lowQualScore : 22222222222222222222222222222222222222 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 22222222222222222222222222222222222222222222222222222222222222222 11111111111111111
lowQualScore : 3333333333333 1 11 1 111 2 1 111 1 3333333 33 11 11 1 222 44444444444444444 1 222 2 1 555555555 1 1 22 66666666666666 1111 1 444444444 111 77777777777777777777777777777777777777 333 1 11 11 22 111 22 5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 33333 1 11 222 3 1 1 1111 4 11111 1 1 1 1 1 3 1 111111 1 1 88888888888888888888888888888888888888888888888888888888888888888888 2222 111 33333333333333333 1 1 11 11111 1 33333 33 1 5555555555555 2 111 33333333333333333 11 11111111111111111111111111111111111 111 4 1 5555555555555 555555555555555 1 2222222 33 111111 222 44444 11111 222 777777777777777777777777777 1 1 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 444 11111 2222222 22 11 77777777777777777777777777777777777 1111 111 1 111 4 1 222222222 111 5555555555555 5555555555 2 1 3333 3 1111 111 33 22 1 444 1 3333333333 4444444444444444444444 33 33333 11 33 666666666666666666666666666666666666666666666666666666666666666666 2 222222 11 44 11111 11 22 555555555555555555555555555555 1111111 4444444444 1 11 88888888888888888888888888888888888888888888888888888888888888888888 1111 22222 22 222222 666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 66666666666666666666666666666 444444444444444 22222 1111 22222222222222 666 2 11 2 8888888888888888 1 3 222 11 55555555555555555555555555555555 2 22 5555555555555555555555 11 1 11111111111111111111111111111111111111111111111111111111111111111 333 11 55 3333 11 22222 444444444444444444444 11 1 333333 22 111 2222222 2222222 444444 22222222 44444444444444444 7777777777777777777777777777777777777 111111 111 222 3 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 222 1 11 111 3333 444444444 99999999999999999 555555555555555555555 444444444444444444444444444444 4444444444 7777777777777777777777777777777777 333 111111 3333333 666666666666666666666666 3 55555555555555 1 222
lowQualScore : 5555555555555 0 33 0 111 6 3 777 3 7777777 11 88 88 3 333 88888888888888888 3 555 6 3 888888888 2 3 00 2 77777777777777 4444 0 000000000 111 55555555555555555555555555555555555555 1 111 0 33 66 999 33 0 8 666 8 8 33 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 00000 2 0 33 4 555 2 0 0 0 3 9999 0 88888 0 0 0 0 0 1 0 444444 0 0 33333333333333333333333333333333333333333333333333333333333333333333 5555 444 22222222222222222 0 0 33 22222 0 2 33333 77 2 0 2222222222222 1 111 44444444444444444 33 22222222222222222222222222222222222 666 2 0 0 0000000000000 111111111111111 4 0 5555555 4 11 888888 111 11111 33333 666 8 111111111111111111111111111 3 0 0 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111 3 88888 5555555 88 88 5 11 77777777777777777777777777777777777 8 3 9999 8 8 8 444 88 3 0 3 777 2 0 6 777777777 111 9999999999999 8 8 8 2222222222 2 3 0 2 1111 8 8 0 6 6 6 0000 111 00 44 77 4 666 3 5 1 5 3333333333 5555555555555555555555 5 77 99 0 11111 0 11 11 777777777777777777777777777777777777777777777777777777777777777777 0 333333 11 0 33 1 77777 6 55 22 6 222222222222222222222222222222 6 6 77 5 5 5 9999999 8888888888 5 77 1 5 00 77 99999999999999999999999999999999999999999999999999999999999999999999 99 1111 99999 00 6 555555 6 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 6 2 6 00000000000000000000000000000 444444444444444 99 00000 5 0000 5 5 5 00000000000000 5 111 5 0 2 6 99 6 0 4444444444444444 8 0 0 0 0 8 8 000 6 11 8 8 8 8 11111111111111111111111111111111 4 8 8 77 7777777777777777777777 33 0 2 2 77777777777777777777777777777777777777777777777777777777777777777 99 6 99 9 99 222 6 00 6 99 55 5555 99 6 5 99 5 5 77777 5 66 5 333333333333333333333 4 4 8 00 4 66 5 333333 777 777 4 44 4 4 333 4 6666666 4 777 9999999 66 66 4 4 000000 66 5 44444444 77777777777777777 2222222222222222222222222222222222222 5 999999 333 666 6 55 5 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 111 1 99 000 3 2 5555 555555555 55555555555555555 0 0 222222222222222222222 777777777777777777777777777777 6666666666 1 6666666666666666666666666666666666 8 8 444 0 666666 1111111 99 6 444444444444444444444444 6 6 3 6 11111111111111 6 0 6 8 555 0
lowQualScore : ............. . .. . ... . . ... . ....... .. .. .. . ... ................. . ... . . ......... . . .. . .............. .... . ......... ... ...................................... . ... . .. .. ... .. . . ... . . .. ................................................................................................. ..... . . .. . ... . . . . . .... . ..... . . . . . . . ...... . . .................................................................... .... ... ................. . . .. ..... . . ..... .. . . ............. . ... ................. .. ................................... ... . . . ............. ............... . . ....... . .. ...... ... ..... ..... ... . ........................... . . . .......................................................................................................... ... . ..... ....... .. .. . .. ................................... . . .... . . . ... .. . . . ... . . . ......... ... ............. . . . .......... . . . . .... . . . . . . .... ... .. .. .. . ... . . . . .......... ...................... . .. .. . ..... . .. .. .................................................................. . ...... .. . .. . ..... . .. .. . .............................. . . .. . . . ....... .......... . .. . . .. .. .................................................................... .. .... ..... .. . ...... . ...................................................................................................... . . . ............................. ............... .. ..... . .... . . . .............. . ... . . . . .. . . ................ . . . . . . . ... . .. . . . . ................................ . . . .. ...................... .. . . . ................................................................. .. . .. . .. ... . .. . .. .. .... .. . . .. . . ..... . .. . ..................... . . . .. . .. . ...... ... ... . .. . . ... . ....... . ... ....... .. .. . . ...... .. . ........ ................. ..................................... . ...... ... ... . .. . ........................................................................................................................................................ ... . .. ... . . .... ......... ................. . . ..................... .............................. .......... . .................................. . . ... . ...... ....... .. . ........................ . . . . .............. . . . . ... .
lowQualScore : 8888888888888 0 88 0 000 7 3 777 3 3333333 77 33 33 3 333 77777777777777777 3 777 7 3 777777777 0 3 00 5 55555555555555 8888 0 000000000 000 55555555555555555555555555555555555555 2 222 0 88 55 555 66 8 0 444 0 0 00 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 88888 5 0 88 0 555 5 0 0 0 2 2222 0 00000 0 0 0 0 0 5 0 222222 0 0 11111111111111111111111111111111111111111111111111111111111111111111 2222 888 55555555555555555 0 0 88 00000 0 5 22222 88 5 0 8888888888888 2 000 55555555555555555 22 88888888888888888888888888888888888 222 5 0 0 2222222222222 555555555555555 2 0 0000000 0 00 888888 000 88888 00000 000 0 222222222222222222222222222 2 0 0 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 000 2 55555 0000000 88 00 8 00 00000000000000000000000000000000000 0 8 8888 0 0 0 000 88 2 0 2 555 5 0 0 666666666 888 8888888888888 0 0 8 8888888888 5 0 0 5 4444 0 0 8 7 7 7 0000 777 00 22 99 0 333 6 7 4 7 6666666666 7777777777777777777777 7 33 22 8 22222 6 00 00 666666666666666666666666666666666666666666666666666666666666666666 0 000000 00 8 44 7 22222 7 88 55 7 444444444444444444444444444444 7 7 99 7 7 7 4444444 0000000000 7 99 4 7 66 99 33333333333333333333333333333333333333333333333333333333333333333333 22 7777 33333 33 7 888888 7 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 7 5 7 88888888888888888888888888888 333333333333333 22 00000 7 7777 7 7 7 66666666666666 7 444 7 9 5 7 77 7 3 0000000000000000 0 6 8 0 8 0 0 444 0 00 0 0 0 0 44444444444444444444444444444444 0 0 0 00 0000000000000000000000 88 0 5 0 44444444444444444444444444444444444444444444444444444444444444444 22 7 22 0 22 888 7 77 7 22 00 2222 22 7 7 33 7 0 55555 0 99 0 999999999999999999999 4 4 7 66 4 11 6 444444 888 888 4 44 4 4 999 4 2222222 4 888 2222222 11 11 4 4 000000 99 0 11111111 22222222222222222 5555555555555555555555555555555555555 0 444444 888 666 3 99 1 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 666 4 33 000 5 5 2222 888888888 55555555555555555 8 8 444444444444444444444 333333333333333333333333333333 2222222222 0 9999999999999999999999999999999999 0 0 222 8 888888 6666666 22 7 888888888888888888888888 7 7 3 7 99999999999999 7 8 7 0 222 7
consensus : CAGCCATTCTC---CC-G----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAAAGCAAA-A-TTT-GAA-GTAG--TGGAGTA-GGA--AACTGAAAAGT--AA-TAAATG---AAAGAAGG-A----CATG-TTGG--TGTACAT-AATTT--GAAAGTTTTCG-CCACA----C-C--TAGCGTA-GATTGAT-CACAATCATACACTGACGG-----AA-CCT---ATT--A-ATTACCCTGTT-ACG---------GAAC-A-TAG-C-CG-ACGCTGCTA---------------AG-----GACGACGTC--G-TTC--TTTAGTTTTN-GGNAGACATTGTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TG-----TCAAAAAGGC-TTA---------CATAC--AACGAT---AAC----AGGTATGCA-ACT-AGCGA--AATGT-TCAA-AGTATTATCTCCCGTTTTT-GTGA--AANTNNGTACAATTATTTCT-ACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTT-GTG-ATGG--TGT-AA-GTAA-CA-AG--G--AA-TAAA--TGGT-------------TACTNC---GTTT-------------------TTCAGAAAA-TG-A-CGCT-T-A-----GGTA---TAAG-C-ACT--CTG-T-T-GTT-ACGGA-AA--ATAGTTA-GTTCT-AGT-AT--G-AAA---CATTA-AATTTA-A-CCAT-----TTT---T-C---TTGTTT-CGT-----TGTCG-AA---ATC-GG-CA-AA---TCTTAATTG--TTGGAATA-ACAGAAA-TAGCGAAA----CA-TAAAAGGGANACAA----TTT---AAAA-AAA----G--TAANTT-TATCAA-A-G--AAA-AAGAGAAAA-TA--GTGAAAATTT--A--AAACTGAC-TAA-CAATTCAAC---C-----A--TGATAAC-NT-TT-AATAATTTTAA-CTTCA-TGTA-CA-TA-TA-TAT---GCAT-T-ATTTA-ACT--TGCCC-TTA--GTCT-------------GTAAA-TATG-ATGTGACTTG--TGTG---------CA-CT--ACACACCT--AAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATANAGGTTTG--ATCG-TTA-CGG--TAA-AC-GGGATG----TACA-GA-ACGGAAACA-TAGAATACA-CTTTG-T-AATCCCA-AGT---AA-TATTG-CTCAAGAGTAG---AGTTTATCTACAAAATGCTTCTCAATCCATTCTCT-N-T-CATTCGTC--TTTCAGGCTAT---CAA---ATGA-C-ACGAAACATT--T---A---AGAAAAATAGGTGTTTTT-CAGTGAAAA-A-CAGAA-AAGG-TTGGAAAAGAA-TATG-C-TTC-C--GT---AAC-AGTAAATNAAAATTTCCAATGCTATTCT--GGCAATTA-ATTTGA-TTTGT-A-TGCATTA--CTC-----TGACACAGA--CTCGT--AA-ATG------TAT-TTTT-AGA--TTCATA--A-AATAAA--TGTTCATA-TAT--T-G--TTAAAATT-NGCT-AGTATTT---TTTTCT---AANAAAAC-T-ATC---TTTC-CGTAACCGGGAT------TAT--GTCCAT--ATGACAAAAC---GTTTC-GT--GAA-CA-TCGC--------CTAA--A-AT--------G--G-AC-TTTG--TG-TCT-AAA-AAG---A-NTGT-A-TGTC---AA-ATTT--T-AT-TCAT-AAAGT--AG--TC-A-C--AATTGGCCAA---TT---A-A--A--TATT------------CTTT--TT--ACA--ATT--ATTTTAAAATAT----CACATT-ATAT-A------TACGAG-ATCAATA--------A--C----TN-AC---CT---AT-------------A-TC------TGCG-CCAT-A---------------AAATA-----------------AACCTCNA-CAGAGG--TTATTTT-TATCG-AT---GA--AA--GAAGGAAA--AT-AGT---G-T-TGG--CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTTC-AAT-T-CCGTTACGGA-ATN-TTGACG-TTAACGG---------A------GATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---T---TGAGATG-CAGTACCAAT--TATAACGTAA-T-GTTTA-ATAAAAA---CGTTGTATCTGGTGAGGTACA--G-GGTACCGCT-A-CCCT-C--A-----TGCGTTATGGAA----ATAT--------------A-------------TAT--GAAGAT-TTAAA--CATT--TTTGTT---GAAA-TGC-NA-CC--ACAA--TTTCTGATAG--AGAT--GTA-TC-AA-TTAAA-TT-TT----GTCAAGAA-T--T-TGCC-----AA-TCA-AATGACG-T-AAGAACCC--A-C--AGAATAAAAACCAAAAAT---TATTTACAT---A-GTTTTGGCA-C-TA---TA-GTGTG-A--A--TA-AAAAC---A--CGT-TAC--G--GA-AT-CAT------A--AC-ATGT----T---TAAGCGA-AG-AG-----G----CATTTT--AC--A---CAT--AAT--AA--TTC---ATT---AAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGTA---A----TATC-A-------ACAAA-----ACA-----TAT-A-----ATA----TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--------AT----------AA-AG--TTAG--ACAA--C------GCTAGAA-TTG-AAA-CACAGAACA---GACATTCCTAAATA-AAACA------ACACTGGCGACA-----------ATT-GGATTTTTATATATTTC-T-AC-AC----TT-TTGGAAAGAGTTATT--TT-AAGAAA-TAACAATAAAGATT--GCCTGGAAATTG-ACTG-TT--TTATGTT--TA-CGTT--ATACA-TCTAA------TTA--ACGTAG-TTGA-TACA---ATTACT---TTACGT---ACA-AACGCTT--TCAGGAATTC-A---GCA-TCT-CT-T-A---TTCCTTT-AC-TAGCGA-CATGAA----AT--TCT-ATA-TAAAGT-AACC-ATATACAAGGGAGAACG
Reference ( gi|3 ) : CAGCCATTCT----CC-G----C-AAA--GG-GTAAA-T-TAATTTTC-GAAAAAAATGCAAA-A-TTT-GAAAGTA---TGGAGT--GGA--AACTGAAAAGT--AA-TAAATG---AAAGAAGGTA----CATG-TTG---TGTACAT-AATTT--GAAAGTTT-CG-CCACA---AC-C--TAGCATA-GATTGAT-CACAATCATACACTGACGGCAAACAA-CCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A-TAA-T-CA-ATGCTGCTAGAGCGG----AAACCAGTACTCGACGACAT---G-TTC--TTTAGTTTTG-GAAAGACATTGTATTA-CAAGGGTTGAAAAA-CA-TG-GACAG-------------A-----TCAAAAAG---TT----------CATAC--AACGAT---AA-----AAGTATGCA-ACTCAGCGA--A--GC-TCAATAGTATTA-CTCTCGTTTTT-GTGA--AATTGT-TACAATT-TTTCT-ACT-TACTTCTTTTTCTCAAATGATTGAACT-AGTATC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTTCGTG-ATGG--TGT-AA-GTAA-CA-GG-----AG-TAAA--TG---------------TACTGT---GTTT-------------------TTCAGATA--TG-A-CGCT-T-A-----GGTA---TAAG-C-ACT--CTG-T-T-GTT-ACGGAGAA--ATAGTTAAGTTCT-AGTCAT--G-AA----CATTACAATTTA-A-CCAT-----TTT---T-C---TTGTTT-CGT----ATGT---GA---ATC-GC-CA-A----TCT-AATTG--TTGGAATACACAGAAA-TAA--AA-----CA-TAAAAGGAACACAC----TTT---AGAA-AAA----G--TAATTTATATCAA-A-G--AAA-A-GAGAAAA-TAG-GTGAAAATTT--A--AAACTGACTTAA-CAATTCAA----C-----A--TAATAA--A--T--AATAATTTTAA-CTTCA-TGT--CA-TA-T--TAT---GCAT-T-ATTAACACT--TGTCC-TTA--GTCTA------------GTAAC-TATGCATGTGACTT---TGTG---------CA-CT--ACACACCCTAAAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATAAAGGTTTG--ATCGATTAACGG--TAA-AC-GG--TG----TACA-GA-ACGGAAACA-CAGAAT-CA-CTTTG-T-AATCCCA-AGT---AA-TATTG-CTCAAGAGTAG---AGTTTATCTACAAAATGCTT-TCAGTCCATT-TCT-A-T-CATTCGTC--TTTCAAGAT-T---CAAC--ATGA-C-ACGAAACATT--T---A---AGAAAAATAGGTGCTTTT-CAGTGAAAG-A-CAGAA-AAGG-TTGGTAAAGAA-TATG-C-TTC-C--GT---AACCAGTAAAATAAAATTTCCAATGCTATTCT--GTCAATTACATTTGA-TTTGT-A-TGCATTA--TCT-----TGACACAG---CTCG---GA-ATG------TAT-TTTTAAGA--TTCATA--A-CATAAA--TGTTCATACTAA--T-G--TTAATATT-GGCT-ATTATTT---TTTTTT---AATA-----T-ATC---TTTCGCGTAACCGGGAT------TAT--GTCCATCAATGACAAAAC---GTTTC-GT--GA--CA-TCGC--------CTAA--A-AT--------G--G-AC-TTTG--TG-TCT-AAA-AAG---A-ATGT-A-TAT----AA-ATTT--T-AT-TCAT-AAAGT--AG--T--A-C--AATTGGGCA----TT---A-A--A--TATT------------CTTT--TT--ACAG-ATT--ATTTTAAAATAT----CACATCTATAT-A------TACGAG-ATCAATA--------A--C----TA-AC---CT---AT-------------A-TC------TGCG-CAAT-C---------------AAAT------------------AACTTTCA-CAGAGG-TTTATTTTATATCG-AT---GACCAAA-GAAGGAAA--A--AGT---GTT-TGG--CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTT---AAT-TCCCATTACGGA-ATGTTTGACG-TTAGCGG---------A------GATT-ATTTTTAATAGACTCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---T---CGA-ATG-CAGTAACAAT--CATAACGT-A-T-GTTT--ATAAA-----CGTTGTATC---TGAACTACA--G-GGTGCTGCT-----------------TGCGTT-TGGAA----AT-T--------------A-------------TAT--GAAGAT-TTAAA--CACT--TTTGTT--TGAAA-TGC-TA-CC--ACAAATTTTCTGAT-G--AGAT--GTA-TC-A--TTAAA-TT-T-----GTCAAGAA-T--T-TGCC-----AACTCACAATGA-G-T-AAGAAACC--A-C--AGAATGAAAACCAAGAAT---TATTTACAT---A-GTTTTGGCA-C-TA---TA-GTGTG-A--A--TA-AAAAC---AC-CGT-GAC--G--GA-AT-CAT-----GA--AC-ATGT----T---TAAGCGA-AG-AG-----G----CATTTT--A---A---CAT--AAC--AA--TTC---ATT---AAT-TCC------TTG---TTGGGA-C-TGGTTT-TCACTCGTAAGT----A----TATC-A-------ACAAA-----AC------TAT-A-----ATA----TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--------AT----------AA-A---TT-G--ACAA--C------GCTAGAA-TTG-AA--CACAGAACA---GACATTCCTAAATACAAACA------AC-CTGGCGATAAAAAAAAAAAAATTGGGATTTTTATATATTTT-T-TC-A-----TT-TCG--AAGAGTTATT--TT-ACGAAA-TACTAACTAAGATT--GCCTGGAAATTGAACTGTTT--TTATGTT--TAGCGTTAAATACACTCTAA------TTA--ACGTAG-TTGA-TACA--GATTTCT---TTACAT---AAC-AACGCTT--TCAGGAATTC-ATC-GCATTCT-C--T-A---TTCTTTT-AC-T-GCGA-CATGAA----AT-GTCTAATA-TACAGT-AACC-ATATACAAGGGGGAATGA
gi|4 : CAGCCATTC-----CC-G----C-AAA--GG-GTAAA-T-TAATTTTC-GAAAAAAAAGCAAATA-TTT-GAA-GTA---TGGAGG--GGATAAACTGAAAAGT--AA-TTAATG---AAAGAAGG-A-----ATG-TTGGTGTGTACAT-AATT---GAAAGTTT-TGTCCACA----C-A--TAGCATA-GATTGAT--ACAATCATACACTGACGGCAAACAAACCTCCTATT--A-ATTACCCTGTTCACG---------GAACTA-TAAGTACA-ATGCTGCTA---------------AG-----GACGACTG---G-TTC--TTTGTTTTTG-GAA-GACAT-GTATTAACAAGG-TTGAAAAA-CAATT-GACAG-------------------TCAAAAAGG--TTA---------CATAC--AACGAT---AA-----A-GTATGCA--CT-AGCGA--A--ATGTCAA-AGTATTA--TCTC-CTTTT-GTGA--AATTTG-TACAATTATTTCT-ACT-TACT-CTTTTTCTCAAATGATTAA--T-AGT-TC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTT-GTG-ATGGCTTG--AA-GTAA-CAAGG-----AGATAAA--TG----------------ACTGG---GTTT-------------------T-CAGATAA-TGGA-CGCT-T-A-----GGTA-----AG-CCACT--CTG-T-TCGTT-A-GGA-AA--ATAGTTA-GTTCT-AGTACT--GCAA----CATTACATTTAA-A-CCAT-----TTTATTT-C---TTGTTT-CGT-----TGTTG-AA---ATC-GG-CA-AA---TCTTAATT---TTGGAATA-ACAGAAA-TAA--AAA----CAATAAAAGAGA-ACAA----TTT---AAGA-AAA----G--TAATTT-TATCAATA-G--AAA-AAGAGAAAA-T---GTGAAAATTT--ATAAAACTGA--TAA-CAATTCAA----C-----ACATAATAAC-A--TT-AATAATTT-AA-CTTCA-TGTAGCA-TA-T--T-T---GCATGT-ATTA---CT--TGTCCATTA--GTCT--------------TAGC-TAAATATGT-ACTT----GT----------CA-CT--ACACACC---AAAGAT--A--TATAAGGA--TC--AGAG--CATATAAAGGTTTG--ATCG-TT--CGG--TAA-AC-AGGATG----TACATGA-ACGGAAACA-CAGAAT-CA-CTTTG-T-AATCCCA-AGT---A--TATTG-CTCAAGAGTAG---AGTTTATCTACAAAATGCTTCTCAGTCCATTCTCT-A-T-CATTCGTC--TTTCAAA---T---CAA---ATGA-C-ACGAAACATT------A---AGAAAAATAGGTG-TTTT-CAGTGAAAATA-CAGAATAAGG-TTGGAAACGAA-TATG-C-T-C-C--GT---AAC-AGTAAAAAAAAAGTTCCAATGCTATTCT--GGCAATTA-ATTGCA-TT-GT-AGTGCATTA--CTC-----TGACACAG---CTCGT--GA-ATG------TAT-TAT--AGA--TTCATA--AATATAAA--TGT-CATA-TAT--T-G--TTAAT-TT-GGCT--TTATTT---TTTTTT---AATA-----T-AT-----TTC-CGTAAC-GGGAT------TAT--GTC-AT--ATGACAAA-C---GTTTC-GT--GA--CACTTGC---------TAA--A-ATC-------G--G-ACCTTTG--TG-TCTTAAA-AAG---A-TTGT---TAT----AA-ATTT--T-AT-TCAT-AAAGT--AG--TT-A-C--AATTG--CAA---TT---A-A--AATTATT------------CTTT------ACA---TT--ATTTTAAA-TAT----CACATC-ATAT-A------TACGAG-AT-AATA--------AACT----TA-AC---CT---AT-------------A-TC------TGCG-CCAT-A---------------ACAT------------------AAACTTCA-CAGAGGGTTTATTTTATAT-G-AT---AAC-----GAAGGAAA--AT-AGT---GTTCTTG--CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTT-----A-GG-T-CCTATCGGACTTTTC-AAT-T-CCATTACGGA-ATG-TTGACG-TAAGCGG---------A------GATT-ATTTTTAATAGACTCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAACCATC-T----A---T---CGA-ATG-CAGTAACAATCCCGTAACG
gi|2 : CAGCCATTCT----CCCG----C-AAA--AGAGTAAA-T-TAATTTTCAGAAAAAAAAGCAAA-AGTTT-GAA-GTAA--TGGAGTAGGGA--AACTGAAAAGT--AAATAAATG---AAAAAAGACAGGACCATC-TTG---TTAACAT-CATTT--GAAAGTTTTCG-CCACA---CCAC--TAG-GTAAGATTAATGCACAATCATACA-TGACGG-----AA-CCT---ATTCAACATTACCCTGTT-ACG---------GAAC-AATAC-T-TGTACATTG-TAGGATGGCTTTAAG---GT------CGACATCG-G-CTC--TTTAGTTTTATGGAAGACAT-GTATTA-CAAGGGTTTGAAAA-CA-TT-GACAGTTTTAAAT-----ACGTTTTCAAAAAGACACT----------GATACCCATAGAT---AATT---AAATGTACATAGTATACGATAA--GT---AA-AATGTTA-TTTCCGTTTTTTGTGA--AAATGTGTACAATT-TTTATCACTGTACTTCTTTTTCTCATATTATTGAAAT-AGT-TC--A--ATAT-CAGAGTTAAAAACAT-TTTGAT-GTC-ATTTTTGG-ATGT--TTT-AAAGTAAACA-AGGAA--AA-TAAA--TGGTAAGGGTTTTCAGATAATAC---GATT-------------------ATCAGAAA--TG-G-CGCTAT-A-----GGTT---TAAG-C-ACT--CTG-TCT-CGT-ACGGAAAATAATATTC---TTCT-AGT-ATCGA-AA----CATTAGAATTTAGA-CCAT-----TAT---T-TGTATTGTT--CGT-----TGTCTGAA---ATCTGC-AACA----TCTTAATTGGCTTG-AATA-ACAGAAA-TAGCGAA-----CA-TAAAGAGAACA-A------TT---AGAA-AAA----G--TAAATT-TATCAA-A-AGAAAA-A-GAGAAAT-T---GTGAAAATTT--A--AAACTGACTAAACCAATTCAA----CCATAGA--TGATAACCAT-T--AATAATTTTAA-CTTCA-AATA-CATTA-TA-TAT---GCAT-T-AATTACA----TGCCC-TTAATGTCTT------------GTAAA-TATG-ATG-GACTTGGGTGTGGTGTTGTGCCA-CTA-ACAAACCT--AAAGAT--A--TAT-AGAA-CTCATAGA--GCATATACAGGTTTGAAATCG-TT-ACGG--AAA-ACAGA--TG----T-----T-ACGGAAACATTAG-------CTTTG-TGAATCCCACAGTAAAAA-TATTGCCTCAAG-GTAG---AGTTTGTCTACAAAATGCTTCTCAATCCATTCTCT---T-CA-TCGTC---TTCAGGCTAT---CAA---ATGAGCGATGAAA-ACT--GGGAG---AGAAAAATA--TGTTTTT-CA-TGAAA--A-CAGAA-AAGG-TTGG--AAGAA-TATGCC-TTC-C--GT---AA-CAGTAAATAAAAATTTTC-ATGGCA-TCT--GGCAATTA-ATTCGAGTTTGT-A-TGCATTAACTCTAGAGCTGAT-CAGACTCTCG---TACATGTAAAATTAT-TTTT-AGA--CTC-TA--AGAAGAAA--TG-TCATA-TAGTTT-G--TTAA-ATT-TGGT-G-TA------TTTCCT---AAAA-----A-ATCTATTTTC-CGTAA-CGGGAT------TAT--GCCC--TAATGACAAACA---GTTTCTGT--GA--CA-TCG---------CTAA--ATAC--------G--GAAC-TTTG--TG-TCT-AAA-AAA---G-ACGTCA-TGTCA--AA-ATTTGAT-ATCTCAT-AAAGT--AGATC--ACC--AATTGCCAA----TTTA-A-A--A--TATA------------A--T--TT--AC---ATT--ATTTT-TAATAA----CAC----ATAT-A------TACGAG-ATCAATA--------A--C----TT-GC---CT---GT-------------ATTC------TGT--CAAT-CAGATTATGCGGCCATAAAT------------------AAACTCAA-CAGAGG--CTATT---CATCGAAT---GAATA----AAGGAAA--ATTAGT---G-T-TGG--CAG-----AAA-CTATT--C-TGTT-TG-A--GAGGTGT---ACGG-TGCCTATCGGACTTTTCAAAT-T-CCATTAC-GA-ATTATTGACG-TTA-CGGTATATAGT-A------GGTT-A-TTTTAATAGA-TCAACAA-CTTTCA-AA--TAA-TT--TACGA-GACAT-CCGGTGAA-CATT-TAATGA---T---TGACATG-GAGTACCA----TATAACGTAA-T-GTTTA-AAAAA-----CG-TGTATC---TG---TACAGCG-GGTACTGCTAATCTCTACAAA-----TGCGTTATGGAA----ACAT--------------AGTCTAAACAAGAGTATTGGAAGAT-TTAAA--CATT--TTTGTTGATGAAA-TGCTTA-CC--ACAA--TTTCTGATAG--CGAT--GTA-TC-AATTTAAA-TTGT-----GTCAAGAA-T--TATG-C-----AA-TCA-AATGACGTT-AAGAACCC--C-A--AGAATTAAAAC--AAAATTAATATATACAT---A-GTTTT-GCA-C-TA---TA-GCGTG-----------AAAT---A---------------A-AT-CAT------A--AC-ATGT----T---TAAGCG--AC-AG-----G----CATTTT--C---G---CATCCCAT--AAATTTC---A-T---GAT-TCC------TTG---TTGGAG-C-TATTTT-CCA-TCGTAAGTTAAAA----TATCAA-------ACAAA-----ACATGGTTTAT-AC----ATA----TTATG-----AAAAAA--------AAG-----CCG---TT------C-T--------AT----------AA-AAAGTTAG--ACGACCC------GCTAG-A-TTG-AAACCACAGAACA---GACATT-CTAAAT---AACA---------CTGGC------------AGCATT-GGATGTTTG-ATGTTTC-T-AC-AC----TT-TGG--AAGAGTTA-A--TT-AAGAAA-TAACAATAAAGA-T--GCCTGGAAATTG-GCTG--T--TTATGTT----AC-TT---TACATCTTAA------TT---ACGTAGATTGAGTACC--AA-TACT---TTACAT---ACA-AACGTTT--TCAGGAATTC-A---GCA-TCT-CT-T-A---TTTCTTT-AC-TAGCGACCATGAATTCTAT-ATC--ATATTACAGA-AA
gi|9 : CAGCCATTCTC---CC-G----CAAAA--GG-GTAAA-T-gtg
gi|1 : AGCCATTCTTCTCCC-GAAAAC-AAAAAGG-GTAAAATGTAATTTTCAGAAAAACCCGCAAA-A-TTTCGAAAGTGGATTGGAGTA-GGA--AACTGAAAAGTTAAA-TAAATGGAAAAAGAAAGGA----CATGATTGA--TGTACATTAATTTTTGAAAGTTTTCG-CCACATATAC-CACTAGTATA-GATTGAT-CACAATCATATACTGACGG-----AA-CCT---ATT--A-ATTACCCTGTT-ACGCCAGCGGGGGAAC-A-TAG-C----ATGCT-CTA---------------AG-----GACGACATTTGG-TTCCTTTTAGTTTTT-GGTAGACAT-GTA--A-CAAGG--TGAAAAAACA-TTCGACAGTTTTAGATACGCTG-----TCAAAAAGGC-TTACAGTATATGCATAG--AATGTTTTTAACGGATAGGTATGCA-ACT--ACGA--AATGT-TCAA-AGTATTATCTC-CGTTTTT-TTGATGAAATGTGTA-AATTATTTCT-ACT-TACTTCTTTTTCTCAAATGATTGAAATCAGT-TCGTAGAATATGCAGAGC-AAAAACATGTTTGATTGTCCATTT-GTGCATGG--TGTTAA-GTAA-CA-AGTCGAAAA-TAAACCTGGT-------------TACTTTCTGGTTTAAAAAGATGAGTAGCGACTTTCAGAAAAGTG-AACGCT-T-AAACTTGATAGGTTAAGTC-ACTTTCTG-T-T-GTTTACGGA--A--ATAGGTATGTACTCAGT-AT--G-AAACGACCTTA-AATCTA-AACCATAAATTTTT---T-C---TTGTTTTCGTCCTTGTTT---GATATATC-GGGCA-AAATTTTT-CATTG--TTGGAATA-ACAGAAAATAG--AAAAGAACA-TAAAAAGAAGAAACAATATTTCCAATAACAAA----GGTTAATTTA-GTCAA-AAG--AAATA-GAGAAAAATAGTGTCGAAATTTCTA--AAACTG---TAA-CAATTTAAAATCC-----A--TGATAA--C--TTTAATAATTTTAAACTTCAATGTG-CA-TAATAATATTCGGCAT-TTATTTAAACTGGTGCCC-CCG--GTCTAAATAAGTCTTCAGTAAAATATGATTGTGACTTGTTTTTG---------CATCTTAACACACTCTAAA-GATTGA--TATA--GATCTC-TAAAGAGCATATACAG--TTG--ATTG-TTA-CGGAATAACAT-GGAATGATTTTACG-GA-A----AACA-TAGAATACA-CTTTGAT-AAATCCA-ATA---AA-TAT-G-CTCAAGAGTAATAAAGTTTAT--ATCAAATGCTTCTCAATTCATT-TCT-C-TTCAT-CGTCCTTTTCAGGCT-TAGTCAA---ATGA-C-ATGAAGAATTGTT---AGAGAAAAAAATAGGTGTTTTTTCAGTGAAAA-CTCAGAA-AAGGGTTGGAAGAGAAATATG-CATTCGC--GTGAAAAC--GTAAATCAAAATTTCCAATTATATTCT--GGCAATTGAATT-GA-TTTTCCA-TGCATTA--CTC-----TAACACAG---TACGCGTAA-ATA-------ATATTTTAAGA--TTCATACAA-AAGAAAATTGT-CATAGTAT--TTG--TTAAAATTTGACTGAGTATTTCCTTTTTCT---AAAAAAAC-TGATC---ATTCACGTAAC-GTGAT------TATAAGTCCAT--ATAACAAAACTTTGTTCT-GTA-GAATCA-TCGCTATATATCCTTA--A-ATATTTTCTCG--G-AC-TTTG--TG-TCT-ACA-AAG---A-TTGCAA-TGTC---AA-ATTT--TAAT-TCAT--AAGT--AG--TTCA-CAGAATTGGCGA----TTATAA-A--A--TA-G------------CTTTGGTT--TTAGCATT--ATTTGAATATA-----AACAGTCATAT-AC-----TACGAG-ATCAATA--------T--C----TGTACATGTT---ATCTTGTCA------A-TCAGATTATGCG-CCAT-A---------------AAACA-----------------AACTTCAA-CATGGG--CTATTGT-TATCG-AT---G---AAT-GAAGGAAAATA--AGT---G-T-TGG--CAGA----AAA-CTAAT----TG-C-TGCG--TTTTTGTAAAA-GGTTGCCTATCGGACTTTTCAGATGTCCAGTTACTGA-ATTATTGACG-TTTACGGCTGATATATA------GATTAATTTTTAATATA-TC-AC-A-CTTTCACAAT-TAGTTTTGTACGAGGGCAT-CCGGTGAG-CATG-T----AGTGT---TGAGATGACGGT--C-AT--CATAACGTAA-T-GTTTAGATAAAAAAATCGGTG-ATCTGGTGAAGTACA--GTGGTACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaactgacggaacctattaattaccctgttacggaacatagcatgctctaaggacgacgtggttctttagtttttggtagacatgtattacaagggtgaaaaacattgacagttttagatacgttgtcaaaaagttaaatatatccatagatgattaaatgttttacgataaagtatgc
gi|9 : ACTGACGG-----AA-CCT---ATT--A-ATTACCCTGTT-ACG---------GAAC-A-TAG-C----ATGCT-CTA---------------AG-----GACGACGT---GGTTC--TTTAGTTTTT-GGTAGACA-TGTATTA-CAAGGG-TGAAAAA-CA-TT-GACAGTTTTAGATACGTTG-----TCAAAAAG---TT----------ctcgggtggctatttgttgctcctgggaacaaatggctgctttttggaaaacatacgttcctttaatacaagacatggaagttttaaaaacattgatttgttgaaactgctaaccgtacaatttctaatagaagatgtaatcaattaaattttgtcaaaaatttgcaaaatcaaattgatgttaagagacccacagaatagataacaaaaattatttacatcccagcatttgcagctaaactagtgtgaagataaaaacacgttaaggaatcagcaacaatgttaataagcgtccaggtttccattttacagcccataaatttcataatctccttgattttgggagttgattttcattcgtaagtacatatcaaacaaacaccatccatactagttatcgaaaagaagagaatcaggcgcgtttctaaataaagatagagtaagaacagggcggctagatctgaaaatacagagatggagaccaacacttggggcctggcgacatctggatgttatatatttctacactgttggaaagagttatttaaagaaagtaacaataaagatg
gi|14 : cagccattctcccgcaaaagggtaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaTGTATTA-CAAGGGT-GAAAAA-CA-TT-GACAG-------------------TCAAAAAG---TTA---------CATAC--AACGAT---AA-----A-GTATGCA-ACT-AGCGA--AATGT-TCAA-AGTATTATCTC-CGTTTTT-GTGA--AATTTG-TACAATTATTTCT-ACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTT-GTG-ATGG--TGT-AA-GTAA-CA-AG-----aaatatatccatagatgattaaatgttttacgataaagtatgc
gi|11 : aT-------------------TTCAGAAA--TG-A-CGCT-TTA-----GGT----TAAG-C-ACT--CTGGT-T-GTT-ACGGA-AA--ATAGTTT-GTT-T-AGT-AT--G-AAA---CATTA-AATTTA-A-CCGT-----TTT---TTC---TTGTTT-CGT-----TGTTG-AA---ATC-GG-CA-AA---TCTTAATTG--TTGGAATA-ACAGAAA-TAGCGAA------A-TAAAAGAGAAACAA----TAA---AAAA-AAAAAAAG--TAAATT-TATCAA-A-G--AAA-AAGAGAAAA-AAT-GTGAAAATTT--A--AAACTGAC-TAA-CAATTCGAC---C-----A--TGCTAA--CTTT--AATAATTTTAA-CTTCA-TGTA-CA-Tg
gi|7 : atggcactggttttcagataatacgaAAAATTT--A--AAACTGAC-TAA-CAATTCAAC---C-----A--TA
gi|21 : CACACCT--AAAGAT--AACTATAACG----C-TAGAG--CTTAAATAGGCTTG--ACCG-TTA-TGG--AAA-AC-AG---------AAA-GTTACGGAAATA-TAGGGT-AAACTTTG-T-AATCCCA-AGT---AA-nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctagagcatataaaggtttgatcgttacggtaaacaggatgtacataacggaaacacagaatacactttgtaatcccaagtaaatattgctcaagagtagagtttatctacaaaatgcttctcagtccatttctcatcatcgtctttcaagatatcaaatgacacgaaacatttaagaaaaataggtgttttcagtgaaaacagaaaaggttggaaagaatatgcttccgtaacagtaaataaaaatttccaatgctattctggcaattaattgatttgtatgcattactctgacacagactcgtgaatgtattttagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggactttgtgtctaaaaagatgtaatatcaaattttattcataaagtagtcacaattggcaatttaaaatattctttttacattattttaatatcacatcatatatacgagatcaataactaacctatatctgcgccataaataaacttcaacagaggttattttatcgatgaaagaaggaaaatagtgttggcagaaactattctgctgattttttaggtgcctatcggacttttcaattccattacggaatgttgacgttacggga
gi|7 : TC-TAGAG--CATATAAAGGTTTG--ATCG-TTA-CGG--TAA-AC-AGGATG----TACA-TA-ACGGAAACA-CAGAATACA-CTTTG-T-AATCCCA-AGT---AAATATTG-CTCAAGAGTAG---AGTTTATCTACAAAATGCTTCTCAGTCCATT-TCTCA-T-CA-TCGTC--TTTCAAGATAT---CAA---ATGA-C-ACGAAACATT--T---A---AGAAAAATAGGTG-TTTT-CAGTGAAA--A-CAGAA-AAGG-TTGG-AAAGAA-TATG-C-TTC-C--GT---AA-CAGTAAATAAAAATTTCCAATGCTATTCT--GGCAATTA-A-TTGA-TTTGT-A-TGCATTA--CTC-----TGACACAGA--CTCGT--GA-ATG------TAT-TTT--AGA--Ta
gi|24 : aaaatttaaaactgactaacaattcaaccatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTTCTCAATCCATT-TCT-CTT-CA-TCATC--TTTTAGGCT------AACAAATGA-C-ATGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggactttgtgtctaaaaagatgtaatatcaaattttattcataaagtagtcacaattggcaatttaaaatattctttttacattattttaatatcacatcatatatacgagatcaataactaacctatatctgcgccataaataaacttcaacagaggttattttatcgatgaaagaaggaaaatagtgttggcagaaactattctgctgattttttaggtgcctatcggacttttcaattccattacggaatgttgacgttacggga
gi|18 : AA-A-CAGAA-AAGC-TTGG-AAAGAA-TATG-C-TTC-G--GT---AAC-AGTAAATCAAAATTTCCAATGCTATTTG--GACAATTA-A-TTGA-TTTGT-A-AGCATTA--CTC-----TATCACAGA--CTCAT--AA-ATA------TAT-TTTtgttttcagtgaaaacagtac
gi|5 : AGAA-TATG-C-TTT-CCTGT---AAC-AGTAAATCAAAATTTCCAATGCTATTCTCGGCCATTTA-A-TTGA-TTTGTAA-GGCATTA--CTC-----TAACACAGA--CTCAT--AA-ATAC-----TAT-TTTC-AGACCTTCATA--A-AATAAA--AG-TCATA-TAT--T-GCTTTCAAATT-TGC--AGTATTT---CCTTTTTAAAATAAAACTT-ATC---TTTC-CGTAACCGGGAT------TAT--GTCCAT--ATGAC-AAAC---GTTTC-GTTCAA--CA-TCGC--------TTAATCA-AC--------C--G-AC-TTTGGCTG-TCT-AAACAAGCATA-CTGA-A-GTC----AACATTT--T-AT-TCATCCAAGA--AG--TC-A-C---ATT-GGCAAAATTT---A-AACA--TATTCGTCTTATACTACTTT--TTTGACA--ATC--ATTTACAAATATACGATGCATTAACCTGA------TACAAGTATCAATAAAT-----A--CAATATA-AC---CTTGCATTTTCGTTCAATGGA-TA------TGCGCCCAT-A---------------AAATAA----------------AAC-TTCA-AAGAGG-----CTTTAT-CCG-AT---GAT--AT-GAAGGCAA--AT-AGT---G---TGG---AG-----AAACCTATT--CTTG-CTTG-ATTTTTTTTT---A-GG-TGCCTATCAGACTTTTC-AAT-T-CCGTTACGGATCTATTACACGCTTAACGGATATAT---A------GATT-A--TTTAATAGA-TCAAC-ACCTTTCACAA--AAAATC--TACGA-GGCATACCGCTGAA-CATCAT----G---T---TGAGATG--AGTACCA----TATAACGTAA-TGGTTT--ATAAA-----ag
gi|20 : AAAATTTCCAATGCTATTCT--GGCAATTGG--TTGA-TTTGT-A-TGCATTA--CTC-----TGACACAGA--CTCGT--AA-ATA------TAT-TTT--AGA--TTCATA--A-AATAAA--TG-TCATAaaacgctgataaaatctggtgaggacaggcgtaccaactctaatatttctctataaatgcgctatgagtaaacaatagttctttatatatcaaatacatatgaagatactaaacatttttgttgaaatgcaaccacaattctgatagagattagtacaattaaatttttgttgtcagttatagttgtccaatcaactgactgttaatgatatgccctatcagaattaaaacaaataattatttacataagttgtgactatacgtttaaagttagaaaccacacacgttgacgttgacatacatatgagggacatgtggtttttagcgacagtaggaccattttatctacctaatctaattccatttctattggttggagcagatttatcatcgtaagtaatattattatcaaataaggacatatactagtgtatgaaaaacggactgaccgttgtcgtattataatgttataagaacgctagattgaaacacagaacatcaaacgatcctagaataaacaacactggcgacattggattttttatatatttttctctactactttttggaaagagttattgattaatgaaatacaatagattcatcatgataattgttctacatggttgagtttgtagcgttgttgactttgacatcatttattacgtagttgatacaattacttagttacgttcaaatgaacattcggtcagatgttcagagcatctcattaattttcttttgactagcaatatgagatcgtttatataaagtaactgatattagcagatagaatggtgt
gi|23 : -----T-AT----TTTC-CGTAAC-GGGATGACATGTAT--GTCCAT--ATGACAGA-C---GTTTC-GT--GAG-CA-TCG---------CTAA--T-AT--------tatttgtta
gi|19 : aataaaagtATGA-GAAAC---GTTAA-GT--GAA-CA-TCAC---------TAA--T-AT--------ACCG-AC-TTTG--TG-TAT-AAA-TA----A-ATGT-AATGT----CA-ATTT--TCAC-TCAT-AATGT--AG--TC-G-C--AATTGG-CAAT--TT---A-AG-A--TATT------------CTTT--TT--ACAac
gi|7 : t--------G--G-AC-TTTG--TG-TCT-AAA-AAG---A--TGT-AATATC---AA-ATTT--T-AT-TCAT-AAAGT--AG--TC-A-C--AATTGGCAA----TTTA-A-A--A--TATT------------CTTT--TT--ACA---TT--ATTTTAA--TAT----CACATC-ATAT-A------TACGAG-ATCAATA--------A--C----TA-AC---CT---AT-------------A-TC------TGCG-CCAT-----------------AAATA-----------------AACTTCAA-CAGAGG--TTATTT--TATCG-AT---G---AAA-GAAGGAAA--AT-AGT---G-T-TGG--CAG-----AAA-CTATT--C-TG-C-TG-A---TTTTTT---A-GG-TGCCTATCGGACTTTTC-AAT-T-CCATTACGGA-ATG-TTGACG-TTA-CGG---------
gi|6 : aaaatttaaaactgactaacaattcaaccatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctagagcatataaaggtttgatcgttacggtaaacaggatgtacataacggaaacacagaatacactttgtaatcccaagtaaatattgctcaagagtagagtttatctacaaaatgcttctcagtccatttctcatcatcgtctttcaagatatcaaatgacacgaaacatttaagaaaaataggtgttttcagtgaaaacagaaaaggttggaaagaatatgcttccgtaacagtaaataaaaatttccaatgctattctggcaattaattgatttgtatgcattactctgacacagactcgtgaatgtattttagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnG--TGATCT-ATA-TAA---ATATGT-A--ATGAGCAA-ATTT--T-AC-TCAT-CAAGTGAAG--TC-A-CG-AATTGAGCAAT--TT---AGA--A--TATTTTCTTAGG----CCTT--TT--ACAT-TTTTGATTTTGAACTATGTT-CACATTTACAT-AAAATAACACAAG-ATCAATATAGATACGA--C----TT-AC---CT---GC-------------AGTC------TGTC-CAATTC---------------AGATTATGCGACAGTTACAATAAACCTTCAACAGAGG-CT-ATTTT-TATCG-ATAATGGTCATATGAAGGATAT-A--AATTTGGTTGTGGGTCAGTTTATGGA-TTATTTCC-TC-C-TG-A--AATCTT------AG-TGCCTATCAGACTTTTTCAAT-TTCCGTTACG---ATAT--AACG-TTA-CGG---------ATATATAGATT-ATTTT-AATAGA-TCAAC-A-CTTTTACAACAAAATCT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TGATTGA-ATG--AGTA-CA----TATAACGT-A-T-GTTTT-ATAAAAA---CGT-GTATCTGGTGAG--ACA--G-G-TACCGCCTAATCTTCTCTATAAAATGCGTTATGGAACATAGT-TCCTTTAAACAAGACA-------------TAT--GAAGAT-TTAAA--CA-T--TTTGTT----AAA-TGC-AA-CC--ACAA--TTTCTGATAG--AGAT--GTA-TC-A--ATAAA-TT-T-----GTCAAGAATT--T-TTCC-----AAATCA-AATGACG-T-AAGAACCC--A-CCAGGAATAAAAAC--AAAAT---TATTTACAT---A-GTGGTTGCA-CTTATT-TA-GTGTG-A--ATCTACGAGAG---AA-CGT-TACCTG--GA-AT-TCT-----TATCAC-ATGTGG--TGTGTGAGCG--AG-AGCGCGCG----CATTTT------A---CAA--GCC--AAC-TTCAAAATTCCAAAT-TCTCTTTGATTG---TGGGTAGCATGTCTT-TCA-TCGT-AGTTTAAA----TATC-ATATTCTTACCA--------------TGT-AGATTTGTA----TTATGAGTTAAAAAAA--------CA-------CGAT-TT------CTT--------ATACTTATATCAAA-G---TTAG--AC-A--C------GCTAGGATTTA-AA--CACAGAACA---TATATga
gi|28 : tgatgtaattagtagtccaaaatctatttttcgtaacgggattattgttccatagttagtactcgagaatattcgtgtgtcaagcttagcgaacctaatacgcttttgtttaactaggtcagagaactctctatgtgaAG-----AAA-CTATT--C-TG-C-TG-A---TTTTTA---A-GG-TGCCTATCGGACTTTTC-AAT-TCa
gi|8 : ATAACGT-AAT-GTTT--ATAAAAA---CGT-GTATC---TGAGATACA--G-GGTGCTGCT-----------------TGCGTTATGGAA----A--T--------------A-------------TAT--GAAGAT-TTAAA--CACT--TTTG-T--TGAAA-TGC-TA-CC--ACAA--TTTCTGATAG--AGAT--GTA-TCAA--TTAAATTT-T-----GTCAAGAA-T--T-TG-C-----AA-TCA-AATGACG-T-AAGAAACC--A-C--AGAAT-AAAAC--AAAAT---TATTTACAT---A-GTTTT-GCA-C-TA---TA-GTGTGAA--A--TA-AAAAC---A--CGT-GAC--G--GA-AT-CAT------A--AC-ATGT----T---TAAGCG--AG-AG-----GC---CATTTT--AC--AC--CAT--A----AA--TTC---A-T---AAT-TCC------TTG---TTGGGAGC-TGGTTT-TCA-TCGTAAGTA---A----TATC-A-------ACAAA-----ACA-----TAT-A-----ATA----TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--------AT----------AA-AG--TTAG--AC-A--C------GCTAG-A-TTGAAA--CACAGAACA---GACATTCCTAAAT--AAACA------ACACTGGCGAC------------ATT-GGATTTTTATATATTTTCT-TC-AC----TT-TCGA-AAGAGTTA-T--TT-AAGAAA-TAACAATAAAGA-T--GCCTGGAAATTG-ACTG-TT--TTATGTT--TA-CGTTAAATACA-TCTAA------TT---ACGTAG-TTGA-TACA---ATTACT---TTACAT---ACA-AACGCTT--TCAGGAATTC-A---GCA-TCT-CT-T-A---TTC-TTT-AC-TAGCGA-CATG-A----AT--TCT-ATA-TAAAGT-AACC-ATATAC-AGGGGGAATG
gi|5 : AA----ATAC--------------A-------------TAT--GAAGATACTAAA--CATT--TTTGTT---GAAA-TGC-AA-CC--ACAA---TTCTGATAG--AGATTAGTA-CA-A--TTAAA-TT-TTTGTTGTCAGTTA-TAGT-TGTCCAATCAACTGACTGTTA-A-T-GATATGCCCTATC--AGAATTAAAACAAATAAT---TATTTACAT---AAGTTGTG--A-C-TA---TACGTTTA-A--AGTTA-GAAACCACACACGTTGAC--GTTGACATACATATGAGGG--AC-ATGTGGTTT---TTAGCGACAGTAG-----GAC--CATTTT--ATCTA---CCT--AATCTAA--TTCC--ATT-------TCTA-----TTGG--TTGGAG-C-AGATTTATCA-TCGTAAGT----AATATTATT-A-------TCAAATAAGGACA-----TAT-A-----CTA----GTGTAT----GAAAAA--------CGGACTGACCG---TTGTCGTAT-T--------AT----------AATG---TT-ATAAGAA--C------GCTAGA--TTG-AAA-CACAGAACATCAAACGATCCTAGA-ATAAACA------ACACTGGCGACA------------TTGGATTTTTTATATATTTT-TCTCTACTACTTT-TTGGAAAGAGTTATTGATTAATGAAA-TAC-AAT--AGATTCATCATGATAATTGTTCTACATGGTTGAGTTTGTAGCGTT--GTTGACTTTGACATCATTTATTACGTAG-TTGA-TACA---ATTACTTAGTTACGTTCAAATGAACATTCGGTCAGATGTTC-AGA-GCA-TCT-CATT-AATTTTCTTTTGAC-TAGCAA-TATGAG----ATCGTTT-ATA-TAAAGT-AACTGATATgc
gi|12 : agaatatgctttcctgtaacagtaaatcaaaatttccaatgctattctcggccatttaattgatttgtaaggcattactctaacacagactcataaatactattttcagaccttcataaaataaaagtcatatattgctttcaaatttgcagtatttcctttttaaaataaaacttatctttccgtaaccgggattatgtccatatgacaaacgtttcgttcaacatcgcttaatcaaccgactttggctgtctaaacaagcatactgaagtcaacattttattcatccaagaagtcacattggcaaaatttaaacatattcgtcttatactacttttttgacaatcatttacaaatatacgatgcattaacctgatacaagtatcaataaatacaatataaccttgcattttcgttcaatggatatgcgcccataaaataaaacttcaaagaggctttatccgatgatatgaaggcaaatagtgtggagaaacctattcttgcttgatttttttttaggtgcctatcagacttttcaattccgttacggatctattacacgcttaacggatatatagattatttaatagatcaacacctttcacaaaaaatctacgaggcataccgctgaacatcatgttgagatgagtaccatataacgtaatggtttataaaaaacgctgataaaatctggtgaggacaggcgtaccaactctaatatttctctataaatgcgctatgagtaaacaatagttctttatatatc--------------A-------------CAT--GAAGAT-TTAAA--CATT--TTTGTT---GAAA-TGC-AA-CC--ACAG--TTTCTGATAG--AGAT--GTA-GC-AA-TTAAA-TT-TT----GTCAAGAA-T--T-T-CC-----AA-TCA-AATGACG-T-AAGAACCC--A-T--AGAATAAAA--CAA-AAT---TATTCACAT---A-GTTTTG-CA-C-TA---TA-GTGTGAA--A--TA-AAAGC---A--CGT-TAC--G--GA-AT-CAT------A--AC-ATAT----T---TAAGCGA-CA-TG-----T----CATTTT--AC--AC--CAT--G----AA--TTC---A-T---AAT-TCC------TTG---TTGGGA-tagcagatagaatggtgt
gi|1 : gttagacaatatgcctttaagcaag--GAAGTT-TTAAAAACATTGATTTGTT---GAAACTGC-TAACCGTACAA--TTTCTAAT-AGAAGAT--GTAATC-AA-TTAAA-TT-TT----GTCAAAAA-T--T-TGCA-----AAATCAAATTGATG-TTAAGAGACCC-A-C--AGAATAGATAACAAAAAT---TATTTACATCCCA-GCATTTGCAGC-TAAACTA-GTGTG-AAGA--TA-AAAAC---A--CGT-TAA--G--GA-AT-CAG-----CA--ACAATGT----TAA-TAAGCGT-CC-AG-----GTTTCCATTTT--AC--AGCCCAT--AA---AT--TTC---A-T---AATCTCC------TTGATTTTGGGAGT-TGATTT-TCATTCGTAAGTAC--A----TATCAA-------ACAAAC----AC------CATCC-----ATACTAGTTATC-----GAAAAGAAGAGAATCAG-----GCGCGTTT------C-TAAATAAAGAT----------AG-A---GT-A--AGAA--CAGGGCGGCTAGAT-CTG-AA--AAT---ACA---GAGA----TGGAGACCAACACTTGGGGC-CTGGCGAC------------ATCTGGA-TGTTATATATTTC-T-AC-A-----CTGTTGGAAAGAGTTATT--TA-AAGAAAGTAACAATAAAGATgcagattt
gi|10 : agccattcttctcccgaaaacaaaaagggtaaaatgtaattttcagaaaaacccgcaaaatttcgaaagtggattggagtaggaaactgaaaagttaaataaatggaaaaagaaaggacatgattgatgtacattaatttttgaaagttttcgccacatataccactagtatagattgatcacaatcatatactgacggaacctattaattaccctgttacgccagcgggggaacatagcatgctctaaggacgacatttggttccttttagtttttggtagacatgtaacaaggtgaaaaaacattcgacagttttagatacgctgtcaaaaaggcttacagtatatgcatagaatgtttttaacggataggtatgcaactacgaaatgttcaaagtattatctccgtttttttgatgaaatgtgtaaattatttctacttacttctttttctcaaatgattgaaatcagttcgtagaatatgcagagcaaaaacatgtttgattgtccatttgtgcatggtgttaagtaacaagtcgaaaataaacctggttactttctggtttaaaaagatgagtagcgactttcagaaaagtgaacgcttaaacttgataggttaagtcactttctgttgtttacggaaataggtatgtactcagtatgaaacgaccttaaatctaaaccataaattttttcttgttttcgtccttgtttgatatatcgggcaaaatttttcattgttggaataacagaaaatagaaaagaacataaaaagaagaaacaatatttccaataacaaaggttaatttagtcaaaagaaatagagaaaaatagtgtcgaaatttctaaaactgtaacaatttaaaatccatgataactttaataattttaaacttcaatgtgcataataatattcggcatttatttaaactggtgcccccggtctaaataagtcttcagtaaaatatgattgtgacttgtttttgcatcttaacacactctaaagattgatatagatctctaaagagcatatacagttgattgttacggaataacatggaatgattttacggaaaacatagaatacactttgataaatccaataaatatgctcaagagtaataaagtttatatcaaatgcttctcaattcatttctcttcatcgtccttttcaggcttagtcaaatgacatgaagaattgttagagaaaaaaataggtgttttttcagtgaaaactcagaaaagggttggaagagaaatatgcattcgcgtgaaaacgtaaatcaaaatttccaattatattctggcaattgaattgattttccatgcattactctaacacagtacgcgtaaataatattttaagattcatacaaaagaaaattgtcatagtatttgttaaaatttgactgagtatttcctttttctaaaaaaactgatcattcacgtaacgtgattataagtccatataacaaaactttgttctgtagaatcatcgctatatatccttaaatattttctcggactttgtgtctacaaagattgcaatgtcaaattttaattcataagtagttcacagaattggcgattataaaatagctttggttttagcattatttgaatataaacagtcatatactacgagatcaatatctgtacatgttatcttgtcaatcagattatgcgccataaaacaaacttcaacatgggctattgttatcgatgaatgaaggaaaataagtgttggcagaaaactaattgctgcgtttttgtaaaaggttgcctatcggacttttcagatgtccagttactgaattattgacgtttacggctgatatatagattaatttttaatatatcacactttcacaattagttttgtacgagggcatccggtgagcatgtagtgttgagatgacggtcatcataacgtaatgtttagataaaaaaatcggtgatctggtgaagtacagtggtacctcgggtggctatttgttgctcctgggaacaaatggctgctttttggaaaacatacgttcctttaatacaagacatg-A--TTAAA-TT-TT----GTCAAGAA-T--T-TGC------AA-TCATT-TGACG-T-AAGAACCC--A-C--AGAATAAAA--CAA-AAT---TATTTACAT---A-GTTTTG-CA-C-TA---TA-GTGTG-A--AA-TA-AACAC---AC--GT-TAC--G--GA-AT-CAT------A--AC-ATAA----T---TATGCGA-CA-GG-----C----CATTTT--A-------CAT--CAT--AAA-TTC---AT----AAT-TCC------TTG---TTGGGAGC-TGAATT--CA-TCGTAAGT----AA---TATC-A-------ACAAA-----ACA-----TAT-A-----CTG----TTATG-----GAAAAA--------CAT-----CCG---TT------C-T--------AT----------AA-AG--TTAG--ACA---C------GCTA-AA-TTG-AAA-CACAGAACA---GACATTCCTAAAT--AAACA------ACACTGACGACAg
gi|22 : -T-----GTCAAGAA-T--T-T-CC-----AA-TCA-ACTGACG-T-AAGAACTC--A-C--AGAAT-AAAATCA-GAAT---TATTTACAT---A-GTTTT-GCA-C-TT---TA-GTGTGAA--A--TA-AAAAC---A--CGT-TAC--G--GA-AT-ttgga
gi|15 : C-----AA-TCA-AATGACG-T-AAGAACCC--A-C--AGAATAGGA--TAA-AAT---TATTTACAT---A-GTTTTG-CA-C-CG---TA-GTGTG-A--A--AT-AAAAC---AC--GT-TAC--G--GA-AT-CAT------A--AC-ATGT----T---TAAGCGA-AA-GG-----C----CATTTTACA---A---CAT--A----AA--TTC---A-T---GAT-TCC------TTG---TTGGGAGG-TGATTT-TCA-TCGTAAGTA---A----TATC-A-------ACAA
gi|29 : G---TT------C-T--------AT----------AA-AG--TTAG--ACA---C------GCTAG-A-TTGAAA--TACAGAACA---AACA
gi|13 : CCTGAATA--AACA------AAACTGGCGATACTA-------------GATTTTTGTAGATTTA-T-AC-A-----CT-TTG--GACAAATA-------AC---A-TAATAA--AA---T--GTCTCGAACTT---TTAGTT--TTATGTT-----CATTTCACACA---TAA------TCG---TGTAG-ATGA-TACAATGATTT-T---TTATGC---AAA-AAAACTT--TCAGAACTTA-A-----AATCTGT--T-A----TCCTTT-ACTT-TCGA-CATGAA--------TTCAATA--AAAGTCAACC-ATATGTAAAGG
gi|27 : AAGAT---GCTTGGAAATTG-ACTG-TT--TTAGGTT--TA-C-TT---TACA-TCTAA------TTcaatg
gi|17 : aataACA-TCTAA------TTA---CGTAG-TTGA-TACA---ATTACT---TTACAT---ACA-AACGCTT--TCAGGAATTC-A---GCA-TCT-CT-T-A---TTC-TTT-AC-TAGCGA-CATG-A----AT--TCT-ATA-TAAAGT-AACC-ATATACA--GGAGAATG
gi|26 : gTT--TCAAGAACTCGATCAGCAT-CT-C--TTA---TTC-TTT-AC-TAGCGA-Cg
gi|30 : tatctcatgtacaaatatTCTAG-A-TAAAGT-AACC-ATATACA--GGAGAACG
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|16 ): AGAATCGTAAATACGTTTTGAATTCTTAAAAGAAATGCCGTATAATTGTTTTGTACTTCCTTTTTAAGAAAAAAACCCCTATGTTCTCGGTAATCATCTCCCGGACATAACAAAGGTTTCGTGAACATTGCTAAA
Unaligned ( gi|25 ): GGACTTAAAATCTGTTATCTTTTATCTTTCGAGATGAATTCAATAAAGTCAATCATATGTAAAAGCAATG
Unaligned ( gi|31 ): GGATATATAGATTATTTTAATAGATCAACA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 1111 11 1 111 11 1 333 11 1111 11 1 111 1 222222222 1 1 111 1 111 44444444444 1 11 444444 222 11 333333333 77777777777777777777777777777777777777777777 22222 11 11 666666666666666 33333333333333 2222222 5555555 1 1111 1 2 11 11 11 1 11 1111111111 11 00000000000000000000000000000000000000000000000 22 111 22222 22222 11 11 111 1 1 22222 111 111 222 11111111 1111 11 22222222 11 1 555555555555 11 2222222222 22 111 11 111 111 3333 11 1 11 8888888888888888888 222 666666666666666666 1 22 111 11111 111 22 2222222222 111 111 1 2 1 111 22222222222 22 1 1 111 1 1 111111 1111 22222222 22 1 22 3333333 111 111 2222222 1 1 1 11 111111 11111 333333333 22222222222 111 2222 1 11 1111111 22 11 44444444444444 111 111 1 22222 11111 2222222222 1111111111111111111111111111111111111111111111111111111111111111111111111111111111 111 11 2222222222222 111 1111 1111 11111 1111 11111 1 11 7777777777777777 1 11 222222222222 1 11 2222222 22222 111 22222222 111 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 111 1111 111111 111 2222 111 22 111 222222222222 11111 111111 11111111111 33333333333333333 4444444444444444444444 22 111111 1 11111 1111111 22222222222222 222222 22222 2222222222222222 111 111111 222222222 1111 11111111111 1 22 22222222 4444444444444 1111 1111 1111 1111 2222 1111111 444444444444 2222 111 111 2222 1 2 11 111
lowQualScore : 4444 7777 8 11 8 8 8 5 3 111 33 0 222 00 4444 33 0 777 0 444444444 0 2 777 0 777 3 22222222222 88 0 22 333333 222 11 8 8 222222222 8 8 11111111111111111111111111111111111111111111 44444 8 11 0 99 1 66 6 99 6 6 6 666666666666666 22222222222222 99 4 1111111 1111111 0 8 7777 11 0 8 0 5 11 1 77 6 8 0 8 8 88 11 8 8 8 8 8 8 6 11 88 8 8 0 9999999999 33 22222222222222222222222222222222222222222222222 0 1 88 000 8 8 00000 00000 8 8 11 8 8 8 8 8 0 8 77 8 8 8 8 0 444 6 8 6 8 00000 444 444 88 222 99999999 8 9999 0 11 8 8 00000000 8 0 11 6 000000000000 1 8 8 8 8 8 0 8 88 8 99 99 99 2 6 99 0000000000 55 0 88 8 3 000 33 777 111 9999 33 0 33 0000000000000000000 333 55 333333333333333333 0 33 8 444 33333 11 333 6 11 1 99 6 6 99 6 6 3 1111111111 99 6 6 6 888 0 8 0 444 0 3 6 0 5 99 2 000 6 6 6 5 99999999999 11 0 888 6 6 1 1 5 5 5 5 77 000 5 1 5 5 9 2 0 0 5 444444 2222 00000000 7 5 66 1 77 555 1 77 66 1 55 77 8 3 0000000 1 111 6 0 000 6 0 4444444 0 0 5 0 33 444444 5 66 5 888 66 5 00000 5 5 5 9 5 5 333333333 9999 66666666666 5 5 77 5 5 000 6 1111 77 5 66 5 5 88 66 0 5 11 0000000 00 11 66 888 88888888888888 66 333 000 0 1 33333 22222 0 3333333333 5 0000000000000000000000000000000000000000000000000000000000000000000000000000000000 5 77 1 0 666 888 1 11 5 5 5555555555555 000 7777 5 1111 5 77777 5 8888 5 5 5 6666 22222 5 5 5 5 5 5 0 5 999 66 5 5 11 0000000000000000 6 7 3 6 6 55 3 99 6 6 6 6 222222222222 9 77 7777777 33333 111 00000000 99999999 99 6 6 444 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 77 5 77 77 5 000 5 66 5 77 77 5 77 77 5 3 0000 66 4 333333 8 4 4 4 8 4 4 111 4 4 55 2 6666 0 777 111 00 4 4 222 4 000000000000 00000 4 4 55 55 4 777 4 4 4 222222 4 44444444444 11111111111111111 4 1111111111111111111111 66 8 88 4 777777 777 4 0 4 0 99999 5555555 22222222222222 77 333333 5 00000 2222222222222222 555 444444 5 66 666666666 5 0000 99999999999 7 5 888 0 5 44 4 00000000 7777777777777 5 5 6 4444 6 6 0000 9999 6 6 77 1 6666 0000 6 6 99 3 5555555 222222222222 5 5 6666 6 6 6 77 000 77 000 5 0000 77 5 5 77 6 77 1 5 3 33 5 6 6 444 2
lowQualScore : .... .... . .. . . . . . ... .. . ... .. .... .. . ... . ......... . . ... . ... . ........... .. . .. ...... ... .. . . ......... . . ............................................ ..... . .. . .. . .. . .. . . . ............... .............. .. . ....... ....... . . .... .. . . . . .. . .. . . . . . .. .. . . . . . . . .. .. . . . .......... .. ............................................... . . .. ... . . ..... ..... . . .. . . . . . . . .. . . . . . ... . . . . ..... ... ... .. ... ........ . .... . .. . . ........ . . .. . ............ . . . . . . . . .. . .. .. .. . . .. .......... .. . .. . . ... .. ... ... .... .. . .. ................... ... .. .................. . .. . ... ..... .. ... . .. . .. . . .. . . . .......... .. . . . ... . . . ... . . . . . .. . ... . . . . ........... .. . ... . . . . . . . . .. ... . . . . . . . . . ...... .... ........ . . .. . .. ... . .. .. . .. .. . . ....... . ... . . ... . . ....... . . . . .. ...... . .. . ... .. . ..... . . . . . . ......... .... ........... . . .. . . ... . .... .. . .. . . .. .. . . .. ....... .. .. .. ... .............. .. ... ... . . ..... ..... . .......... . .................................................................................. . .. . . ... ... . .. . . ............. ... .... . .... . ..... . .... . . . .... ..... . . . . . . . . ... .. . . .. ................ . . . . . .. . .. . . . . ............ . .. ....... ..... ... ........ ........ .. . . ... ............................................................................................ .. . .. .. . ... . .. . .. .. . .. .. . . .... .. . ...... . . . . . . . ... . . .. . .... . ... ... .. . . ... . ............ ..... . . .. .. . ... . . . ...... . ........... ................. . ...................... .. . .. . ...... ... . . . . ..... ....... .............. .. ...... . ..... ................ ... ...... . .. ......... . .... ........... . . ... . . .. . ........ ............. . . . .... . . .... .... . . .. . .... .... . . .. . ....... ............ . . .... . . . .. ... .. ... . .... .. . . .. . .. . . . .. . . . ... .
lowQualScore : 8888 0000 0 00 0 0 0 5 5 000 88 0 888 22 8888 88 0 555 0 888888888 0 8 000 0 000 2 88888888888 55 0 55 000000 000 00 0 0 000000000 0 0 88888888888888888888888888888888888888888888 88888 0 00 8 00 0 33 7 88 7 7 7 777777777777777 88888888888888 22 0 7777777 6666666 6 0 0000 88 6 0 8 0 00 0 66 0 0 8 0 0 88 00 0 0 0 0 0 0 0 00 88 0 0 8 7777777777 88 55555555555555555555555555555555555555555555555 8 4 44 000 0 0 00000 88888 0 0 00 0 0 0 0 0 8 0 44 0 0 0 0 8 000 0 0 0 0 00000 000 000 88 000 66666666 0 8888 8 00 0 0 00000000 0 8 00 6 222222222222 0 0 0 0 0 0 8 0 66 0 22 22 22 5 7 22 8888888888 44 8 88 0 8 000 22 555 000 0000 88 0 88 8888888888888888888 222 88 000000000000000000 0 88 0 888 00000 66 888 7 77 0 22 7 7 22 7 3 7 8888888888 88 7 7 7 333 8 0 8 000 8 3 7 5 5 22 5 888 7 7 7 0 66666666666 66 6 333 7 7 7 4 7 7 7 7 99 000 7 0 0 0 8 0 0 0 0 444444 4444 66666666 3 0 99 7 99 999 3 99 11 4 00 99 4 7 3333333 7 777 7 7 000 6 1 6666666 0 8 0 0 22 444444 0 99 0 888 11 1 11111 0 0 0 4 0 0 111111111 4444 88888888888 7 7 99 7 7 000 6 0000 55 0 99 0 0 11 99 0 0 99 8888888 66 99 99 888 11111111111111 99 000 000 6 7 99999 44444 1 1111111111 7 6666666666666666666666666666666666666666666666666666666666666666666666666666666666 7 99 4 7 999 000 4 66 7 7 6666666666666 000 3333 7 6666 7 55555 0 1111 0 0 0 9999 22222 0 0 0 0 0 0 0 7 666 77 7 7 00 2222222222222222 7 3 3 7 7 88 5 22 7 7 7 7 000000000000 2 55 8888888 55555 777 55555555 33333333 22 7 7 000 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 99 7 99 99 7 000 7 77 7 99 99 7 99 11 0 2 6666 11 4 777777 0 0 0 0 0 0 0 000 0 0 55 6 5555 8 000 000 00 0 0 555 0 888888888888 00000 0 0 55 55 0 000 0 4 4 888888 4 33333333333 22222222222222222 4 2222222222222222222222 11 9 22 4 222222 888 4 1 4 0 66666 8888888 44444444444444 99 444444 7 00000 4444444444444444 666 444444 0 99 999999999 0 6666 66666666666 4 0 888 7 7 77 9 77777777 9999999999999 7 7 7 2222 7 7 7777 8888 7 7 99 7 8888 8888 7 7 88 2 3333333 444444444444 7 7 3333 7 7 7 99 000 99 000 7 0000 99 7 7 99 0 99 7 7 7 66 7 7 7 666 0
consensus : CAGCCATTCT---CCCG----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAANGCAAA-A-TTT--GAA-GTAG--TGGAGTAGG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----G-AC-ATG-TTGNTGT--ACAT-AATTT--GAAAGTTTTCGCCACA-C------C--TAGCATA-GATTGAT-CACAATCATACACTGACGGCAAAC-AACCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A-TA-GT-CG-ATGCTGC----------TA-----------AG-----GACGACATN--G-TTC--TTTAGTTTTT-GGAAGACATTGTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TGT-CAAAAAGG-TTAC--A-----TAC--ANCGA-------TAA-----AAGTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTCC-GTTTTTGTGA--AATTGTGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTT-GTG-ATGG--TGT-AA-GTAA-CAAG----GA-A--TAAA--TGGT-------------TACTGC---GTTT-------------------TTCAGAAAA-TG-A-CGCT-T-A-----GGTA---TAAG-C-ACT--CTG-T-T-GTT-ACGGA-AAATAGT-TA-GTTCT-AGT-A-T-GAAACA---TTA-AATTTA-AACCA-T-----TTT---TC---TTGTTT-CGT---TGTT-GAA---ATCGG-CAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--AACA-TAAAAGA--GAAACAATA---T------TAAAAAAAGTAAATT-TA-TC-AA-A-GAAAAAGAG-AAAATA-G-TG--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATGATAAC-TTTAATAATTTT-AACTTC-ATGTACA-T-AT-ATAT---GCA-T-TATTT-A-ACT--TGCCC-TTA--GTC-TAA----G-T--------AAATATG-A-TGTGACTT--G--TGTG---------CA-CT--ACACAC-CT--AAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATANAGGTTTG--ATCG-TTA-CGG--TAA-ACGGGATG----TACA-GAACGGAAACACAGAATACACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAGGCT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-TTTTTCAGTGAAAA-A-CAGAA-AA-GGTTGGAAAAG-AATATG-C-TTC-C--GT---AA-CAGTAAATNAAAATTTCCAATGCTATTCT-GGCAATTA-ATTTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-G------TATTTTT-AGA--TTCAT--AA-A-ATAAA--TG-TCATA-TA--TTG--TTAAAATTGG-CT-AGTATT---TT-TTTTT---AANAAAA------CT-ATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGACAAAAC---GTTTC-G-T-GAA-CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---ANTGT-A-TGTC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGCCA--A--TTTAAA--A--TA---TT------------CTTTTT--ACA-ATT---ATTTTAAAATAT----CACA-T-C-ATAT---A------TACGAG-ATCAATA--------A--C----T-NAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAAATAAACCT-CAACAGAGG--CTATTTT-TAT-CG-ATG---A-------ATGAAGGA---AAA-T--AGT-G-T--TGG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-GTTACGGA-A-T-ATTG-ACG-TTAACGG---------A------GATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---T---CGA-ATG-CAGTACCAAT--CATAACGTAATGTTTA-AT-AAAAA---CGTTG-T---ATCTGGTGAGGTACA--G-G-GTACCG---CT--A----TTCTCTATAA---ATGCGTTATGG------------------------AA-ATA----------------TA-------------TAT--GAAGAT-TTAAA--CATT--TTTG-T---TGAAA-TGC-NA-CC--ACAA--TTTCTGATAGA-GAT--GTA-TCAA-TTAAATT----TTGTCAAGAAT--T-TG-CC--AA-TCA-AAT-GAC-G-T-AA-GA---ACCC-A-C--AGAATAAAAACCAAAAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTTA--C-A---C-A---T--AA---AA--TT-CATTAAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----NTA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----ACAA--C------GCTAGAATTGAAA-CACAGAA---CAGACATTCCTA-AATA-AAACAACA--------CTGGCGAC-----------AATT-GGA-TTTTTATATA-TT----TCTAC-AC-TTTCGGAAAGAGTTATT--TTAA-GAAA-TAAC--AATAAAGATT--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTT--AT--------ACA-TC-TAATTA--ACGTAG-TTGA-TACA-ATTA--CT---TTACGTACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTCCTTT--ACTAGCGA-CATG-AAT--TCT-ATATAAAGT-AACC-ATATACAAGGGGGAATG
Reference ( family-1054 ) : CAGCCATTCT---CCCG----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAAAGCAAA-A-TTT--GAA-GTAG--TGGAGTAGG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----G-AC-ATG-TTGGTGT--ACAT-AATTT--GAAAGTTTTCGCCACA-C------C--TAGCGTA-GATTGAT-CACAATCATACACTGACGG------AACCT---ATT--A-ATTACCCTGTT-ACG---------GAAC-A-TA-GC-CG-ACGCTGC----------TA-----------AG-----GACGACGTC--G-TTC--TTTAGTTTTN-GGNAGACATTGTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TGT-CAAAAAGGCTTAC--A-----TAC--AACGA-------TAAC----AGGTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTCCCGTTTTTGTGA--AANTNNGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTT-GTG-ATGG--TGT-AA-GTAA-CAAG----GA-A--TAAA--TGGT-------------TACTNC---GTTT-------------------TTCAGAAAA-TG-A-CGCT-T-A-----GGTA---TAAG-C-ACT--CTG-T-T-GTT-ACGGA-AAATAGT-TA-GTTCT-AGT-A-T-GAAACA---TTA-AATTTA-A-CCA-T-----TTT---TC---TTGTTT-CGT---TGTC-GAA---ATCGG-CAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--AACA-TAAAAGG--GANACAAT----T------TAAAAAAAGTAANTT-TA-TC-AA-A-GAAAAAGAG-AAAATA-G-TG--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATGATAACNTTTAATAATTTT-AACTTC-ATGTACA-T-AT-ATAT---GCA-T-TATTT-A-ACT--TGCCC-TTA--GTC-T------G-T--------AAATATG-A-TGTGACTT--G--TGTG---------CA-CT--ACACAC-CT--AAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATANAGGTTTG--ATCG-TTA-CGG--TAA-ACGGGATG----TACA-GAACGGAAACATAGAATACACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAATCCA-TT-CTCTNTCATTCGTC--TTTCAGGCT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-TTTTTCAGTGAAAA-A-CAGAA-AA-GGTTGGAAAAG-AATATG-C-TTC-C--GT---AA-CAGTAAATNAAAATTTCCAATGCTATTCT-GGCAATTA-ATTTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-G------TATTTTT-AGA--TTCAT--AA-A-ATAAA--TGTTCATA-TA--TTG--TTAAAATTNG-CT-AGTATT---TT-TTTCT---AANAAAA------CT-ATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGACAAAAC---GTTTC-G-T-GAA-CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---ANTGT-A-TGTC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGCCA--A--TT--AA--A--TA---TT------------CTTTTT--ACA-ATT---ATTTTAAAATAT----CACA-T-T-ATAT---A------TACGAG-ATCAATA--------A--C----T-NAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAAATAAACCT-CNACAGAGG--TTATTTT-TAT-CG-ATG---A-------AAGAAGGA---AAA-T--AGT-G-T--TGG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-GTTACGGA-A-T-NTTG-ACG-TTAACGG---------A------GATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---T---TGAGATG-CAGTACCAAT--TATAACGTAATGTTTA-AT-AAAAA---CGTTG-T---ATCTGGTGAGGTACA--G-G-GTACCG---CT--A----CCCTC--------ATGCGTTATGG------------------------AA-ATA----------------TA-------------TAT--GAAGAT-TTAAA--CATT--TTTG-T---TGAAA-TGC-NA-CC--ACAA--TTTCTGATAGA-GAT--GTA-TCAA-TTAAATT----TTGTCAAGAAT--T-TG-CC--AA-TCA-AAT-GAC-G-T-AA-GA---ACCC-A-C--AGAATAAAAACCAAAAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTTA--C-A---C-A---T--AA--TAA--TT-CATTAAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----ATA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----ACAA--C------GCTAGAATTGAAA-CACAGAA---CAGACATTCCTA-AATA-AAACAACA--------CTGGCGAC-----------AATT-GGA-TTTTTATATA-TT----TCTAC-AC-TTTTGGAAAGAGTTATT--TTAA-GAAA-TAAC--AATAAAGATT--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTT--AT--------ACA-TC-TAATTA--ACGTAG-TTGA-TACA-ATTA--CT---TTACGTACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTCCTTT--ACTAGCGA-CATGAAAT--TCT-ATATAAAGT-AACC-ATATACAAGGGAGAACG
gi|1 : AGCCATTCTTCTCCCGAAAAC-AAAAAGG-GTAAAATGTAATTTTCAGAAAAACCCGCAAA-A-TTTCGAAA-GTGGATTGGAGTAGG-A--AACTGAAAAGTTAAA-TAAATGGAAAAAGAAAG----G-AC-ATGATTGATGT--ACATTAATTTTTGAAAGTTTTCGCCACA-TATACCAC--TAGTATA-GATTGAT-CACAATCATATACTGACGG------AACCT---ATT--A-ATTACCCTGTT-ACGCCAGCGGGGGAAC-A-TA-GC----ATGCT-C----------TA-----------AG-----GACGACATTTGG-TTCCTTTTAGTTTTT-GGTAGACAT-GTA--A-CAAGG--TGAAAAAACA-TTCGACAGTTTTAGATACGCTGT-CAAAAAGGCTTAC--AGTATATGC--ATAGAATGTTTTTAACGGATAGGTATGCAACT-A-----CGAAATGTTCAA-AGTATTATCTCC-GTTTTTTTGATGAAATGTGTA-AATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAATCAGT-TCGTAGAATATGCAGAGC-AAAAACATGTTTGATTGTCCATTT-GTGCATGG--TGTTAA-GTAA-CAAGTCGAAA-A--TAAACCTGGT-------------TACTTTCTGGTTTAAAAAGATGAGTAGCGACTTTCAGAAAAGTG-AACGCT-T-AAACTTGATAGGTTAAGTC-ACTTTCTG-T-T-GTTTACGGA-AA-TAGG-TATGTACTCAGT-A-T-GAAACGACCTTA-AATCTA-AACCA-TAAATTTTT---TC---TTGTTTTCGTCCTTGTT-TGATATATCGGGCAA-AATTTTTCATTG--TTGGAATA-ACAGAAAATAGAAAAGAACA-TAAAAAGAAGAAACAATA---TTTCCAATAACAAAGGTTAATT-TAGTCAAA-A-GAAATAGAGAAAAATA-G-TGTCGAAATTTCTA--AAACTG--T-AA--CAATTTAAAATC-C----ATGATAAC-TTTAATAATTTTAAACTTCAATGTGCA-TAATAATATTCGGCATT-TATTTAA-ACTGGTGCCC-CCG--GTC-TAAATAAG-TCTTCAGTAAAATATG-ATTGTGACTT--GTTTTTG---------CATCTTAACACACTCT--AAAGATTGA--TATA--GATCTC-TAAAGAGCATATACAG--TTG--ATTG-TTA-CGGAATAACATGGAATGATTTTACG-GA----AAACATAGAATACACTTTGAT-AAATCCA-ATA---AATA-TG-CTCAAGAGTAATAAAGTTTA--TATCAAATGCTTCTCAATTCATTT-CTCT-TCA-TCGTCCTTTTCAGGCTTAGTCAA-ATGA-C-ATGAAGAATTGTT---AGAGAAAAAAATAGGTGTTTTTTCAGTGAAAA-CTCAGAA-AAGGGTTGGAAGAGAAATATG-CATTCGC--GTGAAAA-C-GTAAATCAAAATTTCCAATTATATTCT-GGCAATTG-AATTGATTTTCCA-TGCATT-ACT------CTAACACAGTA--CGCGTAAATAA------TATTTTA-AGA--TTCATACAA-A-AGAAAATTG-TCATAGTAT-TTG--TTAAAATTTGACTGAGTATTTCCTT-TTTCT---AAAAAAA------CTGATCAT-TCACGTAA-CGTGAT------TA-TAAG-TCC---AT--ATAACAAAACTTTGTTCT-G-TAGAATCA-TCGCTATATATCCTTA--A-ATATTTTCTCG--G-A-CTTTG--TGTC-TACA-AAG---ATTGCAA-TGTC-AA-ATTT--TAAT-TCAT--AAGT--AGTTCA-CAGAATTGGCGATTA--TA--AA--A--TAGCTTT------------GGTTTT--AGC-ATT---ATTTGAATATA-----AACAGT-C-ATAT---AC-----TACGAG-ATCAATA--------T--C----TGTACATGTT---ATCTTGTCA------A-----------TCAGATTATGC---------------G-CCA--TAAAACAAACTT-CAACATGGG--CTATTGT-TAT-CG-ATG---A-------ATGAAGGA---AAA-TA-AGT-G-T--TGG-CAGA----AAA-CTAAT----TG-C-TGCG--TTTTTGTAAAA-GGTTGCCTATCGGACTTTT-C-AGATGT-CCAGTTACTGA-ATT-ATTG-ACG-TTTACGGCTGATATATA------GATTAATTTTTAATATA-TC-AC-A-CTTTCACAAT-TAGTTTTGTACGAGGGCAT-CCGGTGAG-CATG-T----AGTGT---TGAGATGACGGT-C--AT--CATAACGTAATGTTTAGAT-AAAAAAATCGGTG-----ATCTGGTGAAGTACA--GTG-GTACC
gi|1 : --GAAGTT-TTAAAAACATTGATTTG-T---TGAAACTGC-TAACCGTACAA--TTTCTAATAGAAGAT--GTAATCAA-TTAAATT----TTGTCAAAAAT--T-TG-CA--AAATCA-AATTGAT-G-TTAA-GAG--ACCC-A-C--AGAATAGATAACAAAAAT---TATTTACATCCCAGCATTTGCAGC-TAAACTA-GTGTG-AAGA--T----AAAA-----ACA-CGTT-AA--G--GA-A---T-CAGC-A------ACAATG----T--TAA-TAAGCGT-CC-AG-----GTTTCC-ATTTTA--C-AGCCC-A---T--AA---AT--TT-CA-TAATCTCC------TTGATTTTGGGAGT-TGATTT-TCATTCGTAAGT---ACATATCAA--A--CAAAC----ACCA-----TCCATA-----CTAGTTATC-----GAAAAGAAGAGAATCAG-----GCGCGTTT------C-TAAAT---------AAAGATA-GAGTAAGAA--CAGGGCGGCTAGATCTGAAA--AT---A---CAGAGAT-------GGA-GACCAACACTTGGGGCCTGGCGAC-----------ATCT-GGA--TGTTATATA-TT----TCTAC-AC-TGTTGGAAAGAGTTATT--TAAA-GAAAGTAAC--AATAAAGATtcgggtggctatttgttgctcctgggaacaaatggctgctttttggaaaacatacgttcctttaatacaagacatggaagttttaaaaacattgatttgttgaaactgctaaccgtacaatttctaatagaagatgtaatcaattaaattttgtcaaaaatttgcaaaatcaaattgatgttaagagacccacagaatagataacaaaaattatttacatcccagcatttgcagctaaactagtgtgaagataaaaacacgttaaggaatcagcaacaatgttaataagcgtccaggtttccattttacagcccataaatttcataatctccttgattttgggagttgattttcattcgtaagtacatatcaaacaaacaccatccatactagttatcgaaaagaagagaatcaggcgcgtttctaaataaagatagagtaagaacagggcggctagatctgaaaatacagagatggagaccaacacttggggcctggcgacatctggatgttatatatttctacactgttggaaagagttatttaaagaaagtaacaataaagatg
gi|10 : agccattcttctcccgaaaacaaaaagggtaaaatgtaattttcagaaaaacccgcaaaatttcgaaagtggattggagtaggaaactgaaaagttaaataaatggaaaaagaaaggacatgattgatgtacattaatttttgaaagttttcgccacatataccactagtatagattgatcacaatcatatactgacggaacctattaattaccctgttacgccagcgggggaacatagcatgctctaaggacgacatttggttccttttagtttttggtagacatgtaacaaggtgaaaaaacattcgacagttttagatacgctgtcaaaaaggcttacagtatatgcatagaatgtttttaacggataggtatgcaactacgaaatgttcaaagtattatctccgtttttttgatgaaatgtgtaaattatttctacttacttctttttctcaaatgattgaaatcagttcgtagaatatgcagagcaaaaacatgtttgattgtccatttgtgcatggtgttaagtaacaagtcgaaaataaacctggttactttctggtttaaaaagatgagtagcgactttcagaaaagtgaacgcttaaacttgataggttaagtcactttctgttgtttacggaaataggtatgtactcagtatgaaacgaccttaaatctaaaccataaattttttcttgttttcgtccttgtttgatatatcgggcaaaatttttcattgttggaataacagaaaatagaaaagaacataaaaagaagaaacaatatttccaataacaaaggttaatttagtcaaaagaaatagagaaaaatagtgtcgaaatttctaaaactgtaacaatttaaaatccatgataactttaataattttaaacttcaatgtgcataataatattcggcatttatttaaactggtgcccccggtctaaataagtcttcagtaaaatatgattgtgacttgtttttgcatcttaacacactctaaagattgatatagatctctaaagagcatatacagttgattgttacggaataacatggaatgattttacggaaaacatagaatacactttgataaatccaataaatatgctcaagagtaataaagtttatatcaaatgcttctcaattcatttctcttcatcgtccttttcaggcttagtcaaatgacatgaagaattgttagagaaaaaaataggtgttttttcagtgaaaactcagaaaagggttggaagagaaatatgcattcgcgtgaaaacgtaaatcaaaatttccaattatattctggcaattgaattgattttccatgcattactctaacacagtacgcgtaaataatattttaagattcatacaaaagaaaattgtcatagtatttgttaaaatttgactgagtatttcctttttctaaaaaaactgatcattcacgtaacgtgattataagtccatataacaaaactttgttctgtagaatcatcgctatatatccttaaatattttctcggactttgtgtctacaaagattgcaatgtcaaattttaattcataagtagttcacagaattggcgattataaaatagctttggttttagcattatttgaatataaacagtcatatactacgagatcaatatctgtacatgttatcttgtcaatcagattatgcgccataaaacaaacttcaacatgggctattgttatcgatgaatgaaggaaaataagtgttggcagaaaactaattgctgcgtttttgtaaaaggttgcctatcggacttttcagatgtccagttactgaattattgacgtttacggctgatatatagattaatttttaatatatcacactttcacaattagttttgtacgagggcatccggtgagcatgtagtgttgagatgacggtcatcataacgtaatgtttagataaaaaaatcggtgatctggtgaagtacagtggtacctcgggtggctatttgttgctcctgggaacaaatggctgctttttggaaaacatacgttcctttaatacaagacatgA-TTAAATT----TTGTCAAGAAT--T-TG-C---AA-TCA-TTT-GAC-G-T-AA-GA---ACCC-A-C--AGAATAAAA--CAAAA-T---TATTTACAT---AGTTTTG-CA-C-TA---TA-GTGTG-A--AA-T----AAAC-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATA----A--T---TATGCGA-CA-GG-----C----C-ATTTTA--C-AT--C-A---T--AA----A--TT-CAT-AAT-TCC------TTG---TTGGGAGC-TGAATT--CA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----CTG-TTATG-----GAAAAA--------CAT-----CCG---TT------C-T--AT---------AAAGTTA-G----AC-A--C------GCTA-AATTGAAA-CACAGAA---CAGACATTCCTA-AAT--AAACAACA--------CTGACGAC------------ATT-GGA-g
gi|11 : T-------------------TTCAGAAA--TG-A-CGCT-TTA-----GGT----TAAG-C-ACT--CTGGT-T-GTT-ACGGA-AAATAGT-TT-GTT-T-AGT-A-T-GAAACA---TTA-AATTTA-A-CCGTT-----TTT---TC---TTGTTT-CGT---TGTT-GAA---ATCGG-CAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--A--A-TAAAAGA--GAAACAATAAAAA------AAAAAAAAGTAAATT-TA-TC-AA-A-GAAAAAGAG-AAAAAATG-TG--AAAATT--TA--AAACTGACT-AA--CAATTCGA---C-C----ATGCTAAC-TTTAATAATTTT-AACTTC-ATGTACA-T-
gi|12 : atggcactggttttcagataatacgaA-------------CAT--GAAGAT-TTAAA--CATT--TTTG-T---TGAAA-TGC-AA-CC--ACAG--TTTCTGATAGA-GAT--GTA-GCAA-TTAAATT----TTGTCAAGAAT--T-T--CC--AA-TCA-AAT-GAC-G-T-AA-GA---ACCC-A-T--AGAAT-AAAAC--AAAAT---TATTCACAT---AGTTTT-GCA-C-TA---TA-GTGTGAA--A--T----AAAA-----GCA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATA----T--T---TAAGCGA-CA-TG-----T----C-ATTTTA--C-AC--C-A---T--G----AA--TT-CA-TAAT-TCC------TTG---TTGGGAGC-AGATTT-
gi|13 : gttagacaatatgcctttaagcaagCCTG-AATA-AA-CAAAA--------CTGGCGAT-----------A-CT-AGA-TTTTTGTAGA-TT----TATAC-AC--TTTGG----------------A-CAAA-TAACATAATAAAA--T--GTCTCGAACTT------T-TAG-TTTTATGTTC---A-TTTC--AC--------ACA----TAATC---GTGTAG-ATGA-TACA-ATGATTTT---TTATGCAAAAAAA--CTTTCA----GA-ACTT----A--AAA-TCTG-TTA---TCCTTT--ACTTTCGA-CATG-AAT--TCA-ATA-AAAGTCAACC-ATATGTAAAGG
gi|14 : TGTATTA-CAAGGGT-GAAAAA-CA-TT-GACAGT---------------CAAAAAG--TTAC--A-----TAC--AACGA-------TAA------AGTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTCC-GTTTTTGTGA--AATTT-GTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTT-GTG-ATGG--TGT-AA-GTAA-CAAG----Gcaatg
gi|15 : aC--AA-TCA-AAT-GAC-G-T-AA-GA---ACCC-A-C--AGAATAGGAT---AAAAT---TATTTACAT---AGTTTTG-CA-C-CG---TA-GTGTG-A--A--A----TAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AA-GG-----C----C-ATTTTA--CAA---C-A---T--A----AA--TT-CA-TGAT-TCC------TTG---TTGGGAGG-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAA
gi|16 : AG-A--ATCGTAAAT-A------CGTTTTG-A-A--TTCTT--AA-A-AGAAA--TGC-CGTA-TAA-TTG--TT----TT-------GTACT---TCCTTTTT---AAGAAAAAAACCCCT-ATGTTCTC-GGTAATC------------A-T--C-TCCCGGAC--ATAACAAAG----GTTTC-G-T-GAA-CA-TTG---------CTAA--A-
gi|17 : --------ACA-TC-TAATTA---CGTAG-TTGA-TACA-ATTA--CT---TTACATACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-CATG-AAT--TCT-ATATAAAGT-AACC-ATATACA--GGAGAAT
gi|18 : gAA-A-CAGAA-AA-GCTTGGAAA-G-AATATG-C-TTC-G--GT---AA-CAGTAAATCAAAATTTCCAATGCTATTTG-GACAATTA-A-TTGA-TTTGTA-AGCATT-ACT------CTATCACAG-A--CTCATAAAT-A------TATTTTg
gi|19 : T--ATGA-GAAAC---GTTAA-G-T-GAA-CA-TCA--------C-TAA--T-AT--------ACCG-A-CTTTG--TGTA-TAAA-TA----AATGTAA-TGTC-AA-TTTT--C-AC-TCAT-AATGT--AG-TCG-C--AATTGGCAA--T--TT--AAG-A--TA---TT------------CTTTTT--ACA-ag
gi|2 : CAGCCATTCT---CCCG----C-AAA--AGAGTAAA-T-TAATTTTCAGAAAAAAAAGCAAA-AGTTT--GAA-GTAA--TGGAGTAGGGA--AACTGAAAAGT--AAATAAATG---AAAAAA-GACAGG-ACCATC-TTGTTA---ACAT-CATTT--GAAAGTTTTCGCCACA-C------CACTAG-GTAAGATTAATGCACAATCATACA-TGACGG------AACCT---ATTCAACATTACCCTGTT-ACG---------GAAC-AATA-CT-TGTACATTGTAGGATGGCTTTA-----------AG-----GTCGACATC--GGCTC--TTTAGTTTTATGGAAGACAT-GTATTA-CAAGGGTTTGAAAA-CA-TT-GACAGTTTTAAATACG-TTTTCAAAAAGAC--ACTGA-----TACCCATAGA-------TAATT---AAATGTACA--T-AGTATACGATAAGT--AA-AATGTTATTTCCGTTTTTTGTGA--AAATGTGTACAATTTTTATCACTGTACTTCTTTTTCTCATATTATTGAAAT-AGT-TC--A--ATAT-CAGAGTTAAAAACAT-TTTGAT-GTC-ATTT-TTGGATGT--TTT-AAAGTAAACAAG----GA-AAATAAA--TGGTAAGGGTTTTCAGATAATAC---GATT-------------------ATCAGAAA--TG-G-CGCTAT-A-----GGTT---TAAG-C-ACT--CTG-TCT-CGT-ACGGA-AAATAATATT-CTTCT-AGT-A-TCGAAACA---TTAGAATTTAGA-CCA-T-----TAT---TTGTATTGTT--CGT---TGTCTGAA---ATCTG-CAACA--TCTTAATTGGCTTG-AATA-ACAG-AAATAGCGA--A-CA-TAAA-GA--GA-ACAAT----T-------AGAAAAAGTAAATT-TA-TC-AA-AAGAAAAAGAG-AAATT--G-TG--AAAATT--TA--AAACTGACT-AAACCAATTCAA---C-CATAGATGATAACCATTAATAATTTT-AACTTC-AAATACATT-AT-ATAT---GCA-T-TAATT---ACA--TGCCC-TTAATGTCTT------G-T--------AAATATG-A-TG-GACTTGGG--TGTGGTGTTGTGCCA-CTA-ACAAAC-CT--AAAGAT--A--TAT-AGAA-CTCATAGA--GCATATACAGGTTTGAAATCG-TTA-CGG--AAA-AC-AGATG----T-----TACGGAAACAT----TA-GCTTTG-TGAATCCCACAGTAAAAATATTGCCTCAAG-G---TAGAGTTTGTCTACAAAATGCTTCTCAATCCA-TT-CTCT-TCA-TCGTC---TTCAGGCT--ATCAA-ATGAGCGATGAAA-AC--TGGGAG---AGAAAAATA--TG-TTTTTCA-TG-AAA-A-CAGAA-AA-GGTTGG--AAG-AATATGCC-TTC-C--GT---AA-CAGTAAATAAAAATTTTC-ATGGCA-TCT-GGCAATTA-ATTCGAGTTTGTA-TGCATTAACTCTAGAGCTGAT-CAG-ACTCTCGTACAT-GTAAAATTATTTTT-AGA--CTC-T--AAGA-AGAAA--TG-TCATA-TAGTTTG--TTAAATTTGG-T---GTA------T-TTCCT---AAAAAAT------CT-AT-TT-TC-CGTAA-CGGGAT------TA-T--G-CCC---TA--ATGACAAACA---GTTTCTG-T-G-A-CA-TCG---------CTAA--ATAC--------G--GAA-CTTTG--TGTC-TAAA-AAA---GACGTCA-TGTCAAA-ATTTGAT-ATCTCAT-AAAGT--AGATCACC--AATT-GCCA--A--TTTAAA--A--TA---TA------------A--TTT--AC--ATT---ATTTT-TAATAA----CAC------ATAT---A------TACGAG-ATCAATA--------A--C----T-TGC---CT---GT-------------AT----------TC------TGTCAATCAGATTATGCGG-CCA--T-AAATAAA-CT-CAACAGAGG--CTA--TT-CAT-CGAATG---A-------ATAAAGGA---AAATT--AGT-G-T--TGG-CAG-----AAA-CTATT--C-TGTT-TG-A--GAGGTGT---ACGG-TGCCTATCGGACTTTT-CAA-AT-T-CC-ATTACGAA-T-T-ATTG-ACG-TT-ACGGTATATAGT-A------GGTT-A-TTTTAATAGA-TCAACAA-CTTTCA-AA--TAA-TT--TACGA-GACAT-CCGGTGAA-CATT-TAATGA---T---TGACATG-GAGTACCA----TATAACGTAATGTTTA----AAAAA---CG-TG-T---ATCT------GTACAGCG-G-GTACTG---CT--A----ATCTCTACAA---ATGCGTTATGG------------------------AA-ACA----------------TAGTCTAAACAAGAGTATTGGAAGAT-TTAAA--CATT--TTTG-TTGATGAAA-TGCTTA-CC--ACAA--TTTCTGATAGC-GAT--GTA-TCAATTTAAATT----GTGTCAAGAAT--TATG--C--AA-TCA-AAT-GAC-GTT-AA-GA---ACCC-C-A--AGAATTAAAAC--AAAATTAATATATACAT---AGTTTT-GCA-C-TA---TA-GCGTG--------------AA-----ATA--------------A-A---T-CA-T-A------AC-ATG----T--T---TAAGCG--AC-AG-----G----C-ATTTT---C-G---C-A---TCCCA--TAAATTT-CA-TGAT-TCC------TTG---TT-GGAGC-TATTTT-CCA-TCGTAAGTTAAA-ATATCAA--A--CAAA-----A-CATGGTTT--ATAC----ATA-TTATG-----AAAAAA--------AAG-----CCG---TT------C-T--ATAA-------AAAGTTA-G----ACGACCC------GCTAG-ATTGAAACCACAGAA---CAGACATT-CTA-AAT------AACA--------CTGGCAGC------------ATT-GGA-TGTTTG-ATG-TT----TCTAC-AC-TTT--GGAAGAGTTA-A--TTAA-GAAA-TAAC--AATAAAGA-T--GCCTGGAAATTG----GC-T-G--TTTATG-TT---A-C-TT---T--------ACA-TCTTAATT---ACGTAGATTGAGTACC-AATA--CT---TTACATACAAACG--TTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTTCTTT--ACTAGCGACCATG-AAT--TCT-ATAT
gi|20 : AAAATTTCCAATGCTATTCT-GGCAATTG-GTT-GA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-A------TA-TTTT-AGA--TTCAT--AA-A-ATAAA--TG-TCATA-TAT-TTG--TTAcatattacagaaagtg
gi|21 : CACAC-CT--AAAGAT--AACTATAACG----C-TAGAG--CTTAAATAGGCTTG--ACCG-TTA-TGG--AAA-ACAGAAAG----TT-----ACGGAAATATAGGGTAAACTTTG-T-AATCCCA-AGT---AA
gi|22 : TGTCAAGAAT--T-T--CC--AA-TCA-ACT-GAC-G-T-AA-GA---ACTC-A-C--AGAATAAAATC--AGAAT---TATTTACAT---AGTTTT-GCA-C-TT---TA-GTGTGAA--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-a
gi|23 : ---AATAAAAG-----TT-AT-TT-TC-CGTAAC-GGGATGACATGTA-T--G-TCC---AT--ATGACAGA-C---GTTTC-G-T-GAG-CA-TCG---------CTAA--T-AT--------
gi|24 : GCTTCTCAATCCA-TTTCTCT-TCAT-CATC--TTTTAGGCT--AACAA-ATGA-C-ATGac
gi|26 : TA--TC---TCATGTACAAATA--TTTTCAA---GA-ACTCGATCA--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-Ctgttttcagtgaaaacagtac
gi|27 : --AATAAAGAT---GCTTGGAAATTG----AC-T-G-TTTTAGGTTT---A-C-TT---T--------ACA-TC-TAATT
gi|28 : AG-----AAA-CTATT--C-TG-C-TG-A--TTTTTA----A-GG-TGCCTATCGGACTTTT-C-A-AT-T-C
gi|29 : G---TT------C-T--AT---------AAAGTTA-G----AC-A--C------GCTAG-ATTGAAA-TACAGAA---CAAACA
gi|3 : CAGCCATTCT---CC-G----C-AAA--GG-GTAAA-T-TAATTTTC-GAAAAAAATGCAAA-A-TTT--GAAAGTA---TGGAGT-GG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----GTAC-ATG-TTG-TGT--ACAT-AATTT--GAAAGTTT-CGCCACAAC------C--TAGCATA-GATTGAT-CACAATCATACACTGACGGCAAAC-AACCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A-TA-AT-CA-ATGCTGC----------TAGAGCGGAAACCAGTACTCGACGACAT---G-TTC--TTTAGTTTTG-GAAAGACATTGTATTA-CAAGGGTTGAAAAA-CA-TG-GACAG-------------AT-CAAAAAG--TT-C--A-----TAC--AACGA-------TAA-----AAGTATGCAACTCAG----CGAA--GCTCAATAGTATTA-CTCTCGTTTTTGTGA--AATTGT-TACAATT-TTTCTACT-TACTTCTTTTTCTCAAATGATTGAACT-AGTATC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTTCGTG-ATGG--TGT-AA-GTAA-CA-G----GA-G--TAAA--TG---------------TACTGT---GTTT-------------------TTCAGATA--TG-A-CGCT-T-A-----GGTA---TAAG-C-ACT--CTG-T-T-GTT-ACGGAGAAATAGT-TAAGTTCT-AGTCA-T-GAA-CA---TTACAATTTA-A-CCA-T-----TTT---TC---TTGTTT-CGTA--TGT---GA---ATCGC-CAA----TCT-AATTG--TTGGAATACACAG-AAATA---A--AACA-TAAAAGG--AACACACT----T------TAGAAAAAGTAATTTATA-TC-AA-A-GAAAA-GAG-AAAATA-GGTG--AAAATT--TA--AAACTGACTTAA--CAATTCAA---C------ATAATAAA---TAATAATTTT-AACTTC-ATGT-CA-T-AT--TAT---GCA-T-TATTA-ACACT--TGTCC-TTA--GTC-TA-----G-T--------AACTATGCA-TGTGACTT-----TGTG---------CA-CT--ACACAC-CCTAAAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATAAAGGTTTG--ATCGATTAACGG--TAA-ACGG--TG----TACA-GAACGGAAACACAGAAT-CACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTT-TCAGTCCA-TT--TCTATCATTCGTC--TTTCAAGAT---TCAACATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-CTTTTCAGTGAAAG-A-CAGAA-AA-GGTTGGTAAAG-AATATG-C-TTC-C--GT---AACCAGTAAAATAAAATTTCCAATGCTATTCT-GTCAATTACATTTGA-TTTGTA-TGCATT-ATC------TTGACACAG----CTCG-GAAT-G------TATTTTTAAGA--TTCAT--AA-C-ATAAA--TGTTCATACTA--ATG--TTAATATTGG-CT-ATTATT---TT-TTTTT---AATA----------T-ATCTT-TCGCGTAACCGGGAT------TA-T--G-TCC---ATCAATGACAAAAC---GTTTC-G-T-G-A-CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---AATGT-A-TAT--AA-ATTT--T-AT-TCAT-AAAGT--AG-T-A-C--AATTGGGC---A--TT--AA--A--TA---TT------------CTTTTT--ACAGATT---ATTTTAAAATAT----CACA-TCT-ATAT---A------TACGAG-ATCAATA--------A--C----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CAA--TCAAAT-AACTT-TCACAGAGGT-TTATTTTATAT-CG-ATGACCA-------AAGAAGGA---AAA----AGT-GTT--TGG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTT----A-AT-TCCC-ATTACGGA-A-TGTTTG-ACG-TTAGCGG---------A------GATT-ATTTTTAATAGACTCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---T---CGA-ATG-CAGTAACAAT--CATAACGT-ATGTTT--AT---AAA---CGTTG-T---ATC---TGAACTACA--G-G-GTGCTG---CT---------------------TGCGTT-TGG------------------------AA-AT-----------------TA-------------TAT--GAAGAT-TTAAA--CACT--TTTGTT---TGAAA-TGC-TA-CC--ACAAATTTTCTGAT-GA-GAT--GTA-TC-A-TTAAA-T----TTGTCAAGAAT--T-TG-CC--AACTCACAAT-GA--G-T-AA-GA---AACC-A-C--AGAATGAAAACCAAGAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACACCGTG-AC--G--GA-A---T-CA-TGA------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTTA----A---C-A---T--AA--CAA--TT-CATTAAT-TCC------TTG---TTGGGA-C-TGGTTT-TCACTCGTAAGT-----ATATC-A--A--CAAA-----A-C------T--ATA-----ATA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAA-TT--G----ACAA--C------GCTAGAATTG-AA-CACAGAA---CAGACATTCCTA-AATACAAACAAC---------CTGGCGATAAAAAAAAAAAAATTGGGA-TTTTTATATA-TT----TTTTC-A--TTTCG--AAGAGTTATT--TTAC-GAAA-TACT--AACTAAGATT--GCCTGGAAATTGA---AC-T-GTTTTTATGTTT---AGCGTTAAAT--------ACACTC-TAATTA--ACGTAG-TTGA-TACAGATTT--CT---TTACATAACAACG--CTTTCAG---GA-ATTC----ATCGCATTCTC--TA--TTCTTTT--ACT-GCGA-CATGAAATG-TCTAATATACAGT-AACC-ATATACAAGGGGGAAT
gi|30 : T--TCT-AGATAAAGT-AACC-ATATACA--GGAGAACa
gi|4 : CAGCCATTC-----CCG----C-AAA--GG-GTAAA-T-TAATTTTC-GAAAAAAAAGCAAATA-TTT--GAA-GTA---TGGAG-GGG-ATAAACTGAAAAGT--AA-TTAATG---AAAGAA-G----G-A--ATG-TTGGTGTGTACAT-AATT---GAAAGTTTTGTCCACA-C------A--TAGCATA-GATTGAT--ACAATCATACACTGACGGCAAACAAACCTCCTATT--A-ATTACCCTGTTCACG---------GAACTA-TAAGTACA-ATGCTGC----------TA-----------AG-----GACGAC-TG--G-TTC--TTT-GTTTTT-GGAAGACAT-GTATTAACAAGG-TTGAAAAA-CAATT-GACAGT---------------CAAAAAGG-TTAC--A-----TAC--AACGA-------TAA------AGTATGCA-CT-AG----CGAAATGT-CAA-AGTATTATCTCC---TTTTGTGA--AATTT-GTACAATTATTTCTACT-TACT-CTTTTTCTCAAATGATT--AAT-AGT-TC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTT-GTG-ATGGCTTG--AA-GTAA-CAAG----GAGA--TAAA--TG----------------ACTGG---GTTT-------------------T-CAGATAA-TGGA-CGCT-T-A-----GGTA-----AG-CCACT--CTG-T-TCGTT-A-GGA-AAATAGT-TA-GTTCT-AGT-ACT-GCAACA---TTA-CATTTA-AACCA-T-----TTTATTTC---TTGTTT-CGT---TGTT-GAA---ATCGG-CAA-A--TCTTAATT---TTGGAATA-ACAG-AAATAA--A--AACAATAAAAGA--GA-ACAAT----T------TAAGAAAAGTAATTT-TA-TC-AATA-GAAAAAGAG-AAAAT--G-TG--AAAATT--TATAAAACTGA-T-AA--CAATTCAA---CAC----ATAATAACATT-AATAATTT--AACTTC-ATGTA-G-C-AT-ATTT---GCA-TGTATT----ACT--TGTCCATTA--GTC-TTA----GCT--------AAATATG-----T-ACTT--G--T------------CA-CT--ACACAC-C---AAAGAT--A--TATAAGGA--TC--AGAG--CATATAAAGGTTTG--ATCG-TT--CGG--TAA-ACAGGATG----TACATGAACGGAAACACAGAAT-CACTTTG-T-AATCCCA-AGT---A-TATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAA-----ATCAA-ATGA-C-ACGAAACAT--T----A---AGAAAAATAGGTG--TTTTCAGTGAAAATA-CAGAATAA-GGTTGGAAACG-AATATG-C--TC-C--GT---AA-CAGTAAAAAAAAAGTTCCAATGCTATTCT-GGCAATTA-ATTGCA--TTGTAGTGCATT-ACT------CTGACACAG----CTCGTGAAT-G------TA-TTAT-AGA--TTCAT--AA-ATATAAA--TG-TCATA-TA--TTG--TT-AATTTGG-CT--TTATT---TT-TTTTT---AA------------T-ATATT-TC-CGTAA-CGGGAT------TA-T--G-T-C---AT--ATGAC-AAAC---GTTTC-G-T-G-A-CACTTG---------CTAA--A-ATC-------G--G-ACCTTTG--TGTCTTAAA-AAG---ATTGT---TAT--AA-ATTT--T-AT-TCAT-AAAGT--AG-TTA-C--AATTG--CA--A--TT--AA--AATTA---TT------------C--TTT--AC--ATT---ATTTT-AAATAT----CACA-T-C-ATAT---A------TACGAG-AT-AATA--------AACT----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAACATAAACTT-C-ACAGAGGGTTTATTTTATAT--G-AT----A-------ACGAAGGA---AAA-T--AGT-G-TTCTTG-CAG-----AAA-CTATT--C-TG-C-TG-A----TTTTT---A-GG-T-CCTATCGGACTTTT-C-A-AT-T-CC-ATTACGGA-A-T-GTTG-ACG-TAAGCGG---------A------GATT-ATTTTTAATAGACTCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAACCATC-T----A---T---CGA-ATG-CAGTAACAATCCCGTAACGgctga
gi|5 : AG-AATATG-C-TTT-CCTGT---AA-CAGTAAATCAAAATTTCCAATGCTATTCTCGGCCATTT-AATTGA-TTTGTAAGGCATT-ACT------CTAACACAG-A--CTCATAAAT-AC-----TATTTTC-AGACCTTCAT--AA-A-ATAAA--AGT-CATA-TA--TTGCTTTCAAATTTG-C--AGTATT---TC-CTTTTTAAAATAAAA------CTTATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGAC-AAAC---GTTTC-GTT-CAA-CA-TCG--------CTTAATCA-AC--------C--G-A-CTTTGGCTGTC-TAAACAAGCATACTG--A-AGTC-AACATTT--T-AT-TCATCCAAGA--AG-TCA-C---ATTGGCAA--AATTT--AAACA--TA---TTCGTCTTATACTACTTTTTTGACA-ATC---ATTTACAAATATACGATGCA-T-T-A-ACCTGA------TACAAGTATCAATAAAT-----A--CAATAT-AAC---CTTGCATTTTCGTTCAATGGA-----------TA------TGC---------------GCCCA--TAAAATAAAACT-TCAAAGAGG------CTT-TATCCG-ATG---AT------ATGAAGGC---AAA-T--AGT-G----TGG--AG-----AAACCTATT--CTTG-CTTG-ATTTTTTTTT---A-GG-TGCCTATCAGACTTTT-C-A-AT-T-CC-GTTACGGATC-T-ATTACACGCTTAACGGATATAT---A------GATT-A--TTTAATAGA-TCAAC-ACCTTTCACAA--AAAATC--TACGA-GGCATACCGCTGAA-CATCAT----G---T---TGAGATG--AGTACCA----TATAACGTAATGGTTT-ATAAAAAA---CGCTGATAAAATCTGGTGAGG-ACA--G-GCGTACCAACTCT--AATATTTCTCTATAA---ATGCGCTATGAGTAAACAATAGTTCTTTATATATCAA-ATA----------------CA-------------TAT--GAAGATACTAAA--CATT--TTTG-T---TGAAA-TGC-AA-CC--ACAA---TTCTGATAGA-GATTAGTA--CAA-TTAAATTTTTGTTGTCAGTTATAGT-TGTCC--AA-TCA-ACT-GACTGTT-AATGATATGCCCTATC--AGAATTAAAACAAATAAT---TATTTACATA--AGTTGTG--A-C-TA---TACGTTTA-A--AGTT----AGAAACCACACA-CGTTGAC--GTTGACA---TACA-T-ATGAGGGAC-ATGTGGTT--T---TTAGCGACAGTAG-----GAC--C-ATTTTATCT-A---C-C---T--AATCTAA--TTCCAT---T-TCTA-----TTG---GTTGGAGC-AGATTTATCA-TCGTAAGT---A-ATATT-ATTAT-CAAATAAGGA-CA-----T--ATA-----CTA-GTGTAT----GAAAAA--------CGGACTGACCG---TTGTCGTAT-T--AT---------AATGTTATA----AGAA--C------GCTAG-ATTGAAA-CACAGAACATCAAACGATCCTAGAAT--AAACAACA--------CTGGCGAC------------ATT-GGATTTTTTATATA-TTTTTCTCTACTACTTTTTGGAAAGAGTTATTGATTAATGAAA-T-AC--AAT--AGATTCATCATGATAATTGTTCTACAT-G-GTTGA-GTTTGTAG-CGTT--GTTGACTTTGACA-TC--ATTTATTACGTAG-TTGA-TACA-ATTA--CTTAGTTACGTTCAAATGAACATTCGGTCAGATGTTCAG--A--GCA-TCTCATTAATTTTCTTTTGACTAGCAA-TATGAGATCGTTT-ATATAAAGT-AACTGATAT
gi|6 : AAAAT-----CT-ATTTT-TC--GTAAC-GGGAT------TATT--GTTCC---AT--Atagcagatagaatggtgt
gi|6 : tgatgtaattagtagtccC-AA-ATTT--T-AC-TCAT-CAAGTGAAG-TCA-CG-AATTGAGCA--A--TTTAGA--A--TA---TTTTCTTAGG----CCTTTT--ACA-TTTTTGATTTTGAACTATGTT-CACA-T-TTACAT---AAAATAACACAAG-ATCAATATAGATACGA--C----T-TAC---CT---GC-------------AGTCTGTCCAATTCAGATTATGC---------------G-ACAGTTACAATAAACCTTCAACAGAGG--CTATTTT-TAT-CG-ATA---ATGGTCATATGAAGGATATAAA-TTTGGTTG-T--GGGTCAGTTTATGGA-TTATTTCC-TC-C-TG-A--AATCTT------AG-TGCCTATCAGACTTTTTC-A-AT-TTCC-GTTACG---A-T-AT-A-ACG-TTA-CGG---------ATATATAGATT-ATTTT-AATAGA-TCAAC-A-CTTTTACAACAAAATCT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TGATTGA-ATG--AGTAC--AT---ATAACGTA-TGTTTT-AT-AAAAA---CGT-G-T---ATCTGGTGAG--ACA--G-G--TACCG---CCTAA----TCTTCTCTATAAAATGCGTTATGG------------------------AACATAGTTCCTTTAAACAAGACA-------------TAT--GAAGAT-TTAAA--CATT--TT-G-T---T-AAA-TGC-AA-CC--ACAA--TTTCTGATAGA-GAT--GTA-TCAA--TAAA-T----TTGTCAAGAAT--T-TT-TCCAAA-TCA-AAT-GAC-G-T-AA-GA---ACCC-A-CCAGGAATAAAAAC--AAAAT---TATTTACAT---AGTGGTTGCA-CTTATT-TA-GTGTG-A--A--TCTACGAGA-----GAA-CGTT-ACCTG--GA-ATTCT-TA-T-C------AC-ATG----TGGTGTGTGAGCG--AG-AGCGCGCG----C-ATTTTA--C-AAGCC-AACTT--CA--AAA--TTCCA--AAT-TCTCTTTGATTG---TGGGTAGCATGTCTT-TCA-TCGT-AGTTTAA-ATATC-AT-ATTCTTA-----C-CA-----T--GTAGATTTGTA-TTATGAGTTAAAAAAA--------CA-------CGAT-TT------CTT--ATACTTATATCAAAGTTA-G----AC-A--C------GCTAGGATTTAAA-CACAGAA---CATATATgttagtactcgagaatattcgtgtgtcaagcttagcgaacctaatacgcttttgtttaactaggtcagagaactctctatgtgagtgatctatataaatatgtaatgagcaaattttactcatcaagtgaagtcacgaattgagcaatttagaatattttcttaggccttttacatttttgattttgaactatgttcacatttacataaaataacacaagatcaatatagatacgacttacctgcagtctgtccaattcagattatgcgacagttacaataaaccttcaacagaggctatttttatcgataatggtcatatgaaggatataaatttggttgtgggtcagtttatggattatttcctcctgaaatcttagtgcctatcagactttttcaatttccgttacgatataacgttacggatatatagattattttaatagatcaacacttttacaacaaaatcttacgaggcatccggtgaacatctatgattgaatgagtacatataacgtatgttttataaaaacgtgtatctggtgagacaggtaccgcctaatcttctctataaaatgcgttatggaacatagttcctttaaacaagacatatgaagatttaaacattttgttaaatgcaaccacaatttctgatagagatgtatcaataaatttgtcaagaatttttccaaatcaaatgacgtaagaacccaccaggaataaaaacaaaattatttacatagtggttgcacttatttagtgtgaatctacgagagaacgttacctggaattcttatcacatgtggtgtgtgagcgagagcgcgcgcattttacaagccaacttcaaaattccaaattctctttgattgtgggtagcatgtctttcatcgtagtttaaatatcatattcttaccatgtagatttgtattatgagttaaaaaaacacgatttcttatacttatatcaaagttagacacgctaggatttaaacacagaacatatata
gi|7 : tgatgtaattagtagtccaaaatctatttttcgtaacgggattattgttccatagttagtactcgagaatattcgtgtgtcaagcttagcgaacctaatacgcttttgtttaactaggtcagagaactctctatgtgagtgatctatataaatatgtaatgag--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATa
gi|7 : TC-TAGAG--CATATAAAGGTTTG--ATCG-TTA-CGG--TAA-ACAGGATG----TACA-TAACGGAAACACAGAATACACTTTG-T-AATCCCA-AGTA--AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCATTT-CTC-ATCA-TCGTC--TTTCAAGAT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG--TTTTCAGTG-AAA-A-CAGAA-AA-GGTTGG-AAAG-AATATG-C-TTC-C--GT---AA-CAGTAAATAAAAATTTCCAATGCTATTCT-GGCAATTA-A-TTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTGAAT-G------TA-TTTT-AGA--Tannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctagagcatataaaggtttgatcgttacggtaaacaggatgtacataacggaaacacagaatacactttgtaatcccaagtaaatattgctcaagagtagagtttatctacaaaatgcttctcagtccatttctcatcatcgtctttcaagatatcaaatgacacgaaacatttaagaaaaataggtgttttcagtgaaaacagaaaaggttggaaagaatatgcttccgtaacagtaaataaaaatttccaatgctattctggcaattaattgatttgtatgcattactctgacacagactcgtgaatgtattttagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggactttgtgtctaaaaagatgtaatatcaaattttattcataaagtagtcacaattggcaatttaaaatattctttttacattattttaatatcacatcatatatacgagatcaataactaacctatatctgcgccataaataaacttcaacagaggttattttatcgatgaaagaaggaaaatagtgttggcagaaactattctgctgattttttaggtgcctatcggacttttcaattccattacggaatgttgacgttacggga
gi|7 : aaaatttaaaactgactaacaattcaaccatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--------G--G-A-CTTTG--TGTC-TAAA-AAG---A-TGT-AATATC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGC-A--A--TTTAAA--A--TA---TT------------CTTTTT--ACA--TT---ATTTTAA--TAT----CACA-T-C-ATAT---A------TACGAG-ATCAATA--------A--C----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAA-TAAACTT-CAACAGAGG--TTATTTT--AT-CG-ATG---A-------AAGAAGGA---AAA-T--AGT-G-T--TGG-CAG-----AAA-CTATT--C-TG-C-TG-A---TTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-ATTACGGA-A-T-GTTG-ACG-TT-ACGG---------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggactttgtgtctaaaaagatgtaatatcaaattttattcataaagtagtcacaattggcaatttaaaatattctttttacattattttaatatcacatcatatatacgagatcaataactaacctatatctgcgccataaataaacttcaacagaggttattttatcgatgaaagaaggaaaatagtgttggcagaaactattctgctgattttttaggtgcctatcggacttttcaattccattacggaatgttgacgttacggga
gi|8 : aaaatttaaaactgactaacaattcaaccatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctagagcatataaaggtttgatcgttacggtaaacaggatgtacataacggaaacacagaatacactttgtaatcccaagtaaatattgctcaagagtagagtttatctacaaaatgcttctcagtccatttctcatcatcgtctttcaagatatcaaatgacacgaaacatttaagaaaaataggtgttttcagtgaaaacagaaaaggttggaaagaatatgcttccgtaacagtaaataaaaatttccaatgctattctggcaattaattgatttgtatgcattactctgacacagactcgtgaatgtattttagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATAACGTAATGTTTA--T-AAAAA---CGT-G-T---ATCTG---AGATACA--G-G-GTGCTG---CT---------------------TGCGTTATGG------------------------AA-ATA----------------TA-------------T----GAAGAT-TTAAA--CACT--TTTG-T---TGAAA-TGC-TA-CC--ACAA--TTTCTGATAGA-GAT--GTA-TCAA-TTAAATT----TTGTCAAGAAT--T-TG-C---AA-TCA-AAT-GAC-G-T-AA-GA---AACC-A-C--AGAATAAAA--CAAAA-T---TATTTACAT---AGTTTTG-CA-C-TA---TA-GTGTG-A--AA-T----AAAA-----ACA-CGTG-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA--G-AG-----G----CCATTTTA--C-A---CCA---T--AA----A--TT-CAT-AAT-TCC------TTG---TTGGGAGC-TGGTTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----ATA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----AC-A--C------GCTAG-ATTGAAA-CACAGAA---CAGACATTCCTA-AAT--AAACAACA--------CTGGCGAC------------ATT-GGA-TTTTTATATATTT----TCTTC-AC-TTTC-GAAAGAGTTA-T--TTAA-GAAA-TAAC--AATAAAGA-T--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTTAAAT--------ACA-TC-TAATT---ACGTAG-TTGA-TACA-ATTA--CT---TTACATACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-CATG-AAT--TCT-ATATAAAGT-AACC-ATATAC-AGGGGGAATga
gi|9 : CAGCCATTCT---CCCG----CAAAA--GG-GTAAA-T-gc
gi|9 : ACTGACGG------AACCT---ATT--A-ATTACCCTGTT-ACG---------GAAC-A-TA-GC----ATGCT-C----------TA-----------AG-----GACGACGTG--G-TTC--TTTAGTTTTT-GGTAGACA-TGTATTA-CAAGGG-TGAAAAA-CA-TT-GACAGTTTTAGATACGTTGT-CAAAAAG--TTAA--A-----TAT--ATCCA-------TAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaactgacggaacctattaattaccctgttacggaacatagcatgctctaaggacgacgtggttctttagtttttggtagacatgtattacaagggtgaaaaacattgacagttttagatacgttgtcaaaaagttaaatatatccatagatgattaaatgttttacgataaagtatgc
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|25 ): GGACTTAAAATCTGTTATCTTTTATCTTTCGAGATGAATTCAATAAAGTCAATCATATGTAAAAGCAATG
Unaligned ( gi|31 ): GGATATATAGATTATTTTAATAGATCAACA
Alignments
lowQualScore : 11111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 1111 11 1 111 11 1 333 11 1111 11 1 111 1 222222222 1 1 111 1 111 44444444444 1 11 44444 333 11 333333333 6666666666666666666666 2 333333333333333333 111 11 2 666666666666666 11111111111111 2222222 3333333 1 1111 1 11 1 1111 1 11 1111111111 11 33333333333333333333333333333333333333333 22 1 22222 22222 11 111 11 111 1 22222 111 111 111 111 1111 11 22222222 111 1 55555555555 1 11 2222222222 111 11 111 111 3333 11 1 11 66666666666666666 222 666666666666666666 1 22 111 11111 111 22 2222222222 111 111 1 1 1 111 222222222222 22 1 1 111 1 1 111111 1111 22222222 1 22 11111 2222 111 111 2222222 1 1 1 11 111111 11111 333333333 22222222222 111 2222 1 11 11 44444444444444 111 111 1 11111 11111 111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111 11 3333333 111 1111 11111 1111 11111 1 11 7777777777777777 1 11 33333333 2 11 2222222 2222 111 22222222 1111111 1111 5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 22222222 111 111 11 1111 1111111 1 111 2222 111 22 111 222222222222 11111 111111 11111111111 33333333333333333 333 111 22 111111 1 11111 1111111 22222222222222 222222 22222 2222222222222222 111 111111 222222222 1111 11111111111 1 22 22222222 4444444444444 1111 1111 1111 1111 2222 1111111 444444444444 2222 111 111 2222 1 11 111
lowQualScore : 4444 7777 8 11 8 8 8 5 1 111 33 0 222 00 4444 33 0 777 0 444444444 0 0 777 0 777 3 22222222222 0 3 22 11111 8 111 11 8 8 222222222 8 6666666666666666666666 8 0 999999999999999999 3 999 8 11 0 8 1 3 6 999 6 6 6 666666666666666 88888888888888 99 1 1111111 0000000 0 8 7777 11 0 8 0 8 8 11 1 0 6 8 0 8 8 9999 8 8 8 8 8 8 6 11 88 8 8 0 9999999999 33 77777777777777777777777777777777777777777 0 4 0 1 88 6 8 8 00000 00000 8 8 11 8 8 111 88 8 77 8 8 8 8 0 444 6 0 0 88888 444 444 8 0 444 8 88 444 8 9999 0 11 8 8 00000000 8 111 0 88888888888 1 8 8 6 8 0 88 44 8 99 99 99 2 6 99 0000000000 88 88 8 3 000 33 777 111 9999 33 0 33 55555555555555555 333 55 333333333333333333 0 33 8 444 33333 11 333 6 11 1 99 6 6 99 6 6 3 1111111111 99 6 6 6 888 0 8 0 444 0 3 6 5 5 99 2 000 6 6 6 5 333333333333 11 0 888 6 6 1 1 5 5 5 5 77 000 5 1 5 5 9 2 0 0 5 444444 2222 00000000 7 5 66 1 77 555 1 77 5 1 55 77 33333 1 7777 1 111 6 000 6 0 4444444 0 0 5 0 33 444444 5 66 5 888 66 5 00000 5 5 5 777 5 333333333 9999 66666666666 5 5 77 5 5 000 6 1111 77 5 66 5 5 88 66 0 5 11 66 5 55 888 88888888888888 66 333 000 0 1 99999 5 99999 5 77 555555555 5 0000000000000000000000000000000000000000000000000000000000000000000000000000000000 5 77 1 5 1 5 88888 1 11 5 5 4444444 0 000 7777 5 8888 5 77777 5 8888 5 5 5 6666 22222 5 5 5 5 5 5 5 1 999 666 5 11 0000000000000000 6 7 3 6 6 55 3 99 6 6 6 6 11111111 0 0 77 4444444 3333 111 00000000 9999999 4444 6 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 00000000 5 000 2 77 000 5 5 22 77 77 5 77 5 1 5 0000 66 4 7777777 4 4 4 4 2 4 111 4 4 55 2 6666 0 777 111 00 4 4 222 4 000000000000 00000 4 4 55 55 4 777 4 4 4 222222 4 44444444444 11111111111111111 4 4 7777 222 4 9999 1 222 7 8 88 4 777777 777 4 0 4 0 99999 5555555 22222222222222 77 111111 5 00000 2222222222222222 555 444444 5 66 666666666 5 0000 99999999999 7 5 888 0 5 44 4 00000000 7777777777777 5 5 6 4444 6 6 8888 9999 6 6 77 1 6666 0000 6 6 99 3 5555555 222222222222 5 5 6666 6 6 6 77 000 77 000 5 0000 77 5 5 77 6 77 1 5 6 6 33 5 6 6 444
lowQualScore : .... .... . .. . . . . . ... .. . ... .. .... .. . ... . ......... . . ... . ... . ........... . . .. ..... . ... .. . . ......... . ...................... . . .................. . ... . .. . . . . . ... . . . ............... .............. .. . ....... ....... . . .... .. . . . . . .. . . . . . . . .... . . . . . . . .. .. . . . .......... .. ......................................... . . . . .. . . . ..... ..... . . .. . . ... .. . .. . . . . . ... . . . ..... ... ... . . ... . .. ... . .... . .. . . ........ . ... . ........... . . . . . . .. .. . .. .. .. . . .. .......... .. .. . . ... .. ... ... .... .. . .. ................. ... .. .................. . .. . ... ..... .. ... . .. . .. . . .. . . . .......... .. . . . ... . . . ... . . . . . .. . ... . . . . ............ .. . ... . . . . . . . . .. ... . . . . . . . . . ...... .... ........ . . .. . .. ... . .. . . .. .. ..... . .... . ... . ... . . ....... . . . . .. ...... . .. . ... .. . ..... . . . ... . ......... .... ........... . . .. . . ... . .... .. . .. . . .. .. . . .. .. . .. ... .............. .. ... ... . . ..... . ..... . .. ......... . .................................................................................. . .. . . . . ..... . .. . . ....... . ... .... . .... . ..... . .... . . . .... ..... . . . . . . . . ... ... . .. ................ . . . . . .. . .. . . . . ........ . . .. ....... .... ... ........ ....... .... . ..................................................................................................................................... ........ . ... . .. ... . . .. .. .. . .. . . . .... .. . ....... . . . . . . ... . . .. . .... . ... ... .. . . ... . ............ ..... . . .. .. . ... . . . ...... . ........... ................. . . .... ... . .... . ... . . .. . ...... ... . . . . ..... ....... .............. .. ...... . ..... ................ ... ...... . .. ......... . .... ........... . . ... . . .. . ........ ............. . . . .... . . .... .... . . .. . .... .... . . .. . ....... ............ . . .... . . . .. ... .. ... . .... .. . . .. . .. . . . . .. . . . ...
lowQualScore : 8888 0000 0 00 0 0 0 5 0 000 88 0 888 22 8888 88 0 555 0 888888888 0 8 000 0 000 2 88888888888 0 2 55 22222 0 000 00 0 0 000000000 0 4444444444444444444444 0 0 000000000000000000 8 888 0 00 8 0 4 7 7 000 7 7 7 777777777777777 88888888888888 22 0 7777777 4444444 6 0 0000 88 6 0 8 0 0 00 4 0 0 0 8 0 0 8888 0 0 0 0 0 0 0 00 88 0 0 8 7777777777 88 00000000000000000000000000000000000000000 2 0 8 4 44 0 0 0 00000 88888 0 0 00 0 0 000 88 0 44 0 0 0 0 8 000 0 8 8 00000 000 000 0 8 000 0 88 000 0 8888 8 00 0 0 00000000 0 888 6 44444444444 4 0 0 0 0 8 88 00 0 22 22 22 5 7 22 8888888888 88 88 0 8 000 22 555 000 0000 88 0 88 88888888888888888 222 88 000000000000000000 0 88 0 888 00000 66 888 7 77 0 22 7 7 22 7 3 7 8888888888 88 7 7 7 333 8 0 8 000 8 3 7 5 5 22 5 888 7 7 7 0 666666666666 66 6 333 7 7 7 4 7 7 7 7 99 000 7 0 0 0 8 0 0 0 0 444444 4444 66666666 3 0 99 7 99 999 3 99 7 4 00 99 11111 0 7777 7 777 7 000 6 1 6666666 0 8 0 0 22 444444 0 99 0 888 11 1 11111 0 0 0 222 0 111111111 4444 88888888888 7 7 99 7 7 000 6 0000 55 0 99 0 0 11 99 0 0 99 99 0 44 888 11111111111111 99 000 000 6 7 33333 7 44444 7 99 666666666 7 6666666666666666666666666666666666666666666666666666666666666666666666666666666666 7 99 4 7 4 7 44444 4 66 7 7 3333333 6 000 3333 7 0000 7 55555 0 1111 0 0 0 9999 22222 0 0 0 0 0 0 0 4 666 000 7 00 2222222222222222 7 3 3 7 7 88 5 22 7 7 7 7 00000000 7 0 55 8888888 8888 777 55555555 2222222 2222 7 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 77777777 7 000 3 99 000 7 7 44 99 99 7 99 7 4 0 6666 11 4 7777777 0 0 0 0 0 0 000 0 0 55 6 5555 8 000 000 00 0 0 555 0 888888888888 00000 0 0 55 55 0 000 0 4 4 888888 4 33333333333 22222222222222222 4 4 9999 222 4 4444 9 222 7 9 22 4 222222 888 4 1 4 0 66666 8888888 44444444444444 99 000000 7 00000 4444444444444444 666 444444 0 99 999999999 0 6666 66666666666 4 0 888 7 7 77 9 77777777 9999999999999 7 7 7 2222 7 7 5555 8888 7 7 99 7 8888 8888 7 7 88 2 3333333 444444444444 7 7 3333 7 7 7 99 000 99 000 7 0000 99 7 7 99 0 99 7 7 7 7 66 7 7 7 666
consensus : CAGCCATTCT---CCCG----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAANGCAAA-A-TTT--GAA-GTAG--TGGAGTAGG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----G-AC-ATG-TTGNTGT--ACAT-AATTT--GAAAGTTTTCGCCACA-C------C--TAG-CATAGATTGAT-CACAATCATACACTGACGGCAAACAA-CCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-GC-CGATG-CTGCTA-----------AG-----GACGACATN--G-TTC--TTTAGTTTT-TGGAAGACAT-GTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TGT-CAAAAAGG-TTAC--A-----TAC--ANCGA-------TAA-----AAGTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATTGTGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGG--TG-TAA-GTAA-CAAG----GA-A--TAAA--TGGT-------------TACT----------------------GCGNTTTTCAGAAAA-TG-ACGC-T-TA-----GGTA---TAAG-C-AC--TCT-GT-T-G-TTACGGA-AAATAGT-TA-GTTCT-AGT-A-T-GAAACA---TTA-AATTTAAACCAT----TTTT---TC---TTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--AACA-TAAAA--GAGAAACAAT---AT------TAAAAAAAGTAAATT-TA-TCAAA-AGAAAAAGAG-AAAATA-G-TG--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATGATAACT-TTAATAATTTT-AACTTC-ATGTACA-T-AT-ATAT---GCA-T-TATTT-A-ACT--TGCCC-TTA--GTCTAAG-T------------AAATATG-A-TGTGACTT--G--TGTG---------CA-CT--ACACAC-CT--AAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATANAGGTTTG--ATCG-TTA-CGG--TAA-ACGGGATG----TACA-GAACGGAAACACAGAATACACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAGGCT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-TTTTTCAGTGAAAA-A-CAGAA-AA-GGTTGGAAAAG-AATATG-C-TTC-C--GT---AAC-AGTAAATNAAAATTTCCAATGCTATTCT-GGCAATTA-ATTTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-G------TATTTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TA--TTG--TTAAAA-TTGGCT-AGTATT---TT-TTTTT---AANAAAA------CT-ATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGACAAAAC---GTTTC-G-T-GAA-CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---ANTGT-A-TGTC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGC-CAATT-TAAA-ATA---TT------------CTTTTT--ACA-ATT---ATTTTAAAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-NAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAAAT-AAACTT-CAACAGAGG--CT-ATTTT-TAT-CG-ATGA-------ATGAAGGA---AAA-T--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-GTTACGGA-A-TGTT-G-ACG-TTAACGG---------A------GATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTACCAAT--CATAACGTAATGTTTA-AT-AAAAA---CGTTG-T---ATCTGGTGAGGTACA--G-G-GTACC-------G---CTA----TT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AT----------------ACA-------------TAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-NACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCAAGAAT--T-TG-C-C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAATAAAAACCAAAAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTT-A--C-A---C-A----TAA---AATT-CATTAAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----NTA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----ACAA--C------GCTAGAATTGAAA-CACAGAA---CAGACATTCCTA-AATA-AAACAACA--------CTGGCGAC-----------AATT-GGA-TTTTTATATA-TT----TCTAC-AC-TTTCGGAAAGAGTTATT--TTAA-GAAA-TAAC--AATAAAGATT--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTT--AT--------ACA-TC-TAATTA--ACGTAG-TTGA-TACA-ATTA--CT---TTACGTACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTCCTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATACAAGGGGGAATG
Reference ( family-1054 ) : CAGCCATTCT---CCCG----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAANGCAAA-A-TTT--GAA-GTAG--TGGAGTAGG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----G-AC-ATG-TTGNTGT--ACAT-AATTT--GAAAGTTTTCGCCACA-C------C--TAG-CATAGATTGAT-CACAATCATACACTGACGGCAAACAA-CCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-GT-CGATG-CTGCTA-----------AG-----GACGACATN--G-TTC--TTTAGTTTT-TGGAAGACATTGTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TGT-CAAAAAGG-TTAC--A-----TAC--ANCGA-------TAA-----AAGTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATTGTGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGG--TG-TAA-GTAA-CAAG----GA-A--TAAA--TGGT-------------TACT----------------------GCGTTTTTCAGAAAA-TG-ACGC-T-TA-----GGTA---TAAG-C-AC--TCT-GT-T-G-TTACGGA-AAATAGT-TA-GTTCT-AGT-A-T-GAAACA---TTA-AATTTAAACCA-----TTTT---TC---TTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--AACA-TAAAA--GAGAAACAAT---AT------TAAAAAAAGTAAATT-TA-TC-AA-AGAAAAAGAG-AAAATA-G-TG--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATGATAACT-TTAATAATTTT-AACTTC-ATGTACA-T-AT-ATAT---GCA-T-TATTT-A-ACT--TGCCC-TTA--GTCTAAG-T------------AAATATG-A-TGTGACTT--G--TGTG---------CA-CT--ACACAC-CT--AAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATANAGGTTTG--ATCG-TTA-CGG--TAA-ACGGGATG----TACA-GAACGGAAACACAGAATACACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAGGCT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-TTTTTCAGTGAAAA-A-CAGAA-AA-GGTTGGAAAAG-AATATG-C-TTC-C--GT---AAC-AGTAAATNAAAATTTCCAATGCTATTCT-GGCAATTA-ATTTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-G------TATTTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TA--TTG--TTAAAA-TTGGCT-AGTATT---TT-TTTTT---AANAAAA------CT-ATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGACAAAAC---GTTTC-G-T-GAA-CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---ANTGT-A-TGTC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGC-CAATT-TAAA-ATA---TT------------CTTTTT--ACA-ATT---ATTTTAAAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-NAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAAAT-AAACCT-CAACAGAGG--CT-ATTTT-TAT-CG-ATGA-------ATGAAGGA---AAA-T--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-GTTACGGA-A-TATT-G-ACG-TTAACGG---------A------GATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTACCAAT--CATAACGTAATGTTTA-AT-AAAAA---CGTTG-T---ATCTGGTGAGGTACA--G-G-GTACC-------G---CTA----TT-----CTCT-----AT-AAA----TGCGTTATGG------------------------AA-AT----------------ATA-------------TAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-NACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCAAGAAT--T-TG-C-C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAATAAAAACCAAAAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTT-A--C-A---C-A----TAA---AATT-CATTAAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----NTA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----ACAA--C------GCTAGAATTGAAA-CACAGAA---CAGACATTCCTA-AATA-AAACAACA--------CTGGCGAC-----------AATT-GGA-TTTTTATATA-TT----TCTAC-AC-TTTCGGAAAGAGTTATT--TTAA-GAAA-TAAC--AATAAAGATT--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTT--AT--------ACA-TC-TAATTA--ACGTAG-TTGA-TACA-ATTA--CT---TTACGTACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTCCTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATACAAGGGGGAATG
gi|1 : AGCCATTCTTCTCCCGAAAAC-AAAAAGG-GTAAAATGTAATTTTCAGAAAAACCCGCAAA-A-TTTCGAAA-GTGGATTGGAGTAGG-A--AACTGAAAAGTTAAA-TAAATGGAAAAAGAAAG----G-AC-ATGATTGATGT--ACATTAATTTTTGAAAGTTTTCGCCACA-TATACCAC--TAG-TATAGATTGAT-CACAATCATATACTGACGG-----AA-CCT---ATT--A-ATTACCCTGTT-ACGCCAGCGGGGGAAC-A--------------TA-GC---ATG-CT-CTA-----------AG-----GACGACATTTGG-TTCCTTTTAGTTTT-TGGTAGACAT-GTA--A-CAAGG--TGAAAAAACA-TTCGACAGTTTTAGATACGCTGT-CAAAAAGGCTTAC--AGTATATGC--ATAGAATGTTTTTAACGGATAGGTATGCAACT-A-----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-TTGATGAAATGTGTA-AATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAATCAGT-TCGTAGAATATGCAGAGC-AAAAACATGTTTGATTGTCCATTT-GTGCATGG--TGTTAA-GTAA-CAAGTCGAAA-A--TAAACCTGGT-------------TACTTTCTGGTTTAAAAAGATGAGTAGCGACTTTCAGAAAAGTGAACGC-T-TAAACTTGATAGGTTAAGTC-ACTTTCT-GT-T-GTTTACGG--AAATAGG-TATGTACTCAGT-A-T-GAAACGACCTTA-AATCTAAACCATAAATTTTT---TC---TTGTTTTCGTCCT-TGT-TTGATATATCGGGCAA-AATTTTTCATTG--TTGGAATA-ACAGAAAATAGAAAAGAACA-TAAAAAGAAGAAACAAT---ATTTCCAATAACAAAGGTTAATT-TAGTCAAA-AGAAATAGAGAAAAATA-G-TGTCGAAATTTCTA--AAACTG--T-AA--CAATTTAAAATC-C----ATGATAACT-TTAATAATTTTAAACTTCAATGTGCA-TAATAATATTCGGCATT-TATTTAA-ACTGGTGCCC-CCG--GTCTAAA-TAAGTCTTCAGTAAAATATG-ATTGTGACTT--GTTTTTG---------CATCTTAACACACTCT--AAAGATTGA--TATA--GATCTC-TAAAGAGCATATACAG--TTG--ATTG-TTA-CGGAATAACATGGAATGATTTTACG-GA----AAACATAGAATACACTTTGAT-AAATCCA-ATA---AATA-TG-CTCAAGAGTAATAAAGTTTA--TATCAAATGCTTCTCAATTCATTT-CTCT-TCA-TCGTCCTTTTCAGGCTTAGTCAA-ATGA-C-ATGAAGAATTGTT---AGAGAAAAAAATAGGTGTTTTTTCAGTGAAAA-CTCAGAA-AAGGGTTGGAAGAGAAATATG-CATTCGC--GTGAAAAC--GTAAATCAAAATTTCCAATTATATTCT-GGCAATTG-AATTGATTTTCCA-TGCATT-ACT------CTAACACAGTA--CGCGTAAATAA------TATTTTAA-GA--TTCATACAA-A-AGAAAATTGT-CATAGTAT-TTG--TTAAAATTTGACTGAGTATTTCCTT-TTTCT---AAAAAAA------CTGATCAT-TCACGTAA-CGTGAT------TA-TAAG-TCC---AT--ATAACAAAACTTTGTTCT-G-TAGAATCA-TCGCTATATATCCTTA--A-ATATTTTCTCG--G-A-CTTTG--TGTC-TACA-AAG---ATTGCAA-TGTC-AA-ATTT--TAAT-TCAT--AAGT--AGTTCA-CAGAATTGG--CGATTATAAA-ATAGCTTT------------GGTTTT--AGC-ATT---ATTTGAATATA----AAC-AGT---C-AT--A---T---ACTACGAG-ATCAATA--------T--C----TGTACATGTT---ATCTTGTCA------A-----------TCAGATTATGC---------------G-CCA--TAAAAC-AAACTT-CAACATGGG--CT-ATTGT-TAT-CG-ATGA-------ATGAAGGA---AAA-TA-AGT-GT--T-GG-CAGA----AAA-CTAAT----TG-C-TGCG--TTTTTGTAAAA-GGTTGCCTATCGGACTTTT-C-AGATGT-CCAGTTACTGA-ATTATT-G-ACG-TTTACGGCTGATATATA------GATTAATTTTTAATATA-TC-AC-A-CTTTCACAAT-TAGTTTTGTACGAGGGCAT-CCGGTGAG-CATG-T----AGTGTTGAGATGACGGT-C--AT--CATAACGTAATGTTTAGAT-AAAAAAATCGGTG-----ATCTGGTGAAGTACA--GTG-GTACCTCGGGTGG---CTA----TTTGTTGCTCCTGGGAAC-AAATGGCTGCTTTTTGG------------------------AA-A-----------------ACA-------------TAC--GTTCCTTTAATACAAGACATGGAAGT-TTTAAAAACATTGATTTGT---T-GAAACTGCTAACCGTACAA--TTTCTAATAGAAGAT--GTAATCAA-TTAAATT----TTGTCAAAAAT--T-TG-CAA--AA-TCA-AATTGAT-GTTAA-GAG--ACCC-A-C--AGAATAGATAACAAAAAT---TATTTACATCCCAGCATTTGCAGC-TAAACTA-GTGTG-AAGA--T----AAAA-----ACA-CGTT-AA--G--GA-A---T-CAGC-A------ACAATG----T--TAA-TAAGCGT-CC-AG-----GTTTCC-ATTTT-A--C-AGCCC-A----TAA---ATTT-CA-TAATCTCC------TTGATTTTGGGAGT-TGATTT-TCATTCGTAAGT---ACATATCAA--A--CAAAC----ACCA-----TCCATA-----CTAGTTATC-----GAAAAGAAGAGAATCAG-----GCGCGTTT------C-TAAAT---------AAAGATA-GAGTAAGAA--CAGGGCGGCTAGATCTGAAA--AT---A---CAGAGAT-------GGA-GACCAACACTTGGGGCCTGGCGAC-----------ATCT-GGA--TGTTATATA-TT----TCTAC-AC-TGTTGGAAAGAGTTATT--TAAA-GAAAGTAAC--AATAAAGAT
gi|10 : A-TTAAATT----TTGTCAAGAAT--T-TG-C----AA-TCA-TT-TGAC-G-TAA-GA---ACCC-A-C--AGAATAAAA--CAAAA-T---TATTTACAT---AGTTTTG-CA-C-TA---TA-GTGTG-A--AA-T----AAAC-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATA----A--T---TATGCGA-CA-GG-----C----C-ATTTT-A--C-AT--C-A----TAA---A-TT-CAT-AAT-TCC------TTG---TTGGGAGC-TGAATT--CA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----CTG-TTATG-----GAAAAA--------CAT-----CCG---TT------C-T--AT---------AAAGTTA-G----AC-A--C------GCTA-AATTGAAA-CACAGAA---CAGACATTCCTA-AAT--AAACAACA--------CTGACGAC------------ATT-GGA-g
gi|11 : TTTCAGAAA--TG-ACGCTT-TA-----GGT----TAAG-C-AC--TCTGGT-T-G-TTACGGA-AAATAGT-TT-GTT-T-AGT-A-T-GAAACA---TTA-AATTT-AACCGT----TTTT---TC---TTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--A--A-TAAAA--GAGAAACAATAAAAA------AAAAAAAAGTAAATT-TA-TC-AA-AGAAAAAGAG-AAAAAATG-TG--AAAATT--TA--AAACTGACT-AA--CAATTCGA---C-C----ATGCTAACT-TTAATAATTTT-AACTTC-ATGTACA-T-
gi|12 : atggcactggttttcagataatacgaA-------------CAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-AACC--ACAG--TTTCTGATAG-AGAT--GT-AGCAA-TTAAATT----TTGTCAAGAAT--T-T--C-C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-T--AGAAT-AAAAC--AAAAT---TATTCACAT---AGTTTT-GCA-C-TA---TA-GTGTGAA--A--T----AAAA-----GCA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATA----T--T---TAAGCGA-CA-TG-----T----C-ATTTT-A--C-AC--C-A----T-G---AATT-CA-TAAT-TCC------TTG---TTGGGAGC-AGATTT-
gi|13 : gttagacaatatgcctttaagcaagCCTG-AATA-AA-CAAAA--------CTGGCGAT-----------A-CT-AGA-TTTTTGTAGA-TT----TATAC-AC-TTT-GG----------------A-CAAA-TAACATAATAAAA--T--GTCTCGAACTT------T-TAG-TTTTATGTTC---A-TTTC--AC--------ACA----TAATC---GTGTAG-ATGA-TACA-ATGATTTT---TTATGCAAAAAAA--CTTTCA----GA-ACTT----A--AAA-TCTG-TTA---TCCTTT--ACTTTCGA-CATG-A-AT--TCA-ATA-AAAGTCAACC-ATATGTAAAGG
gi|14 : TGTATTA-CAAGGGT-GAAAAA-CA-TT-GACAGT---------------CAAAAAG--TTAC--A-----TAC--AACGA-------TAA-----A-GTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATT-TGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGG--TG-TAA-GTAA-CAAG----Gcaatg
gi|15 : a-C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAATAGGAT---AAAAT---TATTTACAT---AGTTTTG-CA-C-CG---TA-GTGTG-A--A--A----TAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AA-GG-----C----C-ATTTT-A--CAA---C-A----T-A---AATT-CA-TGAT-TCC------TTG---TTGGGAGG-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAA
gi|16 : AG-A--ATCGTAAAT-A------CGTTTTGA--A--TTCTT--AA-A-AGAAA--TGC-CGTA-TAA-TTG--TT-----TTG------TACT---TCCTTTTT---AAGAAAAAAACCCCT-ATGTTCTC-GGTAATC------------A-T--C-TCCCGGAC--ATAACAAAG----GTTTC-G-T-GAA-CA-TTG---------CTAA--A-
gi|17 : --------ACA-TC-TAATTA---CGTAG-TTGA-TACA-ATTA--CT---TTACATACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATACA--GGAGAATG
gi|18 : gAA-A-CAGAA-AA-GCTTGGAAA-G-AATATG-C-TTC-G--GT---AAC-AGTAAATCAAAATTTCCAATGCTATTTG-GACAATTA-A-TTGA-TTTGTA-AGCATT-ACT------CTATCACAG-A--CTCATAAAT-A------TATTTTg
gi|19 : T--ATGA-GAAAC---GTTAA-G-T-GAA-CA-TCA--------C-TAA--T-AT--------ACCG-A-CTTTG--TGTA-TAAA-TA----AATGTAA-TGTC-AA-TTTT--C-AC-TCAT-AATGT--AG-TCG-C--AATTGG--CAATT-TAAG-ATA---TT------------CTTTTT--ACA-ag
gi|2 : CAGCCATTCT---CCCG----C-AAA--AGAGTAAA-T-TAATTTTCAGAAAAAAAAGCAAA-AGTTT--GAA-GTAA--TGGAGTAGGGA--AACTGAAAAGT--AAATAAATG---AAAAAA-GACAGG-ACCATC-TTGTTA---ACAT-CATTT--GAAAGTTTTCGCCACA-C------CACTAGGTA-AGATTAATGCACAATCATACA-TGACGG-----AA-CCT---ATTCAACATTACCCTGTT-ACG---------GAAC-AATACTTGTACATTGTA-G---GATGGCT-TTA-----------AG-----GTCGACATC--GGCTC--TTTAGTTTTATGGAAGACAT-GTATTA-CAAGGGTTTGAAAA-CA-TT-GACAGTTTTAAATACG-TTTTCAAAAAGA-C-ACTGA-----TACCCATAGA-------TAATT---AAATGTACA--T-AGTATACGATAAGT--AA-AATGTTATTTC-CGTTTTTTGTGA--AAATGTGTACAATTTTTATCACTGTACTTCTTTTTCTCATATTATTGAAAT-AGT-TC----AATAT-CAGAGTTAAAAACAT-TTTGA-TGT-CATTT-TTGGATGT--TT-TAAAGTAAACAAG----GA-AAATAAA--TGGTAAGGGTTTTCAGATAAT----------------------ACGATTATCAGAAA--TG-GCGC-TATA-----GGTT---TAAG-C-AC--TCT-GTCT-C-GTACGGA-AAATAATATT-CTTCT-AGT-A-TCGAAACA---TTAGAATTTAGACCA-----TTAT---TTGTATTG-TT-CG---T-TGTCTGAA---ATC-TGCAACA--TCTTAATTGGCTTG-AATA-ACAG-AAATAGCGA--A-CA-TAAA---GAGAA-CAAT-----------TAGAAAAAGTAAATT-TA-TCAAA-AGAAAAAGAG--AAATT-G-TG--AAAATT--TA--AAACTGACT-AAACCAATTCAA---C-CATAGATGATAACCATTAATAATTTT-AACTTC-AAATACATT-AT-ATAT---GCA-T-TAATT---ACA--TGCCC-TTAATGTCT-TG-T------------AAATATG-A-TG-GACTTGGG--TGTGGTGTTGTGCCA-CTA-ACAAAC-CT--AAAGAT--A--TAT-AGAA-CTCATAGA--GCATATACAGGTTTGAAATCG-TTA-CGG--AAA-AC-AGATG----T-----TACGGAAACAT----TA-GCTTTG-TGAATCCCACAGTAAAAATATTGCCTCAAG-G---TAGAGTTTGTCTACAAAATGCTTCTCAATCCA-TT-CTCT-TCA-TCGTC---TTCAGGCT--ATCAA-ATGAGCGATGAAA-AC--TGGGAG---AGAAAAATA--TG-TTTTTCA-TG-AAA-A-CAGAA-AA-GGTTGG--AAG-AATATGCC-TTC-C--GT---AAC-AGTAAATAAAAATTTTC-ATGGCA-TCT-GGCAATTA-ATTCGAGTTTGTA-TGCATTAACTCTAGAGCTGAT-CAG-ACTCTCGTACAT-GTAAAATTATTTTTA-GA--CTC-T--AAGA-AGAAA--TGT-CATA-TAGTTTG--TTAAAT-TTGGT---GTA------T-TTCCT---AAAAAAT------CT-AT-TT-TC-CGTAA-CGGGAT------TA-T--G-CCC---TA--ATGACAAACA---GTTTCTG-T-G-A-CA-TCG---------CTAA--ATAC--------G--GAA-CTTTG--TGTC-TAAA-AAA---GACGTCA-TGTCAAA-ATTTGAT-ATCTCAT-AAAGT--AGATCACC--AATT-GC-CAATT-TAAA-ATA---TA------------A--TTT--AC--ATT---ATTTT-TAATA-----AC-A-----C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-TGC---CT---GT-------------AT----------TC------TGTCAATCAGATTATGCGG-CCA--T-AAAT-AAA-CT-CAACAGAGG--CT-A--TT-CAT-CGAATGA-------ATAAAGGA---AAATT--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TGTT-TG-A--GAGGTGT---ACGG-TGCCTATCGGACTTTT-CAA-AT-T-CC-ATTACGAA-T-TATT-G-ACG-TT-ACGGTATATAGT-A------GGTT-A-TTTTAATAGA-TCAACAA-CTTTCA-AA--TAA-TT--TACGA-GACAT-CCGGTGAA-CATT-TAATGA---TTGACATG-GAGTACCA----TATAACGTAATGTTTA----AAAAA---CG-TG-T---ATCT------GTACAGCG-G-GTACT-------G---CTA----AT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AC----------------ATAGTCTAAACAAGAGTATTGG------------AAGA--------T-TT---AAACATT--TTTGTTGAT-GAAA-TGCTTACC--ACAA--TTTCTGATAG-CGAT--GT-ATCAATTTAAATT----GTGTCAAGAAT--TATG---C--AA-TCA-AA-TGAC-GTTAA-GA---ACCC-C-A--AGAATTAAAAC--AAAATTAATATATACAT---AGTTTT-GCA-C-TA---TA-GCGTG--------------AA-----ATA--------------A-A---T-CA-T-A------AC-ATG----T--T---TAAGCG--AC-AG-----G----C-ATTTTCG--C-ATCCC-A----TAA---ATTT-CA-TGAT-TCC------TTG---TT-GGAGC-TATTTT-CCA-TCGTAAGTTAAA-ATATCAA--A--CAAA-----A-CATGGTTT--ATAC----ATA-TTATG-----AAAAAA--------AAG-----CCG---TT------C-T--ATAA-------AAAGTTA-G----ACGACCC------GCTAG-ATTGAAACCACAGAA---CAGACATT-CTA-AAT------AACA--------CTGGCAGC------------ATT-GGA-TGTTTG-ATG-TT----TCTAC-AC-TTT--GGAAGAGTTA-A--TTAA-GAAA-TAAC--AATAAAGA-T--GCCTGGAAATTG----GC-T-G--TTTATG-TT---A-C-TT---T--------ACA-TCTTAATT---ACGTAGATTGAGTACC-AATA--CT---TTACATACAAACG--TTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTTCTTT--ACTAGCGACCATG-A-AT--TCT-ATAT
gi|20 : AAAATTTCCAATGCTATTCT-GGCAATTG-GTT-GA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-A------TA-TTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TAT-TTG--TTAcatattacagaaagtg
gi|21 : CACAC-CT--AAAGAT--AACTATAACG----C-TAGAG--CTTAAATAGGCTTG--ACCG-TTA-TGG--AAA-ACAGAAAG----TT-----ACGGAAATATAGGGTAAACTTTG-T-AATCCCA-AGT---AA
gi|22 : TGTCAAGAAT--T-T--C-C--AA-TCA-AC-TGAC-G-TAA-GA---ACTC-A-C--AGAATAAAATC--AGAAT---TATTTACAT---AGTTTT-GCA-C-TT---TA-GTGTGAA--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-a
gi|23 : ---AATAAAAG-----TT-AT-TT-TC-CGTAAC-GGGATGACATGTA-T--G-TCC---AT--ATGACAGA-C---GTTTC-G-T-GAG-CA-TCG---------CTAA--T-AT--------
gi|24 : GCTTCTCAATCCA-TTTCTCT-TCAT-CATC--TTTTAGGCT--AACAA-ATGA-C-ATGac
gi|26 : TA--TC---TCATGTACAAATA--TTTTCAA---GA-ACTCGATCA--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-Ctgttttcagtgaaaacagtac
gi|27 : --AATAAAGAT---GCTTGGAAATTG----AC-T-G-TTTTAGGTTT---A-C-TT---T--------ACA-TC-TAATT
gi|28 : AG-----AAA-CTATT--C-TG-C-TG-A--TTTTTA----A-GG-TGCCTATCGGACTTTT-C-A-AT-T-C
gi|29 : G---TT------C-T--AT---------AAAGTTA-G----AC-A--C------GCTAG-ATTGAAA-TACAGAA---CAAACA
gi|3 : CAGCCATTCT---CC-G----C-AAA--GG-GTAAA-T-TAATTTTC-GAAAAAAATGCAAA-A-TTT--GAAAGTA---TGGAGT-GG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----GTAC-ATG-TTG-TGT--ACAT-AATTT--GAAAGTTT-CGCCACAAC------C--TAG-CATAGATTGAT-CACAATCATACACTGACGGCAAACAA-CCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-AT-CAATG-CTGCTAGAGCGGAAACCAGTACTCGACGACAT---G-TTC--TTTAGTTTT-GGAAAGACATTGTATTA-CAAGGGTTGAAAAA-CA-TG-GACAG-------------AT-CAAAAAG--TT-C--A-----TAC--AACGA-------TAA-----AAGTATGCAACTCAG----CGAA--GCTCAATAGTATTA-CTCTCGTTTTT-GTGA--AATTGT-TACAATT-TTTCTACT-TACTTCTTTTTCTCAAATGATTGAACT-AGTATC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTTCGTG-ATGG--TG-TAA-GTAA-CA-G----GA-G--TAAA--TG---------------TACT----------------------GTGTTTTTCAGATA--TG-ACGC-T-TA-----GGTA---TAAG-C-AC--TCT-GT-T-G-TTACGGAGAAATAGT-TAAGTTCT-AGTCA-T-GAA-CA---TTACAATTTAA-CCA-----TTTT---TC---TTG-TTTCG---TATGT---GA---ATC-GCCAA----TCT-AATTG--TTGGAATACACAG-AAATA---A--AACA-TAAAA--GGAACACACT----T------TAGAAAAAGTAATTTATA-TC-AA-AGAAAA-GAG-AAAATA-GGTG--AAAATT--TA--AAACTGACTTAA--CAATTCAA---C------ATAATAAAT---AATAATTTT-AACTTC-ATGT-CA-T-AT--TAT---GCA-T-TATTA-ACACT--TGTCC-TTA--GTCTA-G-T------------AACTATGCA-TGTGACTT-----TGTG---------CA-CT--ACACAC-CCTAAAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATAAAGGTTTG--ATCGATTAACGG--TAA-ACGG--TG----TACA-GAACGGAAACACAGAAT-CACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTT-TCAGTCCA-TT--TCTATCATTCGTC--TTTCAAGAT---TCAACATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-CTTTTCAGTGAAAG-A-CAGAA-AA-GGTTGGTAAAG-AATATG-C-TTC-C--GT---AACCAGTAAAATAAAATTTCCAATGCTATTCT-GTCAATTACATTTGA-TTTGTA-TGCATT-ATC------TTGACACAG----CTCG-GAAT-G------TATTTTTAAGA--TTCAT--AA-C-ATAAA--TGTTCATACTA--ATG--TTAATA-TTGGCT-ATTATT---TT-TTTTT---AATA----------T-ATCTT-TCGCGTAACCGGGAT------TA-T--G-TCC---ATCAATGACAAAAC---GTTTC-G-T-GA--CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---AATGT-A-TAT--AA-ATTT--T-AT-TCAT-AAAGT--AG-T-A-C--AATTGGG-CA--T-TAAA--TA---TT------------CTTTTT--ACAGATT---ATTTTAAAATAT---CAC-A-T---CTAT--A---T---A-TACGAG-ATCAATA--------A--C----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CAA--TCAAAT-AACTTT-CA-CAGAGG--TTTATTTTATAT-CG-ATGACCA----AAGAAGGA---AAA----AGT-GT--TTGG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTT----A-AT-T-CCCATTACGGA-A-TGTTTG-ACG-TTAGCGG---------A------GATT-ATTTTTAATAGACTCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTAACAAT--CATAACGTA-TGTTTA--T-AAA-----CGTTG-T---ATCTG---AACTACA--G-G-GTGCT-------G---CT-------------------------------TGCGTT-TGG------------------------AA-AT-----------------TA-------------TAT--G------------AAGA--------T-TT---AAACACT--TTTGT---TTGAAA-TGC-TACC--ACAAATTTTCTGAT-G-AGAT--GT-ATCA--TTAAATT----T-GTCAAGAAT--T-TG-C-C--AACTCACAA-TGA--G-TAA-GA---AACC-A-C--AGAATGAAAACCAAGAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACACCGTG-AC--G--GA-A---T-CA-TGA------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTT-A----A---C-A----TAAC--AATT-CATTAAT-TCC------TTG---TTGGGA-C-TGGTTT-TCACTCGTAAGT-----ATATC-A--A--CAAA-----A-C------T--ATA-----ATA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAA-TT--G----ACAA--C------GCTAGAATTG-AA-CACAGAA---CAGACATTCCTA-AATACAAACAAC---------CTGGCGATAAAAAAAAAAAAATTGGGA-TTTTTATATA-TT----TTTTC-A--TTTCG--AAGAGTTATT--TTAC-GAAA-TACT--AACTAAGATT--GCCTGGAAATTGA---AC-T-GTTTTTATGTTT---AGCGTTAAAT--------ACACTC-TAATTA--ACGTAG-TTGA-TACAGATTT--CT---TTACATAACAACG--CTTTCAG---GA-ATTC----ATCGCATTCTC--TA--TTCTTTT--ACT-GCGA-CATGAA-ATG-TCTAATATACAGT-AACC-ATATACAAGGGGGAATG
gi|30 : T--TCT-AGATAAAGT-AACC-ATATACA--GGAGAACGa
gi|4 : CAGCCATTC-----CCG----C-AAA--GG-GTAAA-T-TAATTTTC-GAAAAAAAAGCAAATA-TTT--GAA-GTA---TGGAG-GGG-ATAAACTGAAAAGT--AA-TTAATG---AAAGAA-G----G-A--ATG-TTGGTGTGTACAT-AATT---GAAAGTTTTGTCCACA-C------A--TAG-CATAGATTGAT--ACAATCATACACTGACGGCAAACAAACCTCCTATT--A-ATTACCCTGTTCACG---------GAACTA--------------TAAGTACAATG-CTGCTA-----------AG-----GACGAC-TG--G-TTC--TTT-GTTTT-TGGAAGACAT-GTATTAACAAGG-TTGAAAAA-CAATT-GACAGT---------------CAAAAAGG-TTAC--A-----TAC--AACGA-------TAA-----A-GTATGCA-CT-AG----CGAAATGT-CAA-AGTATTATCTC-C--TTTT-GTGA--AATT-TGTACAATTATTTCTACT-TACT-CTTTTTCTCAAATGATT--AAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGGCTTG--AA-GTAA-CAAG----GAGA--TAAA--TG----------------ACT----------------------GGGTTTT-CAGATAA-TGGACGC-T-TA-----GGTA-----AG-CCAC--TCT-GT-TCG-TTA-GGA-AAATAGT-TA-GTTCT-AGT-ACT-GCAACA---TTA-CATTTAAACCA-----TTTTATTTC---TTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATT---TTGGAATA-ACAG-AAATAA--A--AACAATAAAA--GAGAA-CAAT----T------TAAGAAAAGTAATTT-TA-TC-AATAGAAAAAGAG-AAAAT--G-TG--AAAATT--TATAAAACTGA-T-AA--CAATTCAA---CAC----ATAATAACA-TTAATAATTT--AACTTC-ATGTA-G-C-AT-ATTT---GCA-TGTATT----ACT--TGTCCATTA--GTCTTAGCT------------AAATATG-----T-ACTT--G--T------------CA-CT--ACACAC-C---AAAGAT--A--TATAAGGA--TC--AGAG--CATATAAAGGTTTG--ATCG-TT--CGG--TAA-ACAGGATG----TACATGAACGGAAACACAGAAT-CACTTTG-T-AATCCCA-AGT---A-TATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAA-----ATCAA-ATGA-C-ACGAAACA---TT---A---AGAAAAATAGGTG--TTTTCAGTGAAAATA-CAGAATAA-GGTTGGAAACG-AATATG-C--TC-C--GT---AAC-AGTAAAAAAAAAGTTCCAATGCTATTCT-GGCAATTA-ATTGCA--TTGTAGTGCATT-ACT------CTGACACAG----CTCGTGAAT-G------TA-TTATA-GA--TTCAT--AA-ATATAAA--TGT-CATA-TA--TTG--TT-AAT-TTGGCT--TTATT---TT-TTTTT---AA------------T-ATATT-TC-CGTAA-CGGGAT------TA-T--G-T-C---AT--ATGAC-AAAC---GTTTC-G-T-G-A-CACTTG---------CTAA--A-ATC-------G--G-ACCTTTG--TGTCTTAAA-AAG---ATTGT---TAT--AA-ATTT--T-AT-TCAT-AAAGT--AG-TTA-C--AATTG---CAATT-AAAA-TTA---TT------------C--TTT--AC--ATT---ATTTT-AAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-AT-AATA--------AACT----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAACAT-AAACTT-C-ACAGAGGGTTT-ATTTTATAT--G-AT-A-------ACGAAGGA---AAA-T--AGT-GTTCT-TG-CAG-----AAA-CTATT--C-TG-C-TG-A----TTTTT---A-GG-T-CCTATCGGACTTTT-C-A-AT-T-CC-ATTACGGA-A-TGTT-G-ACG-TAAGCGG---------A------GATT-ATTTTTAATAGACTCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAACCATC-T----A---TCGA-ATG-CAGTAACAATCCCGTAACGgctga
gi|5 : AG-AATATG-C-TTT-CCTGT---AAC-AGTAAATCAAAATTTCCAATGCTATTCTCGGCCATTT-AATTGA-TTTGTAAGGCATT-ACT------CTAACACAG-A--CTCATAAAT-AC-----TATTTTCA-GACCTTCAT--AA-A-ATAAA--AGT-CATA-TA--TTGCTTTCAAA-TTTGC--AGTATT---TC-CTTTTTAAAATAAAA------CTTATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGAC-AAAC---GTTTC-GTT-CAA-CA-TCG--------CTTAATCA-AC--------C--G-A-CTTTGGCTGTC-TAAACAAGCATACTG--A-AGTC-AACATTT--T-AT-TCATCCAAGA--AG-TCA-C---ATTGGCAAAATT-TAAACATA---TTCGTCTTATACTACTTTTTTGACA-ATC---ATTTACAAATAT----ACGA-TG--C-ATTAA---CCTGA-TACAAGTATCAATAAAT-----A--CAATAT-AAC---CTTGCATTTTCGTTCAATGGA-----------TA------TGC---------------GCCCA--TAAAATAAAACTT-CAA-AGAGG--C-----TT-TATCCG-ATGAT------ATGAAGGC---AAA-T--AGT-G---T-GG--AG-----AAACCTATT--CTTG-CTTG-ATTTTTTTTT---A-GG-TGCCTATCAGACTTTT-C-A-AT-T-CC-GTTACGGATC-TATT-ACACGCTTAACGGATATAT---A------GATT-A--TTTAATAGA-TCAAC-ACCTTTCACAA--AAAATC--TACGA-GGCATACCGCTGAA-CATCAT----G---TTGAGATG--AGTACCA----TATAACGTAATGGTTT-ATAAAAAA---CGCTGATAAAATCTGGTGAGG-ACA--G-GCGTACC-------AACTCTAATATTT-----CTCT-----AT-AAA----TGCGCTATGAGTAAACAATAGTTCTTTATATATCAA-AT----------------ACA-------------TAT--G------------AAGA--------TACT---AAACATT--TTTGT---T-GAAA-TGC-AACC--ACAA---TTCTGATAG-AGATTAGT-A-CAA-TTAAATTTTTGTTGTCAGTTATAGT-TGTC-C--AA-TCA-AC-TGACTGTTAATGATATGCCCTATC--AGAATTAAAACAAATAAT---TATTTACATA--AGTTGTG--A-C-TA---TACGTTTA-A--AGTT----AGAAACCACACA-CGTTGAC--GTTGACA---TACA-T-ATGAGGGAC-ATGTGGTT--T---TTAGCGACAGTAG-----GAC--C-ATTTT-ATCT-A---C-C----TAATCTAATTCCAT---T-TCTA-----TTG---GTTGGAGC-AGATTTATCA-TCGTAAGT---A-ATATT-ATTAT-CAAATAAGGA-CA-----T--ATA-----CTA-GTGTAT----GAAAAA--------CGGACTGACCG---TTGTCGTAT-T--AT---------AATGTTATA----AGAA--C------GCTAG-ATTGAAA-CACAGAACATCAAACGATCCTAGAAT--AAACAACA--------CTGGCGAC------------ATT-GGATTTTTTATATA-TTTTTCTCTACTACTTTTTGGAAAGAGTTATTGATTAATGAAA-T-AC--AAT--AGATTCATCATGATAATTGTTCTACAT-G-GTTGA-GTTTGTAG-CGTT--GTTGACTTTGACA-TC--ATTTATTACGTAG-TTGA-TACA-ATTA--CTTAGTTACGTTCAAATGAACATTCGGTCAGATGTTCAG--A--GCA-TCTCATTAATTTTCTTTTGACTAGCAA-TATG-AGATCGTTT-ATATAAAGT-AACTGATAT
gi|6 : AAAAT-----CT-ATTTT-TC--GTAAC-GGGAT------TATT--GTTCC---AT--Atagcagatagaatggtgt
gi|6 : tgatgtaattagtagtccC-AA-ATTT--T-AC-TCAT-CAAGTGAAG-TCA-CG-AATTGAG-CAATT-TAGA-ATA---TTTTCTTAGG----CCTTTT--ACA-TTTTTGATTTTGAACTATGTTCAC-A-TTTAC-AT--AAAAT---AACACAAG-ATCAATATAGATACGA--C----T-TAC---CT---GC-------------AGTCTGTCCAATTCAGATTATGC---------------G-ACAGTTACAAT-AAACCTTCAACAGAGG--CT-ATTTT-TAT-CG-ATAATGGTCATATGAAGGATATAAA-TTTGGTTGT--G-GGTCAGTTTATGGA-TTATTTCC-TC-C-TG-A--AATCTT------AG-TGCCTATCAGACTTTTTC-A-AT-TTCC-GTTACG---A-TAT--A-ACG-TTA-CGG---------ATATATAGATT-ATTTT-AATAGA-TCAAC-A-CTTTTACAACAAAATCT--TACGA-GGCAT-CCGGTGAA-CATC-TATG-A---TTGA-ATG--AGTAC--AT---ATAACGT-ATGTTTT-AT-AAAAA---CG-TG-T---ATCTGGTGAG--ACA----G-GTACC-------GC--CTAATC-TT-----CTCT-----ATAAAA----TGCGTTATGG------------------------AACATAGTTCCTTTAAACAAGACA-------------TAT--G------------AAGA--------T-TT---AAACA-T--TTTGT---T--AAA-TGC-AACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA--TAAA-T----TTGTCAAGAAT--T-TT-T-CCAAA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-CCAGGAATAAAAAC--AAAAT---TATTTACAT---AGTGGTTGCA-CTTATT-TA-GTGTG-A--A--TCTACGAGA-----GAA-CGTT-ACCTG--GA-ATTCT-TA-T-C------AC-ATG----TGGTGTGTGAGCG--AG-AGCGCGCG----C-ATTTT-A--C-AAGCC-AACTTCAA---AATTCCA--AAT-TCTCTTTGATTG---TGGGTAGCATGTCTT-TCA-TCGT-AGTTTAA-ATATC-AT-ATTCTTA-----C-CA-----T--GTAGATTTGTA-TTATGAGTTAAAAAAA--------CA-------CGAT-TT------CTT--ATACTTATATCAAAGTTA-G----AC-A--C------GCTAGGATTTAAA-CACAGAA---CATATATgttagtactcgagaatattcgtgtgtcaagcttagcgaacctaatacgcttttgtttaactaggtcagagaactctctatgtgagtgatctatataaatatgtaatgagcaaattttactcatcaagtgaagtcacgaattgagcaatttagaatattttcttaggccttttacatttttgattttgaactatgttcacatttacataaaataacacaagatcaatatagatacgacttacctgcagtctgtccaattcagattatgcgacagttacaataaaccttcaacagaggctatttttatcgataatggtcatatgaaggatataaatttggttgtgggtcagtttatggattatttcctcctgaaatcttagtgcctatcagactttttcaatttccgttacgatataacgttacggatatatagattattttaatagatcaacacttttacaacaaaatcttacgaggcatccggtgaacatctatgattgaatgagtacatataacgtatgttttataaaaacgtgtatctggtgagacaggtaccgcctaatcttctctataaaatgcgttatggaacatagttcctttaaacaagacatatgaagatttaaacattttgttaaatgcaaccacaatttctgatagagatgtatcaataaatttgtcaagaatttttccaaatcaaatgacgtaagaacccaccaggaataaaaacaaaattatttacatagtggttgcacttatttagtgtgaatctacgagagaacgttacctggaattcttatcacatgtggtgtgtgagcgagagcgcgcgcattttacaagccaacttcaaaattccaaattctctttgattgtgggtagcatgtctttcatcgtagtttaaatatcatattcttaccatgtagatttgtattatgagttaaaaaaacacgatttcttatacttatatcaaagttagacacgctaggatttaaacacagaacatatata
gi|7 : tgatgtaattagtagtccaaaatctatttttcgtaacgggattattgttccatagttagtactcgagaatattcgtgtgtcaagcttagcgaacctaatacgcttttgtttaactaggtcagagaactctctatgtgagtgatctatataaatatgtaatgag--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATa
gi|7 : TC-TAGAG--CATATAAAGGTTTG--ATCG-TTA-CGG--TAA-ACAGGATG----TACA-TAACGGAAACACAGAATACACTTTG-T-AATCCCA-AGTA--AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCATTT-CTC-ATCA-TCGTC--TTTCAAGAT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG--TTTTCAGTG-AAA-A-CAGAA-AA-GGTTGG-AAAG-AATATG-C-TTC-C--GT---AAC-AGTAAATAAAAATTTCCAATGCTATTCT-GGCAATTA-A-TTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTGAAT-G------TA-TTTTA-GA--Tannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctagagcatataaaggtttgatcgttacggtaaacaggatgtacataacggaaacacagaatacactttgtaatcccaagtaaatattgctcaagagtagagtttatctacaaaatgcttctcagtccatttctcatcatcgtctttcaagatatcaaatgacacgaaacatttaagaaaaataggtgttttcagtgaaaacagaaaaggttggaaagaatatgcttccgtaacagtaaataaaaatttccaatgctattctggcaattaattgatttgtatgcattactctgacacagactcgtgaatgtattttagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggactttgtgtctaaaaagatgtaatatcaaattttattcataaagtagtcacaattggcaatttaaaatattctttttacattattttaatatcacatcatatatacgagatcaataactaacctatatctgcgccataaataaacttcaacagaggttattttatcgatgaaagaaggaaaatagtgttggcagaaactattctgctgattttttaggtgcctatcggacttttcaattccattacggaatgttgacgttacggga
gi|7 : aaaatttaaaactgactaacaattcaaccatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--------G--G-A-CTTTG--TGTC-TAAA-AAG---A-TGT-AATATC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGC--AATT-TAAA-ATA---TT------------CTTTTT--ACA--TT---ATTTTAA--TAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAA-T-AAACTT-CAACAGAGG--TT-ATTTT--AT-CG-ATGA-------AAGAAGGA---AAA-T--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A---TTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-ATTACGGA-A-TGTT-G-ACG-TT-ACGG---------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggactttgtgtctaaaaagatgtaatatcaaattttattcataaagtagtcacaattggcaatttaaaatattctttttacattattttaatatcacatcatatatacgagatcaataactaacctatatctgcgccataaataaacttcaacagaggttattttatcgatgaaagaaggaaaatagtgttggcagaaactattctgctgattttttaggtgcctatcggacttttcaattccattacggaatgttgacgttacggga
gi|8 : aaaatttaaaactgactaacaattcaaccatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctagagcatataaaggtttgatcgttacggtaaacaggatgtacataacggaaacacagaatacactttgtaatcccaagtaaatattgctcaagagtagagtttatctacaaaatgcttctcagtccatttctcatcatcgtctttcaagatatcaaatgacacgaaacatttaagaaaaataggtgttttcagtgaaaacagaaaaggttggaaagaatatgcttccgtaacagtaaataaaaatttccaatgctattctggcaattaattgatttgtatgcattactctgacacagactcgtgaatgtattttagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATAACGTAATGTTTA--T-AAAAA---CGT-G-T---ATCTG---AGATACA--G-G-GTGCT-------G---CT-------------------------------TGCGTTATGG------------------------AA-AT----------------ATA-------------T----G------------AAGA--------T-TT---AAACACT--TTTGT---T-GAAA-TGC-TACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCAAGAAT--T-TG-C----AA-TCA-AA-TGAC-G-TAA-GA---AACC-A-C--AGAATAAAA--CAAAA-T---TATTTACAT---AGTTTTG-CA-C-TA---TA-GTGTG-A--AA-T----AAAA-----ACA-CGTG-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA--G-AG-----G----CCATTTT-A--C-A---CCA----TAA---A-TT-CAT-AAT-TCC------TTG---TTGGGAGC-TGGTTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----ATA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----AC-A--C------GCTAG-ATTGAAA-CACAGAA---CAGACATTCCTA-AAT--AAACAACA--------CTGGCGAC------------ATT-GGA-TTTTTATATATTT----TCTTC-AC-TTTC-GAAAGAGTTA-T--TTAA-GAAA-TAAC--AATAAAGA-T--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTTAAAT--------ACA-TC-TAATT---ACGTAG-TTGA-TACA-ATTA--CT---TTACATACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATAC-AGGGGGAATGga
gi|9 : CAGCCATTCT---CCCG----CAAAA--GG-GTAAA-T-gc
gi|9 : ACTGACGG-----AA-CCT---ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-GC---ATG-CT-CTA-----------AG-----GACGACGTG--G-TTC--TTTAGTTTT-TGGTAGACAT-GTATTA-CAAGGGT-GAAAAA-CA-TT-GACAGTTTTAGATACGTTGT-CAAAAA-G-TTAA--A-----TAT--ATCCA-------TAG-----Annnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaactgacggaacctattaattaccctgttacggaacatagcatgctctaaggacgacgtggttctttagtttttggtagacatgtattacaagggtgaaaaacattgacagttttagatacgttgtcaaaaagttaaatatatccatagatgattaaatgttttacgataaagtatgc
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|25 ): GGACTTAAAATCTGTTATCTTTTATCTTTCGAGATGAATTCAATAAAGTCAATCATATGTAAAAGCAATG
Unaligned ( gi|31 ): GGATATATAGATTATTTTAATAGATCAACA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 1111 11 1 111 11 1 333 11 1111 11 1 111 1 222222222 1 1 111 1 111 44444444444 1 11 44444 333 11 333333333 6666666666666666666666 2 333333333333333333 111 11 666666666666666 11111111111111 2222222 3333333 1 1111 1 11 1 1111 1 11 1111111111 11 3333333333333333333333333333333333333333333 22 1 22222 22222 11 111 11 111 1 1 1111 11 111 111 1111 11 111111 111 1 44444444 111 11 2222222222 111 11 111 111 3333 11 1 11 66666666666666666 222 666666666666666666 1 22 111 11111 111 22 2222222222 111 111 1 1 1 111 222222222222 22 1 1 111 1 1 111111 1111 22222222 1 22 11111 2222 111 111 2222222 1 1 1 11 111111 11111 333333333 22222222222 111 2222 1 11 11 44444444444444 111 111 1 11111 11111 111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111 11 3333333 111 1111 11111 1111 11111 1 11 7777777777777777 1 11 33333333 2 11 2222222 2222 111 22222222 1111111 1111 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 22222222 111 111 11 1111 1111111 1 111 2222 111 22 111 222222222222 11111 111111 11111111111 33333333333333333 333 111 22 111111 1 11111 1111111 22222222222222 222222 22222 2222222222222222 111 111111 222222222 1111 11111111111 1 22 22222222 4444444444444 1111 1111 1111 1111 2222 1111111 444444444444 2222 111 111 2222 1 11 111
lowQualScore : 4444 7777 8 11 8 8 8 5 1 111 33 0 222 00 4444 33 0 777 0 444444444 0 0 777 0 777 3 22222222222 0 3 22 11111 8 111 11 8 8 222222222 8 6666666666666666666666 8 0 999999999999999999 3 999 8 11 0 8 1 6 6 99 6 6 6 666666666666666 88888888888888 99 1 1111111 0000000 0 8 7777 11 0 8 0 8 8 11 1 0 6 8 0 8 8 9999 8 8 8 8 8 8 6 11 88 8 8 0 9999999999 33 7777777777777777777777777777777777777777777 1 1 88 6 8 8 00000 00000 8 8 11 8 8 111 88 8 77 8 8 8 8 0 444 6 0 7777 8 11 88 8 0 444 8 88 444 8 9999 0 11 8 8 888888 0 8 111 0 44444444 444 1 8 8 0 88 44 8 99 99 99 2 6 99 0000000000 88 88 8 3 000 33 777 111 9999 33 0 33 55555555555555555 333 55 333333333333333333 0 33 8 444 33333 11 333 6 11 1 99 6 6 99 6 6 3 1111111111 99 6 6 6 888 0 8 0 444 0 3 6 5 5 99 2 000 6 6 6 5 333333333333 11 0 888 6 6 1 1 5 5 5 5 77 000 5 1 5 5 9 2 0 0 5 444444 2222 00000000 7 5 66 1 77 555 1 77 5 1 55 77 33333 1 7777 1 111 6 000 6 0 4444444 0 0 5 0 33 444444 5 66 5 888 66 5 00000 5 5 5 777 5 333333333 9999 66666666666 5 5 77 5 5 000 6 1111 77 5 66 5 5 88 66 0 5 11 66 5 55 888 88888888888888 66 333 000 0 1 99999 5 99999 5 77 555555555 5 0000000000000000000000000000000000000000000000000000000000000000000000000000000000 5 77 1 5 5 88888 1 11 5 5 4444444 0 000 7777 5 8888 5 77777 5 8888 5 5 5 6666 22222 5 5 5 5 5 5 5 1 999 666 5 11 0000000000000000 6 7 3 6 6 55 3 99 6 6 6 6 11111111 0 0 77 4444444 3333 111 00000000 9999999 4444 6 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 00000000 5 000 2 77 000 5 5 22 77 77 5 77 5 1 5 0000 66 4 7777777 4 4 4 4 2 4 111 4 4 55 2 6666 0 777 111 00 4 4 222 4 000000000000 00000 4 4 55 55 4 777 4 4 4 222222 4 44444444444 11111111111111111 4 4 7777 222 4 9999 1 222 7 8 88 4 777777 777 4 0 4 0 99999 5555555 22222222222222 77 111111 5 00000 2222222222222222 555 444444 5 66 666666666 5 0000 99999999999 7 5 888 0 5 44 4 00000000 7777777777777 5 5 6 4444 6 6 8888 9999 6 6 77 1 6666 0000 6 6 99 3 5555555 222222222222 5 5 6666 6 6 6 77 000 77 000 5 0000 77 5 5 77 6 77 1 5 6 6 33 5 6 6 444
lowQualScore : .... .... . .. . . . . . ... .. . ... .. .... .. . ... . ......... . . ... . ... . ........... . . .. ..... . ... .. . . ......... . ...................... . . .................. . ... . .. . . . . . .. . . . ............... .............. .. . ....... ....... . . .... .. . . . . . .. . . . . . . . .... . . . . . . . .. .. . . . .......... .. ........................................... . . .. . . . ..... ..... . . .. . . ... .. . .. . . . . . ... . . .... . .. .. . . ... . .. ... . .... . .. . . ...... . . ... . ........ ... . . . . .. .. . .. .. .. . . .. .......... .. .. . . ... .. ... ... .... .. . .. ................. ... .. .................. . .. . ... ..... .. ... . .. . .. . . .. . . . .......... .. . . . ... . . . ... . . . . . .. . ... . . . . ............ .. . ... . . . . . . . . .. ... . . . . . . . . . ...... .... ........ . . .. . .. ... . .. . . .. .. ..... . .... . ... . ... . . ....... . . . . .. ...... . .. . ... .. . ..... . . . ... . ......... .... ........... . . .. . . ... . .... .. . .. . . .. .. . . .. .. . .. ... .............. .. ... ... . . ..... . ..... . .. ......... . .................................................................................. . .. . . . ..... . .. . . ....... . ... .... . .... . ..... . .... . . . .... ..... . . . . . . . . ... ... . .. ................ . . . . . .. . .. . . . . ........ . . .. ....... .... ... ........ ....... .... . ..................................................................................................................................... ........ . ... . .. ... . . .. .. .. . .. . . . .... .. . ....... . . . . . . ... . . .. . .... . ... ... .. . . ... . ............ ..... . . .. .. . ... . . . ...... . ........... ................. . . .... ... . .... . ... . . .. . ...... ... . . . . ..... ....... .............. .. ...... . ..... ................ ... ...... . .. ......... . .... ........... . . ... . . .. . ........ ............. . . . .... . . .... .... . . .. . .... .... . . .. . ....... ............ . . .... . . . .. ... .. ... . .... .. . . .. . .. . . . . .. . . . ...
lowQualScore : 8888 0000 0 00 0 0 0 5 0 000 88 0 888 22 8888 88 0 555 0 888888888 0 8 000 0 000 2 88888888888 0 2 55 22222 0 000 00 0 0 000000000 0 0000000000000000000000 0 0 000000000000000000 8 888 0 00 8 0 4 7 7 88 7 7 7 777777777777777 88888888888888 22 0 7777777 4444444 6 0 0000 88 6 0 8 0 0 00 4 0 0 0 8 0 0 8888 0 0 0 0 0 0 0 00 88 0 0 8 7777777777 88 5555555555555555555555555555555555555555555 0 4 44 0 0 0 00000 88888 0 0 00 0 0 000 88 0 44 0 0 0 0 8 000 0 6 0000 0 00 88 0 8 000 0 88 000 0 8888 8 00 0 0 444444 8 0 888 6 44444444 000 4 0 0 8 88 00 0 22 22 22 5 7 22 8888888888 88 88 0 8 000 22 555 000 0000 88 0 88 88888888888888888 222 88 000000000000000000 0 88 0 888 00000 66 888 7 77 0 22 7 7 22 7 3 7 8888888888 88 7 7 7 333 8 0 8 000 8 3 7 5 5 22 5 888 7 7 7 0 666666666666 66 6 333 7 7 7 4 7 7 7 7 99 000 7 0 0 0 8 0 0 0 0 444444 4444 66666666 3 0 99 7 99 999 3 99 7 4 00 99 11111 0 7777 7 777 7 000 6 1 6666666 0 8 0 0 22 444444 0 99 0 888 11 1 11111 0 0 0 222 0 111111111 4444 88888888888 7 7 99 7 7 000 6 0000 55 0 99 0 0 11 99 0 0 99 99 0 44 888 11111111111111 99 000 000 6 7 33333 7 44444 7 99 666666666 7 6666666666666666666666666666666666666666666666666666666666666666666666666666666666 7 99 4 7 7 44444 4 66 7 7 3333333 6 000 3333 7 0000 7 55555 0 1111 0 0 0 9999 22222 0 0 0 0 0 0 0 4 666 000 7 00 2222222222222222 7 3 3 7 7 88 5 22 7 7 7 7 00000000 7 0 55 8888888 8888 777 55555555 2222222 2222 7 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 77777777 7 000 3 99 000 7 7 44 99 99 7 99 7 4 0 6666 11 4 7777777 0 0 0 0 0 0 000 0 0 55 6 5555 8 000 000 00 0 0 555 0 888888888888 00000 0 0 55 55 0 000 0 4 4 888888 4 33333333333 22222222222222222 4 4 9999 222 4 4444 9 222 7 9 22 4 222222 888 4 1 4 0 66666 8888888 44444444444444 99 000000 7 00000 4444444444444444 666 444444 0 99 999999999 0 6666 66666666666 4 0 888 7 7 77 9 77777777 9999999999999 7 7 7 2222 7 7 5555 8888 7 7 99 7 8888 8888 7 7 88 2 3333333 444444444444 7 7 3333 7 7 7 99 000 99 000 7 0000 99 7 7 99 0 99 7 7 7 7 66 7 7 7 666
consensus : CAGCCATTCT---CCCG----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAANGCAAA-A-TTT--GAA-GTAG--TGGAGTAGG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----G-AC-ATG-TTGNTGT--ACAT-AATTT--GAAAGTTTTCGCCACA-C------C--TAG-CATAGATTGAT-CACAATCATACACTGACGGCAAACAA-CCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-GC-CGATG-CTGCTA-----------AG-----GACGACATN--G-TTC--TTTAGTTTT-TGGAAGACAT-GTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TGT-CAAAAAGG-TTAC--A-----TAC--ANCGA-------TAA-----AAGTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATTGTGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGG--TG-TAA-GTAA-CAAG----GA-A--TAAA--TGGT-------------TACT----------------------GCGATTTTCAGAAAA-TG-ACGCT-T-A-----GGTA---TAAG-C-AC--TCTG-T-T-G-TTACGGA-AAATAGT-TA-GTTCT-AGT-A-T-GAAACA---TTA-AATTTAAACC----ATT-TT--T-TCTTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--AACA-TAAAA--GAGAAACAATAT------TAAAA---AAAGTAAATT-TA-TCAAAAGAAAAAGAG-AAAATA-G-TG--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATGATAACT-TTAATAATTTT-AACTTC-ATGTACA-T-AT-ATAT---GCA-T-TATTT-A-ACT--TGCCC-TTA--GTCTAAG-T------------AAATATG-A-TGTGACTT--G--TGTG---------CA-CT--ACACAC-CT--AAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATANAGGTTTG--ATCG-TTA-CGG--TAA-ACGGGATG----TACA-GAACGGAAACACAGAATACACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAGGCT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-TTTTTCAGTGAAAA-A-CAGAA-AA-GGTTGGAAAAG-AATATG-C-TTC-C--GT---AAC-AGTAAATNAAAATTTCCAATGCTATTCT-GGCAATTA-ATTTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-G------TATTTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TA--TTG--TTAAAA-TTGGCT-AGTATT---TT-TTTTT---AANAAAA------CT-ATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGACAAAAC---GTTTC-G-T-GAA-CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---ANTGT-A-TGTC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGC-CAATT-TAAA-ATA---TT------------CTTTTT--ACA-ATT---ATTTTAAAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-NAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAAAT-AAAC-TTCAACAGAGG--CT-ATTTT-TAT-CG-ATGA-------ATGAAGGA---AAA-T--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-GTTACGGA-A-TGTT-G-ACG-TTAACGG---------A------GATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTACCAAT--CATAACGTAATGTTTA-AT-AAAAA---CGTTG-T---ATCTGGTGAGGTACA--G-G-GTACC-------G---CTA----TT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AT----------------ACA-------------TAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-NACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCAAGAAT--T-TG-C-C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAATAAAAACCAAAAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTT-A--C-A---C-A----TAA---AATT-CATTAAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----NTA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----ACAA--C------GCTAGAATTGAAA-CACAGAA---CAGACATTCCTA-AATA-AAACAACA--------CTGGCGAC-----------AATT-GGA-TTTTTATATA-TT----TCTAC-AC-TTTCGGAAAGAGTTATT--TTAA-GAAA-TAAC--AATAAAGATT--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTT--AT--------ACA-TC-TAATTA--ACGTAG-TTGA-TACA-ATTA--CT---TTACGTACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTCCTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATACAAGGGGGAATG
Reference ( family-1054 ) : CAGCCATTCT---CCCG----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAANGCAAA-A-TTT--GAA-GTAG--TGGAGTAGG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----G-AC-ATG-TTGNTGT--ACAT-AATTT--GAAAGTTTTCGCCACA-C------C--TAG-CATAGATTGAT-CACAATCATACACTGACGGCAAACAA-CCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-GC-CGATG-CTGCTA-----------AG-----GACGACATN--G-TTC--TTTAGTTTT-TGGAAGACAT-GTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TGT-CAAAAAGG-TTAC--A-----TAC--ANCGA-------TAA-----AAGTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATTGTGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGG--TG-TAA-GTAA-CAAG----GA-A--TAAA--TGGT-------------TACT----------------------GCGNTTTTCAGAAAA-TG-ACGCT-T-A-----GGTA---TAAG-C-AC--TCTG-T-T-G-TTACGGA-AAATAGT-TA-GTTCT-AGT-A-T-GAAACA---TTA-AATTTAAACC----ATT-TT--T-TCTTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--AACA-TAAAA--GAGAAACAATAT------TAAAA---AAAGTAAATT-TA-TCAAAAGAAAAAGAG-AAAATA-G-TG--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATGATAACT-TTAATAATTTT-AACTTC-ATGTACA-T-AT-ATAT---GCA-T-TATTT-A-ACT--TGCCC-TTA--GTCTAAG-T------------AAATATG-A-TGTGACTT--G--TGTG---------CA-CT--ACACAC-CT--AAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATANAGGTTTG--ATCG-TTA-CGG--TAA-ACGGGATG----TACA-GAACGGAAACACAGAATACACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAGGCT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-TTTTTCAGTGAAAA-A-CAGAA-AA-GGTTGGAAAAG-AATATG-C-TTC-C--GT---AAC-AGTAAATNAAAATTTCCAATGCTATTCT-GGCAATTA-ATTTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-G------TATTTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TA--TTG--TTAAAA-TTGGCT-AGTATT---TT-TTTTT---AANAAAA------CT-ATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGACAAAAC---GTTTC-G-T-GAA-CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---ANTGT-A-TGTC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGC-CAATT-TAAA-ATA---TT------------CTTTTT--ACA-ATT---ATTTTAAAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-NAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAAAT-AAAC-TTCAACAGAGG--CT-ATTTT-TAT-CG-ATGA-------ATGAAGGA---AAA-T--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-GTTACGGA-A-TGTT-G-ACG-TTAACGG---------A------GATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTACCAAT--CATAACGTAATGTTTA-AT-AAAAA---CGTTG-T---ATCTGGTGAGGTACA--G-G-GTACC-------G---CTA----TT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AT----------------ACA-------------TAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-NACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCAAGAAT--T-TG-C-C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAATAAAAACCAAAAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTT-A--C-A---C-A----TAA---AATT-CATTAAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----NTA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----ACAA--C------GCTAGAATTGAAA-CACAGAA---CAGACATTCCTA-AATA-AAACAACA--------CTGGCGAC-----------AATT-GGA-TTTTTATATA-TT----TCTAC-AC-TTTCGGAAAGAGTTATT--TTAA-GAAA-TAAC--AATAAAGATT--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTT--AT--------ACA-TC-TAATTA--ACGTAG-TTGA-TACA-ATTA--CT---TTACGTACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTCCTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATACAAGGGGGAATG
gi|1 : AGCCATTCTTCTCCCGAAAAC-AAAAAGG-GTAAAATGTAATTTTCAGAAAAACCCGCAAA-A-TTTCGAAA-GTGGATTGGAGTAGG-A--AACTGAAAAGTTAAA-TAAATGGAAAAAGAAAG----G-AC-ATGATTGATGT--ACATTAATTTTTGAAAGTTTTCGCCACA-TATACCAC--TAG-TATAGATTGAT-CACAATCATATACTGACGG-----AA-CCT---ATT--A-ATTACCCTGTT-ACGCCAGCGGGGGAAC-A--------------TA-GC---ATG-CT-CTA-----------AG-----GACGACATTTGG-TTCCTTTTAGTTTT-TGGTAGACAT-GTA--A-CAAGG--TGAAAAAACA-TTCGACAGTTTTAGATACGCTGT-CAAAAAGGCTTAC--AGTATATGC--ATAGAATGTTTTTAACGGATAGGTATGCAACT-A-----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-TTGATGAAATGTGTA-AATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAATCAGT-TCGTAGAATATGCAGAGC-AAAAACATGTTTGATTGTCCATTT-GTGCATGG--TGTTAA-GTAA-CAAGTCGAAA-A--TAAACCTGGT-------------TACTTTCTGGTTTAAAAAGATGAGTAGCGACTTTCAGAAAAGTGAACGCT-T-AAACTTGATAGGTTAAGTC-ACTTTCTG-T-T-GTTTACGG--AAATAGG-TATGTACTCAGT-A-T-GAAACGACCTTA-AATCTAAACCATAAATT-TT--T-TCTTGTTTTCGTCCT-TGT-TTGATATATCGGGCAA-AATTTTTCATTG--TTGGAATA-ACAGAAAATAGAAAAGAACA-TAAAAAGAAGAAACAATATTTCCAATAACA---AAGGTTAATT-TAGTCAAAAGAAATAGAGAAAAATA-G-TGTCGAAATTTCTA--AAACTG--T-AA--CAATTTAAAATC-C----ATGATAACT-TTAATAATTTTAAACTTCAATGTGCA-TAATAATATTCGGCATT-TATTTAA-ACTGGTGCCC-CCG--GTCTAAA-TAAGTCTTCAGTAAAATATG-ATTGTGACTT--GTTTTTG---------CATCTTAACACACTCT--AAAGATTGA--TATA--GATCTC-TAAAGAGCATATACAG--TTG--ATTG-TTA-CGGAATAACATGGAATGATTTTACG-GA----AAACATAGAATACACTTTGAT-AAATCCA-ATA---AATA-TG-CTCAAGAGTAATAAAGTTTA--TATCAAATGCTTCTCAATTCATTT-CTCT-TCA-TCGTCCTTTTCAGGCTTAGTCAA-ATGA-C-ATGAAGAATTGTT---AGAGAAAAAAATAGGTGTTTTTTCAGTGAAAA-CTCAGAA-AAGGGTTGGAAGAGAAATATG-CATTCGC--GTGAAAAC--GTAAATCAAAATTTCCAATTATATTCT-GGCAATTG-AATTGATTTTCCA-TGCATT-ACT------CTAACACAGTA--CGCGTAAATAA------TATTTTAA-GA--TTCATACAA-A-AGAAAATTGT-CATAGTAT-TTG--TTAAAATTTGACTGAGTATTTCCTT-TTTCT---AAAAAAA------CTGATCAT-TCACGTAA-CGTGAT------TA-TAAG-TCC---AT--ATAACAAAACTTTGTTCT-G-TAGAATCA-TCGCTATATATCCTTA--A-ATATTTTCTCG--G-A-CTTTG--TGTC-TACA-AAG---ATTGCAA-TGTC-AA-ATTT--TAAT-TCAT--AAGT--AGTTCA-CAGAATTGG--CGATTATAAA-ATAGCTTT------------GGTTTT--AGC-ATT---ATTTGAATATA----AAC-AGT---C-AT--A---T---ACTACGAG-ATCAATA--------T--C----TGTACATGTT---ATCTTGTCA------A-----------TCAGATTATGC---------------G-CCA--TAAAAC-AAAC-TTCAACATGGG--CT-ATTGT-TAT-CG-ATGA-------ATGAAGGA---AAA-TA-AGT-GT--T-GG-CAGA----AAA-CTAAT----TG-C-TGCG--TTTTTGTAAAA-GGTTGCCTATCGGACTTTT-C-AGATGT-CCAGTTACTGA-ATTATT-G-ACG-TTTACGGCTGATATATA------GATTAATTTTTAATATA-TC-AC-A-CTTTCACAAT-TAGTTTTGTACGAGGGCAT-CCGGTGAG-CATG-T----AGTGTTGAGATGACGGT-C--AT--CATAACGTAATGTTTAGAT-AAAAAAATCGGTG-----ATCTGGTGAAGTACA--GTG-GTACCTCGGGTGG---CTA----TTTGTTGCTCCTGGGAAC-AAATGGCTGCTTTTTGG------------------------AA-A-----------------ACA-------------TAC--GTTCCTTTAATACAAGACATGGAAGT-TTTAAAAACATTGATTTGT---T-GAAACTGCTAACCGTACAA--TTTCTAATAGAAGAT--GTAATCAA-TTAAATT----TTGTCAAAAAT--T-TG-CAA--AA-TCA-AATTGAT-GTTAA-GAG--ACCC-A-C--AGAATAGATAACAAAAAT---TATTTACATCCCAGCATTTGCAGC-TAAACTA-GTGTG-AAGA--T----AAAA-----ACA-CGTT-AA--G--GA-A---T-CAGC-A------ACAATG----T--TAA-TAAGCGT-CC-AG-----GTTTCC-ATTTT-A--C-AGCCC-A----TAA---ATTT-CA-TAATCTCC------TTGATTTTGGGAGT-TGATTT-TCATTCGTAAGT---ACATATCAA--A--CAAAC----ACCA-----TCCATA-----CTAGTTATC-----GAAAAGAAGAGAATCAG-----GCGCGTTT------C-TAAAT---------AAAGATA-GAGTAAGAA--CAGGGCGGCTAGATCTGAAA--AT---A---CAGAGAT-------GGA-GACCAACACTTGGGGCCTGGCGAC-----------ATCT-GGA--TGTTATATA-TT----TCTAC-AC-TGTTGGAAAGAGTTATT--TAAA-GAAAGTAAC--AATAAAGAT
gi|10 : A-TTAAATT----TTGTCAAGAAT--T-TG-C----AA-TCA-TT-TGAC-G-TAA-GA---ACCC-A-C--AGAATAAAA--CAAAA-T---TATTTACAT---AGTTTTG-CA-C-TA---TA-GTGTG-A--AA-T----AAAC-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATA----A--T---TATGCGA-CA-GG-----C----C-ATTTT-A--C-AT--C-A----TAA---A-TT-CAT-AAT-TCC------TTG---TTGGGAGC-TGAATT--CA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----CTG-TTATG-----GAAAAA--------CAT-----CCG---TT------C-T--AT---------AAAGTTA-G----AC-A--C------GCTA-AATTGAAA-CACAGAA---CAGACATTCCTA-AAT--AAACAACA--------CTGACGAC------------ATT-GGA-g
gi|11 : TTTCAGAAA--TG-ACGCT-TTA-----GGT----TAAG-C-AC--TCTGGT-T-G-TTACGGA-AAATAGT-TT-GTT-T-AGT-A-T-GAAACA---TTA-AATTTAA-CC----GTT-TT--T-TCTTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--AA---TAAAA--GAGAAACAATAA------AAAAAAAAAAAGTAAATT-TA-TC-AAAGAAAAAGAG-AAAAAATG-TG--AAAATT--TA--AAACTGACT-AA--CAATTCGA---C-C----ATGCTAACT-TTAATAATTTT-AACTTC-ATGTACA-T-
gi|12 : atggcactggttttcagataatacgaA-------------CAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-AACC--ACAG--TTTCTGATAG-AGAT--GT-AGCAA-TTAAATT----TTGTCAAGAAT--T-T--C-C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-T--AGAAT-AAAAC--AAAAT---TATTCACAT---AGTTTT-GCA-C-TA---TA-GTGTGAA--A--T----AAAA-----GCA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATA----T--T---TAAGCGA-CA-TG-----T----C-ATTTT-A--C-AC--C-A----T-G---AATT-CA-TAAT-TCC------TTG---TTGGGAGC-AGATTT-
gi|13 : gttagacaatatgcctttaagcaagCCTG-AATA-AA-CAAAA--------CTGGCGAT-----------A-CT-AGA-TTTTTGTAGA-TT----TATAC-AC-TTT-GG----------------A-CAAA-TAACATAATAAAA--T--GTCTCGAACTT------T-TAG-TTTTATGTTC---A-TTTC--AC--------ACA----TAATC---GTGTAG-ATGA-TACA-ATGATTTT---TTATGCAAAAAAA--CTTTCA----GA-ACTT----A--AAA-TCTG-TTA---TCCTTT--ACTTTCGA-CATG-A-AT--TCA-ATA-AAAGTCAACC-ATATGTAAAGG
gi|14 : AT-GTATTA-CAAGGGT-GAAAAA-CA-TT-GACAGT---------------CAAAAAG--TTAC--A-----TAC--AACGA-------TAA-----A-GTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATT-TGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGG--TG-TAA-GTAA-CAAG----Gcaatg
gi|15 : -C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAATAGGAT---AAAAT---TATTTACAT---AGTTTTG-CA-C-CG---TA-GTGTG-A--A--A----TAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AA-GG-----C----C-ATTTT-A--CAA---C-A----T-A---AATT-CA-TGAT-TCC------TTG---TTGGGAGG-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAA
gi|16 : AG-A--ATCGTAAAT-A------CGTTTTGA--A--TTCTT--AA-A-AGAAA--TGC-CGTA-TAA-TTG--TT-----TTG------TACT---TCCTTTTT---AAGAAAAAAACCCCT-ATGTTCTC-GGTAATC------------A-T--C-TCCCGGAC--ATAACAAAG----GTTTC-G-T-GAA-CA-TTG---------CTAA--A-
gi|17 : --------ACA-TC-TAATTA---CGTAG-TTGA-TACA-ATTA--CT---TTACATACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATACA--GGAGAATG
gi|18 : gAA-A-CAGAA-AA-GCTTGGAAA-G-AATATG-C-TTC-G--GT---AAC-AGTAAATCAAAATTTCCAATGCTATTTG-GACAATTA-A-TTGA-TTTGTA-AGCATT-ACT------CTATCACAG-A--CTCATAAAT-A------TATTTTg
gi|19 : T--ATGA-GAAAC---GTTAA-G-T-GAA-CA-TCA--------C-TAA--T-AT--------ACCG-A-CTTTG--TGTA-TAAA-TA----AATGTAA-TGTC-AA-TTTT--C-AC-TCAT-AATGT--AG-TCG-C--AATTGG--CAATT-TAAG-ATA---TT------------CTTTTT--ACA-ag
gi|2 : CAGCCATTCT---CCCG----C-AAA--AGAGTAAA-T-TAATTTTCAGAAAAAAAAGCAAA-AGTTT--GAA-GTAA--TGGAGTAGGGA--AACTGAAAAGT--AAATAAATG---AAAAAA-GACAGG-ACCATC-TTGTTA---ACAT-CATTT--GAAAGTTTTCGCCACA-C------CACTAGGTA-AGATTAATGCACAATCATACA-TGACGG-----AA-CCT---ATTCAACATTACCCTGTT-ACG---------GAAC-AATACTTGTACATTGTA-G---GATGGCT-TTA-----------AG-----GTCGACATC--GGCTC--TTTAGTTTTATGGAAGACAT-GTATTA-CAAGGGTTTGAAAA-CA-TT-GACAGTTTTAAATACG-TTTTCAAAAAGA-C-ACTGA-----TACCCATAGA-------TAATT---AAATGTACA--T-AGTATACGATAAGT--AA-AATGTTATTTC-CGTTTTTTGTGA--AAATGTGTACAATTTTTATCACTGTACTTCTTTTTCTCATATTATTGAAAT-AGT-TC----AATAT-CAGAGTTAAAAACAT-TTTGA-TGT-CATTT-TTGGATGT--TT-TAAAGTAAACAAG----GA-AAATAAA--TGGTAAGGGTTTTCAGATAAT----------------------ACGATTATCAGAAA--TG-GCGCTAT-A-----GGTT---TAAG-C-AC--TCTG-TCT-C-GTACGGA-AAATAATATT-CTTCT-AGT-A-TCGAAACA---TTAGAATTTAGACC----ATTATT--TGTATTG-TT-CG---T-TGTCTGAA---ATC-TGCAACA--TCTTAATTGGCTTG-AATA-ACAG-AAATAGCGA--A-CA-TAAA---GAGAA-CAAT--------TAGAA---AAAGTAAATT-TA-TCAAAAGAAAAAGAG--AAATT-G-TG--AAAATT--TA--AAACTGACT-AAACCAATTCAA---C-CATAGATGATAACCATTAATAATTTT-AACTTC-AAATACATT-AT-ATAT---GCA-T-TAATT---ACA--TGCCC-TTAATGTCT-TG-T------------AAATATG-A-TG-GACTTGGG--TGTGGTGTTGTGCCA-CTA-ACAAAC-CT--AAAGAT--A--TAT-AGAA-CTCATAGA--GCATATACAGGTTTGAAATCG-TTA-CGG--AAA-AC-AGATG----T-----TACGGAAACAT----TA-GCTTTG-TGAATCCCACAGTAAAAATATTGCCTCAAG-G---TAGAGTTTGTCTACAAAATGCTTCTCAATCCA-TT-CTCT-TCA-TCGTC---TTCAGGCT--ATCAA-ATGAGCGATGAAA-AC--TGGGAG---AGAAAAATA--TG-TTTTTCA-TG-AAA-A-CAGAA-AA-GGTTGG--AAG-AATATGCC-TTC-C--GT---AAC-AGTAAATAAAAATTTTC-ATGGCA-TCT-GGCAATTA-ATTCGAGTTTGTA-TGCATTAACTCTAGAGCTGAT-CAG-ACTCTCGTACAT-GTAAAATTATTTTTA-GA--CTC-T--AAGA-AGAAA--TGT-CATA-TAGTTTG--TTAAAT-TTGGT---GTA------T-TTCCT---AAAAAAT------CT-AT-TT-TC-CGTAA-CGGGAT------TA-T--G-CCC---TA--ATGACAAACA---GTTTCTG-T-G-A-CA-TCG---------CTAA--ATAC--------G--GAA-CTTTG--TGTC-TAAA-AAA---GACGTCA-TGTCAAA-ATTTGAT-ATCTCAT-AAAGT--AGATCACC--AATT-GC-CAATT-TAAA-ATA---TA------------A--TTT--AC--ATT---ATTTT-TAATA-----AC-A-----C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-TGC---CT---GT-------------AT----------TC------TGTCAATCAGATTATGCGG-CCA--T-AAAT-AAAC--TCAACAGAGG--CT-A--TT-CAT-CGAATGA-------ATAAAGGA---AAATT--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TGTT-TG-A--GAGGTGT---ACGG-TGCCTATCGGACTTTT-CAA-AT-T-CC-ATTACGAA-T-TATT-G-ACG-TT-ACGGTATATAGT-A------GGTT-A-TTTTAATAGA-TCAACAA-CTTTCA-AA--TAA-TT--TACGA-GACAT-CCGGTGAA-CATT-TAATGA---TTGACATG-GAGTACCA----TATAACGTAATGTTTA----AAAAA---CG-TG-T---ATCT------GTACAGCG-G-GTACT-------G---CTA----AT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AC----------------ATAGTCTAAACAAGAGTATTGG------------AAGA--------T-TT---AAACATT--TTTGTTGAT-GAAA-TGCTTACC--ACAA--TTTCTGATAG-CGAT--GT-ATCAATTTAAATT----GTGTCAAGAAT--TATG---C--AA-TCA-AA-TGAC-GTTAA-GA---ACCC-C-A--AGAATTAAAAC--AAAATTAATATATACAT---AGTTTT-GCA-C-TA---TA-GCGTG--------------AA-----ATA--------------A-A---T-CA-T-A------AC-ATG----T--T---TAAGCG--AC-AG-----G----C-ATTTTCG--C-ATCCC-A----TAA---ATTT-CA-TGAT-TCC------TTG---TT-GGAGC-TATTTT-CCA-TCGTAAGTTAAA-ATATCAA--A--CAAA-----A-CATGGTTT--ATAC----ATA-TTATG-----AAAAAA--------AAG-----CCG---TT------C-T--ATAA-------AAAGTTA-G----ACGACCC------GCTAG-ATTGAAACCACAGAA---CAGACATT-CTA-AAT------AACA--------CTGGCAGC------------ATT-GGA-TGTTTG-ATG-TT----TCTAC-AC-TTT--GGAAGAGTTA-A--TTAA-GAAA-TAAC--AATAAAGA-T--GCCTGGAAATTG----GC-T-G--TTTATG-TT---A-C-TT---T--------ACA-TCTTAATT---ACGTAGATTGAGTACC-AATA--CT---TTACATACAAACG--TTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTTCTTT--ACTAGCGACCATG-A-AT--TCT-ATAT
gi|20 : AAAATTTCCAATGCTATTCT-GGCAATTG-GTT-GA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-A------TA-TTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TAT-TTG--TTAcatattacagaaagtg
gi|21 : CACAC-CT--AAAGAT--AACTATAACG----C-TAGAG--CTTAAATAGGCTTG--ACCG-TTA-TGG--AAA-ACAGAAAG----TT-----ACGGAAATATAGGGTAAACTTTG-T-AATCCCA-AGT---AA
gi|22 : TGTCAAGAAT--T-T--C-C--AA-TCA-AC-TGAC-G-TAA-GA---ACTC-A-C--AGAATAAAATC--AGAAT---TATTTACAT---AGTTTT-GCA-C-TT---TA-GTGTGAA--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-a
gi|23 : ---AATAAAAG-----TT-AT-TT-TC-CGTAAC-GGGATGACATGTA-T--G-TCC---AT--ATGACAGA-C---GTTTC-G-T-GAG-CA-TCG---------CTAA--T-AT--------
gi|24 : GCTTCTCAATCCA-TTTCTCT-TCAT-CATC--TTTTAGGCT--AACAA-ATGA-C-ATGac
gi|26 : TA--TC---TCATGTACAAATA--TTTTCAA---GA-ACTCGATCA--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-Ctgttttcagtgaaaacagtac
gi|27 : --AATAAAGAT---GCTTGGAAATTG----AC-T-G-TTTTAGGTTT---A-C-TT---T--------ACA-TC-TAATT
gi|28 : AG-----AAA-CTATT--C-TG-C-TG-A--TTTTTA----A-GG-TGCCTATCGGACTTTT-C-A-AT-T-C
gi|29 : G---TT------C-T--AT---------AAAGTTA-G----AC-A--C------GCTAG-ATTGAAA-TACAGAA---CAAACA
gi|3 : CAGCCATTCT---CC-G----C-AAA--GG-GTAAA-T-TAATTTTC-GAAAAAAATGCAAA-A-TTT--GAAAGTA---TGGAGT-GG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----GTAC-ATG-TTG-TGT--ACAT-AATTT--GAAAGTTT-CGCCACAAC------C--TAG-CATAGATTGAT-CACAATCATACACTGACGGCAAACAA-CCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-AT-CAATG-CTGCTAGAGCGGAAACCAGTACTCGACGACAT---G-TTC--TTTAGTTTT-GGAAAGACATTGTATTA-CAAGGGTTGAAAAA-CA-TG-GACAG-------------AT-CAAAAAG--TT-C--A-----TAC--AACGA-------TAA-----AAGTATGCAACTCAG----CGAA--GCTCAATAGTATTA-CTCTCGTTTTT-GTGA--AATTGT-TACAATT-TTTCTACT-TACTTCTTTTTCTCAAATGATTGAACT-AGTATC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTTCGTG-ATGG--TG-TAA-GTAA-CA-G----GA-G--TAAA--TG---------------TACT----------------------GTGTTTTTCAGATA--TG-ACGCT-T-A-----GGTA---TAAG-C-AC--TCTG-T-T-G-TTACGGAGAAATAGT-TAAGTTCT-AGTCA-T-GAA-CA---TTACAATTTAA-CC----ATT-TT--T--CTTG-TTTCG---TATGT---GA---ATC-GCCAA----TCT-AATTG--TTGGAATACACAG-AAATA---A--AACA-TAAAA--GGAACACACT-T------TAGAA---AAAGTAATTTATA-TCAAAG--AAAAGAG-AAAATA-GGTG--AAAATT--TA--AAACTGACTTAA--CAATTCAA---C------ATAATAAAT---AATAATTTT-AACTTC-ATGT-CA-T-AT--TAT---GCA-T-TATTA-ACACT--TGTCC-TTA--GTCTA-G-T------------AACTATGCA-TGTGACTT-----TGTG---------CA-CT--ACACAC-CCTAAAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATAAAGGTTTG--ATCGATTAACGG--TAA-ACGG--TG----TACA-GAACGGAAACACAGAAT-CACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTT-TCAGTCCA-TT--TCTATCATTCGTC--TTTCAAGAT---TCAACATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-CTTTTCAGTGAAAG-A-CAGAA-AA-GGTTGGTAAAG-AATATG-C-TTC-C--GT---AACCAGTAAAATAAAATTTCCAATGCTATTCT-GTCAATTACATTTGA-TTTGTA-TGCATT-ATC------TTGACACAG----CTCG-GAAT-G------TATTTTTAAGA--TTCAT--AA-C-ATAAA--TGTTCATACTA--ATG--TTAATA-TTGGCT-ATTATT---TT-TTTTT---AATA----------T-ATCTT-TCGCGTAACCGGGAT------TA-T--G-TCC---ATCAATGACAAAAC---GTTTC-G-T-GA--CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---AATGT-A-TAT--AA-ATTT--T-AT-TCAT-AAAGT--AG-T-A-C--AATTGGG-CA--T-TAAA--TA---TT------------CTTTTT--ACAGATT---ATTTTAAAATAT---CAC-A-T---CTAT--A---T---A-TACGAG-ATCAATA--------A--C----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CAA--TCAAAT-AACT-TTCA-CAGAGG--TTTATTTTATAT-CG-ATGACCA----AAGAAGGA---AAA----AGT-GT--TTGG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTT----A-AT-T-CCCATTACGGA-A-TGTTTG-ACG-TTAGCGG---------A------GATT-ATTTTTAATAGACTCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTAACAAT--CATAACGTA-TGTTTA--T-AAA-----CGTTG-T---ATCTG---AACTACA--G-G-GTGCT-------G---CT-------------------------------TGCGTT-TGG------------------------AA-AT-----------------TA-------------TAT--G------------AAGA--------T-TT---AAACACT--TTTGT---TTGAAA-TGC-TACC--ACAAATTTTCTGAT-G-AGAT--GT-ATCA--TTAAATT----T-GTCAAGAAT--T-TG-C-C--AACTCACAA-TGA--G-TAA-GA---AACC-A-C--AGAATGAAAACCAAGAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACACCGTG-AC--G--GA-A---T-CA-TGA------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTT-A----A---C-A----TAAC--AATT-CATTAAT-TCC------TTG---TTGGGA-C-TGGTTT-TCACTCGTAAGT-----ATATC-A--A--CAAA-----A-C------T--ATA-----ATA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAA-TT--G----ACAA--C------GCTAGAATTG-AA-CACAGAA---CAGACATTCCTA-AATACAAACAAC---------CTGGCGATAAAAAAAAAAAAATTGGGA-TTTTTATATA-TT----TTTTC-A--TTTCG--AAGAGTTATT--TTAC-GAAA-TACT--AACTAAGATT--GCCTGGAAATTGA---AC-T-GTTTTTATGTTT---AGCGTTAAAT--------ACACTC-TAATTA--ACGTAG-TTGA-TACAGATTT--CT---TTACATAACAACG--CTTTCAG---GA-ATTC----ATCGCATTCTC--TA--TTCTTTT--ACT-GCGA-CATGAA-ATG-TCTAATATACAGT-AACC-ATATACAAGGGGGAATG
gi|30 : T--TCT-AGATAAAGT-AACC-ATATACA--GGAGAACGa
gi|4 : CAGCCATTC-----CCG----C-AAA--GG-GTAAA-T-TAATTTTC-GAAAAAAAAGCAAATA-TTT--GAA-GTA---TGGAG-GGG-ATAAACTGAAAAGT--AA-TTAATG---AAAGAA-G----G-A--ATG-TTGGTGTGTACAT-AATT---GAAAGTTTTGTCCACA-C------A--TAG-CATAGATTGAT--ACAATCATACACTGACGGCAAACAAACCTCCTATT--A-ATTACCCTGTTCACG---------GAACTA--------------TAAGTACAATG-CTGCTA-----------AG-----GACGAC-TG--G-TTC--TTT-GTTTT-TGGAAGACAT-GTATTAACAAGG-TTGAAAAA-CAATT-GACAGT---------------CAAAAAGG-TTAC--A-----TAC--AACGA-------TAA-----A-GTATGCA-CT-AG----CGAAATGT-CAA-AGTATTATCTC-C--TTTT-GTGA--AATT-TGTACAATTATTTCTACT-TACT-CTTTTTCTCAAATGATT--AAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGGCTTG--AA-GTAA-CAAG----GAGA--TAAA--TG----------------ACT----------------------G-GGTTTTCAGATAA-TGGACGCT-T-A-----GGTA-----AG-CCAC--TCTG-T-TCG-TTA-GGA-AAATAGT-TA-GTTCT-AGT-ACT-GCAACA---TTA-CATTTAAACC----ATT-TTATT-TCTTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATT---TTGGAATA-ACAG-AAATAA--A--AACAATAAAA--GAGAA-CAAT-T------TAAGA---AAAGTAATTT-TA-TCAATAGAAAAAGAG-AAAAT--G-TG--AAAATT--TATAAAACTGA-T-AA--CAATTCAA---CAC----ATAATAACA-TTAATAATTT--AACTTC-ATGTA-G-C-AT-ATTT---GCA-TGTATT----ACT--TGTCCATTA--GTCTTAGCT------------AAATATG-----T-ACTT--G--T------------CA-CT--ACACAC-C---AAAGAT--A--TATAAGGA--TC--AGAG--CATATAAAGGTTTG--ATCG-TT--CGG--TAA-ACAGGATG----TACATGAACGGAAACACAGAAT-CACTTTG-T-AATCCCA-AGT---A-TATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAA-----ATCAA-ATGA-C-ACGAAACA---TT---A---AGAAAAATAGGTG--TTTTCAGTGAAAATA-CAGAATAA-GGTTGGAAACG-AATATG-C--TC-C--GT---AAC-AGTAAAAAAAAAGTTCCAATGCTATTCT-GGCAATTA-ATTGCA--TTGTAGTGCATT-ACT------CTGACACAG----CTCGTGAAT-G------TA-TTATA-GA--TTCAT--AA-ATATAAA--TGT-CATA-TA--TTG--TT-AAT-TTGGCT--TTATT---TT-TTTTT---AA------------T-ATATT-TC-CGTAA-CGGGAT------TA-T--G-T-C---AT--ATGAC-AAAC---GTTTC-G-T-G-A-CACTTG---------CTAA--A-ATC-------G--G-ACCTTTG--TGTCTTAAA-AAG---ATTGT---TAT--AA-ATTT--T-AT-TCAT-AAAGT--AG-TTA-C--AATTG---CAATT-AAAA-TTA---TT------------C--TTT--AC--ATT---ATTTT-AAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-AT-AATA--------AACT----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAACAT-AAAC-TTC-ACAGAGGGTTT-ATTTTATAT--G-AT-A-------ACGAAGGA---AAA-T--AGT-GTTCT-TG-CAG-----AAA-CTATT--C-TG-C-TG-A----TTTTT---A-GG-T-CCTATCGGACTTTT-C-A-AT-T-CC-ATTACGGA-A-TGTT-G-ACG-TAAGCGG---------A------GATT-ATTTTTAATAGACTCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAACCATC-T----A---TCGA-ATG-CAGTAACAATCCCGTAACGgctga
gi|5 : AG-AATATG-C-TTT-CCTGT---AAC-AGTAAATCAAAATTTCCAATGCTATTCTCGGCCATTT-AATTGA-TTTGTAAGGCATT-ACT------CTAACACAG-A--CTCATAAAT-AC-----TATTTTCA-GACCTTCAT--AA-A-ATAAA--AGT-CATA-TA--TTGCTTTCAAA-TTTGC--AGTATT---TC-CTTTTTAAAATAAAA------CTTATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGAC-AAAC---GTTTC-GTT-CAA-CA-TCG--------CTTAATCA-AC--------C--G-A-CTTTGGCTGTC-TAAACAAGCATACTG--A-AGTC-AACATTT--T-AT-TCATCCAAGA--AG-TCA-C---ATTGGCAAAATT-TAAACATA---TTCGTCTTATACTACTTTTTTGACA-ATC---ATTTACAAATAT----ACGA-TG--C-ATTAA---CCTGA-TACAAGTATCAATAAAT-----A--CAATAT-AAC---CTTGCATTTTCGTTCAATGGA-----------TA------TGC---------------GCCCA--TAAAATAAAAC-TTCAA-AGAGG--C-----TT-TATCCG-ATGAT------ATGAAGGC---AAA-T--AGT-G---T-GG--AG-----AAACCTATT--CTTG-CTTG-ATTTTTTTTT---A-GG-TGCCTATCAGACTTTT-C-A-AT-T-CC-GTTACGGATC-TATT-ACACGCTTAACGGATATAT---A------GATT-A--TTTAATAGA-TCAAC-ACCTTTCACAA--AAAATC--TACGA-GGCATACCGCTGAA-CATCAT----G---TTGAGATG--AGTACCA----TATAACGTAATGGTTT-ATAAAAAA---CGCTGATAAAATCTGGTGAGG-ACA--G-GCGTACC-------AACTCTAATATTT-----CTCT-----AT-AAA----TGCGCTATGAGTAAACAATAGTTCTTTATATATCAA-AT----------------ACA-------------TAT--G------------AAGA--------TACT---AAACATT--TTTGT---T-GAAA-TGC-AACC--ACAA---TTCTGATAG-AGATTAGT-A-CAA-TTAAATTTTTGTTGTCAGTTATAGT-TGTC-C--AA-TCA-AC-TGACTGTTAATGATATGCCCTATC--AGAATTAAAACAAATAAT---TATTTACATA--AGTTGTG--A-C-TA---TACGTTTA-A--AGTT----AGAAACCACACA-CGTTGAC--GTTGACA---TACA-T-ATGAGGGAC-ATGTGGTT--T---TTAGCGACAGTAG-----GAC--C-ATTTT-ATCT-A---C-C----TAATCTAATTCCAT---T-TCTA-----TTG---GTTGGAGC-AGATTTATCA-TCGTAAGT---A-ATATT-ATTAT-CAAATAAGGA-CA-----T--ATA-----CTA-GTGTAT----GAAAAA--------CGGACTGACCG---TTGTCGTAT-T--AT---------AATGTTATA----AGAA--C------GCTAG-ATTGAAA-CACAGAACATCAAACGATCCTAGAAT--AAACAACA--------CTGGCGAC------------ATT-GGATTTTTTATATA-TTTTTCTCTACTACTTTTTGGAAAGAGTTATTGATTAATGAAA-T-AC--AAT--AGATTCATCATGATAATTGTTCTACAT-G-GTTGA-GTTTGTAG-CGTT--GTTGACTTTGACA-TC--ATTTATTACGTAG-TTGA-TACA-ATTA--CTTAGTTACGTTCAAATGAACATTCGGTCAGATGTTCAG--A--GCA-TCTCATTAATTTTCTTTTGACTAGCAA-TATG-AGATCGTTT-ATATAAAGT-AACTGATAT
gi|6 : AAAAT-----CT-ATTTT-TC--GTAAC-GGGAT------TATT--GTTCC---AT--Atagcagatagaatggtgt
gi|6 : tgatgtaattagtagtccC-AA-ATTT--T-AC-TCAT-CAAGTGAAG-TCA-CG-AATTGAG-CAATT-TAGA-ATA---TTTTCTTAGG----CCTTTT--ACA-TTTTTGATTTTGAACTATGTTCAC-A-TTTAC-AT--AAAAT---AACACAAG-ATCAATATAGATACGA--C----T-TAC---CT---GC-------------AGTCTGTCCAATTCAGATTATGC---------------G-ACAGTTACAAT-AAACCTTCAACAGAGG--CT-ATTTT-TAT-CG-ATAATGGTCATATGAAGGATATAAA-TTTGGTTGT--G-GGTCAGTTTATGGA-TTATTTCC-TC-C-TG-A--AATCTT------AG-TGCCTATCAGACTTTTTC-A-AT-TTCC-GTTACG---A-TAT--A-ACG-TTA-CGG---------ATATATAGATT-ATTTT-AATAGA-TCAAC-A-CTTTTACAACAAAATCT--TACGA-GGCAT-CCGGTGAA-CATC-TATG-A---TTGA-ATG--AGTAC--AT---ATAACGT-ATGTTTT-AT-AAAAA---CG-TG-T---ATCTGGTGAG--ACA----G-GTACC-------GC--CTAATC-TT-----CTCT-----ATAAAA----TGCGTTATGG------------------------AACATAGTTCCTTTAAACAAGACA-------------TAT--G------------AAGA--------T-TT---AAACA-T--TTTGT---T--AAA-TGC-AACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA--TAAA-T----TTGTCAAGAAT--T-TT-T-CCAAA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-CCAGGAATAAAAAC--AAAAT---TATTTACAT---AGTGGTTGCA-CTTATT-TA-GTGTG-A--A--TCTACGAGA-----GAA-CGTT-ACCTG--GA-ATTCT-TA-T-C------AC-ATG----TGGTGTGTGAGCG--AG-AGCGCGCG----C-ATTTT-A--C-AAGCC-AACTTCAA---AATTCCA--AAT-TCTCTTTGATTG---TGGGTAGCATGTCTT-TCA-TCGT-AGTTTAA-ATATC-AT-ATTCTTA-----C-CA-----T--GTAGATTTGTA-TTATGAGTTAAAAAAA--------CA-------CGAT-TT------CTT--ATACTTATATCAAAGTTA-G----AC-A--C------GCTAGGATTTAAA-CACAGAA---CATATATgttagtactcgagaatattcgtgtgtcaagcttagcgaacctaatacgcttttgtttaactaggtcagagaactctctatgtgagtgatctatataaatatgtaatgagcaaattttactcatcaagtgaagtcacgaattgagcaatttagaatattttcttaggccttttacatttttgattttgaactatgttcacatttacataaaataacacaagatcaatatagatacgacttacctgcagtctgtccaattcagattatgcgacagttacaataaaccttcaacagaggctatttttatcgataatggtcatatgaaggatataaatttggttgtgggtcagtttatggattatttcctcctgaaatcttagtgcctatcagactttttcaatttccgttacgatataacgttacggatatatagattattttaatagatcaacacttttacaacaaaatcttacgaggcatccggtgaacatctatgattgaatgagtacatataacgtatgttttataaaaacgtgtatctggtgagacaggtaccgcctaatcttctctataaaatgcgttatggaacatagttcctttaaacaagacatatgaagatttaaacattttgttaaatgcaaccacaatttctgatagagatgtatcaataaatttgtcaagaatttttccaaatcaaatgacgtaagaacccaccaggaataaaaacaaaattatttacatagtggttgcacttatttagtgtgaatctacgagagaacgttacctggaattcttatcacatgtggtgtgtgagcgagagcgcgcgcattttacaagccaacttcaaaattccaaattctctttgattgtgggtagcatgtctttcatcgtagtttaaatatcatattcttaccatgtagatttgtattatgagttaaaaaaacacgatttcttatacttatatcaaagttagacacgctaggatttaaacacagaacatatata
gi|7 : tgatgtaattagtagtccaaaatctatttttcgtaacgggattattgttccatagttagtactcgagaatattcgtgtgtcaagcttagcgaacctaatacgcttttgtttaactaggtcagagaactctctatgtgagtgatctatataaatatgtaatgag--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATa
gi|7 : TC-TAGAG--CATATAAAGGTTTG--ATCG-TTA-CGG--TAA-ACAGGATG----TACA-TAACGGAAACACAGAATACACTTTG-T-AATCCCA-AGTA--AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCATTT-CTC-ATCA-TCGTC--TTTCAAGAT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG--TTTTCAGTG-AAA-A-CAGAA-AA-GGTTGG-AAAG-AATATG-C-TTC-C--GT---AAC-AGTAAATAAAAATTTCCAATGCTATTCT-GGCAATTA-A-TTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTGAAT-G------TA-TTTTA-GA--Tannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctagagcatataaaggtttgatcgttacggtaaacaggatgtacataacggaaacacagaatacactttgtaatcccaagtaaatattgctcaagagtagagtttatctacaaaatgcttctcagtccatttctcatcatcgtctttcaagatatcaaatgacacgaaacatttaagaaaaataggtgttttcagtgaaaacagaaaaggttggaaagaatatgcttccgtaacagtaaataaaaatttccaatgctattctggcaattaattgatttgtatgcattactctgacacagactcgtgaatgtattttagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggactttgtgtctaaaaagatgtaatatcaaattttattcataaagtagtcacaattggcaatttaaaatattctttttacattattttaatatcacatcatatatacgagatcaataactaacctatatctgcgccataaataaacttcaacagaggttattttatcgatgaaagaaggaaaatagtgttggcagaaactattctgctgattttttaggtgcctatcggacttttcaattccattacggaatgttgacgttacggga
gi|7 : aaaatttaaaactgactaacaattcaaccatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--------G--G-A-CTTTG--TGTC-TAAA-AAG---A-TGT-AATATC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGC--AATT-TAAA-ATA---TT------------CTTTTT--ACA--TT---ATTTTAA--TAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAA-T-AAAC-TTCAACAGAGG--TT-ATTTT--AT-CG-ATGA-------AAGAAGGA---AAA-T--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A---TTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-ATTACGGA-A-TGTT-G-ACG-TT-ACGG---------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggactttgtgtctaaaaagatgtaatatcaaattttattcataaagtagtcacaattggcaatttaaaatattctttttacattattttaatatcacatcatatatacgagatcaataactaacctatatctgcgccataaataaacttcaacagaggttattttatcgatgaaagaaggaaaatagtgttggcagaaactattctgctgattttttaggtgcctatcggacttttcaattccattacggaatgttgacgttacggga
gi|8 : aaaatttaaaactgactaacaattcaaccatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctagagcatataaaggtttgatcgttacggtaaacaggatgtacataacggaaacacagaatacactttgtaatcccaagtaaatattgctcaagagtagagtttatctacaaaatgcttctcagtccatttctcatcatcgtctttcaagatatcaaatgacacgaaacatttaagaaaaataggtgttttcagtgaaaacagaaaaggttggaaagaatatgcttccgtaacagtaaataaaaatttccaatgctattctggcaattaattgatttgtatgcattactctgacacagactcgtgaatgtattttagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATAACGTAATGTTTA--T-AAAAA---CGT-G-T---ATCTG---AGATACA--G-G-GTGCT-------G---CT-------------------------------TGCGTTATGG------------------------AA-AT----------------A---------------TAT--G------------AAGA--------T-TT---AAACACT--TTTGT---T-GAAA-TGC-TACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCAAGAAT--T-TG-C----AA-TCA-AA-TGAC-G-TAA-GA---AACC-A-C--AGAATAAAA--CAAAA-T---TATTTACAT---AGTTTTG-CA-C-TA---TA-GTGTG-A--AA-T----AAAA-----ACA-CGTG-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA--G-AG-----G----CCATTTT-A--C-A---CCA----TAA---A-TT-CAT-AAT-TCC------TTG---TTGGGAGC-TGGTTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----ATA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----AC-A--C------GCTAG-ATTGAAA-CACAGAA---CAGACATTCCTA-AAT--AAACAACA--------CTGGCGAC------------ATT-GGA-TTTTTATATATTT----TCTTC-AC-TTTC-GAAAGAGTTA-T--TTAA-GAAA-TAAC--AATAAAGA-T--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTTAAAT--------ACA-TC-TAATT---ACGTAG-TTGA-TACA-ATTA--CT---TTACATACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATAC-AGGGGGAATGga
gi|9 : CAGCCATTCT---CCCG----CAAAA--GG-GTAAA-T-gc
gi|9 : ACTGACGG-----AA-CCT---ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-GC---ATG-CT-CTA-----------AG-----GACGACGTG--G-TTC--TTTAGTTTT-TGGTAGACAT-GTATTA-CAAGGG-TGAAAAA-CA-TT-GACAGTTTTAGATACGTTGT-CAAAAA-G-TTAA--A-----TAT--ATCCA-------TAG-----Annnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaactgacggaacctattaattaccctgttacggaacatagcatgctctaaggacgacgtggttctttagtttttggtagacatgtattacaagggtgaaaaacattgacagttttagatacgttgtcaaaaagttaaatatatccatagatgattaaatgttttacgataaagtatgc
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|25 ): GGACTTAAAATCTGTTATCTTTTATCTTTCGAGATGAATTCAATAAAGTCAATCATATGTAAAAGCAATG
Unaligned ( gi|31 ): GGATATATAGATTATTTTAATAGATCAACA
Alignments
lowQualScore : 11111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 1111 11 1 111 11 1 333 11 1111 11 1 111 1 222222222 1 1 111 1 111 44444444444 1 11 44444 333 11 333333333 6666666666666666666666 2 333333333333333333 111 11 666666666666666 11111111111111 2222222 3333333 1 1111 1 11 1 1111 1 11 1111111111 11 11111111111111111111111111111111111111111 22 1 22222 22222 11 111 11 111 1 1 1111 11 111 111 1111 11 111111 111 1 44444444 111 11 2222222222 111 11 111 111 3333 11 1 11 66666666666666666 222 666666666666666666 1 22 111 11111 111 22 2222222222 111 111 1 1 1 111 222222222222 22 1 1 111 1 1 111111 1111 22222222 1 22 11111 2222 111 111 2222222 1 1 1 11 111111 11111 333333333 22222222222 111 2222 1 11 11 44444444444444 111 111 1 11111 11111 111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111 11 3333333 111 1111 11111 1111 11111 1 11 7777777777777777 1 11 33333333 2 11 2222222 2222 111 22222222 1111111 1111 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 22222222 111 111 11 1111 1111111 1 111 2222 111 22 111 222222222222 11111 111111 11111111111 33333333333333333 333 111 22 111111 1 11111 1111111 22222222222222 222222 22222 2222222222222222 111 111111 222222222 1111 11111111111 1 22 22222222 4444444444444 1111 1111 1111 1111 2222 1111111 444444444444 2222 111 111 2222 1 11 111
lowQualScore : 4444 7777 8 11 8 8 8 5 1 111 33 0 222 00 4444 33 0 777 0 444444444 0 0 777 0 777 3 22222222222 0 3 22 11111 8 111 11 8 8 222222222 8 6666666666666666666666 8 0 999999999999999999 3 999 8 11 0 8 1 6 6 99 6 6 6 666666666666666 88888888888888 99 1 1111111 0000000 0 8 7777 11 0 8 0 8 8 11 1 0 6 8 0 8 8 9999 8 8 8 8 8 8 6 11 88 8 8 0 9999999999 33 00000000000000000000000000000000000000000 3 0 1 88 6 8 8 00000 00000 8 8 11 8 8 111 88 8 77 8 8 8 8 0 444 6 0 7777 8 11 88 8 0 444 8 88 444 8 9999 0 11 8 8 888888 0 8 111 0 44444444 444 1 8 8 0 88 44 8 99 99 99 2 6 99 0000000000 88 88 8 3 000 33 777 111 9999 33 0 33 55555555555555555 333 55 333333333333333333 0 33 8 444 33333 11 333 6 11 1 99 6 6 99 6 6 3 1111111111 99 6 6 6 888 0 8 0 444 0 3 6 5 5 99 2 000 6 6 6 5 333333333333 11 0 888 6 6 1 1 5 5 5 5 77 000 5 1 5 5 9 2 0 0 5 444444 2222 00000000 7 5 66 1 77 555 1 77 5 1 55 77 33333 1 7777 1 111 6 000 6 0 4444444 0 0 5 0 33 444444 5 66 5 888 66 5 00000 5 5 5 777 5 333333333 9999 66666666666 5 5 77 5 5 000 6 1111 77 5 66 5 5 88 66 0 5 11 66 5 55 888 88888888888888 66 333 000 0 1 99999 5 99999 5 77 555555555 5 0000000000000000000000000000000000000000000000000000000000000000000000000000000000 5 77 1 5 5 88888 1 11 5 5 4444444 0 000 7777 5 8888 5 77777 5 8888 5 5 5 6666 22222 5 5 5 5 5 5 5 1 999 666 5 11 0000000000000000 6 7 3 6 6 55 3 99 6 6 6 6 11111111 0 0 77 4444444 3333 111 00000000 9999999 4444 6 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 00000000 5 000 2 77 000 5 5 22 77 77 5 77 5 1 5 0000 66 4 7777777 4 4 4 4 2 4 111 4 4 55 2 6666 0 777 111 00 4 4 222 4 000000000000 00000 4 4 55 55 4 777 4 4 4 222222 4 44444444444 11111111111111111 4 4 7777 222 4 9999 1 222 7 8 88 4 777777 777 4 0 4 0 99999 5555555 22222222222222 77 111111 5 00000 2222222222222222 555 444444 5 66 666666666 5 0000 99999999999 7 5 888 0 5 44 4 00000000 7777777777777 5 5 6 4444 6 6 8888 9999 6 6 77 1 6666 0000 6 6 99 3 5555555 222222222222 5 5 6666 6 6 6 77 000 77 000 5 0000 77 5 5 77 6 77 1 5 6 6 33 5 6 6 444
lowQualScore : .... .... . .. . . . . . ... .. . ... .. .... .. . ... . ......... . . ... . ... . ........... . . .. ..... . ... .. . . ......... . ...................... . . .................. . ... . .. . . . . . .. . . . ............... .............. .. . ....... ....... . . .... .. . . . . . .. . . . . . . . .... . . . . . . . .. .. . . . .......... .. ......................................... . . . .. . . . ..... ..... . . .. . . ... .. . .. . . . . . ... . . .... . .. .. . . ... . .. ... . .... . .. . . ...... . . ... . ........ ... . . . . .. .. . .. .. .. . . .. .......... .. .. . . ... .. ... ... .... .. . .. ................. ... .. .................. . .. . ... ..... .. ... . .. . .. . . .. . . . .......... .. . . . ... . . . ... . . . . . .. . ... . . . . ............ .. . ... . . . . . . . . .. ... . . . . . . . . . ...... .... ........ . . .. . .. ... . .. . . .. .. ..... . .... . ... . ... . . ....... . . . . .. ...... . .. . ... .. . ..... . . . ... . ......... .... ........... . . .. . . ... . .... .. . .. . . .. .. . . .. .. . .. ... .............. .. ... ... . . ..... . ..... . .. ......... . .................................................................................. . .. . . . ..... . .. . . ....... . ... .... . .... . ..... . .... . . . .... ..... . . . . . . . . ... ... . .. ................ . . . . . .. . .. . . . . ........ . . .. ....... .... ... ........ ....... .... . ..................................................................................................................................... ........ . ... . .. ... . . .. .. .. . .. . . . .... .. . ....... . . . . . . ... . . .. . .... . ... ... .. . . ... . ............ ..... . . .. .. . ... . . . ...... . ........... ................. . . .... ... . .... . ... . . .. . ...... ... . . . . ..... ....... .............. .. ...... . ..... ................ ... ...... . .. ......... . .... ........... . . ... . . .. . ........ ............. . . . .... . . .... .... . . .. . .... .... . . .. . ....... ............ . . .... . . . .. ... .. ... . .... .. . . .. . .. . . . . .. . . . ...
lowQualScore : 8888 0000 0 00 0 0 0 5 0 000 88 0 888 22 8888 88 0 555 0 888888888 0 8 000 0 000 2 88888888888 0 2 55 22222 0 000 00 0 0 000000000 0 0000000000000000000000 0 0 000000000000000000 8 888 0 00 8 0 4 7 7 88 7 7 7 777777777777777 88888888888888 22 0 7777777 4444444 6 0 0000 88 6 0 8 0 0 00 4 0 0 0 8 0 0 8888 0 0 0 0 0 0 0 00 88 0 0 8 7777777777 88 88888888888888888888888888888888888888888 2 8 4 44 0 0 0 00000 88888 0 0 00 0 0 000 88 0 44 0 0 0 0 8 000 0 6 0000 0 00 88 0 8 000 0 88 000 0 8888 8 00 0 0 444444 8 0 888 6 44444444 000 4 0 0 8 88 00 0 22 22 22 5 7 22 8888888888 88 88 0 8 000 22 555 000 0000 88 0 88 88888888888888888 222 88 000000000000000000 0 88 0 888 00000 66 888 7 77 0 22 7 7 22 7 3 7 8888888888 88 7 7 7 333 8 0 8 000 8 3 7 5 5 22 5 888 7 7 7 0 666666666666 66 6 333 7 7 7 4 7 7 7 7 99 000 7 0 0 0 8 0 0 0 0 444444 4444 66666666 3 0 99 7 99 999 3 99 7 4 00 99 11111 0 7777 7 777 7 000 6 1 6666666 0 8 0 0 22 444444 0 99 0 888 11 1 11111 0 0 0 222 0 111111111 4444 88888888888 7 7 99 7 7 000 6 0000 55 0 99 0 0 11 99 0 0 99 99 0 44 888 11111111111111 99 000 000 6 7 33333 7 44444 7 99 666666666 7 6666666666666666666666666666666666666666666666666666666666666666666666666666666666 7 99 4 7 7 44444 4 66 7 7 3333333 6 000 3333 7 0000 7 55555 0 1111 0 0 0 9999 22222 0 0 0 0 0 0 0 4 666 000 7 00 2222222222222222 7 3 3 7 7 88 5 22 7 7 7 7 00000000 7 0 55 8888888 8888 777 55555555 2222222 2222 7 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 77777777 7 000 3 99 000 7 7 44 99 99 7 99 7 4 0 6666 11 4 7777777 0 0 0 0 0 0 000 0 0 55 6 5555 8 000 000 00 0 0 555 0 888888888888 00000 0 0 55 55 0 000 0 4 4 888888 4 33333333333 22222222222222222 4 4 9999 222 4 4444 9 222 7 9 22 4 222222 888 4 1 4 0 66666 8888888 44444444444444 99 000000 7 00000 4444444444444444 666 444444 0 99 999999999 0 6666 66666666666 4 0 888 7 7 77 9 77777777 9999999999999 7 7 7 2222 7 7 5555 8888 7 7 99 7 8888 8888 7 7 88 2 3333333 444444444444 7 7 3333 7 7 7 99 000 99 000 7 0000 99 7 7 99 0 99 7 7 7 7 66 7 7 7 666
consensus : CAGCCATTCT---CCCG----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAANGCAAA-A-TTT--GAA-GTAG--TGGAGTAGG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----G-AC-ATG-TTGNTGT--ACAT-AATTT--GAAAGTTTTCGCCACA-C------C--TAG-CATAGATTGAT-CACAATCATACACTGACGGCAAACAA-CCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-GC-CGATG-CTGCTA-----------AG-----GACGACATN--G-TTC--TTTAGTTTT-TGGAAGACAT-GTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TGT-CAAAAAGG-TTAC--A-----TAC--ANCGA-------TAA-----AAGTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATTGTGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGG--TG-TAA-GTAA-CAAG----GA-A--TAAA--TGGT-------------TACT----------------------GCGATTTTCAGAAAA-TG-ACGCT-T-A-----GGTA---TAAG-C-AC--TCTG-T-T-G-TTACGGA-AAATAGT-TA-GTTCT-AGT-A-T-GAAACA---TTA-AATTTAAACC----ATT-TT--T-TCTTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--AACA-TAAAA--GAGAAACAATAT------TAAAA---AAAGTAAATT-TA-TCAAAAGAAAAAGAG-AAAATA-G-TG--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATGATAACT-TTAATAATTTT-AACTTC-ATGTACA-T-AT-ATAT---GCA-T-TATTT-A-ACT--TGCCC-TTA--GTCTAAG-T------------AAATATG-A-TGTGACTT--G--TGTG---------CA-CT--ACACAC-CT--AAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATANAGGTTTG--ATCG-TTA-CGG--TAA-ACGGGATG----TACA-GAACGGAAACACAGAATACACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAGGCT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-TTTTTCAGTGAAAA-A-CAGAA-AA-GGTTGGAAAAG-AATATG-C-TTC-C--GT---AAC-AGTAAATNAAAATTTCCAATGCTATTCT-GGCAATTA-ATTTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-G------TATTTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TA--TTG--TTAAAA-TTGGCT-AGTATT---TT-TTTTT---AANAAAA------CT-ATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGACAAAAC---GTTTC-G-T-GAA-CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---ANTGT-A-TGTC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGC-CAATT-TAAA-ATA---TT------------CTTTTT--ACA-ATT---ATTTTAAAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-NAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAAAT-AAAC-TTCAACAGAGG--CT-ATTTT-TAT-CG-ATGA-------ATGAAGGA---AAA-T--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-GTTACGGA-A-TGTT-G-ACG-TTAACGG---------A------GATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTACCAAT--CATAACGTAATGTTTA-AT-AAAAA---CGTTG-T---ATCTGGTGAGGTACA--G-G-GTACC-------G---CTA----TT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AT----------------ACA-------------TAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-NACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCAAGAAT--T-TG-C-C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAATAAAAACCAAAAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTT-A--C-A---C-A----TAA---AATT-CATTAAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----NTA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----ACAA--C------GCTAGAATTGAAA-CACAGAA---CAGACATTCCTA-AATA-AAACAACA--------CTGGCGAC-----------AATT-GGA-TTTTTATATA-TT----TCTAC-AC-TTTCGGAAAGAGTTATT--TTAA-GAAA-TAAC--AATAAAGATT--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTT--AT--------ACA-TC-TAATTA--ACGTAG-TTGA-TACA-ATTA--CT---TTACGTACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTCCTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATACAAGGGGGAATG
Reference ( family-1054 ) : CAGCCATTCT---CCCG----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAANGCAAA-A-TTT--GAA-GTAG--TGGAGTAGG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----G-AC-ATG-TTGNTGT--ACAT-AATTT--GAAAGTTTTCGCCACA-C------C--TAG-CATAGATTGAT-CACAATCATACACTGACGGCAAACAA-CCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-GC-CGATG-CTGCTA-----------AG-----GACGACATN--G-TTC--TTTAGTTTT-TGGAAGACAT-GTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TGT-CAAAAAGG-TTAC--A-----TAC--ANCGA-------TAA-----AAGTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATTGTGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGG--TG-TAA-GTAA-CAAG----GA-A--TAAA--TGGT-------------TACT----------------------GCGATTTTCAGAAAA-TG-ACGCT-T-A-----GGTA---TAAG-C-AC--TCTG-T-T-G-TTACGGA-AAATAGT-TA-GTTCT-AGT-A-T-GAAACA---TTA-AATTTAAACC----ATT-TT--T-TCTTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--AACA-TAAAA--GAGAAACAATAT------TAAAA---AAAGTAAATT-TA-TCAAAAGAAAAAGAG-AAAATA-G-TG--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATGATAACT-TTAATAATTTT-AACTTC-ATGTACA-T-AT-ATAT---GCA-T-TATTT-A-ACT--TGCCC-TTA--GTCTAAG-T------------AAATATG-A-TGTGACTT--G--TGTG---------CA-CT--ACACAC-CT--AAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATANAGGTTTG--ATCG-TTA-CGG--TAA-ACGGGATG----TACA-GAACGGAAACACAGAATACACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAGGCT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-TTTTTCAGTGAAAA-A-CAGAA-AA-GGTTGGAAAAG-AATATG-C-TTC-C--GT---AAC-AGTAAATNAAAATTTCCAATGCTATTCT-GGCAATTA-ATTTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-G------TATTTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TA--TTG--TTAAAA-TTGGCT-AGTATT---TT-TTTTT---AANAAAA------CT-ATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGACAAAAC---GTTTC-G-T-GAA-CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---ANTGT-A-TGTC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGC-CAATT-TAAA-ATA---TT------------CTTTTT--ACA-ATT---ATTTTAAAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-NAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAAAT-AAAC-TTCAACAGAGG--CT-ATTTT-TAT-CG-ATGA-------ATGAAGGA---AAA-T--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-GTTACGGA-A-TGTT-G-ACG-TTAACGG---------A------GATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTACCAAT--CATAACGTAATGTTTA-AT-AAAAA---CGTTG-T---ATCTGGTGAGGTACA--G-G-GTACC-------G---CTA----TT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AT----------------ACA-------------TAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-NACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCAAGAAT--T-TG-C-C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAATAAAAACCAAAAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTT-A--C-A---C-A----TAA---AATT-CATTAAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----NTA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----ACAA--C------GCTAGAATTGAAA-CACAGAA---CAGACATTCCTA-AATA-AAACAACA--------CTGGCGAC-----------AATT-GGA-TTTTTATATA-TT----TCTAC-AC-TTTCGGAAAGAGTTATT--TTAA-GAAA-TAAC--AATAAAGATT--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTT--AT--------ACA-TC-TAATTA--ACGTAG-TTGA-TACA-ATTA--CT---TTACGTACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTCCTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATACAAGGGGGAATG
gi|1 : AGCCATTCTTCTCCCGAAAAC-AAAAAGG-GTAAAATGTAATTTTCAGAAAAACCCGCAAA-A-TTTCGAAA-GTGGATTGGAGTAGG-A--AACTGAAAAGTTAAA-TAAATGGAAAAAGAAAG----G-AC-ATGATTGATGT--ACATTAATTTTTGAAAGTTTTCGCCACA-TATACCAC--TAG-TATAGATTGAT-CACAATCATATACTGACGG-----AA-CCT---ATT--A-ATTACCCTGTT-ACGCCAGCGGGGGAAC-A--------------TA-GC---ATG-CT-CTA-----------AG-----GACGACATTTGG-TTCCTTTTAGTTTT-TGGTAGACAT-GTA--A-CAAGG--TGAAAAAACA-TTCGACAGTTTTAGATACGCTGT-CAAAAAGGCTTAC--AGTATATGC--ATAGAATGTTTTTAACGGATAGGTATGCAACT-A-----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-TTGATGAAATGTGTA-AATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAATCAGT-TCGTAGAATATGCAGAGC-AAAAACATGTTTGATTGTCCATTT-GTGCATGG--TGTTAA-GTAA-CAAGTCGAAA-A--TAAACCTGGT-------------TACTTTCTGGTTTAAAAAGATGAGTAGCGACTTTCAGAAAAGTGAACGCT-T-AAACTTGATAGGTTAAGTC-ACTTTCTG-T-T-GTTTACGG--AAATAGG-TATGTACTCAGT-A-T-GAAACGACCTTA-AATCTAAACCATAAATT-TT--T-TCTTGTTTTCGTCCT-TGT-TTGATATATCGGGCAA-AATTTTTCATTG--TTGGAATA-ACAGAAAATAGAAAAGAACA-TAAAAAGAAGAAACAATATTTCCAATAACA---AAGGTTAATT-TAGTCAAAAGAAATAGAGAAAAATA-G-TGTCGAAATTTCTA--AAACTG--T-AA--CAATTTAAAATC-C----ATGATAACT-TTAATAATTTTAAACTTCAATGTGCA-TAATAATATTCGGCATT-TATTTAA-ACTGGTGCCC-CCG--GTCTAAA-TAAGTCTTCAGTAAAATATG-ATTGTGACTT--GTTTTTG---------CATCTTAACACACTCT--AAAGATTGA--TATA--GATCTC-TAAAGAGCATATACAG--TTG--ATTG-TTA-CGGAATAACATGGAATGATTTTACG-GA----AAACATAGAATACACTTTGAT-AAATCCA-ATA---AATA-TG-CTCAAGAGTAATAAAGTTTA--TATCAAATGCTTCTCAATTCATTT-CTCT-TCA-TCGTCCTTTTCAGGCTTAGTCAA-ATGA-C-ATGAAGAATTGTT---AGAGAAAAAAATAGGTGTTTTTTCAGTGAAAA-CTCAGAA-AAGGGTTGGAAGAGAAATATG-CATTCGC--GTGAAAAC--GTAAATCAAAATTTCCAATTATATTCT-GGCAATTG-AATTGATTTTCCA-TGCATT-ACT------CTAACACAGTA--CGCGTAAATAA------TATTTTAA-GA--TTCATACAA-A-AGAAAATTGT-CATAGTAT-TTG--TTAAAATTTGACTGAGTATTTCCTT-TTTCT---AAAAAAA------CTGATCAT-TCACGTAA-CGTGAT------TA-TAAG-TCC---AT--ATAACAAAACTTTGTTCT-G-TAGAATCA-TCGCTATATATCCTTA--A-ATATTTTCTCG--G-A-CTTTG--TGTC-TACA-AAG---ATTGCAA-TGTC-AA-ATTT--TAAT-TCAT--AAGT--AGTTCA-CAGAATTGG--CGATTATAAA-ATAGCTTT------------GGTTTT--AGC-ATT---ATTTGAATATA----AAC-AGT---C-AT--A---T---ACTACGAG-ATCAATA--------T--C----TGTACATGTT---ATCTTGTCA------A-----------TCAGATTATGC---------------G-CCA--TAAAAC-AAAC-TTCAACATGGG--CT-ATTGT-TAT-CG-ATGA-------ATGAAGGA---AAA-TA-AGT-GT--T-GG-CAGA----AAA-CTAAT----TG-C-TGCG--TTTTTGTAAAA-GGTTGCCTATCGGACTTTT-C-AGATGT-CCAGTTACTGA-ATTATT-G-ACG-TTTACGGCTGATATATA------GATTAATTTTTAATATA-TC-AC-A-CTTTCACAAT-TAGTTTTGTACGAGGGCAT-CCGGTGAG-CATG-T----AGTGTTGAGATGACGGT-C--AT--CATAACGTAATGTTTAGAT-AAAAAAATCGGTG-----ATCTGGTGAAGTACA--GTG-GTACCTCGGGTGG---CTA----TTTGTTGCTCCTGGGAAC-AAATGGCTGCTTTTTGG------------------------AA-A-----------------ACA-------------TAC--GTTCCTTTAATACAAGACATGGAAGT-TTTAAAAACATTGATTTGT---T-GAAACTGCTAACCGTACAA--TTTCTAATAGAAGAT--GTAATCAA-TTAAATT----TTGTCAAAAAT--T-TG-CAA--AA-TCA-AATTGAT-GTTAA-GAG--ACCC-A-C--AGAATAGATAACAAAAAT---TATTTACATCCCAGCATTTGCAGC-TAAACTA-GTGTG-AAGA--T----AAAA-----ACA-CGTT-AA--G--GA-A---T-CAGC-A------ACAATG----T--TAA-TAAGCGT-CC-AG-----GTTTCC-ATTTT-A--C-AGCCC-A----TAA---ATTT-CA-TAATCTCC------TTGATTTTGGGAGT-TGATTT-TCATTCGTAAGT---ACATATCAA--A--CAAAC----ACCA-----TCCATA-----CTAGTTATC-----GAAAAGAAGAGAATCAG-----GCGCGTTT------C-TAAAT---------AAAGATA-GAGTAAGAA--CAGGGCGGCTAGATCTGAAA--AT---A---CAGAGAT-------GGA-GACCAACACTTGGGGCCTGGCGAC-----------ATCT-GGA--TGTTATATA-TT----TCTAC-AC-TGTTGGAAAGAGTTATT--TAAA-GAAAGTAAC--AATAAAGAT
gi|10 : A-TTAAATT----TTGTCAAGAAT--T-TG-C----AA-TCA-TT-TGAC-G-TAA-GA---ACCC-A-C--AGAATAAAA--CAAAA-T---TATTTACAT---AGTTTTG-CA-C-TA---TA-GTGTG-A--AA-T----AAAC-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATA----A--T---TATGCGA-CA-GG-----C----C-ATTTT-A--C-AT--C-A----TAA---A-TT-CAT-AAT-TCC------TTG---TTGGGAGC-TGAATT--CA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----CTG-TTATG-----GAAAAA--------CAT-----CCG---TT------C-T--AT---------AAAGTTA-G----AC-A--C------GCTA-AATTGAAA-CACAGAA---CAGACATTCCTA-AAT--AAACAACA--------CTGACGAC------------ATT-GGA-g
gi|11 : -------------TAAT----------------------ACGATTT-CAGAAA--TG-ACGCT-TTA-----GGT----TAAG-C-AC--TCTGGT-T-G-TTACGGA-AAATAGT-TT-GTT-T-AGT-A-T-GAAACA---TTA-AATTTAA-CC----GTT-TT--T-TCTTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--AA---TAAAA--GAGAAACAATAA------AAAAAAAAAAAGTAAATT-TA-TC-AAAGAAAAAGAG-AAAAAATG-TG--AAAATT--TA--AAACTGACT-AA--CAATTCGA---C-C----ATGCTAACT-TTAATAATTTT-AACTTC-ATGTACA-T-
gi|12 : atggcactggttttcagaA-------------CAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-AACC--ACAG--TTTCTGATAG-AGAT--GT-AGCAA-TTAAATT----TTGTCAAGAAT--T-T--C-C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-T--AGAAT-AAAAC--AAAAT---TATTCACAT---AGTTTT-GCA-C-TA---TA-GTGTGAA--A--T----AAAA-----GCA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATA----T--T---TAAGCGA-CA-TG-----T----C-ATTTT-A--C-AC--C-A----T-G---AATT-CA-TAAT-TCC------TTG---TTGGGAGC-AGATTT-
gi|13 : gttagacaatatgcctttaagcaagCCTG-AATA-AA-CAAAA--------CTGGCGAT-----------A-CT-AGA-TTTTTGTAGA-TT----TATAC-AC-TTT-GG----------------A-CAAA-TAACATAATAAAA--T--GTCTCGAACTT------T-TAG-TTTTATGTTC---A-TTTC--AC--------ACA----TAATC---GTGTAG-ATGA-TACA-ATGATTTT---TTATGCAAAAAAA--CTTTCA----GA-ACTT----A--AAA-TCTG-TTA---TCCTTT--ACTTTCGA-CATG-A-AT--TCA-ATA-AAAGTCAACC-ATATGTAAAGG
gi|14 : AT-GTATTA-CAAGGGT-GAAAAA-CA-TT-GACAGT---------------CAAAAAG--TTAC--A-----TAC--AACGA-------TAA-----A-GTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATT-TGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGG--TG-TAA-GTAA-CAAG----Gcaatg
gi|15 : -C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAATAGGAT---AAAAT---TATTTACAT---AGTTTTG-CA-C-CG---TA-GTGTG-A--A--A----TAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AA-GG-----C----C-ATTTT-A--CAA---C-A----T-A---AATT-CA-TGAT-TCC------TTG---TTGGGAGG-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAA
gi|16 : AG-A--ATCGTAAAT-A------CGTTTTGA--A--TTCTT--AA-A-AGAAA--TGC-CGTA-TAA-TTG--TT-----TTG------TACT---TCCTTTTT---AAGAAAAAAACCCCT-ATGTTCTC-GGTAATC------------A-T--C-TCCCGGAC--ATAACAAAG----GTTTC-G-T-GAA-CA-TTG---------CTAA--A-
gi|17 : --------ACA-TC-TAATTA---CGTAG-TTGA-TACA-ATTA--CT---TTACATACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATACA--GGAGAATG
gi|18 : gAA-A-CAGAA-AA-GCTTGGAAA-G-AATATG-C-TTC-G--GT---AAC-AGTAAATCAAAATTTCCAATGCTATTTG-GACAATTA-A-TTGA-TTTGTA-AGCATT-ACT------CTATCACAG-A--CTCATAAAT-A------TATTTTg
gi|19 : T--ATGA-GAAAC---GTTAA-G-T-GAA-CA-TCA--------C-TAA--T-AT--------ACCG-A-CTTTG--TGTA-TAAA-TA----AATGTAA-TGTC-AA-TTTT--C-AC-TCAT-AATGT--AG-TCG-C--AATTGG--CAATT-TAAG-ATA---TT------------CTTTTT--ACA-ag
gi|2 : CAGCCATTCT---CCCG----C-AAA--AGAGTAAA-T-TAATTTTCAGAAAAAAAAGCAAA-AGTTT--GAA-GTAA--TGGAGTAGGGA--AACTGAAAAGT--AAATAAATG---AAAAAA-GACAGG-ACCATC-TTGTTA---ACAT-CATTT--GAAAGTTTTCGCCACA-C------CACTAGGTA-AGATTAATGCACAATCATACA-TGACGG-----AA-CCT---ATTCAACATTACCCTGTT-ACG---------GAAC-AATACTTGTACATTGTA-G---GATGGCT-TTA-----------AG-----GTCGACATC--GGCTC--TTTAGTTTTATGGAAGACAT-GTATTA-CAAGGGTTTGAAAA-CA-TT-GACAGTTTTAAATACG-TTTTCAAAAAGA-C-ACTGA-----TACCCATAGA-------TAATT---AAATGTACA--T-AGTATACGATAAGT--AA-AATGTTATTTC-CGTTTTTTGTGA--AAATGTGTACAATTTTTATCACTGTACTTCTTTTTCTCATATTATTGAAAT-AGT-TC----AATAT-CAGAGTTAAAAACAT-TTTGA-TGT-CATTT-TTGGATGT--TT-TAAAGTAAACAAG----GA-AAATAAA--TGGTAAGGGTTTTCAGATAAT----------------------ACGATTATCAGAAA--TG-GCGCTAT-A-----GGTT---TAAG-C-AC--TCTG-TCT-C-GTACGGA-AAATAATATT-CTTCT-AGT-A-TCGAAACA---TTAGAATTTAGACC----ATTATT--TGTATTG-TT-CG---T-TGTCTGAA---ATC-TGCAACA--TCTTAATTGGCTTG-AATA-ACAG-AAATAGCGA--A-CA-TAAA---GAGAA-CAAT--------TAGAA---AAAGTAAATT-TA-TCAAAAGAAAAAGAG--AAATT-G-TG--AAAATT--TA--AAACTGACT-AAACCAATTCAA---C-CATAGATGATAACCATTAATAATTTT-AACTTC-AAATACATT-AT-ATAT---GCA-T-TAATT---ACA--TGCCC-TTAATGTCT-TG-T------------AAATATG-A-TG-GACTTGGG--TGTGGTGTTGTGCCA-CTA-ACAAAC-CT--AAAGAT--A--TAT-AGAA-CTCATAGA--GCATATACAGGTTTGAAATCG-TTA-CGG--AAA-AC-AGATG----T-----TACGGAAACAT----TA-GCTTTG-TGAATCCCACAGTAAAAATATTGCCTCAAG-G---TAGAGTTTGTCTACAAAATGCTTCTCAATCCA-TT-CTCT-TCA-TCGTC---TTCAGGCT--ATCAA-ATGAGCGATGAAA-AC--TGGGAG---AGAAAAATA--TG-TTTTTCA-TG-AAA-A-CAGAA-AA-GGTTGG--AAG-AATATGCC-TTC-C--GT---AAC-AGTAAATAAAAATTTTC-ATGGCA-TCT-GGCAATTA-ATTCGAGTTTGTA-TGCATTAACTCTAGAGCTGAT-CAG-ACTCTCGTACAT-GTAAAATTATTTTTA-GA--CTC-T--AAGA-AGAAA--TGT-CATA-TAGTTTG--TTAAAT-TTGGT---GTA------T-TTCCT---AAAAAAT------CT-AT-TT-TC-CGTAA-CGGGAT------TA-T--G-CCC---TA--ATGACAAACA---GTTTCTG-T-G-A-CA-TCG---------CTAA--ATAC--------G--GAA-CTTTG--TGTC-TAAA-AAA---GACGTCA-TGTCAAA-ATTTGAT-ATCTCAT-AAAGT--AGATCACC--AATT-GC-CAATT-TAAA-ATA---TA------------A--TTT--AC--ATT---ATTTT-TAATA-----AC-A-----C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-TGC---CT---GT-------------AT----------TC------TGTCAATCAGATTATGCGG-CCA--T-AAAT-AAAC--TCAACAGAGG--CT-A--TT-CAT-CGAATGA-------ATAAAGGA---AAATT--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TGTT-TG-A--GAGGTGT---ACGG-TGCCTATCGGACTTTT-CAA-AT-T-CC-ATTACGAA-T-TATT-G-ACG-TT-ACGGTATATAGT-A------GGTT-A-TTTTAATAGA-TCAACAA-CTTTCA-AA--TAA-TT--TACGA-GACAT-CCGGTGAA-CATT-TAATGA---TTGACATG-GAGTACCA----TATAACGTAATGTTTA----AAAAA---CG-TG-T---ATCT------GTACAGCG-G-GTACT-------G---CTA----AT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AC----------------ATAGTCTAAACAAGAGTATTGG------------AAGA--------T-TT---AAACATT--TTTGTTGAT-GAAA-TGCTTACC--ACAA--TTTCTGATAG-CGAT--GT-ATCAATTTAAATT----GTGTCAAGAAT--TATG---C--AA-TCA-AA-TGAC-GTTAA-GA---ACCC-C-A--AGAATTAAAAC--AAAATTAATATATACAT---AGTTTT-GCA-C-TA---TA-GCGTG--------------AA-----ATA--------------A-A---T-CA-T-A------AC-ATG----T--T---TAAGCG--AC-AG-----G----C-ATTTTCG--C-ATCCC-A----TAA---ATTT-CA-TGAT-TCC------TTG---TT-GGAGC-TATTTT-CCA-TCGTAAGTTAAA-ATATCAA--A--CAAA-----A-CATGGTTT--ATAC----ATA-TTATG-----AAAAAA--------AAG-----CCG---TT------C-T--ATAA-------AAAGTTA-G----ACGACCC------GCTAG-ATTGAAACCACAGAA---CAGACATT-CTA-AAT------AACA--------CTGGCAGC------------ATT-GGA-TGTTTG-ATG-TT----TCTAC-AC-TTT--GGAAGAGTTA-A--TTAA-GAAA-TAAC--AATAAAGA-T--GCCTGGAAATTG----GC-T-G--TTTATG-TT---A-C-TT---T--------ACA-TCTTAATT---ACGTAGATTGAGTACC-AATA--CT---TTACATACAAACG--TTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTTCTTT--ACTAGCGACCATG-A-AT--TCT-ATAT
gi|20 : AAAATTTCCAATGCTATTCT-GGCAATTG-GTT-GA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-A------TA-TTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TAT-TTG--TTAcatattacagaaagtg
gi|21 : CACAC-CT--AAAGAT--AACTATAACG----C-TAGAG--CTTAAATAGGCTTG--ACCG-TTA-TGG--AAA-ACAGAAAG----TT-----ACGGAAATATAGGGTAAACTTTG-T-AATCCCA-AGT---AA
gi|22 : TGTCAAGAAT--T-T--C-C--AA-TCA-AC-TGAC-G-TAA-GA---ACTC-A-C--AGAATAAAATC--AGAAT---TATTTACAT---AGTTTT-GCA-C-TT---TA-GTGTGAA--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-a
gi|23 : ---AATAAAAG-----TT-AT-TT-TC-CGTAAC-GGGATGACATGTA-T--G-TCC---AT--ATGACAGA-C---GTTTC-G-T-GAG-CA-TCG---------CTAA--T-AT--------
gi|24 : GCTTCTCAATCCA-TTTCTCT-TCAT-CATC--TTTTAGGCT--AACAA-ATGA-C-ATGac
gi|26 : TA--TC---TCATGTACAAATA--TTTTCAA---GA-ACTCGATCA--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-Ctgttttcagtgaaaacagtac
gi|27 : --AATAAAGAT---GCTTGGAAATTG----AC-T-G-TTTTAGGTTT---A-C-TT---T--------ACA-TC-TAATT
gi|28 : AG-----AAA-CTATT--C-TG-C-TG-A--TTTTTA----A-GG-TGCCTATCGGACTTTT-C-A-AT-T-C
gi|29 : G---TT------C-T--AT---------AAAGTTA-G----AC-A--C------GCTAG-ATTGAAA-TACAGAA---CAAACA
gi|3 : CAGCCATTCT---CC-G----C-AAA--GG-GTAAA-T-TAATTTTC-GAAAAAAATGCAAA-A-TTT--GAAAGTA---TGGAGT-GG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----GTAC-ATG-TTG-TGT--ACAT-AATTT--GAAAGTTT-CGCCACAAC------C--TAG-CATAGATTGAT-CACAATCATACACTGACGGCAAACAA-CCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-AT-CAATG-CTGCTAGAGCGGAAACCAGTACTCGACGACAT---G-TTC--TTTAGTTTT-GGAAAGACATTGTATTA-CAAGGGTTGAAAAA-CA-TG-GACAG-------------AT-CAAAAAG--TT-C--A-----TAC--AACGA-------TAA-----AAGTATGCAACTCAG----CGAA--GCTCAATAGTATTA-CTCTCGTTTTT-GTGA--AATTGT-TACAATT-TTTCTACT-TACTTCTTTTTCTCAAATGATTGAACT-AGTATC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTTCGTG-ATGG--TG-TAA-GTAA-CA-G----GA-G--TAAA--TG---------------TACT----------------------GTGTTTTTCAGATA--TG-ACGCT-T-A-----GGTA---TAAG-C-AC--TCTG-T-T-G-TTACGGAGAAATAGT-TAAGTTCT-AGTCA-T-GAA-CA---TTACAATTTAA-CC----ATT-TT--T--CTTG-TTTCG---TATGT---GA---ATC-GCCAA----TCT-AATTG--TTGGAATACACAG-AAATA---A--AACA-TAAAA--GGAACACACT-T------TAGAA---AAAGTAATTTATA-TCAAAG--AAAAGAG-AAAATA-GGTG--AAAATT--TA--AAACTGACTTAA--CAATTCAA---C------ATAATAAAT---AATAATTTT-AACTTC-ATGT-CA-T-AT--TAT---GCA-T-TATTA-ACACT--TGTCC-TTA--GTCTA-G-T------------AACTATGCA-TGTGACTT-----TGTG---------CA-CT--ACACAC-CCTAAAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATAAAGGTTTG--ATCGATTAACGG--TAA-ACGG--TG----TACA-GAACGGAAACACAGAAT-CACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTT-TCAGTCCA-TT--TCTATCATTCGTC--TTTCAAGAT---TCAACATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-CTTTTCAGTGAAAG-A-CAGAA-AA-GGTTGGTAAAG-AATATG-C-TTC-C--GT---AACCAGTAAAATAAAATTTCCAATGCTATTCT-GTCAATTACATTTGA-TTTGTA-TGCATT-ATC------TTGACACAG----CTCG-GAAT-G------TATTTTTAAGA--TTCAT--AA-C-ATAAA--TGTTCATACTA--ATG--TTAATA-TTGGCT-ATTATT---TT-TTTTT---AATA----------T-ATCTT-TCGCGTAACCGGGAT------TA-T--G-TCC---ATCAATGACAAAAC---GTTTC-G-T-GA--CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---AATGT-A-TAT--AA-ATTT--T-AT-TCAT-AAAGT--AG-T-A-C--AATTGGG-CA--T-TAAA--TA---TT------------CTTTTT--ACAGATT---ATTTTAAAATAT---CAC-A-T---CTAT--A---T---A-TACGAG-ATCAATA--------A--C----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CAA--TCAAAT-AACT-TTCA-CAGAGG--TTTATTTTATAT-CG-ATGACCA----AAGAAGGA---AAA----AGT-GT--TTGG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTT----A-AT-T-CCCATTACGGA-A-TGTTTG-ACG-TTAGCGG---------A------GATT-ATTTTTAATAGACTCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTAACAAT--CATAACGTA-TGTTTA--T-AAA-----CGTTG-T---ATCTG---AACTACA--G-G-GTGCT-------G---CT-------------------------------TGCGTT-TGG------------------------AA-AT-----------------TA-------------TAT--G------------AAGA--------T-TT---AAACACT--TTTGT---TTGAAA-TGC-TACC--ACAAATTTTCTGAT-G-AGAT--GT-ATCA--TTAAATT----T-GTCAAGAAT--T-TG-C-C--AACTCACAA-TGA--G-TAA-GA---AACC-A-C--AGAATGAAAACCAAGAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACACCGTG-AC--G--GA-A---T-CA-TGA------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTT-A----A---C-A----TAAC--AATT-CATTAAT-TCC------TTG---TTGGGA-C-TGGTTT-TCACTCGTAAGT-----ATATC-A--A--CAAA-----A-C------T--ATA-----ATA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAA-TT--G----ACAA--C------GCTAGAATTG-AA-CACAGAA---CAGACATTCCTA-AATACAAACAAC---------CTGGCGATAAAAAAAAAAAAATTGGGA-TTTTTATATA-TT----TTTTC-A--TTTCG--AAGAGTTATT--TTAC-GAAA-TACT--AACTAAGATT--GCCTGGAAATTGA---AC-T-GTTTTTATGTTT---AGCGTTAAAT--------ACACTC-TAATTA--ACGTAG-TTGA-TACAGATTT--CT---TTACATAACAACG--CTTTCAG---GA-ATTC----ATCGCATTCTC--TA--TTCTTTT--ACT-GCGA-CATGAA-ATG-TCTAATATACAGT-AACC-ATATACAAGGGGGAATG
gi|30 : T--TCT-AGATAAAGT-AACC-ATATACA--GGAGAACGa
gi|4 : CAGCCATTC-----CCG----C-AAA--GG-GTAAA-T-TAATTTTC-GAAAAAAAAGCAAATA-TTT--GAA-GTA---TGGAG-GGG-ATAAACTGAAAAGT--AA-TTAATG---AAAGAA-G----G-A--ATG-TTGGTGTGTACAT-AATT---GAAAGTTTTGTCCACA-C------A--TAG-CATAGATTGAT--ACAATCATACACTGACGGCAAACAAACCTCCTATT--A-ATTACCCTGTTCACG---------GAACTA--------------TAAGTACAATG-CTGCTA-----------AG-----GACGAC-TG--G-TTC--TTT-GTTTT-TGGAAGACAT-GTATTAACAAGG-TTGAAAAA-CAATT-GACAGT---------------CAAAAAGG-TTAC--A-----TAC--AACGA-------TAA-----A-GTATGCA-CT-AG----CGAAATGT-CAA-AGTATTATCTC-C--TTTT-GTGA--AATT-TGTACAATTATTTCTACT-TACT-CTTTTTCTCAAATGATT--AAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGGCTTG--AA-GTAA-CAAG----GAGA--TAAA--TG----------------ACT----------------------G-GGTTTTCAGATAA-TGGACGCT-T-A-----GGTA-----AG-CCAC--TCTG-T-TCG-TTA-GGA-AAATAGT-TA-GTTCT-AGT-ACT-GCAACA---TTA-CATTTAAACC----ATT-TTATT-TCTTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATT---TTGGAATA-ACAG-AAATAA--A--AACAATAAAA--GAGAA-CAAT-T------TAAGA---AAAGTAATTT-TA-TCAATAGAAAAAGAG-AAAAT--G-TG--AAAATT--TATAAAACTGA-T-AA--CAATTCAA---CAC----ATAATAACA-TTAATAATTT--AACTTC-ATGTA-G-C-AT-ATTT---GCA-TGTATT----ACT--TGTCCATTA--GTCTTAGCT------------AAATATG-----T-ACTT--G--T------------CA-CT--ACACAC-C---AAAGAT--A--TATAAGGA--TC--AGAG--CATATAAAGGTTTG--ATCG-TT--CGG--TAA-ACAGGATG----TACATGAACGGAAACACAGAAT-CACTTTG-T-AATCCCA-AGT---A-TATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAA-----ATCAA-ATGA-C-ACGAAACA---TT---A---AGAAAAATAGGTG--TTTTCAGTGAAAATA-CAGAATAA-GGTTGGAAACG-AATATG-C--TC-C--GT---AAC-AGTAAAAAAAAAGTTCCAATGCTATTCT-GGCAATTA-ATTGCA--TTGTAGTGCATT-ACT------CTGACACAG----CTCGTGAAT-G------TA-TTATA-GA--TTCAT--AA-ATATAAA--TGT-CATA-TA--TTG--TT-AAT-TTGGCT--TTATT---TT-TTTTT---AA------------T-ATATT-TC-CGTAA-CGGGAT------TA-T--G-T-C---AT--ATGAC-AAAC---GTTTC-G-T-G-A-CACTTG---------CTAA--A-ATC-------G--G-ACCTTTG--TGTCTTAAA-AAG---ATTGT---TAT--AA-ATTT--T-AT-TCAT-AAAGT--AG-TTA-C--AATTG---CAATT-AAAA-TTA---TT------------C--TTT--AC--ATT---ATTTT-AAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-AT-AATA--------AACT----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAACAT-AAAC-TTC-ACAGAGGGTTT-ATTTTATAT--G-AT-A-------ACGAAGGA---AAA-T--AGT-GTTCT-TG-CAG-----AAA-CTATT--C-TG-C-TG-A----TTTTT---A-GG-T-CCTATCGGACTTTT-C-A-AT-T-CC-ATTACGGA-A-TGTT-G-ACG-TAAGCGG---------A------GATT-ATTTTTAATAGACTCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAACCATC-T----A---TCGA-ATG-CAGTAACAATCCCGTAACGgctga
gi|5 : AG-AATATG-C-TTT-CCTGT---AAC-AGTAAATCAAAATTTCCAATGCTATTCTCGGCCATTT-AATTGA-TTTGTAAGGCATT-ACT------CTAACACAG-A--CTCATAAAT-AC-----TATTTTCA-GACCTTCAT--AA-A-ATAAA--AGT-CATA-TA--TTGCTTTCAAA-TTTGC--AGTATT---TC-CTTTTTAAAATAAAA------CTTATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGAC-AAAC---GTTTC-GTT-CAA-CA-TCG--------CTTAATCA-AC--------C--G-A-CTTTGGCTGTC-TAAACAAGCATACTG--A-AGTC-AACATTT--T-AT-TCATCCAAGA--AG-TCA-C---ATTGGCAAAATT-TAAACATA---TTCGTCTTATACTACTTTTTTGACA-ATC---ATTTACAAATAT----ACGA-TG--C-ATTAA---CCTGA-TACAAGTATCAATAAAT-----A--CAATAT-AAC---CTTGCATTTTCGTTCAATGGA-----------TA------TGC---------------GCCCA--TAAAATAAAAC-TTCAA-AGAGG--C-----TT-TATCCG-ATGAT------ATGAAGGC---AAA-T--AGT-G---T-GG--AG-----AAACCTATT--CTTG-CTTG-ATTTTTTTTT---A-GG-TGCCTATCAGACTTTT-C-A-AT-T-CC-GTTACGGATC-TATT-ACACGCTTAACGGATATAT---A------GATT-A--TTTAATAGA-TCAAC-ACCTTTCACAA--AAAATC--TACGA-GGCATACCGCTGAA-CATCAT----G---TTGAGATG--AGTACCA----TATAACGTAATGGTTT-ATAAAAAA---CGCTGATAAAATCTGGTGAGG-ACA--G-GCGTACC-------AACTCTAATATTT-----CTCT-----AT-AAA----TGCGCTATGAGTAAACAATAGTTCTTTATATATCAA-AT----------------ACA-------------TAT--G------------AAGA--------TACT---AAACATT--TTTGT---T-GAAA-TGC-AACC--ACAA---TTCTGATAG-AGATTAGT-A-CAA-TTAAATTTTTGTTGTCAGTTATAGT-TGTC-C--AA-TCA-AC-TGACTGTTAATGATATGCCCTATC--AGAATTAAAACAAATAAT---TATTTACATA--AGTTGTG--A-C-TA---TACGTTTA-A--AGTT----AGAAACCACACA-CGTTGAC--GTTGACA---TACA-T-ATGAGGGAC-ATGTGGTT--T---TTAGCGACAGTAG-----GAC--C-ATTTT-ATCT-A---C-C----TAATCTAATTCCAT---T-TCTA-----TTG---GTTGGAGC-AGATTTATCA-TCGTAAGT---A-ATATT-ATTAT-CAAATAAGGA-CA-----T--ATA-----CTA-GTGTAT----GAAAAA--------CGGACTGACCG---TTGTCGTAT-T--AT---------AATGTTATA----AGAA--C------GCTAG-ATTGAAA-CACAGAACATCAAACGATCCTAGAAT--AAACAACA--------CTGGCGAC------------ATT-GGATTTTTTATATA-TTTTTCTCTACTACTTTTTGGAAAGAGTTATTGATTAATGAAA-T-AC--AAT--AGATTCATCATGATAATTGTTCTACAT-G-GTTGA-GTTTGTAG-CGTT--GTTGACTTTGACA-TC--ATTTATTACGTAG-TTGA-TACA-ATTA--CTTAGTTACGTTCAAATGAACATTCGGTCAGATGTTCAG--A--GCA-TCTCATTAATTTTCTTTTGACTAGCAA-TATG-AGATCGTTT-ATATAAAGT-AACTGATAT
gi|6 : AAAAT-----CT-ATTTT-TC--GTAAC-GGGAT------TATT--GTTCC---AT--Atagcagatagaatggtgt
gi|6 : tgatgtaattagtagtccC-AA-ATTT--T-AC-TCAT-CAAGTGAAG-TCA-CG-AATTGAG-CAATT-TAGA-ATA---TTTTCTTAGG----CCTTTT--ACA-TTTTTGATTTTGAACTATGTTCAC-A-TTTAC-AT--AAAAT---AACACAAG-ATCAATATAGATACGA--C----T-TAC---CT---GC-------------AGTCTGTCCAATTCAGATTATGC---------------G-ACAGTTACAAT-AAACCTTCAACAGAGG--CT-ATTTT-TAT-CG-ATAATGGTCATATGAAGGATATAAA-TTTGGTTGT--G-GGTCAGTTTATGGA-TTATTTCC-TC-C-TG-A--AATCTT------AG-TGCCTATCAGACTTTTTC-A-AT-TTCC-GTTACG---A-TAT--A-ACG-TTA-CGG---------ATATATAGATT-ATTTT-AATAGA-TCAAC-A-CTTTTACAACAAAATCT--TACGA-GGCAT-CCGGTGAA-CATC-TATG-A---TTGA-ATG--AGTAC--AT---ATAACGT-ATGTTTT-AT-AAAAA---CG-TG-T---ATCTGGTGAG--ACA----G-GTACC-------GC--CTAATC-TT-----CTCT-----ATAAAA----TGCGTTATGG------------------------AACATAGTTCCTTTAAACAAGACA-------------TAT--G------------AAGA--------T-TT---AAACA-T--TTTGT---T--AAA-TGC-AACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA--TAAA-T----TTGTCAAGAAT--T-TT-T-CCAAA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-CCAGGAATAAAAAC--AAAAT---TATTTACAT---AGTGGTTGCA-CTTATT-TA-GTGTG-A--A--TCTACGAGA-----GAA-CGTT-ACCTG--GA-ATTCT-TA-T-C------AC-ATG----TGGTGTGTGAGCG--AG-AGCGCGCG----C-ATTTT-A--C-AAGCC-AACTTCAA---AATTCCA--AAT-TCTCTTTGATTG---TGGGTAGCATGTCTT-TCA-TCGT-AGTTTAA-ATATC-AT-ATTCTTA-----C-CA-----T--GTAGATTTGTA-TTATGAGTTAAAAAAA--------CA-------CGAT-TT------CTT--ATACTTATATCAAAGTTA-G----AC-A--C------GCTAGGATTTAAA-CACAGAA---CATATATgttagtactcgagaatattcgtgtgtcaagcttagcgaacctaatacgcttttgtttaactaggtcagagaactctctatgtgagtgatctatataaatatgtaatgagcaaattttactcatcaagtgaagtcacgaattgagcaatttagaatattttcttaggccttttacatttttgattttgaactatgttcacatttacataaaataacacaagatcaatatagatacgacttacctgcagtctgtccaattcagattatgcgacagttacaataaaccttcaacagaggctatttttatcgataatggtcatatgaaggatataaatttggttgtgggtcagtttatggattatttcctcctgaaatcttagtgcctatcagactttttcaatttccgttacgatataacgttacggatatatagattattttaatagatcaacacttttacaacaaaatcttacgaggcatccggtgaacatctatgattgaatgagtacatataacgtatgttttataaaaacgtgtatctggtgagacaggtaccgcctaatcttctctataaaatgcgttatggaacatagttcctttaaacaagacatatgaagatttaaacattttgttaaatgcaaccacaatttctgatagagatgtatcaataaatttgtcaagaatttttccaaatcaaatgacgtaagaacccaccaggaataaaaacaaaattatttacatagtggttgcacttatttagtgtgaatctacgagagaacgttacctggaattcttatcacatgtggtgtgtgagcgagagcgcgcgcattttacaagccaacttcaaaattccaaattctctttgattgtgggtagcatgtctttcatcgtagtttaaatatcatattcttaccatgtagatttgtattatgagttaaaaaaacacgatttcttatacttatatcaaagttagacacgctaggatttaaacacagaacatatata
gi|7 : tgatgtaattagtagtccaaaatctatttttcgtaacgggattattgttccatagttagtactcgagaatattcgtgtgtcaagcttagcgaacctaatacgcttttgtttaactaggtcagagaactctctatgtgagtgatctatataaatatgtaatgag--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATa
gi|7 : TC-TAGAG--CATATAAAGGTTTG--ATCG-TTA-CGG--TAA-ACAGGATG----TACA-TAACGGAAACACAGAATACACTTTG-T-AATCCCA-AGTA--AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCATTT-CTC-ATCA-TCGTC--TTTCAAGAT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG--TTTTCAGTG-AAA-A-CAGAA-AA-GGTTGG-AAAG-AATATG-C-TTC-C--GT---AAC-AGTAAATAAAAATTTCCAATGCTATTCT-GGCAATTA-A-TTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTGAAT-G------TA-TTTTA-GA--Tannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctagagcatataaaggtttgatcgttacggtaaacaggatgtacataacggaaacacagaatacactttgtaatcccaagtaaatattgctcaagagtagagtttatctacaaaatgcttctcagtccatttctcatcatcgtctttcaagatatcaaatgacacgaaacatttaagaaaaataggtgttttcagtgaaaacagaaaaggttggaaagaatatgcttccgtaacagtaaataaaaatttccaatgctattctggcaattaattgatttgtatgcattactctgacacagactcgtgaatgtattttagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggactttgtgtctaaaaagatgtaatatcaaattttattcataaagtagtcacaattggcaatttaaaatattctttttacattattttaatatcacatcatatatacgagatcaataactaacctatatctgcgccataaataaacttcaacagaggttattttatcgatgaaagaaggaaaatagtgttggcagaaactattctgctgattttttaggtgcctatcggacttttcaattccattacggaatgttgacgttacggga
gi|7 : aaaatttaaaactgactaacaattcaaccatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--------G--G-A-CTTTG--TGTC-TAAA-AAG---A-TGT-AATATC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGC--AATT-TAAA-ATA---TT------------CTTTTT--ACA--TT---ATTTTAA--TAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAA-T-AAAC-TTCAACAGAGG--TT-ATTTT--AT-CG-ATGA-------AAGAAGGA---AAA-T--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A---TTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-ATTACGGA-A-TGTT-G-ACG-TT-ACGG---------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggactttgtgtctaaaaagatgtaatatcaaattttattcataaagtagtcacaattggcaatttaaaatattctttttacattattttaatatcacatcatatatacgagatcaataactaacctatatctgcgccataaataaacttcaacagaggttattttatcgatgaaagaaggaaaatagtgttggcagaaactattctgctgattttttaggtgcctatcggacttttcaattccattacggaatgttgacgttacggga
gi|8 : aaaatttaaaactgactaacaattcaaccatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctagagcatataaaggtttgatcgttacggtaaacaggatgtacataacggaaacacagaatacactttgtaatcccaagtaaatattgctcaagagtagagtttatctacaaaatgcttctcagtccatttctcatcatcgtctttcaagatatcaaatgacacgaaacatttaagaaaaataggtgttttcagtgaaaacagaaaaggttggaaagaatatgcttccgtaacagtaaataaaaatttccaatgctattctggcaattaattgatttgtatgcattactctgacacagactcgtgaatgtattttagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATAACGTAATGTTTA--T-AAAAA---CGT-G-T---ATCTG---AGATACA--G-G-GTGCT-------G---CT-------------------------------TGCGTTATGG------------------------AA-AT----------------A---------------TAT--G------------AAGA--------T-TT---AAACACT--TTTGT---T-GAAA-TGC-TACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCAAGAAT--T-TG-C----AA-TCA-AA-TGAC-G-TAA-GA---AACC-A-C--AGAATAAAA--CAAAA-T---TATTTACAT---AGTTTTG-CA-C-TA---TA-GTGTG-A--AA-T----AAAA-----ACA-CGTG-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA--G-AG-----G----CCATTTT-A--C-A---CCA----TAA---A-TT-CAT-AAT-TCC------TTG---TTGGGAGC-TGGTTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----ATA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----AC-A--C------GCTAG-ATTGAAA-CACAGAA---CAGACATTCCTA-AAT--AAACAACA--------CTGGCGAC------------ATT-GGA-TTTTTATATATTT----TCTTC-AC-TTTC-GAAAGAGTTA-T--TTAA-GAAA-TAAC--AATAAAGA-T--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTTAAAT--------ACA-TC-TAATT---ACGTAG-TTGA-TACA-ATTA--CT---TTACATACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATAC-AGGGGGAATGga
gi|9 : CAGCCATTCT---CCCG----CAAAA--GG-GTAAA-T-gc
gi|9 : ACTGACGG-----AA-CCT---ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-GC---ATG-CT-CTA-----------AG-----GACGACGTG--G-TTC--TTTAGTTTT-TGGTAGACAT-GTATTA-CAAGGG-TGAAAAA-CA-TT-GACAGTTTTAGATACGTTGT-CAAAAA-G-TTAA--A-----TAT--ATCCA-------TAG-----Annnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaactgacggaacctattaattaccctgttacggaacatagcatgctctaaggacgacgtggttctttagtttttggtagacatgtattacaagggtgaaaaacattgacagttttagatacgttgtcaaaaagttaaatatatccatagatgattaaatgttttacgataaagtatgc
blockSeqs : T . A . A . . A A AG . A A TA ATA . A . . ACAGGACC . T TGT . T T CCAC G T GC CAAAC A CCT CA C C . T ATACTTGTACATTGTAGG G G GAGCGGAAACCAGTACTC A C G . A A T A GT . A . TTTAAATACGTTTT ACACTGA CC A . TTAA A C TATA AT T T T T . T G A G . A T . T . . . C G CT T A A GAAAA . GTAAGGGTTTTCAGATAAT C A A G A T . TT . C . G C CG AG A AA . C C C . G A . A AT GT . . A CT . . CA GC C . GCGA A A A AA AAA A A . A AT G . . TA C T AC CCATAG AT T . A TT A . TG AAC . A AT TAGCT CA TG GGGTGTGGTGTTGTGC . A . CTA AAC AA AC A G C AA A A . . A G TACATG AA . G C AAA C . T T A T . C A C G G C CTGGGAG T A TA T . A A . C . . CT . C C C C T T G G A CTAGAG ACT GTAAAAT T A CC T . GA G . T C GT CT AAAT G TAT C . C TAA G AAAACCC T G C G TC GACATG T . T CGG CA A AC T T . AA C C TCA ACC A C GC T C CAT A TAA CA C GA . C CC GA A C G CA . CA . CGTCTTATACTACT TG AGA TTG A A TGTTC G TTTA T TA AAATAA T TAGATACGACTTACCTGCAGTCTGTCCAATTCAGATTATGC C GT C A C GTTT T AT C A TGGTCAT TAT TTT T TCT T TTTAT C TCC T T . TTTT GT C . T A . . T C TC TG C AG TATATAGTA . T C A C CA T . . A C A AATGA C G CAATCCC ATA . CTGATAAA GTGAGG GCG C AACTCTAATATTTCTCTATAAATGCGCTATGAGTAAACAATAGTTCTTTATATATCAAATACATATG . A . T . TGA T . TT . AT . TA . G T TTTG AG A TTCCA C C . T T T TAT T T CA A ACCA TAA A GG . T TT C AATCTAC ACCAC C G CT TT C TTC A . G TGAGGG . TGGTGTG ACAGTAGGAC C C TCT TCC C ACTT A TCT A C TT . CTTTGA . A A C TAAA ATTAT ACATGGTT . GATTTG . AGTTA CGGACTGA AT GTCGTA T . ACTTATATC T . GACCC A C CAT G AC A . AAAAAAAAAAAAA G T T TTTC T T TGGA TTGA T . AT A TTCA TTCT A . TT T GTAGCG GTTGACTTTG C T ATTA A G G . TAG AA TCA T GATC TC T A AT T TG A C A G CG A . G AAG
blockSeqs : T . . . . . . . T TA . . . T GA . . . . GTAC . G T . T T ACC . T C CAAAC . C . . . . . TAAGTACA . G AG A G . . . A . . GT . . . TTTAGATACGTTGT GTTACA . T . AA A . . AA T . . . . A G T . . . T . . . . . . . . T . . GAGA . TACT C A . . . . . AT . . . . . G A . T . . . . . C A . . . T . . . T . . A . . . GCGA . A A T . A . . A T . . . . C . . CAC T T . A T A . T T . . . TGT A G TGTG . . . T A AA AC . G T . . . . . G A TACAG AC . . . A . . . . A T . C A . . . C TTTA C A A . . T A . . . . . . . A . . T C . A . . A AC T . . A . AT G . . . A . AATA G TT T . . . A AG . C . . CC . . . . . . G CA . . . AA . C AT CG . . . . . . A TCA C . . . . A . . . . C . A . TTCTTAGGCC . AA . C A TC . TG . . CCTGA . AATACAATATAACCTTGCATTTTCGTTCAATGGATATGC . . A . . TTT T AT . . CCA . TT . TT . . . CT . . . GA TT . . . . . . . . T AC . AG ATATATA . T C . . . T . . . . . ATGA G C CAATC AT . TTGT GTGAG G . GCCTAATCTTCTCTATAAAATGCGTTATGGAACATAGTTCCTTTAAACAAGACATATG . . . T . . . . A . . . . . T . . . . GTCC . . . . T . . . . . A ACAA . . TG . . . . AAGTT . . . . . . . . . . . . TGGTTT AGAGCGCGCG . . CA AGC . . A C A C T . A . . . . TTAA ATATT TAAGGACA . CA . T CAT . . . . AA . . AAC A . . . A A . A . . . . . . CGA TT . . . A TT A . . T G AGCG AAAT . . AA . . . . . . . . AG . . . . C . A . . . G . . . AG
blockSeqs : T . . . . . . . A A . . . G A . . . . GA . . . . . . CA . . . . . . . . . . . TAATCA . . AG G G . . . A . . GT . . . AT GTTAAA . A . A . . . AT . . . . . T . A . . . T . . . . . . . . T . . GAG . ACT T T . . . . . T . . . . . C A . T . . . . . . . . . . T . . . T . . A . . . AA . A . T . T . . A A . . . . C . . CC T T . A T . . T . . . . AGT . T GT . . . T A AA A . . A . . . . . A G TACAT A . . . . . . . . A T . A A . . . C TTTA . . A . . A C . . . . . . . T . . T T . . . . A A T . . A . A T . . . T . CAAA G AG T . . . T AT . A . . CC . . . . . . A AC . . . AG . C A G . . . . . . A TAA C . . . . A . . . . G . A . CT . AT . G A TC . T . . TA . ACTTGCCTGTATTCTGTCAATCAGATTATGCG . . A . . CT T C . . T . T . T . . . C . . . TT TT . . . . . . . . A G . AA ATATATA . T . . . . A . . . . . A . C CAT T . TGT AACT G . GCTAATCTCTACAAATGCGTTATGGAAACATAGTCTAAACAAGAGTATTGG . . . C . . . . T . . . . . T . . . . GCC . . . . . . . . . . T CA . . G . . . . AAAT . . . . . . . . . . . . AT ACAGGC . . C T . . A . T . T . . . . . . A AAA ACA . C . . AAG . . . . . . . AAC G . . . . A . A . . . . . . GG A . . . A T . . . G T ACG AAAT . . A . . . . . . . . . . . . . T . A . . . . . . . A
blockSeqs : . . . . . . . . . . . . . . . TAGC . . AG . . . . . T . . T . . . . TTACA . A . A . . . . . . . . . T . . . . . . . . . . . . . . . . . . T . . . . . A . . . . . G A . A . . . . . . . . . . . . . . . . . . . . . A . . . . . T . . . . . . . . C . . CC . . . . C . . A A . . . A . . . . . A G TT C . . . . . . . . . . . A A . . . . TTA . . A . . . A . . . . . . . A . . T G . . . . A A T . . A . A T . . . . . AAT G G T . . . T T . C . . C . . . . . . A AC . . . AA . . T G . . . . . . T TA C . . . . A . . . . G . T . CT . A . A A TC . T . . TA . AACTTAACCTATATCTGC . . A . . CT T T . . . . T . T . . . C . . . TT TT . . . . . . . . A G . A A . . . . . . T . . . . . A . . CAT T . TGT AGAT G . GCTTGCGTTTGGAAATTATATG . . . T . . . . A . . . . . T . . . . GC . . . . . . . . . . A AC . . G . . . . AAAT . . . . . . . . . . . . TT ACATGT . . C C . . A . A . T . . . . . . A AA CCA . A . . CAG . . . . . . . AC . . . . . A . A . . . . . . GG T . . . T T . . . T T AC T . . A . . . . . . . . . . . . . . . A . . . . . . . A
blockSeqs : . . G . . . . TTCA . T . . . . . . . C . . A . . . . . . . T C . . . . . . . . . . . . . . A . . . A . . . . . . . C . . A T . . . . A A T . . A . C T . . . . . . . . . . . . T A . T . . C . . . . . . A AC . . . A . . T C . . . . . . C T C . . . . A . . . . C . A . CT . A . . A T . T . . TA . ACTAACCTATATCTGC . . A . . TT . T . . . . T . G . . . C . . . AA TT . . . . . . . . A A . A A . . . . . . . . . . . . G . . AT . . TGT GT . . GCTTGCGTTATGGAAATATATG . . . C . . . . A . . . . . T . . . . CC . . . . . . . . . . G AC . . G . . . . AAAT . . . . . . . . . . . . TT AAAGGC . . C . . . A . A . T . . . . . . A AA ACA . C . . CAG . . . . . . . AC . . . . . . . A . . . . . . CG . . . . A T . . . . . AC T . . A . . . . . . . . . . . . . . . A . . . . . . .
blockSeqs : . . . . . . . . A . . . T . . . . A G . . . . . A T . . . . . . . . . . . . C . . . . . . . G . . . A . . A G . . . . . . . A . . . . . C . . . . . . A . A . A . . . . . . . . TA . ACTAACCTATATCTGC . . . . . C . . . . . . . . T . . . C . . . T A . . . . . . . . A G . A . . . . . . . . T . . . . . . . . . . GC . . . . . . . . . . T TC . . G . . . . AAAT . . . . . . . . . . . . TT AAGAGG . . C . . . A . A . T . . . . . . A AA AC . A . . CA . . . . . . . AC . . . . . . . A . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . G . . . . . . . . C . . . . . . . C . . . A . . A . . . . . A . . . . . . . . C . . . C . . . . T . . . . . . . . . . . CC . . . . . . . . . . A AC . . G . . . . AAA . . . . . . . . . . . . TT ACAGG . . C . . . . . . . T . . . . . . . AA . . . . . . . AC . . .
blockSeqs : . G . . . . GC . . . . . . . . . . A CA . . G . . . . AAT . . . . . . . . . . . . TT AGAGG . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . T . . G . . . . . . . . . . . . .
blockSeqCons : T*** **** ** ***** ********* TANTCA**************** G** ** GT GTTACA******** ******* A****** ** T*** T* ** ***** T**** ** G** A* T* *** **** *** *** A*** GA**** A** ******** A* ** ** CC******** T* T** A**** AA A** ** ** TACAT***** C* *** ** A** TTA********* C* A** *** A*** G******* ** ** ** AAAA* T*** *** A****** ** AC*** AA* ********* G********** A* ** N* *** AA* TC*** T**** TA******* TT** ***** C*** TT*** A** ATATATA********* ** ** A******* C* T*** *** GTGA*** G*** ******** *** ** A* ** GC***** *** NC** *** G* *** AAAT******** TT********* ANAGGC*********** *** *** A**** AA***** ACA*********** ** CAG************* *** ** **** AC********* ** ******** A************ GG** T*** ACG**** GAT********* ** AG*
originalCons : CAGCCATTCT---CCCG----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAANGCAAA-A-TTT--GAA-GTAG--TGGAGTAGG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----G-AC-ATG-TTGNTGT--ACAT-AATTT--GAAAGTTTTCGCCACA-C------C--TAG-CATAGATTGAT-CACAATCATACACTGACGGCAAACAA-CCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A--------------TA-GC-CGATG-CTGCTA-----------AG-----GACGACATN--G-TTC--TTTAGTTTT-TGGAAGACAT-GTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TGT-CAAAAAGG-TTAC--A-----TAC--ANCGA-------TAA-----AAGTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATTGTGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-T--AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGG--TG-TAA-GTAA-CAAG----GA-A--TAAA--TGGT-------------TACT----------------------GCGATTTTCAGAAAA-TG-ACGCT-T-A-----GGTA---TAAG-C-AC--TCTG-T-T-G-TTACGGA-AAATAGT-TA-GTTCT-AGT-A-T-GAAACA---TTA-AATTTAAACC----ATT-TT--T-TCTTG-TTTCG---T-TGT-TGAA---ATC-GGCAA-A--TCTTAATTG--TTGGAATA-ACAG-AAATAGCGA--AACA-TAAAA--GAGAAACAATAT------TAAAA---AAAGTAAATT-TA-TCAAAAGAAAAAGAG-AAAATA-G-TG--AAAATT--TA--AAACTGACT-AA--CAATTCAA---C-C----ATGATAACT-TTAATAATTTT-AACTTC-ATGTACA-T-AT-ATAT---GCA-T-TATTT-A-ACT--TGCCC-TTA--GTCTAAG-T------------AAATATG-A-TGTGACTT--G--TGTG---------CA-CT--ACACAC-CT--AAAGAT--A--TATAAGGA-CTC-TAGAG-GCATATANAGGTTTG--ATCG-TTA-CGG--TAA-ACGGGATG----TACA-GAACGGAAACACAGAATACACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAGGCT--ATCAA-ATGA-C-ACGAAACAT--TT---A---AGAAAAATAGGTG-TTTTTCAGTGAAAA-A-CAGAA-AA-GGTTGGAAAAG-AATATG-C-TTC-C--GT---AAC-AGTAAATNAAAATTTCCAATGCTATTCT-GGCAATTA-ATTTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-G------TATTTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TA--TTG--TTAAAA-TTGGCT-AGTATT---TT-TTTTT---AANAAAA------CT-ATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGACAAAAC---GTTTC-G-T-GAA-CA-TCG--------CCTAA--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---ANTGT-A-TGTC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGGC-CAATT-TAAA-ATA---TT------------CTTTTT--ACA-ATT---ATTTTAAAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-NAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAAAT-AAAC-TTCAACAGAGG--CT-ATTTT-TAT-CG-ATGA-------ATGAAGGA---AAA-T--AGT-GT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-GTTACGGA-A-TGTT-G-ACG-TTAACGG---------A------GATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTACCAAT--CATAACGTAATGTTTA-AT-AAAAA---CGTTG-T---ATCTGGTGAGGTACA--G-G-GTACC-------G---CTA----TT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AT----------------ACA-------------TAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-NACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCAAGAAT--T-TG-C-C--AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAATAAAAACCAAAAAT---TATTTACAT---AGTTTTGGCA-C-TA---TA-GTGTG-A--A--T----AAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCGA-AG-AG-----G----C-ATTTT-A--C-A---C-A----TAA---AATT-CATTAAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----NTA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTTA-G----ACAA--C------GCTAGAATTGAAA-CACAGAA---CAGACATTCCTA-AATA-AAACAACA--------CTGGCGAC-----------AATT-GGA-TTTTTATATA-TT----TCTAC-AC-TTTCGGAAAGAGTTATT--TTAA-GAAA-TAAC--AATAAAGATT--GCCTGGAAATTG----AC-T-G-TTTTATGTTT---A-CGTT--AT--------ACA-TC-TAATTA--ACGTAG-TTGA-TACA-ATTA--CT---TTACGTACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTCCTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATACAAGGGGGAATG
finalCons : CAGCCATTCT---CCCG----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAANGCAAA-A-TTT--GAA-GTAG--TGGAGTAGG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----G-AC-ATG-TTGNTGT--ACAT-AATTT--GAAAGTTTTCGCCACA-C------C--TAG-CATAGATTGAT-CACAATCATACACTGACGG-----AA-CCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-ATANTCA----------------ATG-CTGCTA-----------AG-----GACGACATG--G-TTC--TTTAGTTTT-TGGAAGACAT-GTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TGT-CAAAAAGGTTACA--------TAC--ANCGA-------TAAA------GTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATTGTGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TCT---AATAT-CAGAGT-AAAAACAT-TTCGA-TGT-CATTT-GTG-ATGG--TGT-AA-GTAA-CAAG----GA-A--TAAA--TGGT-------------TACT----------------------GCGATTTTCAGAAA--TG-ACGCT-T-A-----GGTT----AAG-C-AC--TCTG-T-TG--TTACGGA-AAATAGT-TT-GTTCT-AGT-A-T-GAAACA---TTA-AATTTAAACC----ATT-TT--T-TCTTG-TTTCG---T-TGT-TGAA---ATC-GGCAAA---TCTTAATTG--TTGGAATA-ACAG-AAATAGA----AACA-TAAAA--GAGAAACAAT--------TAAAA---AAAGTAAATT-TA-TCAAAAGAAAAAGAGA-AAATA-G-TG--AAAATT--TA--AAACTGACT-AA--CAATTCAACC--------ATGATAACT-TTAATAATTTT-AACTTC-ATGTACAT--AT-ATAT---GCA-T-TATTT-A-ACT--TGCCC-TTA--GTCTAAG-T------------AAATATG-A-TGTGACTT--G--TGTG---------CA-CT--ACACAC-CT--AAAGATA----TATAAGGA--TC-TAGAG--CATATANAGGTTTG--ATCG-TTA-CGG--TAA-ACGGGATGTACAT-----AACGGAAACACAGAATC-ACTTTG-T-AATCCCA-AGT---AATATTG-CTCAAGAG---TAGAGTTTATCTACAAAATGCTTCTCAGTCCA-TT-CTCTATCATTCGTC--TTTCAGGCTA--TCAA-ATGA-C-ACGAAACATTA---------AGAAAAATAGGTGC-TTTTCAGTGAAAAA--CAGAA-AA-GGTTGGAAAAG-AATATG-C-TTC-C--GT---AAC-AGTAAATNAAAATTTCCAATGCTATTCT-GGCAATTA-ATTTGA-TTTGTA-TGCATT-ACT------CTGACACAGA---CTCGTAAATG-------TATTTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TA--TTG--TTAAAA-TTGGCT---TATT---TT-TTTTT---AANAAAA------CT-ATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGACAAAAC---GTTTC-G-T-GAA-CA-TCG---------CTAA--A-ATG----------G-A-CTTTG--TGTC-TAAA-AAG---ANTGT-A-TGTC-AA-ATTT--T-AT-TCATA-AAGT--AG-TCA-C--AATTGGN-CAATT-TAAA-ATA---TT------------CTTTTT--ACAA-TT---ATTTTAAAATATC---AC-AT----C-AT--ATA-------TACGAG-ATCAATA--------A--C----T-NAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAAAT-AAAC-TTCAACAGAGG--CT-ATTTT-TAT-CG-ATGA-------ATGAAGGA---AAATT--AGT-GT--T-GG-CAG-----AAA-CTATTC---TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-GTTACGGAA--TGTT-G-ACG-TTAACGGATATATA---------GATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-TA-------TCGA-ATGC-AGTACCAAT--CATAACGTAATGTTTAT---AAAAA---CGTTG-T---ATCTGGTGA---ACAG---G-GTACC-------G---CTA----TT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AT----------------ACA-------------TAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGCA-ACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCAAGAAT--T-TGC-----AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAATAAAANC--AAAAT---TATTTACAT---AGTTTTG-CA-C-TA---TA-GTGTGAAAT--------AAAA-----ACA-CGTT-AC--G--GA-A---T-CA-T-A------AC-ATGTT---------TAAGCGANAGGC-----------C-ATTTT-A--C-A---C-A----TAA---AATT-CATTAAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGTA----ATATCAA-----CAAAACA-----------T--ATA-----NTA-TTATG-----GAAAAACAG-------------CCG---TT------C-T--AT---------AAAGTTA-G----ACAC---------GCTAGAATTGAAA-CACAGAA---CAGACATTCCTA-AAT--AAACAACA--------CTGGCGACA------------TT-GGA-TTTTTATATA-TT----TCTAC-AC-TTTGG--AAGAGTTAT---TTAA-GAAA-TAAC--AATAAAGATT--GCCTGGAAATTG----AC-T-G-TTTTATGTTTACG----TTGAT---------ACA-TC-TAATTA--ACGTAG-TTGA-TACA-ATTA--CT---TTACGTACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTCCTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATATACAG-GGGGAATG
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|25 ): GGACTTAAAATCTGTTATCTTTTATCTTTCGAGATGAATTCAATAAAGTCAATCATATGTAAAAGCAATG
Unaligned ( gi|31 ): GGATATATAGATTATTTTAATAGATCAACA
Alignments
lowQualScore : 11111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 1111 11 1 111 11 1 333 11 1111 11 1 111 1 222222222 1 1 111 1 111 44444444444 1 11 444444 333 11 333333333 6666666666666666 2 333333333333333333 11 11 666666666666666 11111111111111 2222222 33333333 1 1111 1 11 1 11 1 11 1111111111 11 11111111111111111111111111111111111111111 11 111 333333333 111 11 111 111 1 1 1111 11 222 111 1111 11 11 1111 11 1 4444444444 22222 2222 111 1111 1111 111 111 333333333 1 11 2222 555555555555 2222222 5555555555555555 111 11 111 11111 11111 222222 1 111111 2 111 111 2 1 1 111 44444444444 2 111 111 1 1 111111 1111 22222222 1 22 11111 33333 111 111 2222222 1 1 1 11 111111 11111 1 333333333333333333333333333 111 2222 1 11 22 44444444444444 111 111 1 11111 11111 111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111 1 3333333 111 1 11111 1111 11111 1 11 1 1 11 33333333 2 11 2222222 111 22222222 333333 1111 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 22222222 111 111 11 1111 111 1 111 1 111 111 11111 111111 111111 11111111111 11111111111111 444444444444444 2 111111 1 11111 1111111 22222222222222 222222 22222 2222222222222222 111 111111 222222222 11111111111111 1 22222222 222222222222 1111 111 11111 1111 33333333333333 1111 33333 22 111 111 2222 1 11
lowQualScore : 4444 7777 8 11 8 8 8 5 1 111 33 0 222 00 4444 33 0 777 0 444444444 0 0 777 0 777 3 22222222222 0 3 22 333333 111 11 8 8 222222222 8 8 7777777777777777 8 0 999999999999999999 3 99 11 0 8 1 6 6 99 6 6 6 666666666666666 88888888888888 99 1 1111111 11111111 0 8 7777 11 0 8 0 8 8 11 1 0 6 8 0 8 8 88 11 8 8 8 8 8 8 6 11 88 8 8 0 9999999999 33 00000000000000000000000000000000000000000 3 0 8 11 000 8 8 222222222 666 8 8 11 8 8 8 8 8 0 8 777 8 8 8 8 0 444 6 0 7777 8 11 88 88 222 88 444 8 9999 0 11 8 8 11 7777 8 0 11 0 1111111111 00000 1 8 8 0 2222 8 99 99999 2 6 99 111 6 4444 88 0 8 8 3 8 4444 777 111 111111111 0 33 3333 111111111111 2222222 6666666666666666 111 33 8 8 444 33333 22222 000000 6 1 99 6 6 99 6 0 2 666666 6 6 1 0 6 6 6 888 0 8 0 444 0 5 5 99 2 000 6 6 6 6 66666666666 2 0 6 7 222 6 6 3 8 5 5 5 5 77 000 5 1 5 5 9 2 0 0 5 444444 2222 00000000 7 5 66 1 77 555 1 77 5 1 55 77 33333 1 77777 1 111 6 000 6 0 4444444 0 0 5 0 33 444444 5 66 5 888 66 5 00000 5 5 5 777 5 0 333333333333333333333333333 5 5 77 5 5 000 6 1111 77 5 66 5 5 88 66 0 5 11 22 5 55 888 88888888888888 66 333 000 0 1 99999 5 99999 5 77 555555555 5 0000000000000000000000000000000000000000000000000000000000000000000000000000000000 5 77 8 5 5 1111111 1 5 5 4444444 0 000 9 77 8888 5 77777 5 8888 5 5 5 6666 22222 5 5 5 5 5 5 5 1 999 666 5 11 888 5 1 5 5 2 1 5 5 55 3 99 6 6 6 6 11111111 0 0 77 4444444 6 6 99 6 111 00000000 999999 4444 6 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 00000000 5 000 2 77 000 5 5 33 77 77 5 77 5 1 5 0000 777 8 1 666 4 4 4 4 2 4 111 4 4 55 4 4 2 4 99 777 111 8 4 4 4 222 4 22222 111111 4 4 55 55 4 777 4 4 4 222222 4 44444444444 4 1 55555555555555 4 7777 000000000000000 8 9 4 777777 777 4 0 4 0 99999 5555555 22222222222222 77 111111 5 00000 2222222222222222 555 444444 5 66 666666666 888 88888888888888 5 7 5 5 5 888 0 5 77 00000000 999999999999 5 5 5 6 4444 6 6 888 6 77777 7777 6 77 1 6666 44444444444444 6 6 4444 6 00000 5 5 5 55 6 6 6 000 77 77 000 5 0000 77 5 5 77 6 77 1 5 6 6 33 5 6 6 99 6 1
lowQualScore : .... .... . .. . . . . . ... .. . ... .. .... .. . ... . ......... . . ... . ... . ........... . . .. ...... ... .. . . ......... . . ................ . . .................. . .. .. . . . . . .. . . . ............... .............. .. . ....... ........ . . .... .. . . . . . .. . . . . . . . .. .. . . . . . . . .. .. . . . .......... .. ......................................... . . . .. ... . . ......... ... . . .. . . . . . . . ... . . . . . ... . . .... . .. .. .. ... .. ... . .... . .. . . .. .... . . .. . .......... ..... . . . . .... . .. ..... . . .. ... . .... .. . . . . . .... ... ... ......... . .. .... ............ ....... ................ ... .. . . ... ..... ..... ...... . . .. . . .. . . . ...... . . . . . . . ... . . . ... . . . .. . ... . . . . ........... . . . . ... . . . . . . . . .. ... . . . . . . . . . ...... .... ........ . . .. . .. ... . .. . . .. .. ..... . ..... . ... . ... . . ....... . . . . .. ...... . .. . ... .. . ..... . . . ... . . ........................... . . .. . . ... . .... .. . .. . . .. .. . . .. .. . .. ... .............. .. ... ... . . ..... . ..... . .. ......... . .................................................................................. . .. . . . ....... . . . ....... . ... . .. .... . ..... . .... . . . .... ..... . . . . . . . . ... ... . .. ... . . . . . . . . .. . .. . . . . ........ . . .. ....... . . .. . ... ........ ...... .... . ..................................................................................................................................... ........ . ... . .. ... . . .. .. .. . .. . . . .... ... . . ... . . . . . . ... . . .. . . . . .. ... ... . . . . ... . ..... ...... . . .. .. . ... . . . ...... . ........... . . .............. . .... ............... . . . ...... ... . . . . ..... ....... .............. .. ...... . ..... ................ ... ...... . .. ......... ... .............. . . . . . ... . . .. ........ ............ . . . . .... . . ... . ..... .... . .. . .... .............. . . .... . ..... . . . .. . . . ... .. .. ... . .... .. . . .. . .. . . . . .. . . . .. . .
lowQualScore : 8888 0000 0 00 0 0 0 5 0 000 88 0 888 22 8888 88 0 555 0 888888888 0 8 000 0 000 2 88888888888 0 2 55 000000 000 00 0 0 000000000 0 0 6666666666666666 0 0 000000000000000000 8 00 00 8 0 4 7 7 88 7 7 7 777777777777777 88888888888888 22 0 7777777 00000000 6 0 0000 88 6 0 8 0 0 00 4 0 0 0 8 0 0 88 00 0 0 0 0 0 0 0 00 88 0 0 8 7777777777 88 88888888888888888888888888888888888888888 2 8 0 00 000 0 0 000000000 888 0 0 00 0 0 0 0 0 8 0 444 0 0 0 0 8 000 0 6 0000 0 00 88 88 000 88 000 0 8888 8 00 0 0 22 0000 0 8 00 6 2222222222 00000 4 0 0 8 8888 0 22 33333 5 7 22 777 7 2222 88 8 0 0 8 0 2222 555 000 222222222 0 88 5555 222222222222 2222222 8888888888888888 000 88 0 0 888 00000 55555 000000 7 0 22 7 7 22 7 7 0 888888 7 7 7 0 7 7 7 333 8 0 8 000 0 5 5 22 5 888 7 7 7 7 77777777777 5 3 7 3 999 7 7 5 4 7 7 7 7 99 000 7 0 0 0 8 0 0 0 0 444444 4444 66666666 3 0 99 7 99 999 3 99 7 4 00 99 11111 0 22222 7 777 7 000 6 1 6666666 0 8 0 0 22 444444 0 99 0 888 11 1 11111 0 0 0 222 0 0 555555555555555555555555555 7 7 99 7 7 000 6 0000 55 0 99 0 0 11 99 0 0 99 44 0 44 888 11111111111111 99 000 000 6 7 33333 7 44444 7 99 666666666 7 6666666666666666666666666666666666666666666666666666666666666666666666666666666666 7 99 4 7 7 3333333 4 7 7 3333333 6 000 0 99 0000 7 55555 0 1111 0 0 0 9999 22222 0 0 0 0 0 0 0 4 666 000 7 00 888 0 4 7 7 0 4 7 7 88 5 22 7 7 7 7 00000000 7 0 55 8888888 7 7 22 7 777 55555555 555555 2222 7 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 77777777 7 000 3 99 000 7 7 66 99 99 7 99 7 4 0 6666 888 9 1 555 0 0 0 0 0 0 000 0 0 55 0 0 7 0 55 000 000 0 0 0 0 555 0 44444 333333 0 0 55 55 0 000 0 4 4 888888 4 33333333333 4 0 99999999999999 4 9999 111111111111111 9 1 4 222222 888 4 1 4 0 66666 8888888 44444444444444 99 000000 7 00000 4444444444444444 666 444444 0 99 999999999 888 99999999999999 0 4 0 0 0 888 7 7 99 77777777 333333333333 7 7 7 7 2222 7 7 333 7 77777 3333 7 99 7 8888 55555555555555 7 7 2222 7 77777 7 7 7 33 7 7 7 000 99 99 000 7 0000 99 7 7 99 0 99 7 7 7 7 66 7 7 7 22 7 0
consensus : CAGCCATTCT---CCCG----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAANGCAAA-A-TTT--GAA-GTAG--TGGAGTAGG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----G-AC-ATG-TTGNTGT--ACAT-AATTT--GAAAGTTTTCGCCACA-C------C--TAG-CATAGATTGAT-CACAATCATACACTGACGGCAAAC-AACCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A-TAG-T----CA-------ATG-CTGCTA-----------AG-----GACGACAT--GGTTC--TTTAGTTTT-TGGAAGACAT-GTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TGT-CAAAAAGG-TTAC--A-----TAC--ANCGA-------TAA------A-GTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATTGTGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTT-GTG-ATGG--TGT-AA-GTAA-CAAG----GA-A--TAAA--TGGT-------------TACT----------------------GCGATTTTCAGA-AA--TG-A-CGCT-T-A---------GGT-T-AAG-C-ACT--CTG-T-T-GTT-ACGGA-AAATAGT-T-T-GTTCT-AGT-A-T-GAAACA---TTA-AATTTAAACCAT----T-TT--T-TCTTGTTT-CGT---TGT-TGAA---ATCGG-CAA-A--TCTTAATTG--TTGGAATA-ACAGAAA-TAG-AAA----CA-TAAAAG--AGAAACAAT--------TTAAAA-----AAAGTAAATT-TA-TCAAAAGAAAAAGAGAAAA-TA-G-TG--AAAATTT--A--AAACTGACT-AA--CAATTCAA---C-CAT----GATAACT-TTAATAATTTTAA-CTTCA-TGTACAT-A-TA-TAT---GCAT-T-ATTTA-A-CT--TGCCC-TTA--GTCTNAG-TAA------------ATATG-AT-GTGACTTG----------TGT--GC-A-CT--A-CACAC-CT--AAAGAT--A--TATAAGGA-TC-T----AGAG-CATATANAGGTTTGA--TCG-TTA-CGG--TAA-ACGGGATGTACAT-AACGGAAA-CAC-AGAATACACTTTG-T-AATCCCA-AGTAA---TATTGC-TCAAGAGTAG---AGTTTATCTACAAAATGCTTCTCAGTCCATTTCTCTATCATTCGTC--TTTCAGGCT--ATCAA-ATGA-C-ACGAAACATT----A------AGAAAAATAGGTGTTTTT-CAGTGAAAA-A-CAGAA-AAGG-TTGGAAAAGAA-TATG-C-TTC-C--GT---AAC-AGTAAATNAAAATTTCCAATGCTATTCT-GGCAATTA-ATTTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-G------TATTTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TA--TTG--TTAAAA-TTGGC-T---TATT---TT-TTTTT---AANAAAA------CT-ATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGACAAAAC---GTTTC-G-T-GAA-CA-TCGC-TA---------A--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---ANTGT-A-TGTC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGG--CAATT-TAAA-ATA---TT------------CTTTTT--ACA-ATT---ATTTTAAAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-NAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAAAT-AAAC-TTCAACAGAGG--CT-ATTTT-TAT-CG-ATGA-------ATGAAGGA---AAATTAG--TGT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-GTTACGGA-A-TGTT-G-ACG-TTAACG---G-ATATA-TAGATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTACCAAT--CATAACGTAAT-G-TTT--AT-AAAAA---CGTTG-T---ATCTGGTGAG--ACA--G-G-GTACC-------G---CTA----TT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AT----------------ACA-------------TAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-NACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCA---AGAATT-TGC---AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAAT-AAA-AAC-AA--AAT---TATTTACAT---AGT-TTTG-CA-C-TA---TA-GTGTGAA---A-TAAAA-----ACAC-GTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCG-ACA----G-G---C---CATTTT-A--C-A---CA----TAA---AATT-CA-TAAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----NTA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTT---AG-------AC-A---C-GCTAGAATTG-AAA-CACAGA-A---CAGACATTCCTA-AAT--AAACAACA--------CTGGCGAC------------AT-T-GGA-TTTTTATATA-TT----TCTAC-ACT-TT---GG-AAGAGTTA-T---TT-AA-GAAA-TAACA--ATAAAGATT--GCCTGGAAATTG----AC-T------G-TTT-TA----TGTTTA-C-TT-AATA-CA-TC-TAATTAACGTAG-TTGA-TACA-ATTACT---TT--ACGTACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTCCTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATAT--AC-AGGGGGAATG
Reference ( family-1054 ) : CAGCCATTCT---CCCG----C-AAA--GG-GTAAA-T-TAATTTTCAGAAAAAAANGCAAA-A-TTT--GAA-GTAG--TGGAGTAGG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----G-AC-ATG-TTGNTGT--ACAT-AATTT--GAAAGTTTTCGCCACA-C------C--TAG-CATAGATTGAT-CACAATCATACACTGACGG------AACCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A-TAN-T----CA-------ATG-CTGCTA-----------AG-----GACGACAT--GGTTC--TTTAGTTTT-TGGAAGACAT-GTATTA-CAAGGGTTGAAAAA-CA-TT-GACAGTTTTAGATACG-TGT-CAAAAAGG-TTAC--A-----TAC--ANCGA-------TAA------A-GTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATTGTGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTT-GTG-ATGG--TGT-AA-GTAA-CAAG----GA-A--TAAA--TGGT-------------TACT----------------------GCGATTTTCAGA-AA--TG-A-CGCT-T-A---------GGT-T-AAG-C-ACT--CTG-T-T-GTT-ACGGA-AAATAGT-T-T-GTTCT-AGT-A-T-GAAACA---TTA-AATTTAAACCAT----T-TT--T-TCTTGTTT-CGT---TGT-TGAA---ATCGG-CAA-A--TCTTAATTG--TTGGAATA-ACAGAAA-TAG-AAA----CA-TAAAAG--AGAAACAAT--------T-AAAA-----AAAGTAAATT-TA-TCAAAAGAAAAAGAGAAAA-TA-G-TG--AAAATTT--A--AAACTGACT-AA--CAATTCAA---C-CAT----GATAACT-TTAATAATTTTAA-CTTCA-TGTACAT-A-TA-TAT---GCAT-T-ATTTA-A-CT--TGCCC-TTA--GTCTAAG-TAA------------ATATG-AT-GTGACTTG----------TGT--GC-A-CT--A-CACAC-CT--AAAGAT--A--TATAAGGA-TC-T----AGAG-CATATANAGGTTTGA--TCG-TTA-CGG--TAA-ACGGGATGTACAT-AACGGAAA-CAC-AGAAT-CACTTTG-T-AATCCCA-AGTAA---TATTGC-TCAAGAGTAG---AGTTTATCTACAAAATGCTTCTCAGTCCATT-CTCTATCATTCGTC--TTTCAGGCT--ATCAA-ATGA-C-ACGAAACATT----A------AGAAAAATAGGTGCTTTT-CAGTGAAAA-A-CAGAA-AAGG-TTGGAAAAGAA-TATG-C-TTC-C--GT---AAC-AGTAAATNAAAATTTCCAATGCTATTCT-GGCAATTA-ATTTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-G------TATTTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TA--TTG--TTAAAA-TTGGC-T---TATT---TT-TTTTT---AANAAAA------CT-ATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGACAAAAC---GTTTC-G-T-GAA-CA-TCGC-TA---------A--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---ANTGT-A-TGTC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGG-NCAATT-TAAA-ATA---TT------------CTTTTT--ACA-ATT---ATTTTAAAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-NAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAAAAT-AAAC-TTCAACAGAGG--CT-ATTTT-TAT-CG-ATGA-------ATGAAGGA---AAATTAG--TGT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-GTTACGGA-A-TGTT-G-ACG-TTAACG---G-ATATA-TAGATT-ATTTTTAATAGA-TCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTACCAAT--CATAACGTAAT-G-TTT--AT-AAAAA---CGTTG-T---ATCTGGTGA---ACA--G-G-GTACC-------G---CTA----TT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AT----------------ACA-------------TAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-AACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCA---AGAATT-TGC---AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAAT-AAA-ANC-AA--AAT---TATTTACAT---AGT-TTTG-CA-C-TA---TA-GTGTGAA---A-TAAAA-----ACAC-GTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCG-ANA----G-G---C---CATTTT-A--C-A---CA----TAA---AATT-CATTAAT-TCC------TTG---TTGGGAGC-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----NTA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTT---AG-------AC-A---C-GCTAGAATTG-AAA-CACAGA-A---CAGACATTCCTA-AAT--AAACAACA--------CTGGCGAC------------AT-T-GGA-TTTTTATATA-TT----TCTAC-ACT-TT---GG-AAGAGTTA-T---TT-AA-GAAA-TAACA--ATAAAGATT--GCCTGGAAATTG----AC-T------G-TTT-TA----TGTTTA-CGTT-GATA-CA-TC-TAATTAACGTAG-TTGA-TACA-ATTACT---TT--ACGTACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTCCTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATAT--AC-AGGGGGAATG
gi|1 : AGCCATTCTTCTCCCGAAAAC-AAAAAGG-GTAAAATGTAATTTTCAGAAAAACCCGCAAA-A-TTTCGAAA-GTGGATTGGAGTAGG-A--AACTGAAAAGTTAAA-TAAATGGAAAAAGAAAG----G-AC-ATGATTGATGT--ACATTAATTTTTGAAAGTTTTCGCCACA-TATACCAC--TAG-TATAGATTGAT-CACAATCATATACTGACGG------AACCT---ATT--A-ATTACCCTGTT-ACGCCAGCGGGGGAAC-A-TAG-C-------------ATG-CT-CTA-----------AG-----GACGACATTTGGTTCCTTTTAGTTTT-TGGTAGACAT-GTA--A-CAAGG--TGAAAAAACA-TTCGACAGTTTTAGATACGCTGT-CAAAAAGGCTTAC--AGTATATGC--ATAGAATGTTTTTAACGGATAG-GTATGCAACT-A-----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-TTGATGAAATGTGTA-AATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAATCAGT-TCGTAGAATATGCAGAGC-AAAAACATGTTTGATTGTCCATTT-GTGCATGG--TGTTAA-GTAA-CAAGTCGAAA-A--TAAACCTGGT-------------TACTTTCTGGTTTAAAAAGATGAGTAGCGACTTTCAGA-AAAGTG-AACGCT-T-AAACTTGATAGGT-T-AAGTC-ACTTTCTG-T-T-GTTTACGGA-AA-TAGG-TAT-GTACTCAGT-A-T-GAAACGACCTTA-AATCTAAACCATAAATT-TT--T-TCTTGTTTTCGTCCTTGT-TTGATATATCGGGCAA-AATTTTTCATTG--TTGGAATA-ACAGAAAATAG-AAAAGAACA-TAAAAAGAAGAAACAATATTTCCAAT-AACA-----AAGGTTAATT-TAGTCAAAAGAAATAGAGAAAAATA-G-TGTCGAAATTTCTA--AAACTG--T-AA--CAATTTAAAATC-CAT----GATAACT-TTAATAATTTTAAACTTCAATGTGCAT-AATAATATTCGGCAT-TTATTTA-AACTGGTGCCC-CCG--GTCTAAA-TAAGTCTTCAGTAAAATATG-ATTGTGACTTG----------TTTTTGC-ATCTTAA-CACACTCT--AAAGATTGA--TATA--GA-TC-TCTAAAGAG-CATATACAG--TTGA--TTG-TTA-CGGAATAACATGGAATG-ATTT-TACGGAAAACAT-AGAATACACTTTGAT-AAATCCA-ATAAA---TAT-GC-TCAAGAGTAATAAAGTTTAT--ATCAAATGCTTCTCAATTCATTTCTCT-TCAT-CGTCCTTTTCAGGCTTAGTCAA-ATGA-C-ATGAAGAATT----GTTAGAGAAAAAAATAGGTGTTTTTTCAGTGAAAA-CTCAGAA-AAGGGTTGGAAGAGAAATATG-CATTCGC--GTGAAAAC--GTAAATCAAAATTTCCAATTATATTCT-GGCAATTG-AATTGATTTTCCA-TGCATT-ACT------CTAACACAGTA--CGCGTAAATAA------TATTTTAA-GA--TTCATACAA-A-AGAAAATTGT-CATAGTAT-TTG--TTAAAATTTGAC-TGAGTATTTCCTT-TTTCT---AAAAAAA------CTGATCAT-TCACGTAA-CGTGAT------TA-TAAG-TCC---AT--ATAACAAAACTTTGTTCT-G-TAGAATCA-TCGC-TATATATCCTTA--A-ATATTTTCTCG--G-A-CTTTG--TGTC-TACA-AAG---ATTGCAA-TGTC-AA-ATTT--TAAT-TCAT--AAGT--AGTTCA-CAGAATTGG--CGATTATAAA-ATAGCTTT------------GGTTTT--AGC-ATT---ATTTGAATATA----AAC-AGT---C-AT--A---T---ACTACGAG-ATCAATA--------T--C----TGTACATGTT---ATCTTGTCA------A-----------TCAGATTATGC---------------G-CCA--TAAAAC-AAAC-TTCAACATGGG--CT-ATTGT-TAT-CG-ATGA-------ATGAAGGA---AAATAAG--TGT--T-GG-CAGA----AAA-CTAAT----TG-C-TGCG--TTTTTGTAAAA-GGTTGCCTATCGGACTTTT-C-AGATGT-CCAGTTACTGA-ATTATT-G-ACG-TTTACGGCTG-ATATA-TAGATTAATTTTTAATATA-TC-AC-A-CTTTCACAAT-TAGTTTTGTACGAGGGCAT-CCGGTGAG-CATG-T----AGTGTTGAGATGACGGT-C--AT--CATAACGTAAT-G-TTTAGAT-AAAAAAATCGGTG-----ATCTGGTGAAGTACA--GTG-GTACCTCGGGTGG---CTA----TTTGTTGCTCCTGGGAAC-AAATGGCTGCTTTTTGG------------------------AA-A-----------------ACA-------------TAC--GTTCCTTTAATACAAGACATGGAAGT-TTTAAAAACATTGATTTGT---T-GAAACTGCTAACCGTACAA--TTTCTAATAGAAGAT--GTAATCAA-TTAAATT----TTGTCA---AAAATT-TGCAA-AA-TCA-AATTGAT-GTTAA-GAG--ACCC-A-C--AGAAT-AGATAACAAA--AAT---TATTTACATCCCAGCATTTG-CAGC-TAAACTA-GTGTGAAG--A-TAAAA-----ACAC-GTT-AA--G--GA-A---T-CAGC-A------ACAATG----T--TAA-TAAGCGTCCA----G-GTTTC---CATTTT-A--C-AGCCCA----TAA---ATTT-CA-TAATCTCC------TTGATTTTGGGAGT-TGATTT-TCATTCGTAAGT---ACATATCAA--A--CAAAC----ACCA-----TCCATA-----CTAGTTATC-----GAAAAGAAGAGAATCAG-----GCGCGTTT------C-TAAAT---------AAAGAT---AGAGTAAGAAC-AGGGCGGCTAGATCTGAAAA-TACAGAGA---TGGA--------------GACCAACACTTGGGGCCTGGCGAC------------ATCT-GGA--TGTTATATA-TT----TCTAC-ACTGTT---GGAAAGAGTTA-T---TTAAA-GAAAGTAACA--ATAAAGAT
gi|10 : A-TTAAATT----TTGTCA---AGAATT-TGC---AA-TCA-TT-TGAC-G-TAA-GA---ACCC-A-C--AGAAT-AAA-A-C-AA--AAT---TATTTACAT---AGT-TTTG-CA-C-TA---TA-GTGTGAA---A-TAAAC-----ACAC-GTT-AC--G--GA-A---T-CA-T-A------AC-ATA----A--T---TATGCG-ACA----G-G---C---CATTTT-A--C-AT--CA----T-A---AATT-CA-TAAT-TCC------TTG---TTGGGAGC-TGA-AT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----CTG-TTATG-----GAAAAA--------CAT-----CCG---TT------C-T--AT---------AAAGTT---AG-------AC-A---C-GCTA-AATTG-AAA-CACAGA-A---CAGACATTCCTA-AAT--AAACAACA--------CTGACGAC------------AT-T-GGA-g
gi|11 : -------------TAAT----------------------ACGATTT-CAGA-AA--TG-A-CGCT-TTA---------GGT-T-AAG-C-ACT--CTGGT-T-GTT-ACGGA-AAATAGT-T-T-GTT-T-AGT-A-T-GAAACA---TTA-AATTTAA-CCGT----T-TT--T-TCTTGTTT-CGT---TGT-TGAA---ATCGG-CAA-A--TCTTAATTG--TTGGAATA-ACAGAAA-TAG-CGA----AA-TAAAAG--AGAAACAAT--------A-AAAAAAAAAAAAGTAAATT-TA-TC-AAAGAAAAAGAGAAAA-AATG-TG--AAAATTT--A--AAACTGACT-AA--CAATTCGA---C-CAT----GCTAACT-TTAATAATTTTAA-CTTCA-TGTACAT-
gi|12 : atggcactggttttcagaA-------------CAT--G------------AAGA--------T-TT---AAACATT--TTTGT---T-GAAA-TGC-AACC--ACAG--TTTCTGATAG-AGAT--GT-AGCAA-TTAAATT----TTGTCA---AGAATT-TCC---AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-T--AGAAT-AAA-A-C-AA--AAT---TATTCACAT---AGT-TTTG-CA-C-TA---TA-GTGTGAA---A-TAAAA-----GCAC-GTT-AC--G--GA-A---T-CA-T-A------AC-ATA----T--T---TAAGCG-ACA----T-G---T---CATTTT-A--C-AC--CA----T-G---AATT-CA-TAAT-TCC------TTG---TTGGGAGC-AGATTT-
gi|13 : gttagacaatatgcctttaagcaagCCTG-AAT--AAACAAAA--------CTGGCGAT------------AC-T-AGA-TTTTTGTAGA-TT----TATAC-ACT-TT---GG-AC------------------AAA-TAACATAATAAAA--T--GTCTCGAACTT------T-TA-----G-TTT-TA----TGTTCA-T-TT-CACA-CA-T---AATCG-TGTAG-ATGA-TACA-ATGATT---TTTTATGCAAAAAAA--CTTTCAG----A-ACTT----A--AAA-TCTG-TTA--T-CCTTT--ACTTTCGA-CATG-A-AT--TCA-ATA-AAAGTCAACC-ATAT--GT-AAAGGCAATG
gi|14 : AT-GTATTA-CAAGGGT-GAAAAA-CA-TT-GACAGT---------------CAAAAAG--TTAC--A-----TAC--AACGA-------TAA------A-GTATGCAACT-AG----CGAAATGTTCAA-AGTATTATCTC-CGTTTTT-GTGA--AATT-TGTACAATTATTTCTACT-TACTTCTTTTTCTCAAATGATTGAAAT-AGT-TC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTT-GTG-ATGG--TGT-AA-GTAA-CAAG----G
gi|15 : C---AA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-C--AGAAT-AGG-AT--AA--AAT---TATTTACAT---AGT-TTTG-CA-C-CG---TA-GTGTGAA---A-TAAAA------CAC-GTT-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCG-AAA----G-G---C---CATTTT-A--CAA---CA----T-A---AATT-CA-TGAT-TCC------TTG---TTGGGAGG-TGATTT-TCA-TCGTAAGT---A-ATATC-A--A--CAA
gi|16 : AG-A--ATCGTAAAT-A------CGTTTTGA--A--TTCTT--AA-A-AGAAA--TGC-CGTA-TAA-TTG--TT-----TTG-------TACT---TCCTTTTT---AAGAAAAAAACCCCT-ATGTTCTC-GGTAATC------------A-T--C-TCCCGGAC--ATAACAAAG----GTTTC-G-T-GAA-CA-TTGC-TA---------A--A-
gi|17 : A-CA-TC-TAATTA-CGTAG-TTGA-TACA-ATTACT---TT--ACATACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATAT--AC-A-GGAGAATG
gi|18 : gAA-A-CAGAA-AAGC-TTGGAAA-GAA-TATG-C-TTC-G--GT---AAC-AGTAAATCAAAATTTCCAATGCTATTTG-GACAATTA-A-TTGA-TTTGTA-AGCATT-ACT------CTATCACAG-A--CTCATAAAT-A------TATTTTg
gi|19 : T--ATGA-GAAAC---GTTAA-G-T-GAA-CA-TCAC-TA---------A--T-AT--------ACCG-A-CTTTG--TGTA-TAAA-TA----AATGTAA-TGTC-AA-TTTT--C-AC-TCAT-AATGT--AG-TCG-C--AATTGG--CAATT-TAAG-ATA---TT------------CTTTTT--ACA-ag
gi|2 : CAGCCATTCT---CCCG----C-AAA--AGAGTAAA-T-TAATTTTCAGAAAAAAAAGCAAA-AGTTT--GAA-GTAA--TGGAGTAGGGA--AACTGAAAAGT--AAATAAATG---AAAAAA-GACAGG-ACCATC-TTGTTA---ACAT-CATTT--GAAAGTTTTCGCCACA-C------CACTAGGTA-AGATTAATGCACAATCATACA-TGACGG------AACCT---ATTCAACATTACCCTGTT-ACG---------GAAC-AATAC-TTGTACATTGTAGGATGGCT-TTA-----------AG-----GTCGACATC-GGCTC--TTTAGTTTTATGGAAGACAT-GTATTA-CAAGGGTTTGAAAA-CA-TT-GACAGTTTTAAATACG-TTTTCAAAAAGA-C-ACTGA-----TACCCATAGA-------TAATTA---A-ATGTACA--T-AGTATACGATAAGT--AA-AATGTTATTTC-CGTTTTTTGTGA--AAATGTGTACAATTTTTATCACTGTACTTCTTTTTCTCATATTATTGAAAT-AGT-TC--A--ATAT-CAGAGTTAAAAACAT-TTTGAT-GTC-ATTT-TTGGATGT--TTT-AAAGTAAACAAG----GA-AAATAAA--TGGTAAGGGTTTTCAGATAAT----------------------ACGATTATCAGA-AA--TG-G-CGCTAT-A---------GGT-TTAAG-C-ACT--CTG-TCT-CGT-ACGGA-AAATAATAT-T-CTTCT-AGT-A-TCGAAACA---TTAGAATTTAGACCAT----TATT--TGTATTGTT--CGT---TGTCTGAA---ATCTG-CAACA--TCTTAATTGGCTTG-AATA-ACAGAAA-TAGCGAA----CA-TAAA-G--AGAA-CAAT--------T-AGAA-----AAAGTAAATT-TA-TCAAAAGAAAAAGAGAAAT-T--G-TG--AAAATTT--A--AAACTGACT-AAACCAATTCAA---C-CATAGATGATAACCATTAATAATTTTAA-CTTCA-AATACATTA-TA-TAT---GCAT-T-AATTA---CA--TGCCC-TTAATGTCTT-G-TAA------------ATATG-AT-G-GACTTGGGTGTGGTGTTGT--GCCA-CT--AACAAAC-CT--AAAGAT--A--TATAGAAC-TCAT----AGAG-CATATACAGGTTTGAAATCG-TTA-CGG--AAA-ACAG-ATGT---T-A-CGGAAA-CATTAG------CTTTG-TGAATCCCACAGTAAAAATATTGCCTCAAG-GTAG---AGTTTGTCTACAAAATGCTTCTCAATCCATT-CTCT-TCA-TCGTC---TTCAGGCT--ATCAA-ATGAGCGATGAAA-ACTGGGAG------AGAAAAATA--TGTTTTT-CA-TG-AAA-A-CAGAA-AAGG-TTGG--AAGAA-TATGCC-TTC-C--GT---AAC-AGTAAATAAAAATTTTC-ATGGCA-TCT-GGCAATTA-ATTCGAGTTTGTA-TGCATTAACTCTAGAGCTGAT-CAG-ACTCTCGTACAT-GTAAAATTATTTTTA-GA--CTC-T--AAGA-AGAAA--TGT-CATA-TAGTTTG--TTAAAT-TTGGT-G---TA------T-TTCCT---AAAAAAT------CT-AT-TT-TC-CGTAA-CGGGAT------TA-T--G-CCC---TA--ATGACAAACA---GTTTCTG-T-G-A-CA-TCGC-TA---------A--ATAC--------G--GAA-CTTTG--TGTC-TAAA-AAA---GACGTCA-TGTCAAA-ATTTGAT-ATCTCAT-AAAGT--AGATCACC--AATT-G-CCAATT-TAAA-ATA---TA------------A--TTT--AC--ATT---ATTTT-TAATA-----AC-A-----C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-TGC---CT---GT-------------AT----------TC------TGTCAATCAGATTATGCGG-CCA--T-AAAT-AAAC--TCAACAGAGG--CT-A--TT-CAT-CGAATGA-------ATAAAGGA---AAATTAG--TGT--T-GG-CAG-----AAA-CTATT--C-TGTT-TG-A--GAGGTGT---ACGG-TGCCTATCGGACTTTT-CAA-AT-T-CC-ATTACGAA-T-TATT-G-ACG-TT-ACG---GTATATAGTAGGTT-A-TTTTAATAGA-TCAACAA-CTTTCA-AA--TAA-TT--TACGA-GACAT-CCGGTGAA-CATT-TAATGA---TTGACATG-GAGTACCA----TATAACGTAAT-G-TTT--A--AAAAA---CG-TG-T---ATCT-GT-----ACAGCG-G-GTACT-------G---CTA----AT-----CTCT-----AC-AAA----TGCGTTATGG------------------------AA-AC----------------ATAGTCTAAACAAGAGTATTGG------------AAGA--------T-TT---AAACATT--TTTGTTGAT-GAAA-TGCTTACC--ACAA--TTTCTGATAG-CGAT--GT-ATCAATTTAAATT----GTGTCA---AGAATTATGC---AA-TCA-AA-TGAC-GTTAA-GA---ACCC-C-A--AGAAT-TAA-AAC-AA--AATTAATATATACAT---AGT-TTTG-CA-C-TA---TA-GCGTGAA---A-TA-------------------------A-A---T-CA-T-A------AC-ATG----T--T---TAAGCG-ACA----G-G-------CATTTTCG--C-ATCCCA----TAA---ATTT-CA-TGAT-TCC------TTG---TT-GGAGC-TATTTT-CCA-TCGTAAGTTAAA-ATATCAA--A--CAAA-----A-CATGGTTT--ATAC----ATA-TTATG-----AAAAAA--------AAG-----CCG---TT------C-T--ATAA-------AAAGTT---AG-------AC-GACCC-GCTAG-ATTG-AAACCACAGA-A---CAGACATTC------T--AAATAACA--------CTGGCAGC------------AT-T-GGA-TGTTTG-ATG-TT----TCTAC-ACT-TT---GG-AAGAGTTA-A---TT-AA-GAAA-TAACA--ATAAAGA-T--GCCTGGAAATTG----GC-T------G--TT-TA----TG-TTA-C-TT---TA-CA-TCTTAATT-ACGTAGATTGAGTACC-AATACT---TT--ACATACAAACG--TTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TTTCTTT--ACTAGCGACCATG-A-AT--TCT-ATAT
gi|20 : AAAATTTCCAATGCTATTCT-GGCAATTG-GTT-GA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTAAAT-A------TA-TTTTA-GA--TTCAT--AA-A-ATAAA--TGT-CATA-TAT-TTG--TTAcatattacagaaagtg
gi|21 : -CACAC-CT--AAAGAT--AACTATAACG---C-T----AGAG-CTTAAATAGGCTTGA--CCG-TTA-TGG--AAA-ACAGAAAGT---T--ACGGAAA-TAT-AGGGTAAACTTTG-T-AATCCCA-AGTAA---
gi|22 : TGTCA---AGAATT-TCC---AA-TCA-AC-TGAC-G-TAA-GA---ACTC-A-C--AGAAT-AAA-ATC-AG--AAT---TATTTACAT---AGT-TTTG-CA-C-TT---TA-GTGTGAA---A-TAAAA-----ACAC-GTT-AC--G--GA-A---T-a
gi|23 : ---AATAAAAG-----TT-AT-TT-TC-CGTAAC-GGGATGACATGTA-T--G-TCC---AT--ATGACAGA-C---GTTTC-G-T-GAG-CA-TCGC-TA---------A--T-AT--------
gi|24 : GCTTCTCAATCCATTTCTCT-TCAT-CATC--TTTTAGGCT--AACAA-ATGA-C-AT-----------------------------GTG-TTTT-CAGTG-AAA-A-CAGac
gi|26 : TATC---TC--ATGTACAAATA--TTTTCAA---GA-ACTCGATCA--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-Ctac
gi|27 : A--ATAAAGAT---GCTTGGAAATTG----AC-T------G-TTT-TA----GGTTTA-C-TT---TA-CA-TC-TAATT
gi|28 : AG-----AAA-CTATT--C-TG-C-TG-A--TTTTTA----A-GG-TGCCTATCGGACTTTT-C-A-AT-T-C
gi|29 : G---TT------C-T--AT---------AAAGTT---AG-------AC-A---C-GCTAG-ATTG-AAA-TACAGA-A---CAAACA
gi|3 : CAGCCATTCT---CC-G----C-AAA--GG-GTAAA-T-TAATTTTC-GAAAAAAATGCAAA-A-TTT--GAAAGTA---TGGAGT-GG-A--AACTGAAAAGT--AA-TAAATG---AAAGAA-G----GTAC-ATG-TTG-TGT--ACAT-AATTT--GAAAGTTT-CGCCACAAC------C--TAG-CATAGATTGAT-CACAATCATACACTGACGGCAAAC-AACCTC--ATT--A-ATTACCCTGTT-ACG---------GAAC-A-TAA-T----CA-------ATG-CTGCTAGAGCGGAAACCAGTACTCGACGACAT--G-TTC--TTTAGTTTT-GGAAAGACATTGTATTA-CAAGGGTTGAAAAA-CA-TG-GACAG-------------AT-CAAAAAG--TT-C--A-----TAC--AACGA-------TAA------AAGTATGCAACTCAG----CGAA--GCTCAATAGTATTA-CTCTCGTTTTT-GTGA--AATTGT-TACAATT-TTTCTACT-TACTTCTTTTTCTCAAATGATTGAACT-AGTATC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTTCGTG-ATGG--TGT-AA-GTAA-CA-G----GA-G--TAAA--TG---------------TACT----------------------GTGTTTTTCAGA-TA--TG-A-CGCT-T-A---------GGTAT-AAG-C-ACT--CTG-T-T-GTT-ACGGAGAAATAGT-T-AAGTTCT-AGTCA-T-GAA-CA---TTACAATTTAA-CCAT----T-TT--T--CTTGTTT-CGTA--TGT---GA---ATCGC-CAA----TCT-AATTG--TTGGAATACACAGAAA-TA--AAA----CA-TAAAAG--GAACACACT--------TTAGAA-----AAAGTAATTTATA-TCAAAG--AAAAGAGAAAA-TA-GGTG--AAAATTT--A--AAACTGACTTAA--CAATTCAA---C--AT----AATAAAT---AATAATTTTAA-CTTCA-TGT-CAT-A-T--TAT---GCAT-T-ATTAACA-CT--TGTCC-TTA--GTCTA-G-TAA------------CTATGCAT-GTGACTT-----------TGT--GC-A-CT--A-CACAC-CCTAAAAGAT--A--TATAAGGACTC-T----AGAGGCATATAAAGGTTTGA--TCGATTAACGG--TAA-ACGG--TGTACAG-AACGGAAA-CAC-AGAAT-CACTTTG-T-AATCCCA-AGTAA---TATTGC-TCAAGAGTAG---AGTTTATCTACAAAATGCTT-TCAGTCCATT--TCTATCATTCGTC--TTTCAAGAT---TCAACATGA-C-ACGAAACATTT---A------AGAAAAATAGGTGCTTTT-CAGTGAAAG-A-CAGAA-AAGG-TTGGTAAAGAA-TATG-C-TTC-C--GT---AACCAGTAAAATAAAATTTCCAATGCTATTCT-GTCAATTACATTTGA-TTTGTA-TGCATT-ATC------TTGACACAG----CTCG-GAAT-G------TATTTTTAAGA--TTCAT--AA-C-ATAAA--TGTTCATACTA--ATG--TTAATA-TTGGC-TAT-TATT---TT-TTTTT---AATA----------T-ATCTT-TCGCGTAACCGGGAT------TA-T--G-TCC---ATCAATGACAAAAC---GTTTC-G-T-GA--CA-TCGCCTA---------A--A-AT--------G--G-A-CTTTG--TGTC-TAAA-AAG---AATGT-A-TAT--AA-ATTT--T-AT-TCAT-AAAGT--AG-T-A-C--AATTGG-GCA--T-TAAA--TA---TT------------CTTTTT--ACAGATT---ATTTTAAAATAT---CAC-A-T---CTAT--A---T---A-TACGAG-ATCAATA--------A--C----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CAA--TCAAAT-AACT-TTCA-CAGAGG--TTTATTTTATAT-CG-ATGACCA----AAGAAGGA---AAA--AG--TGT--TTGG-CAG-----AAA-CTATT--C-TG-C-TG-A--TTTTTTT---A-GG-TGCCTATCGGACTTT----A-AT-T-CCCATTACGGA-A-TGTTTG-ACG-TTAGCG---G-A-------GATT-ATTTTTAATAGACTCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAA-CATC-T----A---TCGA-ATG-CAGTAACAAT--CATAACGTA-T-G-TTT--AT-AAA-----CGTTG-T---ATCTGAACT---ACA--G-G-GTGCT-------G---CT-------------------------------TGCGTT-TGG------------------------AA-AT-----------------TA-------------TAT--G------------AAGA--------T-TT---AAACACT--TTTGT---TTGAAA-TGC-TACC--ACAAATTTTCTGAT-G-AGAT--GT-ATCA--TTAAATT----T-GTCA---AGAATT-TGCC--AACTCACAA-TGA--G-TAA-GA---AACC-A-C--AGAATGAAA-ACC-AAG-AAT---TATTTACAT---AGT-TTTGGCA-C-TA---TA-GTGTGAA-----TAAAA-----ACACCGTG-AC--G--GA-A---T-CA-TGA------AC-ATG----T--T---TAAGCG-AAG----A-G---G---CATTTT-A----A---CA----TAAC--AATT-CATTAAT-TCC------TTG---TTGGGA-C-TGGTTT-TCACTCGTAAGT-----ATATC-A--A--CAAA-----A-C------T--ATA-----ATA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAA-TT----G-------ACAA---C-GCTAGAATTG--AA-CACAGA-A---CAGACATTCCTA-AATACAAACAAC---------CTGGCGATAAAAAAAAAAAAAT-TGGGA-TTTTTATATA-TT----TTTTC-A-T-TT---CG-AAGAGTTATT---TT-AC-GAAA-TACTA--ACTAAGATT--GCCTGGAAATTGA---AC-T------GTTTT-TA----TGTTTAGCGTTAAATA-CACTC-TAATTAACGTAG-TTGA-TACAGATTTCT---TT--ACATAACAACG--CTTTCAG---GA-ATTC----ATCGCATTCTC--TA--TTCTTTT--ACT-GCGA-CATGAA-ATG-TCTAATATACAGT-AACC-ATAT--ACAAGGGGGAATG
gi|30 : T--TCT-AGATAAAGT-AACC-ATAT--AC-AGGAGAAa
gi|31 : G---G-ATATA-TAGATT-A-TTTTAATAGA-TCAAC-A-cggctga
gi|4 : CAGCCATTC-----CCG----C-AAA--GG-GTAAA-T-TAATTTTC-GAAAAAAAAGCAAATA-TTT--GAA-GTA---TGGAG-GGG-ATAAACTGAAAAGT--AA-TTAATG---AAAGAA-G----G-A--ATG-TTGGTGTGTACAT-AATT---GAAAGTTTTGTCCACA-C------A--TAG-CATAGATTGAT--ACAATCATACACTGACGGCAAACAAACCTCCTATT--A-ATTACCCTGTTCACG---------GAACTA-TAAGTA---CA-------ATG-CTGCTA-----------AG-----GACGAC-T--GGTTC--TTT-GTTTT-TGGAAGACAT-GTATTAACAAGG-TTGAAAAA-CAATT-GACAGT---------------CAAAAAGG-TTAC--A-----TAC--AACGA-------TAA------A-GTATGCA-CT-AG----CGAAATGT-CAA-AGTATTATCTC-C--TTTT-GTGA--AATT-TGTACAATTATTTCTACT-TACT-CTTTTTCTCAAATGATT--AAT-AGT-TC-TA--ATAT-CAGAGT-AAAAACAT-TTCGAT-GTC-ATTT-GTG-ATGGCTTG--AA-GTAA-CAAG----GAGA--TAAA--TG----------------ACT----------------------G-GGTTTTCAGATAA--TGGA-CGCT-T-A---------GGT---AAG-CCACT--CTG-T-TCGTT-A-GGA-AAATAGT-T-A-GTTCT-AGT-ACT-GCAACA---TTA-CATTTAAACCAT----T-TTATT-TCTTGTTT-CGT---TGT-TGAA---ATCGG-CAA-A--TCTTAATT---TTGGAATA-ACAGAAA-TAA-AAA----CAATAAAAG--AGAA-CAAT--------TTAAGA-----AAAGTAATTT-TA-TCAATAGAAAAAGAGAAAA-T--G-TG--AAAATTT--ATAAAACTGA-T-AA--CAATTCAA---CACAT----AATAACA-TTAATAATTT-AA-CTTCA-TGTA-GC-A-TA-TTT---GCATGT-ATT---A-CT--TGTCCATTA--GTCTTAGCTAA------------ATATG-----T-ACTTG----------T-----C-A-CT--A-CACAC-C---AAAGAT--A--TATAAGGA-TC------AGAG-CATATAAAGGTTTGA--TCG-TT--CGG--TAA-ACAGGATGTACATGAACGGAAA-CAC-AGAAT-CACTTTG-T-AATCCCA-AGTA----TATTGC-TCAAGAGTAG---AGTTTATCTACAAAATGCTTCTCAGTCCATT-CTCTATCATTCGTC--TTTCAA-----ATCAA-ATGA-C-ACGAAACATT----A------AGAAAAATAGGTG-TTTT-CAGTGAAAATA-CAGAATAAGG-TTGGAAACGAA-TATG-C--TC-C--GT---AAC-AGTAAAAAAAAAGTTCCAATGCTATTCT-GGCAATTA-ATTGCA--TTGTAGTGCATT-ACT------CTGACACAG----CTCGTGAAT-G------TA-TTATA-GA--TTCAT--AA-ATATAAA--TGT-CATA-TA--TTG--TT-AAT-TTGGCTT---TATT---TT-TTTTT---AA------------T-ATATT-TC-CGTAA-CGGGAT------TA-T--G-T-C---AT--ATGAC-AAAC---GTTTC-G-T-G-A-CACTTGC-TA---------A--A-ATC-------G--G-ACCTTTG--TGTCTTAAA-AAG---ATTGT---TAT--AA-ATTT--T-AT-TCAT-AAAGT--AG-TTA-C--AATTG---CAATT-AAAA-TTA---TT------------C--TTT--AC--ATT---ATTTT-AAATAT---CAC-A-T---C-AT--A---T---A-TACGAG-AT-AATA--------AACT----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--TAACAT-AAAC-TTC-ACAGAGGGTTT-ATTTTATAT--G-AT-A-------ACGAAGGA---AAA-TAG--TGTTCT-TG-CAG-----AAA-CTATT--C-TG-C-TG-A----TTTTT---A-GG-T-CCTATCGGACTTTT-C-A-AT-T-CC-ATTACGGA-A-TGTT-G-ACG-TAAGCG---G--------AGATT-ATTTTTAATAGACTCAAC-A-CTTTCACAA--AAATTT--TACGA-GGCAT-CCGGTGAACCATC-T----A---TCGA-ATG-CAGTAACAATCCCGTAACG
gi|5 : AGAA-TATG-C-TTT-CCTGT---AAC-AGTAAATCAAAATTTCCAATGCTATTCTCGGCCATTT-AATTGA-TTTGTAAGGCATT-ACT------CTAACACAG-A--CTCATAAAT-AC-----TATTTTCA-GACCTTCAT--AA-A-ATAAA--AGT-CATA-TA--TTGCTTTCAAA-TTTGCAG---TATT---TC-CTTTTTAAAATAAAA------CTTATCTT-TC-CGTAACCGGGAT------TA-T--G-TCC---AT--ATGAC-AAAC---GTTTC-GTT-CAA-CA-TCGCTTA---------ATCA-AC--------C--G-A-CTTTGGCTGTC-TAAACAAGCATACTG--A-AGTC-AACATTT--T-AT-TCATCCAAGA--AG-TCA-C---ATTGGCAAAATT-TAAACATA---TTCGTCTTATACTACTTTTTTGACA-ATC---ATTTACAAATAT----ACGA-TG--C-ATTAA---CCTGA-TACAAGTATCAATAAAT-----A--CAATAT-AAC---CTTGCATTTTCGTTCAATGGA-----------TA------TGC---------------GCCCA--TAAAATAAAAC-TTCAA-AGAGG--C-----TT-TATCCG-ATGAT------ATGAAGGC---AAA-TAG--TG---T-GG--AG-----AAACCTATT--CTTG-CTTG-ATTTTTTTTT---A-GG-TGCCTATCAGACTTTT-C-A-AT-T-CC-GTTACGGATC-TATT-ACACGCTTAACG---G-ATATA-TAGATT-A--TTTAATAGA-TCAAC-ACCTTTCACAA--AAAATC--TACGA-GGCATACCGCTGAA-CATCAT----G---TTGAGATG--AGTACCA----TATAACGTAATGG-TTT--ATAAAAAA---CGCTGATAAAATCTGGTGAGG-ACA--G-GCGTACC-------AACTCTAATATTT-----CTCT-----AT-AAA----TGCGCTATGAGTAAACAATAGTTCTTTATATATCAA-AT----------------ACA-------------TAT--G------------AAGA--------TACT---AAACATT--TTTGT---T-GAAA-TGC-AACC--ACAA---TTCTGATAG-AGATTAGT-A-CAA-TTAAATTTTTGTTGTCAGTTATAGTTGTCC---AA-TCA-AC-TGACTGTTAATGATATGCCCTATC--AGAAT-TAA-AAC-AAATAAT---TATTTACATA--AGT-TGTG--A-C-TA---TACGTTTAAA---GTTAGAAACCACACAC-GTTGAC--GTTGACA---TACA-T-ATGAGGGAC-ATGTGGTT--T---TTAGCG-ACAGTAGG-A---C---CATTTT-ATCT-A---CC----TAATCTAATTCCAT---T-TCTA-----TTG---GTTGGAGC-AGATTTATCA-TCGTAAGT---A-ATATT-ATTAT-CAAATAAGGA-CA-----T--ATA-----CTA-GTGTAT----GAAAAA--------CGGACTGACCG---TTGTCGTAT-T--AT---------AATGTTATAAG-------A--A---C-GCTAG-ATTG-AAA-CACAGA-ACATCAAACGATCCTAGAAT--AAACAACA--------CTGGCGAC------------AT-T-GGATTTTTTATATA-TTTTTCTCTACTACT-TTTTGGA-AAGAGTTA-TTGATT-AATGAAA-T-ACA--AT--AGATTCATCATGATAATTGTTCTACATGGTTGAG-TTTGTAGCGTTGTTGA-CTTT-GACATCA-TT-T-ATT-ACGTAG-TTGA-TACA-ATTACTTAGTT--ACGTTCAAATGAACATTCGGTCAGATGTTCAG--A--GCA-TCTCATTAATTTTCTTTTGACTAGCAA-TATG-AGATCGTTT-ATATAAAGT-AACTGATATTAGC-AGATAGAATG
gi|6 : AAAAT-----CT-ATTTT-TC--GTAAC-GGGAT------TATT--GTTCC---AT--Agtgt
gi|6 : tgatgtaattagtagtccC-AA-ATTT--T-AC-TCAT-CAAGTGAAG-TCA-CG-AATTGA-GCAATT-TAGA-ATA---TTTTCTTAGG----CCTTTT--ACA-TTTTTGATTTTGAACTATGTTCAC-A-TTTAC-AT--AAAAT---AACACAAG-ATCAATATAGATACGA--C----T-TAC---CT---GC-------------AGTCTGTCCAATTCAGATTATGC---------------G-ACAGTTACAAT-AAACCTTCAACAGAGG--CT-ATTTT-TAT-CG-ATAATGGTCATATGAAGGATATAAATTTGGTTGT--G-GGTCAGTTTATGGA-TTATTTCC-TC-C-TG-A--AATCTT------AG-TGCCTATCAGACTTTTTC-A-AT-TTCC-GTTACG---A-TAT--A-ACG-TTA-CG---G-ATATA-TAGATT-ATTTT-AATAGA-TCAAC-A-CTTTTACAACAAAATCT--TACGA-GGCAT-CCGGTGAA-CATC-TATG-A---TTGA-ATG--AGTAC--AT---ATAACGT-AT-GTTTT--AT-AAAAA---CG-TG-T---ATCTGGTGAG--ACA----G-GTACC-------GC--CTAATC-TT-----CTCT-----ATAAAA----TGCGTTATGG------------------------AACATAGTTCCTTTAAACAAGACA-------------TAT--G------------AAGA--------T-TT---AAACA-T--TTTGT---T--AAA-TGC-AACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA--TAAA-T----TTGTCA---AGAATT-TTTCCAAA-TCA-AA-TGAC-G-TAA-GA---ACCC-A-CCAGGAAT-AAA-AAC-AA--AAT---TATTTACAT---AGTGGTTG-CA-CTTATT-TA-GTGTGAATCTA-CGAGA-----GAAC-GTT-ACCTG--GA-ATTCT-TA-T-C------AC-ATG----TGGTGTGTGAGCG-AGA----GCG---CGCGCATTTT-A--C-AAGCCAACTTCAA---AATTCCA--AAT-TCTCTTTGATTG---TGGGTAGCATGTCTT-TCA-TCGT-AGTTTAA-ATATC-AT-ATTCTTA-----C-CA-----T--GTAGATTTGTA-TTATGAGTTAAAAAAA--------CA-------CGAT-TT------CTT--ATACTTATATCAAAGTT---AG-------AC-A---C-GCTAGGATTT-AAA-CACAGA-A---CATATATgttagtactcgagaatattcgtgtgtcaagcttagcgaacctaatacgcttttgtttaactaggtcagagaactctctatgtgagtgatctatataaatatgtaatgagcaaattttactcatcaagtgaagtcacgaattgagcaatttagaatattttcttaggccttttacatttttgattttgaactatgttcacatttacataaaataacacaagatcaatatagatacgacttacctgcagtctgtccaattcagattatgcgacagttacaataaaccttcaacagaggctatttttatcgataatggtcatatgaaggatataaatttggttgtgggtcagtttatggattatttcctcctgaaatcttagtgcctatcagactttttcaatttccgttacgatataacgttacggatatatagattattttaatagatcaacacttttacaacaaaatcttacgaggcatccggtgaacatctatgattgaatgagtacatataacgtatgttttataaaaacgtgtatctggtgagacaggtaccgcctaatcttctctataaaatgcgttatggaacatagttcctttaaacaagacatatgaagatttaaacattttgttaaatgcaaccacaatttctgatagagatgtatcaataaatttgtcaagaatttttccaaatcaaatgacgtaagaacccaccaggaataaaaacaaaattatttacatagtggttgcacttatttagtgtgaatctacgagagaacgttacctggaattcttatcacatgtggtgtgtgagcgagagcgcgcgcattttacaagccaacttcaaaattccaaattctctttgattgtgggtagcatgtctttcatcgtagtttaaatatcatattcttaccatgtagatttgtattatgagttaaaaaaacacgatttcttatacttatatcaaagttagacacgctaggatttaaacacagaacatatata
gi|7 : tgatgtaattagtagtccaaaatctatttttcgtaacgggattattgttccatagttagtactcgagaatattcgtgtgtcaagcttagcgaacctaatacgcttttgtttaactaggtcagagaactctctatgtgagtgatctatataaatatgtaatgag--AAAATTT--A--AAACTGACT-AA--CAATTCAA---C-CAT----a
gi|7 : -TC-T----AGAG-CATATAAAGGTTTGA--TCG-TTA-CGG--TAA-ACAGGATGTACAT-AACGGAAA-CAC-AGAATACACTTTG-T-AATCCCA-AGTAAA--TATTGC-TCAAGAGTAG---AGTTTATCTACAAAATGCTTCTCAGTCCATTTCTC-ATCAT-CGTC--TTTCAAGAT--ATCAA-ATGA-C-ACGAAACATTT---A------AGAAAAATAGGTG-TTTT-CAGTGAAAA---CAGAA-AAGG-TTGGAAA-GAA-TATG-C-TTC-C--GT---AAC-AGTAAATAAAAATTTCCAATGCTATTCT-GGCAATTA-A-TTGA-TTTGTA-TGCATT-ACT------CTGACACAG-A--CTCGTGAAT-G------TA-TTTTA-GA--Tannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctagagcatataaaggtttgatcgttacggtaaacaggatgtacataacggaaacacagaatacactttgtaatcccaagtaaatattgctcaagagtagagtttatctacaaaatgcttctcagtccatttctcatcatcgtctttcaagatatcaaatgacacgaaacatttaagaaaaataggtgttttcagtgaaaacagaaaaggttggaaagaatatgcttccgtaacagtaaataaaaatttccaatgctattctggcaattaattgatttgtatgcattactctgacacagactcgtgaatgtattttagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggactttgtgtctaaaaagatgtaatatcaaattttattcataaagtagtcacaattggcaatttaaaatattctttttacattattttaatatcacatcatatatacgagatcaataactaacctatatctgcgccataaataaacttcaacagaggttattttatcgatgaaagaaggaaaatagtgttggcagaaactattctgctgattttttaggtgcctatcggacttttcaattccattacggaatgttgacgttacggga
gi|7 : aaaatttaaaactgactaacaattcaaccatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--------G--G-A-CTTTG--TGTC-TAAA-AAG---A-TGT-AATATC-AA-ATTT--T-AT-TCAT-AAAGT--AG-TCA-C--AATTGG--CAATT-TAAA-ATA---TT------------CTTTTT--ACA--TT---ATTTTAA--TAT---CAC-A-T---C-AT--A---T---A-TACGAG-ATCAATA--------A--C----T-AAC---CT---AT-------------A-----------TC------TGC---------------G-CCA--T-AAAT-AAAC-TTCAACAGAGG--TT-A-TTT-TAT-CG-ATGA-------AAGAAGGA---AAA-TAG--TGT--T-GG-CAG-----AAA-CTATT--C-TG-C-TG-A---TTTTTT---A-GG-TGCCTATCGGACTTTT-C-A-AT-T-CC-ATTACGGA-A-TGTT-G-ACG-TT-ACG---G-nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggactttgtgtctaaaaagatgtaatatcaaattttattcataaagtagtcacaattggcaatttaaaatattctttttacattattttaatatcacatcatatatacgagatcaataactaacctatatctgcgccataaataaacttcaacagaggttattttatcgatgaaagaaggaaaatagtgttggcagaaactattctgctgattttttaggtgcctatcggacttttcaattccattacggaatgttgacgttacggga
gi|8 : aaaatttaaaactgactaacaattcaaccatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctagagcatataaaggtttgatcgttacggtaaacaggatgtacataacggaaacacagaatacactttgtaatcccaagtaaatattgctcaagagtagagtttatctacaaaatgcttctcagtccatttctcatcatcgtctttcaagatatcaaatgacacgaaacatttaagaaaaataggtgttttcagtgaaaacagaaaaggttggaaagaatatgcttccgtaacagtaaataaaaatttccaatgctattctggcaattaattgatttgtatgcattactctgacacagactcgtgaatgtattttagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATAACGTAAT-G-TTT--AT-AAAAA---CGT-G-T---ATCTGA-GAT--ACA--G-G-GTGCT-------G---CT-------------------------------TGCGTTATGG------------------------AA-AT----------------A---------------TAT--G------------AAGA--------T-TT---AAACACT--TTTGT---T-GAAA-TGC-TACC--ACAA--TTTCTGATAG-AGAT--GT-ATCAA-TTAAATT----TTGTCA---AGAATT-TGC---AA-TCA-AA-TGAC-G-TAA-GA---AACC-A-C--AGAAT-AAA-A-C-AA--AAT---TATTTACAT---AGT-TTTG-CA-C-TA---TA-GTGTGAA---A-TAAAA-----ACAC-GTG-AC--G--GA-A---T-CA-T-A------AC-ATG----T--T---TAAGCG-AGA----G-G---C---CATTTT-A--C-AC--CA----T-A---AATT-CA-TAAT-TCC------TTG---TTGGGAGC-TGGTTT-TCA-TCGTAAGT---A-ATATC-A--A--CAAA-----A-CA-----T--ATA-----ATA-TTATG-----GAAAAA--------CAG-----CCG---TT------C-T--AT---------AAAGTT---AG-------AC-A---C-GCTAG-ATTG-AAA-CACAGA-A---CAGACATTCCTA-AAT--AAACAACA--------CTGGCGAC------------AT-T-GGA-TTTTTATATATTT----TCTTC-ACT-TTC--GA-AAGAGTTA-T---TT-AA-GAAA-TAACA--ATAAAGA-T--GCCTGGAAATTG----AC-T------G-TTT-TA----TGTTTA-CGTTAAATA-CA-TC-TAATT-ACGTAG-TTGA-TACA-ATTACT---TT--ACATACAAACG--CTTTCAG---GA-ATTC----A--GCA-TCTC-TTA--TT-CTTT--ACTAGCGA-CATG-A-AT--TCT-ATATAAAGT-AACC-ATAT--AC-AGGGGGAATGga
gi|9 : CAGCCATTCT---CCCG----CAAAA--GG-GTAAA-T-gc
gi|9 : ACTGACGG------AACCT---ATT--A-ATTACCCTGTT-ACG---------GAAC-A-TAG-C-------------ATG-CT-CTA-----------AG-----GACGACGT--GGTTC--TTTAGTTTT-TGGTAGACAT-GTATTA-CAAGGG-TGAAAAA-CA-TT-GACAGTTTTAGATACGTTGT-CAAAAA-G-TTAA--A-----TAT--ATCCA-------TAG------A-nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaactgacggaacctattaattaccctgttacggaacatagcatgctctaaggacgacgtggttctttagtttttggtagacatgtattacaagggtgaaaaacattgacagttttagatacgttgtcaaaaagttaaatatatccatagatgattaaatgttttacgataaagtatgc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|25 ): GGACTTAAAATCTGTTATCTTTTATCTTTCGAGATGAATTCAATAAAGTCAATCATATGTAAAAGCAATG