATA------CGT--CATCA--TT-CA-GA-GA-TT-C-----GCCA---GTTT-ATT-TTAACTCGGACA-------TTTA--C-CGGTCCAGGTACCCCGATGGGTTTTCCC--CTCTGACAA-CAGC--G-A-A-T-CCAGACATGTTG--------------TACA--CAA-TT--CA-CATCTA--T-T-G--T--GCGA-A-ATTTCTC--ATAAATT---TCTATGCTACATGTACTTACTTGCTCA-T-ACTTCAATAAAGTTCTCT-ATGTA-TGCT-G-TAATCCGAG-TTTT-ATTCTGCA-ACATTAT-CGACTGCTATCAAAACCTGCCATTTTTGACAAAACCAAAATCCA-CAAGAAAGA---TC---GAAT--TT--GAT--TGGATGCATTTATC-CAA----TGCA-AAAAAGGTG--TCTAGG------TATTTCAACTGAAAACAAAAACT----GTG---TTTCAACAAACACGGAAAACGGAGTGAGGTTTATTGATATATGTCAC--ATTTTT-ATT-----TTCCA--------------TCGTGATAGTATTTT------CATACTCGCGATCAG------------TGTTTGA-TCCGCT-TA--------CAA-TATTTTTTTTTTGGGGTCGCA---ACATCAG-AATATAGG-AGCG
gi|3                          :     GGGTTA-GCAC------GTTTTT-----GATCCT--AAAT--C-TC--G-TA---A----G-TA-TATA--A--G---A--AAGGGGGTCG-AACTCCTACC-AA-A-CA-A--AAA--CT--------------------CCT-----------CT--CGCTTCCCAAAGGCCT-------AAAAATT-AAAAA--CGCGTTT-CAAA--AT--CG--A--AT-CTAGA--ATCGCAGTGCATAA-AAGTTAATG--CTTTGA-TTCAT-GCA--T-TCC-------GAATT---TCAAG-TCA-C---GGGT--C--TTAA-AATAG----CCTGAGAT--ATA------C-T--CATCATTTT-CA-GATGA-TT-C-----GCCA---GTTT----------------A-------TTTA--C-CGGTCCAGGTAACCCGATGGGGTTTTCC--CTCTGACAA-CAGC--A-A-A-A-TCAGAAATG--G--------------GACA--CAA-TTTCCA-CATCTA--T-TGG--T--GCCA-A-TTTTCTC--ATAA--T---TCTATGCT-------CTTACTTGCTAATT-AATT-AATA---TCCTCTGATGTATTGCT-G-TAATCTGAG-TTTT-ATGCGGCA-ATAACATGGGACTG-TAACAAGA-CTGCCCATTTTGA
gi|10                         :     GGGCGTAGCAT------GTTTT------GATCCG--AAACTCCCTC--G-TA---A--CCA-TAGAATA--A--AGAAA--A--GGGGTCT-AACTTCTACC-AAGA-CG-ACAAAA--CT------------------ACC-A-----------CT--CGCTTCA-AAAGGCTT-------AAAAA-TCAAAAA--CGCGTTT-CAAAACATGCCGTAA--TT-CTAGA-TATTGCAGTGCAT-A-AG--TAATG--CTTTG
gi|14                         :   agGGGCTAAGCAC------GTTTT------GATCCG--AAACTCC-TC--G-TA---AC-C-A-TA-AATA--AAGA---A--A--GGGGTCT-AACTCCTGCC-AAGA-CGAA--AAA--CT------------------ACCCA-----------CT--CGCTTC--AAACGCCT-------AAAA--TCAAAAA--CGCGTTT-CAAA--ATG-g
gi|4                          :  cagGGGCTAAGTACATGTACGTTTT------GATCCG--AAGCTCT-CC--A-TA---AC-C-A-TA-ATTA--A--A---GATA--GGGATCA-AACTCAGACC-AAGA-AA-A--AAA--CCCGACAACAATAAAAAAAAACCCAAAATCTACACACC--TGCTTC--AAACGCCCCCCCAAAAAAAATCCTAAAA---GCGTTT-CAGA--ATG-TGT-A--AT-CTACG-TATTGCAGTGCAAAA-AG--TAATG--TTCTGTCTTCAT-GCA--A-GCC-------GAATT---TCAAG-TCA-CG--GCGT--C--GT-ACAATAG----C---AGATATATA------CGT--CATCAT-TT-CA-CG-GATTT-C-----GCC
gi|13                         :   agGGGCTAAGC-C------GTTTTTTTTTTGATCCG--AAACTCC-TA--G-TA---AACC-A-TA-AATA--A--AGA-A--A--GGGGTCGTAACTCCTACCTAAGAGCG-A--AAAACTT------------------ACCCA-----------CTTCCGCTTC--AAACG-CT-------AAAAAATCAAAAAACCGCG-TT-CAAA--ATG-tg
gi|22                         : acagGAGCTAGACAC------ATTTT------GATCCA--AAACTCC-TCGTA-TA---AC-C-A-TA-AA
gi|19                         :     GGGCTAAACAC------GTTTT------GGCCTA--AAACTCC-TT--G-TGGTTA--C-A--A-AATATCA--A---A--A--c
gi|18                         :  atagGGCTAAGCAC------GTTTC------GATCCGAAAAACTCA-TC--GTTA---A--C-ATTC-AATA--C--A---A--A--tatgtttagcccttg
gi|9                          :  acaggcaTAAGCCC------GTTTT------GACCAG--AAACTCT-TC--G-TA---A--CCA-TA-AATATAG--A---A--A--GGGATCG-AACTCCGACA-AAGA-CGAA--AAA--CT------------------ATCCA-----------CT--CGCTTC--AAA---CTATTAAA-AAAAATTAAAAAA--GGGTTTT-TAAAATATG-CGTAATCCA-CCG----ATCGCAGTGCACAA-AG--TAAacatgcttagcccc
gi|21                         :         TAAG---------GTTTT------GACCCG--AAACCCA-TC--G-TA---AC-C-A-TA-AAcaaattttaagtcacagtgtctta
gi|7                          :  tcacagctttGCAT------GTTTT------AATCCG--AAACTCC-TC--G-TA---A--CCA-TA-AATA--A--AGA-A--A--GAGATCG-AACTCAAATC-AAGG-CG-A--AAAA-TT------------------ACTCA-----------CT--CGCTTC--AAACACCT-------AAAAAT-CATAAA--AGCGTTT--AAA--ATG-CGCAA--T--CTACA-GATCGCAGTACATAC-AG--TAATA--TGTCGACTTCAT-GAA--T-GCC-------AAATT---TCAAG-TCA-----------C--------ATAG----T----GATA-ATA------CGT--CATCA--TT----------TT-T-----A--A---G----ATT-TT-ACTCGGACA-------TT
gi|5                          :        ttctGCAC------GTTTT------GATCCG--AAACTCC-CC--G-TA---A--CCA-TA-TATA--A--AGA-A--A--AGGGTCT-AACTCCTACC-AAGA-CG-A--AAAA-CT------------------ACCCG-----------CT--CGCTTC--AAACGCCT-------AAACAATCAAAAA--CGCATTT-CAAA--ATG-CATAA--
gi|20                         :                       TTTT------GATCC---AAACTCC-TC--G-TA---A--CCA-TA-AATA--AG-A---A--A--GGTATCG-AACTCCGACA-TAGA-TG-A--Atccataaaatagctggagatatacgtcatcttttcagagattttgcccatttatttttactaggacatttaccggtccaagtaacccgatgagttttcccttatgacagcagcgaaatccaaacaagatggacataattcacatctatcgtgcaga
gi|1                          :                                                                                                                                                  gaA-----------TT--CGCTTCC-AAACGCCT-------AGAAATCTAAAAAACCGCCTTTTCAAA--ATG-CTCAT--ACTCTACACTATCGCAGTGAGTAA-AG--TAATGTTCCTTGACATCATTGCAAGTGTCCTGGGAGTGA--TATTTCAAG-TCAGCAGAAGGTAACAATT-A-AATAGATAGCTTG-GATA-AGAAAAAAACGTTCCATAT--TT-CA-GA-GA-TTTC-----GCCTCGTGTTTGATTGTTACTTCGGGTACTATTGGTTTAATCACGGTCCA--TAACCCGATGGCTTTTCCCTACTATGACAAACCGCAAG-A-A-TTCCAGACAAGTGGGTTCGATCATCTAATACAAACAAGCT--CATCATATAGGTGT-G--TAGGCGGCA-ATTTCTC--ATAAATT----CTA-GCTAC------TTACTTGCTCA-TTACTTCA-TAA-GTT-TCT-ATGTA-TGCT-AATAATC-GAG-TTTTTATTCTGCATACAAT-T-CGACTGTTTCCAAAAGCTGTCA-TTTTGACCAAACCAAAATCCATCAAGAAAGGCATTCGATGAATAACTGGGATGCTGGATGCTGTTAGCTCAGAGTTTCCATAAAATGGCGGTTCTAGGCTCCGCTATTCAAAC----ACCAATACCTATTCGTGGGATCTCA------TCGGAAGTC----TGAGCATTATTCATACATGTCATGAATCTTTAATTGTTACTTCCAAAAAGTTCTCTATCTCGTGATAGTATTTTTCTCTCTATACTCGAG-TCAGTTTAAATCCCGATGTTTGACTCCTCTCTAATCTACTTCAATTTTTTTTTTTTTTTGGTCGCACCCACATCAGAAATATAGATAGCG
gi|16                         :                                                                                                                                                                                                       aaaaactaaccacacctacatgttaA--AT-CTATA-GATCGCAGTGTATAA-TG--CAATG--CCTCGATTTCAT-GCA--T-GCC-------GAATC---TCAAG-TCA-TA--TGGT--C--TTAA-AATAG----
gi|6                          :                                                                                                                                                                                                                                                GCACTGCATAATAG--T--TG--CCT--GCT--AT-GCA--T-GCG-------AA--T---TCAAGGTCA-CA---GGT--C--TA-A-AATAG----C--GAGATA--T-------CGT--CAT-A--TT-CA-C--GA-TT-CTCGGCGCCA----TTT-ATT-TTTACTCGGGAA-------TTTA--C-CGGT-CAGCGACC---GTGG--TTTCCT--C---GACG---AGC--G-A-A-T-CCAGACAAG-TG--------------GA-----AA-TT--CT-AAGCTAC-T-T-ACTT--GCTC-ATACTTCT---ATAAAGT---TCTCTG-TGCATGtatacacttattca
gi|15                         :                                                                                                                                                                                                                                                  acaaCATAA-AG--TAATG--TTTTGACTTCAT-GCA--T-GCA-------GAATT---TCAAG-TCAGT-----GT--C--TTAA-AATAG----C---AG-TT-ATA------CGT--CATCAT-TT-CA-GA-GATTT-C-----ACTC---GCTT-ATT-ctataatccgagtttttattctgc
gi|17                         :                                                                                                                                                                                                                                                                                                               AAA-TTAG-A--TGGT--C--CT-A-AA-AG----CA-GAGATA-A-A------CGT--TGTCG--TT-TTTGC-GA-TTTC-----ATCT---ATTT-ATT-TTTACTTTGATA-------TTTA--C-CGGTTCAGagtc
gi|5                          :                                                                                                                                                                                                                                                                                                                                   taa-A-AATAG----CTGGAGATA--TA------CGT--CATCT--TTTCA-GA-GA-TT-TT----GCCC---ATTT-ATT-TTTACTAGGACA-------TTTA--C-CGGTCCAAGTAACCCGATGAGTTTTCCC--TTATGACAG-CAGC--GAA-A-T-CCAAACAAGATG--------------GACA--TAA-TT--CA-CATCTA--T-C-G--T--GC
gi|12                         :                                                                                                                                                                                                                                                          gcacgttttgatccgaaactccccgtaaccatatataaagaaaagggtctaactcctaccaagacgaaaaactacccgctcgcttcaaacgcctaaacaatcaaaaacgcatttcaaaatgcataatccataT-T-----GCCC---TTTT-ATT-TTTACTCGGACA-------TTTA--A-CAGTCC--------------------TC--ATATGACAC-CAGC--G-A-AAT-TTAGACAGGTGG--------------GGGA--CAA-TT--AG-CATCTA--T-T-G--T--ACCG-A-TTTTCCCCCATAAATT----CTATG------ATACTTACCTATTCA-T-ATTTCAATAAAGTaga
gi|8                          :                                                                                                                                                                                                                                                                                                                                                                                                                                CA-------TTTA--C-CGGTCCAGGTGACGCGATGGGTTC-CCC--CTATGACAG-CAGT--G-ACA-T-TCAGA-------------------------------TT--TG-CATCTC--T-T-G--T--ACGG-A-ATTTCCC--ATAAAAT----CTAAGCTAC------TTACTTGCTCA-T-ATTTCAATAAAGTTCAGT-AGGTA-TGCT-A-TATCTTGAGTTTTT-ATTTTGCA-ACAACAT-CGACTGCTAAC-AAACCTGCCA-TTTTGAC-AAACCAAAATCCA-CAAGGAAGA---CC---GAAT--CT--GGT--T
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CC--CTATGACAG-CAGT--G-A-AAT-TCAGA----TCG--------------AACA--CAT-TT--CG-CACTTG--T-T-A--T--ACGG-A-ATT---C--A-AAATCAAACATATGCTAC-CGTA-TTA-------A-T-ATTTAAACGAAATTCTCT-ATGCA-TGCTGG-T--TGCGAG-TTCT----------------T-CAACTGCGAATAAATCC-ACCA-TTTGGACAAAAC
gi|6                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   actAAATT----CTAAGCTAC------TTACTTGCTCA-T-ACTTCTATAAAGTTCTCT-GTGCA-TGCT-A-TAATCCGAGTTTTT-ATTCTGCt

lowQualScore                  :                                 111111                                         11                    111111      22222222222222        11111111        22222222222222                    2222222             11            11      111                                                          11111111              33333333         1        333  11111   1111111111                         11111                             1111111                                              11111         1               22222222222222      111                   1111111               111111       111111               11                             111                                                              2             2        1    2222    11   3333                1   2222    1         11      222222         4444          2222   222     6666666        4444                       11      1   22222     55555555555555               222222          2    444444444444       1      1  33333333   1                     222       1        1    
lowQualScore                  :                      888888     111111      33       2   66   2     5        3 22 4   8   4      0   555555    4 33333333333333  3     44444444 4      33333333333333 55      99     4   0000000      3      11       4    11   4  111 7    0 88              4  55     777777  0     4   66    66666666  4           77777777  55 55  0 3      222  11111   4444444444   66     4 4     55  8  44444  4 9999    4         5      4444444    66 5      33      0     55  1   66        44444   0 5 5 0 5     777777  66666666666666      555 2    5   888 5    5555555 1  1   77 66  000000 5  5  666666     1      0  33   22     1       6     6    111     3   7            8   888 8      3  1 0   5 0 8   8       0             3    0   2    3333    88   1111         66   2 5   4444 2  5    4    88      888888     3   2222 2   4 2  4444   000     1111111      4 2222    66     2           88      5   66666     22222222222222               999999        3 0    666666666666       5   3  5  55555555   5 4          66       000       5        5    
lowQualScore                  :                      ......     ......      ..       .   ..   .     .        . .. .   .   .      .   ......    . ..............  .     ........ .      .............. ..      ..     .   .......      .      ..       .    ..   .  ... .    . ..              .  ..     ......  .     .   ..    ........  .           ........  .. ..  . .      ...  .....   ..........   ..     . .     ..  .  .....  . ....    .         .      .......    .. .      ..      .     ..  .   ..        .....   . . . . .     ......  ..............      ... .    .   ... .    ....... .  .   .. ..  ...... .  .  ......     .      .  ..   ..     .       .     .    ...     .   .            .   ... .      .  . .   . . .   .       .             .    .   .    ....    ..   ....         ..   . .   .... .  .    .    ..      ......     .   .... .   . .  ....   ...     .......      . ....    ..     .           ..      .   .....     ..............               ......        . .    ............       .   .  .  ........   . .          ..       ...       .        .    
lowQualScore                  :                      888888     111111      99       9   88   9     7        6 33 0   0   0      8   555555    0 55555555555555  6     55555555 0      55555555555555 55      55     0   0000000      8      00       0    00   0  666 4    1 99              0  55     888888  1     4   11    11111111  4           11111111  55 55  9 6      222  11111   6666666666   11     4 4     22  9  77777  0 3333    4         0      4444444    99 0      55      7     66  4   99        00000   2 0 0 0 0     999999  00000000000000      666 2    0   888 0    5555555 9  4   99 44  444444 7  1  444444     4      7  66   11     4       7     7    888     7   3            0   000 0      2  0 8   0 8 0   0       0             7    7   0    5555    55   0000         55   5 5   0000 5  5    0    00      000000     0   5555 5   0 5  0000   555     5555555      0 5555    55     5           00      5   55555     55555555555555               000000        0 0    555555555555       0   0  0  55555555   5 0          00       000       5        5    
consensus                     :          NGGGCTAAGCAC------GTTTT------GATCCG--AAACTCC-TCG--TAA-CCATA-AATAAAGA-A--G-GGG-TCG-AACTCCTACC------AAGA-C--------------GA-AAAAC--------T-ACCCAC--------------T--CGCTTC--AAACG-CCT-------AAAAATTCAAAAA--CGCGTTT-CAAA--ATG-CGTA-AATCTACA-TATCGCAGTGCATAA-AG--TAATG--CTTTGACTTCAT-GCA--TGCC--------GA-ATTTCAAGTCAGCG-G---GT--C--TT-A-AATAGC--GAG-----ATA-ATA------CGT--CATCA-T-TTCAGA-GA-TT-C---GC-CC---GTTT-ATTTTTACT-CGGACA-------TTTA--C-CGGTCCAGGTAACCCGATGGGTTTTCCC--CTATGACA----GCAGCG-A-A-T-CCAGACAAGTNGG------------ACACAATT---CGCATC-TAT---T-GTGCGG-----AATTTCTC--ATAAA-TT---C-TATGC------TACTTACTTGCTCAT--ATTTCAATAAAGTTCTCT-ATGTA-TGCT-G-TAATCCGAGTTTTTATTCTGCA-ACAACAT-CGACTGCTAACAAAACCTG-CCA-TTTTGAC-AAACCAAAATCCA-CAAGAAAGGCATCCGATGAATAACTGGGATGCTGGATGCNNTTANCTCAGAGTTTNCATAAAANGGCGGTTCTAGGCTCCGCTATTCNAACTGAAANCAANANCTATTCGTGGGATCTCAACAAACNCGGAAGNCGGAGTGAGNNTTATTNATACATGTCACGAATCTTTAATTGTTACTTCCAAAAAGTTCTCTATCTCGTGATAGTATTTTTCTCTCCATACTCGNGATCAGTTTAAATCCCGATGTTTGACTCCNCTCTAATCTACTTCAATTNTTTTTTTTTTNNGGTCGCACCCACATCAGAAATATAGGTAGCG
Reference ( family-112 )      :          NGGGCTAAGCAC------GTTTT------GATCCG--AAACTCC-TCG--TAA-CCATA-AATAAAGA-A--G-GGG-TCG-AACTCCTACC------AAGA-C--------------GA-AAAAC--------T-ACCCAC--------------T--CGCTTC--AAACG-CCT-------AAAAATTCAAAAA--CGCGTTT-CAAA--ATG-CGTA-AATCTACA-TATCGCAGTGCATAA-AG--TAATG--CCTCGACTTCAT-GCA--TGCC--------GA-ATTTCAAGTCAGCA-G---GT--C--TT-A-AATAGC--GAG-----ATA-ATA------CGT--CATCA-T-TTCAGA-GA-TT-C---GC-CC---GTTT-ATTTTTACT-CGGACA-------TTTA--C-CGGTCCAGGTAACCCGATGGGTTTTCCC--CTATGACA----GCAGCG-A-A-T-CCAGACAAGTNGG------------ACACAATT---CGCATC-TAT---T-GTGCNG-----AATTTCTC--ATAAA-TT---C-TATGC------TACTTACTTGCTCAT--ATTTCAATAAAGTTCTCT-ATGTA-TGCT-A-TAATCCGAGTTTTTATTCTGCA-ACAACAT-CGACTGCTAACAAAACCTG-CCA-TTTTGAC-AAACCAAAATCCATCAAGGAAGGCATCCGATGAATAACTGGGGTGCTGGATGCTGTTAGCTCAGAGTTTCCATAAAATGGCGGTTCTAGGCTCCGCTATTCAAAC----ACCAATACCTATTCGTGGGATCTCA------TCGGAAGTC----TGAGCATTATTCATACATGTCATGAATCTTTAATTGTTACTTCCAAAAAGTTCTCTATCTCGTGATAGTATTTTTCTCTCTATACTCGAG-TCAGTTTAAATCCCGATGTTTGACTCCTCTCTAATCTACTTCAATTTTTTTTTTTTTTTGGTCGCACCCACATCAGAAATATAGATAGCG
gi|1                          :                                                                                                                                 A-AAAAC--------T-AACCACACCTACATGTTAATT--CGCTTCC-AAACG-CCT-------AGAAATCTAAAAAACCGCCTTTTCAAA--ATG-CTCATACTCTACACTATCGCAGTGAGTAA-AG--TAATGTTCCTTGACATCATTGCAAGTGTCCTGGGAGTGATATTTCAAGTCAGCA-GAAGGTAACAATT-A-AATAGA--TAGCTTGGATA-AGAAAAAAACGTTCCAT-A-T-TTCAGA-GA-TTTC---GC-CTCGTGTTTGATTGTTACTTCGGGTACTATTGGTTTAATCACGGTCCA--TAACCCGATGGCTTTTCCCTACTATGACAAACCGCAA-G-A-A-TTCCAGACAAGTGGGTTCGATCATCTAATACAAACAAGCTCATCATATAGGT-GTGTAGGCGGCAATTTCTC--ATAAA-TT---C-TA-GC------TACTTACTTGCTCATT-ACTTCA-TAA-GTT-TCT-ATGTA-TGCT-AATAATC-GAGTTTTTATTCTGCATACAAT-T-CGACTGTTTCCAAAAGCTG-TCA-TTTTGACCAAACCAAAATCCATCAAGAAAGGCATTCGATGAATAACTGGGATGCTGGATGCTGTTAGCTCAGAGTTTCCATAAAATGGCGGTTCTAGGCTCCGCTATTCAAAC----ACCAATACCTATTCGTGGGATCTCA------TCGGAAGTC----TGAGCATTATTCATACATGTCATGAATCTTTAATTGTTACTTCCAAAAAGTTCTCTATCTCGTGATAGTATTTTTCTCTCTATACTCGAG-TCAGTTTAAATCCCGATGTTTGACTCCTCTCTAATCTACTTCAATTTTTTTTTTTTTTTGGTCGCACCCACATCAGAAATATAGATAGCG
gi|10                         :           GGGCGTAGCAT------GTTTT------GATCCG--AAACTCCCTCG--TAA-CCATAGAATAAAGA-AAAG-GGG-TCT-AACTTCTACC------AAGA-C--------------GACAAAAC--------T-ACC-AC--------------T--CGCTTC--AAAAGGCTT-------AAAAAT-CAAAAA--CGCGTTT-CAAAACATGCCGTA-ATTCTAGA-TATTGCAGTGCAT-A-AG--TAATG--CTTTG
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                          agCC--CTATGACA----GCAGTG-A-AAT-TCAGA----TCGA------------ACACATTT---CGCACT-TGT---T-ATACGG-----AATT---C--A-AAA-TCAAACATATGC------TAC---CGTATTAAT--ATTTAAACGAAATTCTCT-ATGCA-TGCTGG-T--TGCGAGTTCT----------------T-CAACTGCGAATAAATCC-A-CCA-TTTGGAC-AAAg
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                                             actT-T---GC-CC---TTTT-ATTTTTACT-CGGACA-------TTTA--A-CAGTCC--------------------TC--ATATGACA----CCAGCG-A-AAT-TTAGACAGGTGGG------------GGACAATT---AGCATC-TAT---T-GTACCG-----ATTTTCCCCCATAAA-TT---C-TATGA------TACTTACCTATTCAT--ATTTCAATAAAGTact
gi|13                         :           GGGCTAAGC-C------GTTTTTTTTTTGATCCG--AAACTCC-TAG--TAAACCATA-AATAAAGA-AA-G-GGG-TCGTAACTCCTACCT-----AAGAGC--------------GA-AAAAC--------TTACCCAC--------------TTCCGCTTC--AAACG--CT-------AAAAAATCAAAAAACCGCG-TT-CAAA--ATG-
gi|14                         :       acagGGGCTAAGCAC------GTTTT------GATCCG--AAACTCC-TCG--TAA-CCATA-AATAAAGA-AA-G-GGG-TCT-AACTCCTGCC------AAGA-C--------------GA-AAAAC--------T-ACCCAC--------------T--CGCTTC--AAACG-CCT-------AAAA--TCAAAAA--CGCGTTT-CAAA--ATG-
gi|15                         :                                                                                                                                                                                                                                                       cagCATAA-AG--TAATG--TTTTGACTTCAT-GCA--TGCA--------GA-ATTTCAAGTCAGT------GT--C--TTAA-AATAGC---AG------TT-ATA------CGT--CATCA-T-TTCAGA-GATTT-C---AC-TC---GCTT-ATT
gi|16                         :                                                                                                                                                                                                                                      -AATCTATA-GATCGCAGTGTATAA-TG--CAATG--CCTCGATTTCAT-GCA--TGCC--------GA-ATCTCAAGTCATAT-G---GT--C--TTAA-AATAGagtc
gi|17                         :                                                                                                                                                                                                                                                                                                                 AAATTAGAT-G---GT--C--CT-A-AA-AGCA-GAG-----ATA-A-A------CGT--TGTCG-T-TTTTGC-GA-TTTC---AT-CT---ATTT-ATTTTTACT-TTGATA-------TTTA--C-CGGTTCAGtatacacttattca
gi|18                         :         taaGGCTAAGCAC------GTTTC------GATCCGAAAAACTCA-TCGT-TAA-CATTC-AATACAAA-A--
gi|19                         :    acaggcaGGGCTAAACAC------GTTTT------GGCCTA--AAACTCC-TTG--TGG-TTACA-AAcatgcttagcccc
gi|2                          :       atagGGGCTAAGCAC------GTTTT------GATCCG--AAACTCC-TCA--TAA-C-ATA-AATAAA-A-A--G-GGG-TCG-AACTCCTACC------AAGA-C--------------GA-AAA-C--------T-ACCCAC--------------T--CGCTTC--AAAGG-CCT-------AAAAATTCAAAAA--CGCGTTT-CAAA--ATG-CGTA-AAACTAGA-TATCGCAGTGCATAA-AG--TAATG--CTTTGACTTCAT-GCA--TTCC--------GA---TTCAAGTCAGCAAG---GT--C--TT-A-AATAGCTTGAG-----ATA-ATA------CGT--CATCA-T-T-CAGA-GA-TT-C---GC-CA---GTTT-ATTTTAACT-CGGACA-------TTTA--C-CGGTCCAGGTACCCCGATGGGTTTTCCC--CTCTGACA----ACAGCG-A-A-T-CCAGACATGTTGT------------ACACAATT---CACATC-TAT---T-GTGCGA-----AATTTCTC--ATAAATTT---C-TATGCTACATGTACTTACTTGCTCAT--ACTTCAATAAAGTTCTCT-ATGTA-TGCT-G-TAATCCGAG-TTTTATTCTGCA-ACATTAT-CGACTGCTATCAAAACCTG-CCATTTTTGACAAAACCAAAATCCA-CAAGAAAG--ATC----GAAT--TTG----ATTGGATGCATTTATC-CAA----TGCA-AAAAAGGTG--TCTAGG------TATTTCAACTGAAAACAAAAACT----GTG---TTTCAACAAACACGGAAAACGGAGTGAGGTTTATTGATATATGTCAC--ATTTTT-ATT-----TTCCA--------------TCGTGATAGTATTTT------CATACTCGCGATCAG------------TGTTTGA-TCCGCT-TA--------CAA-TATTTTTTTTTTGGGGTCGCA---ACATCAG-AATATAGG-AGCGatatcaaaatatgtttagcccttg
gi|20                         :                            aTTTT------GATCC---AAACTCC-TCG--TAA-CCATA-AATAAGAA-A--G-GTA-TCG-AACTCCGACA------TAGA-T--------------GA-A
gi|21                         :             gaTAAG---------GTTTT------GACCCG--AAACCCA-TCG--TAA-CCATA-AA
gi|22                         : tcacagctttGAGCTAGACAC------ATTTT------GATCCA--AAACTCC-TCGTATAA-CCATA-AA
gi|3                          :           GGGTTA-GCAC------GTTTTT-----GATCCT--AAAT--C-TCG--TAA-GTATATAAGAAAG-----G-GGG-TCG-AACTCCTACC------AA-A-C---------------A-AAAAC--------T---CCTC--------------T--CGCTTCCCAAAGG-CCT-------AAAAATT-AAAAA--CGCGTTT-CAAA--AT--CG---AATCTAGA--ATCGCAGTGCATAA-AAGTTAATG--CTTTGA-TTCAT-GCA--TTCC--------GA-ATTTCAAGTCA-CG-G---GT--C--TTAA-AATAGCCTGAG-----AT--ATA------C-T--CATCATT-TTCAGATGA-TT-C---GC-CA---GTTT----------------A-------TTTA--C-CGGTCCAGGTAACCCGATGGGGTTTTCC--CTCTGACA----ACAGCA-A-A-A-TCAG--AAATGGG------------ACACAATTTC-CACATC-TAT---TGGTGCCA-----ATTTTCTC--AT-AA-TT---C-TATGC------T-CTTACTTGCTAATTAATT--AATA---TCCTCTGATGTATTGCT-G-TAATCTGAG-TTTTATGCGGCA-ATAACATGGGACTG-TAACAAGA-CTGCCCA-TTTTGAc
gi|4                          :           GGGCTAAGTACATGTACGTTTT------GATCCG--AAGCTCT-CCA--TAA-CCATA-ATTAAAGATA--G-GGA-TCA-AACTCAGACCAAGAAAAAAA-CCCGACAACAATAAAAA-AAAACCCAAAATCT-ACACAC--------------C--TGCTTC--AAACG-CCCCCCCAAAAAAAATCCTAAAA---GCGTTT-CAGA--ATG-TGTA-A-TCTACG-TATTGCAGTGCAAAA-AG--TAATG--TTCTGTCTTCAT-GCA--AGCC--------GA-ATTTCAAGTCA-CG-GC--GT--C--GT-ACAATAGC---AG-----ATATATA------CGT--CATCA-T-TTCACG-GATTT-C---GC-CT---G
gi|5                          :                agGCAC------GTTTT------GATCCG--AAACTCC-CCG--TAA-CCATA-TATAAAGA-A--AAGGG-TCT-AACTCCTACC------AAGA-C--------------GA-AAAAC--------T-ACCCGC--------------T--CGCTTC--AAACG-CCT-------AAACAATCAAAAA--CGCATTT-CAAA--ATG-CAT--AATC--CA-TA
gi|5                          :                                                                                                                                                                                                                                                                                                                                        -A-AATAGCTGGAG-----ATA--TA------CGT--CATCT-T-TTCAGA-GA-TT-TT--GC-CC---ATTT-ATTTTTACT-AGGACA-------TTTA--C-CGGTCCAAGTAACCCGATGAGTTTTCCC--TTATGACA----GCAGCGAA-A-T-CCAAACAAGATGG------------ACATAATT---CACATC-TAT---C-GTGCAG-----Aaaatagctggagatatacgtcatcttttcagagattttgcccatttatttttactaggacatttaccggtccaagtaacccgatgagttttcccttatgacagcagcgaaatccaaacaagatggacataattcacatctatcgtgcaga
gi|6                          :                                                                                                                gcacgttttgatccgaaactccccgtaaccatatataaagaaaagggtctaactcctaccaagacgaaaaactacccgctcgcttcaaacgcctaaacaatcaaaaacgcatttcaaaatgcataatccataGCACTGCATAATAG--T--TG--CCT--GCT--AT-GCA--TGC---------GA-ATTCAAGGTCA-CA-G---GT--C--TA-A-AATAGC--GAG-----ATA------------T--CGTCA-TATTCAC--GA-TT-CTCGGCGCC---ATTT-ATTTTTACT-CGGGAA-------TTTA--C-CGGTC--AGCGACC--GTGG--TTTCCT--C---GACG------AGCG-A-A-T-CCAGACAAGT-GG------------A---AATT---CTAAGC-TAC---T--TAC---------TTGCTC--A-----------------------TACTT-CT---------------ATAAAGTTCTCT-GTGCA-TGCT-A-TAATCCGAGTTTTTATTCTGC
gi|7                          :              acaaGCAT------GTTTT------AATCCG--AAACTCC-TCG--TAA-CCATA-AATAAAGA-A--A-GAGATCG-AACTCAAATC------AAGG-C--------------GA-AAAAT--------T-ACTCAC--------------T--CGCTTC--AAACA-CCT-------AAAAAT-CATAAA--AGCGTTT--AAA--ATG-CGCA-A-TCTACA-GATCGCAGTACATAC-AG--TAATA--TGTCGACTTCAT-GAA--TGCC--------AA-ATTTCAAGTCA-C-------------------ATAGT----G-----ATA-ATA------CGT--CATCA-T-TTTTAA-GA-----------------------TTTTACT-CGGACA-------TT
gi|8                          :                                                                                                                                                                                                                                                                                                                                                                                                                             ttctCA-------TTTA--C-CGGTCCAGGTGACGCGATGGGTTC-CCC--CTATGACA----GCAGTG-ACA-T-TCAGA--------------------------TT---TGCATC-TCT---T-GTACGG-----AATTTCCC--ATAAA-AT---C-TAAGC------TACTTACTTGCTCAT--ATTTCAATAAAGTTCAGT-AGGTA-TGCT-A-TATCTTGAGTTTTTATTTTGCA-ACAACAT-CGACTGCTAAC-AAACCTG-CCA-TTTTGAC-AAACCAAAATCCA-CAAGGAAGAC
gi|9                          :               TAAGCCC------GTTTT------GACCAG--AAACTCT-TCG--TAA-CCATA-AATATAGA-A--A-GGGATCG-AACTCCGACA------AAGA-C--------------GA-AAAAC--------T-ATCCAC--------------T--CGCTTC--AAACT-ATTAAA----AAAAATTAAAAAA--GGGTTTT-TAAAATATG-CGT--AATCCACC-GATCGCAGTGCACAA-AG--TAA-------------------------C--------AA-ATTTTAAGTCA-CA-GT--GT--C--TT-A-cgaatctggtt

lowQualScore                  :                                 111111                                         11                    111111      22222222222222        11111111        22222222222222                    2222222             11            11      111                                                          11111111              33333333     11111        22222222222222222222222                         11111                             1111111                                              11111         1               22222222222222      111          11111                          111111       111111               11                             111                                                              2             1        1    2222    222222   11              1   2222    1         11      222222         2222          2222   222     3333333        2222                       11      1   22222     55555555555555               222222          1    444444444444       1      1  33333333   1                     222       1        1    
lowQualScore                  :                      888888     111111      33       2   66   2     5        3 22 4   8   4      0   555555    4 33333333333333  3     44444444 4      33333333333333 55      99     4   0000000      3      11       4    11   4  111 7    0 88              4  55     66            5   66    88888888  5           66666666  66 55555 4      88888888888888888888888   66     4 4     55  8  44444  4 9999    4         5      4444444    66 5      33      0     55  1   66        44444   0 5 5 0 5     777777  66666666666666      555 2    5   22222 5  66  666 1  1   77 66  000000 5  5  666666     1      0  33   22     1       6     6    111     3   7            8   888 8      3  1 0   5 0 8   8       0             3        2    3333    555555   77       22   1 5   4444 1  5    1    88      888888     1   4444 1   1 1  4444   000     0000000      1 3333    22     1           88      5   66666     22222222222222               999999        1 5    666666666666       5   1  5  55555555   5 1          22       000       5        5    
lowQualScore                  :                      ......     ......      ..       .   ..   .     .        . .. .   .   .      .   ......    . ..............  .     ........ .      .............. ..      ..     .   .......      .      ..       .    ..   .  ... .    . ..              .  ..     ..            .   ..    ........  .           ........  .. ..... .      .......................   ..     . .     ..  .  .....  . ....    .         .      .......    .. .      ..      .     ..  .   ..        .....   . . . . .     ......  ..............      ... .    .   ..... .  ..  ... .  .   .. ..  ...... .  .  ......     .      .  ..   ..     .       .     .    ...     .   .            .   ... .      .  . .   . . .   .       .             .        .    ....    ......   ..       ..   . .   .... .  .    .    ..      ......     .   .... .   . .  ....   ...     .......      . ....    ..     .           ..      .   .....     ..............               ......        . .    ............       .   .  .  ........   . .          ..       ...       .        .    
lowQualScore                  :                      888888     111111      99       9   88   9     7        6 33 0   0   0      8   555555    0 55555555555555  6     55555555 0      55555555555555 55      55     0   0000000      8      00       0    00   0  666 4    1 99              0  55     11            0   99    11111111  0           66666666  11 44444 0      33333333333333333333333   11     4 4     22  9  77777  0 3333    4         0      4444444    99 0      55      7     66  4   99        00000   2 0 0 0 0     999999  00000000000000      666 2    0   55555 0  99  666 9  4   99 44  444444 7  1  444444     4      7  66   11     4       7     7    333     7   3            0   000 0      2  0 8   0 8 0   0       0             3        0    5555    000000   55       00   0 5   0000 0  5    0    00      000000     0   0000 0   0 0  0000   555     5555555      0 0000    00     0           00      5   55555     55555555555555               000000        0 5    555555555555       0   0  0  55555555   5 0          00       000       5        5    
consensus                     :          NGGGCTAAGCAC------GTTTT------GATCCG--AAACTCC-TCG--TAA-CCATA-AATAAAGA-A--G-GGG-TCG-AACTCCTACC------AAGA-C--------------GA-AAAAC--------T-ACCCAC--------------T--CGCTTC--AAACG-CCT-------AAAAATTCAAAAA--CGCGTTT-CAAA--ATG-CGTA-AATCTACA-TATCGCAGTGCATAA-AG--TAATG--CTTTGACTTCAT-GCA--TGCC--------GA-ATTTCAAGTCAGCG-G---GT--C--TT-A-AATAGC--GAG-----ATA-ATA------CGT--CATCA-T-TTCAGA-GA-TT-C---GC-CC---GTTT-ATTTTTACT-CGGACA-------TTTA--C-CGGTCCAGGTAACCCGATGGGTTTTCCC--CTATGACA----GCAGCG-A-A-T-CCAGACAAGTNGG------------ACACAATT---CGCATC-TAT-----T-GT--GCGG-AATTTCTC--ATAAA-TT---C-TATGC------TACTTACTTGCTCAT--ATTTCAATAAAGTTCTCT-ATGTA-TGCT-G-TAATCCGAGTTTTTATTCTGCA-ACAACAT-CGACTGCTAACAAAACCTG-CCA-TTTTGAC-AAACCAAAATCCA-CAAGAAAGGCATCCGATGAATAACTGGGATGCTGGATGCNNTTANCTCAGAGTTTNCATAAAANGGCGGTTCTAGGCTCCGCTATTCNAACTGAAANCAANANCTATTCGTGGGATCTCAACAAACNCGGAAGNCGGAGTGAGNNTTATTNATACATGTCACGAATCTTTAATTGTTACTTCCAAAAAGTTCTCTATCTCGTGATAGTATTTTTCTCTCCATACTCGNGATCAGTTTAAATCCCGATGTTTGACTCCNCTCTAATCTACTTCAATTNTTTTTTTTTTNNGGTCGCACCCACATCAGAAATATAGGTAGCG
Reference ( family-112 )      :          NGGGCTAAGCAC------GTTTT------GATCCG--AAACTCC-TCG--TAA-CCATA-AATAAAGA-A--G-GGG-TCG-AACTCCTACC------AAGA-C--------------GA-AAAAC--------T-ACCCAC--------------T--CGCTTC--AAACG-CCT-------AAAAATTCAAAAA--CGCGTTT-CAAA--ATG-CGTA-AATCTACA-TATCGCAGTGCATAA-AG--TAATG--CTTTGACTTCAT-GCA--TGCC--------GA-ATTTCAAGTCAGCG-G---GT--C--TT-A-AATAGC--GAG-----ATA-ATA------CGT--CATCA-T-TTCAGA-GA-TT-C---GC-CC---GTTT-ATTTTTACT-CGGACA-------TTTA--C-CGGTCCAGGTAACCCGATGGGTTTTCCC--CTATGACA----GCAGCG-A-A-T-CCAGACAAGTNGG------------ACACAATT---CGCATC-TAT-----T-GT--GCGG-AATTTCTC--ATAAA-TT---C-TATGC------TACTTACTTGCTCAT--ATTTCAATAAAGTTCTCT-ATGTA-TGCT-G-TAATCCGAGTTTTTATTCTGCA-ACAACAT-CGACTGCTAACAAAACCTG-CCA-TTTTGAC-AAACCAAAATCCA-CAAGAAAGGCATCCGATGAATAACTGGGATGCTGGATGCNNTTANCTCAGAGTTTNCATAAAANGGCGGTTCTAGGCTCCGCTATTCNAACTGAAANCAANANCTATTCGTGGGATCTCAACAAACNCGGAAGNCGGAGTGAGNNTTATTNATACATGTCACGAATCTTTAATTGTTACTTCCAAAAAGTTCTCTATCTCGTGATAGTATTTTTCTCTCCATACTCGNGATCAGTTTAAATCCCGATGTTTGACTCCNCTCTAATCTACTTCAATTNTTTTTTTTTTNNGGTCGCACCCACATCAGAAATATAGGTAGCG
gi|1                          :                                                                                                                                 A-AAAAC--------T-AACCACACCTACATGTTAATT--CGCTTCC-AAACG-CCT-------AGAAATCTAAAAAACCGCCTTTTCAAA--ATG-CTCATACTCTACACTATCGCAGTGAGTAA-AG--TAATGTTCCTTGACATCATTGCAAGTGTCCTGGGAGTGATATTTCAAGTCAGCA-GAAGGTAACAATT-A-AATAGA--TAGCTTGGATA-AGAAAAAAACGTTCCAT-A-T-TTCAGA-GA-TTTC---GC-CTCGTGTTTGATTGTTACTTCGGGTACTATTGGTTTAATCACGGTCCA--TAACCCGATGGCTTTTCCCTACTATGACAAACCGCAA-G-A-A-TTCCAGACAAGTGGGTTCGATCATCTAATACAAACAAGCTCATCATATAGGTGT-GTAGGCGGCAATTTCTC--ATAAA-TT---C-TA-GC------TACTTACTTGCTCATT-ACTTCA-TAA-GTT-TCT-ATGTA-TGCT-AATAATC-GAGTTTTTATTCTGCATACAAT-T-CGACTGTTTCCAAAAGCTG-TCA-TTTTGACCAAACCAAAATCCATCAAGAAAGGCATTCGATGAATAACTGGGATGCTGGATGCTGTTAGCTCAGAGTTTCCATAAAATGGCGGTTCTAGGCTCCGCTATTCAAAC----ACCAATACCTATTCGTGGGATCTCA------TCGGAAGTC----TGAGCATTATTCATACATGTCATGAATCTTTAATTGTTACTTCCAAAAAGTTCTCTATCTCGTGATAGTATTTTTCTCTCTATACTCGAG-TCAGTTTAAATCCCGATGTTTGACTCCTCTCTAATCTACTTCAATTTTTTTTTTTTTTTGGTCGCACCCACATCAGAAATATAGATAGCG
gi|10                         :           GGGCGTAGCAT------GTTTT------GATCCG--AAACTCCCTCG--TAA-CCATAGAATAAAGA-AAAG-GGG-TCT-AACTTCTACC------AAGA-C--------------GACAAAAC--------T-ACC-AC--------------T--CGCTTC--AAAAGGCTT-------AAAAAT-CAAAAA--CGCGTTT-CAAAACATGCCGTA-ATTCTAGA-TATTGCAGTGCAT-A-AG--TAATG--CTTTG
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                          agCC--CTATGACA----GCAGTG-A-AAT-TCAGA----TCGA------------ACACATTT---CGCACT-TGT-----T-AT--ACGG-AATT---C--A-AAA-TCAAACATATGC------TAC---CGTATTAAT--ATTTAAACGAAATTCTCT-ATGCA-TGCTGG-T--TGCGAGTTCT----------------T-CAACTGCGAATAAATCC-A-CCA-TTTGGAC-AAAg
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                                             actT-T---GC-CC---TTTT-ATTTTTACT-CGGACA-------TTTA--A-CAGTCC--------------------TC--ATATGACA----CCAGCG-A-AAT-TTAGACAGGTGGG------------GGACAATT---AGCATC-TAT-----T-GT--ACCG-ATTTTCCCCCATAAA-TT---C-TATGA------TACTTACCTATTCAT--ATTTCAATAAAGTact
gi|13                         :           GGGCTAAGC-C------GTTTTTTTTTTGATCCG--AAACTCC-TAG--TAAACCATA-AATAAAGA-AA-G-GGG-TCGTAACTCCTACCT-----AAGAGC--------------GA-AAAAC--------TTACCCAC--------------TTCCGCTTC--AAACG--CT-------AAAAAATCAAAAAACCGCG-TT-CAAA--ATG-
gi|14                         :       acagGGGCTAAGCAC------GTTTT------GATCCG--AAACTCC-TCG--TAA-CCATA-AATAAAGA-AA-G-GGG-TCT-AACTCCTGCC------AAGA-C--------------GA-AAAAC--------T-ACCCAC--------------T--CGCTTC--AAACG-CCT-------AAAA--TCAAAAA--CGCGTTT-CAAA--ATG-
gi|15                         :                                                                                                                                                                                                                                                       cagCATAA-AG--TAATG--TTTTGACTTCAT-GCA--TGCA--------GA-ATTTCAAGTCAGT------GT--C--TTAA-AATAGC---AG------TT-ATA------CGT--CATCA-T-TTCAGA-GATTT-C---AC-TC---GCTT-ATT
gi|16                         :                                                                                                                                                                                                                                      -AATCTATA-GATCGCAGTGTATAA-TG--CAATG--CCTCGATTTCAT-GCA--TGCC--------GA-ATCTCAAGTCATAT-G---GT--C--TTAA-AATAGagtc
gi|17                         :                                                                                                                                                                                                                                                                                                                 AAATTAGAT-G---GT--C--CT-A-AA-AGCA-GAG-----ATA-A-A------CGT--TGTCG-T-TTTTGC-GA-TTTC---AT-CT---ATTT-ATTTTTACT-TTGATA-------TTTA--C-CGGTTCAGtatacacttattca
gi|18                         :         taaGGCTAAGCAC------GTTTC------GATCCGAAAAACTCA-TCGT-TAA-CATTC-AATACAAA-A--
gi|19                         :    acaggcaGGGCTAAACAC------GTTTT------GGCCTA--AAACTCC-TTG--TGG-TTACA-AAcatgcttagcccc
gi|2                          :       atagGGGCTAAGCAC------GTTTT------GATCCG--AAACTCC-TCA--TAA-C-ATA-AATAAA-A-A--G-GGG-TCG-AACTCCTACC------AAGA-C--------------GA-AAA-C--------T-ACCCAC--------------T--CGCTTC--AAAGG-CCT-------AAAAATTCAAAAA--CGCGTTT-CAAA--ATG-CGTA-AAACTAGA-TATCGCAGTGCATAA-AG--TAATG--CTTTGACTTCAT-GCA--TTCC--------GA---TTCAAGTCAGCAAG---GT--C--TT-A-AATAGCTTGAG-----ATA-ATA------CGT--CATCA-T-T-CAGA-GA-TT-C---GC-CA---GTTT-ATTTTAACT-CGGACA-------TTTA--C-CGGTCCAGGTACCCCGATGGGTTTTCCC--CTCTGACA----ACAGCG-A-A-T-CCAGACATGTTGT------------ACACAATT---CACATC-TAT-----T-GT--GCGA-AATTTCTC--ATAAATTT---C-TATGCTACATGTACTTACTTGCTCAT--ACTTCAATAAAGTTCTCT-ATGTA-TGCT-G-TAATCCGAG-TTTTATTCTGCA-ACATTAT-CGACTGCTATCAAAACCTG-CCATTTTTGACAAAACCAAAATCCA-CAAGAAAG--ATC----GAAT--TT--GAT--TGGATGCATTTATC-CAA----TGCA-AAAAAGGTG--TCTAGG------TATTTCAACTGAAAACAAAAACT----GTG---TTTCAACAAACACGGAAAACGGAGTGAGGTTTATTGATATATGTCAC--ATTTTT-ATT-----TTCCA--------------TCGTGATAGTATTTT------CATACTCGCGATCAG------------TGTTTGA-TCCGCT-TA--------CAA-TATTTTTTTTTTGGGGTCGCA---ACATCAG-AATATAGG-AGCGatatcaaaatatgtttagcccttg
gi|20                         :                            aTTTT------GATCC---AAACTCC-TCG--TAA-CCATA-AATAAGAA-A--G-GTA-TCG-AACTCCGACA------TAGA-T--------------GA-A
gi|21                         :             gaTAAG---------GTTTT------GACCCG--AAACCCA-TCG--TAA-CCATA-AA
gi|22                         : tcacagctttGAGCTAGACAC------ATTTT------GATCCA--AAACTCC-TCGTATAA-CCATA-AA
gi|3                          :           GGGTTA-GCAC------GTTTTT-----GATCCT--AAAT--C-TCG--TAA-GTATATAAGAAAG-----G-GGG-TCG-AACTCCTACC------AA-A-C---------------A-AAAAC--------T---CCTC--------------T--CGCTTCCCAAAGG-CCT-------AAAAATT-AAAAA--CGCGTTT-CAAA--AT--CG---AATCTAGA--ATCGCAGTGCATAA-AAGTTAATG--CTTTGA-TTCAT-GCA--TTCC--------GA-ATTTCAAGTCA-CG-G---GT--C--TTAA-AATAGCCTGAG-----AT--ATA------C-T--CATCATT-TTCAGATGA-TT-C---GC-CA---GTTT----------------A-------TTTA--C-CGGTCCAGGTAACCCGATGGGGTTTTCC--CTCTGACA----ACAGCA-A-A-A-TCAG--AAATGGG------------ACACAATTTC-CACATC-TAT-----TGGT--GCCA-ATTTTCTC--AT-AA-TT---C-TATGC------T-CTTACTTGCTAATTAATT--AATA---TCCTCTGATGTATTGCT-G-TAATCTGAG-TTTTATGCGGCA-ATAACATGGGACTG-TAACAAGA-CTGCCCA-TTTTGAc
gi|4                          :           GGGCTAAGTACATGTACGTTTT------GATCCG--AAGCTCT-CCA--TAA-CCATA-ATTAAAGATA--G-GGA-TCA-AACTCAGACCAAGAAAAAAA-CCCGACAACAATAAAAA-AAAACCCAAAATCT-ACACAC--------------C--TGCTTC--AAACG-CCCCCCCAAAAAAAATCCTAAAA---GCGTTT-CAGA--ATG-TGTA-A-TCTACG-TATTGCAGTGCAAAA-AG--TAATG--TTCTGTCTTCAT-GCA--AGCC--------GA-ATTTCAAGTCA-CG-GC--GT--C--GT-ACAATAGC---AG-----ATATATA------CGT--CATCA-T-TTCACG-GATTT-C---GC-CT---G
gi|5                          :                agGCAC------GTTTT------GATCCG--AAACTCC-CCG--TAA-CCATA-TATAAAGA-A--AAGGG-TCT-AACTCCTACC------AAGA-C--------------GA-AAAAC--------T-ACCCGC--------------T--CGCTTC--AAACG-CCT-------AAACAATCAAAAA--CGCATTT-CAAA--ATG-CAT--AATC--CA-TA
gi|5                          :                                                                                                                                                                                                                                                                                                                                        -A-AATAGCTGGAG-----ATA--TA------CGT--CATCT-T-TTCAGA-GA-TT-TT--GC-CC---ATTT-ATTTTTACT-AGGACA-------TTTA--C-CGGTCCAAGTAACCCGATGAGTTTTCCC--TTATGACA----GCAGCGAA-A-T-CCAAACAAGATGG------------ACATAATT---CACATC-TAT-----C-GT--GCAG-Aaaatagctggagatatacgtcatcttttcagagattttgcccatttatttttactaggacatttaccggtccaagtaacccgatgagttttcccttatgacagcagcgaaatccaaacaagatggacataattcacatctatcgtgcaga
gi|6                          :                                                                                                                gcacgttttgatccgaaactccccgtaaccatatataaagaaaagggtctaactcctaccaagacgaaaaactacccgctcgcttcaaacgcctaaacaatcaaaaacgcatttcaaaatgcataatccataGCACTGCATAATAG--T--TG--CCT--GCT--AT-GCA--TGC---------GA-ATTCAAGGTCA-CA-G---GT--C--TA-A-AATAGC--GAG-----ATA------------T--CGTCA-TATTCAC--GA-TT-CTCGGCGCC---ATTT-ATTTTTACT-CGGGAA-------TTTA--C-CGGTC--AGCGACC--GTGG--TTTCCT--C---GACG------AGCG-A-A-T-CCAGACAAGT-GG------------A---AATT---CTAAGC-TAC-----T--T--AC-----TTGCTC--A-----------------------TACTT-CT---------------ATAAAGTTCTCT-GTGCA-TGCT-A-TAATCCGAGTTTTTATTCTGC
gi|7                          :              acaaGCAT------GTTTT------AATCCG--AAACTCC-TCG--TAA-CCATA-AATAAAGA-A--A-GAGATCG-AACTCAAATC------AAGG-C--------------GA-AAAAT--------T-ACTCAC--------------T--CGCTTC--AAACA-CCT-------AAAAAT-CATAAA--AGCGTTT--AAA--ATG-CGCA-A-TCTACA-GATCGCAGTACATAC-AG--TAATA--TGTCGACTTCAT-GAA--TGCC--------AA-ATTTCAAGTCA------------C--------ATAGT--GA-------TA-ATA------CGT--CATCA-T-TTTTAA-GA-----------------------TTTTACT-CGGACA-------TT
gi|8                          :                                                                                                                                                                                                                                                                                                                                                                                                                             ttctCA-------TTTA--C-CGGTCCAGGTGACGCGATGGGTTC-CCC--CTATGACA----GCAGTG-ACA-T-TCAGA--------------------------TT---TGCATC-TCT-----T-GT--ACGG-AATTTCCC--ATAAA-AT---C-TAAGC------TACTTACTTGCTCAT--ATTTCAATAAAGTTCAGT-AGGTA-TGCT-A-TATCTTGAGTTTTTATTTTGCA-ACAACAT-CGACTGCTAAC-AAACCTG-CCA-TTTTGAC-AAACCAAAATCCA-CAAGGAAGAC
gi|9                          :               TAAGCCC------GTTTT------GACCAG--AAACTCT-TCG--TAA-CCATA-AATATAGA-A--A-GGGATCG-AACTCCGACA------AAGA-C--------------GA-AAAAC--------T-ATCCAC--------------T--CGCTTC--AAACT-ATTAAA----AAAAATTAAAAAA--GGGTTTT-TAAAATATG-CGT--AATCCACC-GATCGCAGTGCACAA-AG--TAAcgaatctggtt