lowQualScore : 1 1111111111 2222222222 111111 222222222 111111111 1 1 444444444444 11111 11 1 111 1 11 111 11 1
lowQualScore : 4 4 0 99 4 4 55 7777 3 3 3 888 7777777777 4 3333333333 4 4 111111 1 2 555555555 2 00 5 777 4 1 99 777777777 1 0 1 6 66 88 6 0 666666666666 5 44 777 3 99 8 8 88888 5 3 3 33 0 3 777 0 11 777 99 2 77 3 2 0
lowQualScore : . . . .. . . .. .... . . . ... .......... . .......... . . ...... . . ......... . .. . ... . . .. ......... . . . . .. .. . . ............ . .. ... . .. . . ..... . . . .. . . ... . .. ... .. . .. . . .
lowQualScore : 0 0 9 55 1 1 55 7777 6 6 5 111 5555555555 0 0000000000 0 0 555555 6 2 111111111 0 66 0 777 4 9 00 777777777 8 7 9 6 11 88 2 8 999999999999 7 44 555 2 22 0 0 88888 6 2 2 88 0 2 555 0 22 555 88 5 22 2 5 0
consensus : NTGAA-TGAA-TTTATTGACAGCACCATT--ATACATAGGCATATAGTCAT--AAATAC----AA-CA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACTATG------TTGTTAATATGAA--GA-CACATCTAAGTTAATCAATTTTCAA-CTT---T---CTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AAAGT-CTTCTAGCTGTTTTTACATTTG--ATGGGTTC-ATAACAGATTTT---AAAGG-ACT-ATCTC---TCAT-ATAACATTCTACATTAAATATGTCACTG-TATTGTA
Reference ( gi|5 ) : TTGAA-TGAA-TTTATTGACAGCACCATT--ATACCTAGGCATATAGTCAT--AAATAC----AA-CA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACTCTG------TTGTTAATATGTA--GA-TACATCTATGTTAATCAATTTTCA----T---T---CTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AACGT-CTTCTAGCTGTTTTTACATTTG--ATGGATTC-ATAACAGATTTT---AAAGG-ATT-ATCTC---TCAT-ATAACATTCTATATTAAATATGTCACTG-TATTGTAC
gi|4 : TGAA-TGAA-TTTATTGACATCACCATT--ATACATAGACATATAGTCAT--AAATAC----AA-CA-AATCGGTGAT----------TA-C----------ACAA-TA-AA------AATAATGAGGGAC----------------TCAC--TGTCA-GTT-G-TTA-AATAC-AACTATG------TTGTTACTATGAA--GA-CACATCTAAATTAATCAATTTTCAAACTT---T---CTTT-TCTAAATTCATAACTGTT-------------TA-C-AAAGT-CTTCTAGCTGTTTTTACATTTG--CTGGGTTC-ATAACAGATTTT---AAAGG-TTT-ATCTC---TCAA-ATAACATTCTTCATTAAGTATGTCACTG-TATTGTA
gi|7 : TGAA-TGAA-TT-ATTGACAACACCATT--ATA------------GTCATGAAAATACTAACAA-CA-AATCAGTAATAAGTCACGAATAAC----------ATAA-TA-CATGTACAAAGAATGAGAGACACAA---TAATGGATTAGACATAGTCA-GTT----TA-A-TAA-AATTCTA------TTGTTAATATAAA--CA-CACATCTAAGTTAATGAATTTTCAAATTT---T---CTTT-TCTAGATTTATAAA-GTTCTT--TAAATT--TA-C-AAAGT-CTTCTATCT--TTTTACATTTG--ATGGATTC-ATAACAG-TCTT---AAAGG-ACT-GTCTC---TCGT-ATAACATTCTGCATTAAATATGTCACTG-atctataatgatcataacaagaacaatataacacaaaatgttccttcattttcaataaactatttacatgaatagcatacacgttt
gi|6 : TGAA-AGAA-TTTATTGACAGAACCAT---ATACATAG-CATATAGTCAA--AAATAC----AAACA-AATCA-TA------------TA-C----------ACAA-TA-CA------A-GAATGAAGG---CAG-----------------ATGTCACGTT-G-TTA-A-TA--AACTTTGCGATTGTTGTTAATATGAAAAGA-CACATCTATGTTAATCAAATTTAA----C---TTATCTTT-TCTAAATT-ATATCTGGTCTTAAGGAATTAATA-CGAAAGTACTTCTAGCTGTTTTTACATT-G--ATGGATTCCATAGCATATTTTTTAAGATG-ATTTATCTT---TCATTATAA-ATTATACATTTAATATGTCACTG-TATTGTA
gi|11 : aTGAA-TGAA-TTTATTGACAGCACCATT--ATACCTAGGCATATAGTCAT--A--TAC----A--------------T----------TG-C----------ACAA-TA-CA------AAGAATGAGGGACACTA---T---TGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACTCTG------TTGTTAATATGAA--GA-CACATCTAAGTTAATCAATTTTCA----atc
gi|14 : aTGAA-TGAA-TTTATTGACAGCACCATTTAATACATGGGCATATAGTCAT--AAATAC----AA-CA-AGTCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACaactt
gi|1 : aTGAA-TGAA-T--ATTTACGACACCATT--ATAA-TATGCATATAGTCAT--AATAAC----AA-CA-A-TCAG--AT----------TA-C----------ACAAATA-CA------AAAAA-----GATACAA-------GGATT-GACAATTTCA---T-G-TTA-AATACCAACT--------------AA-----A--GA-CACATCTA-GT-AATAAATTTTCA----TCTTT---CTTTATCTAAATTCATAACT-TTCTTATAAA--T--TA-C-AAAGT--TTCTAGCTG-TTTTAC-TTTGAAATGGGTTC-ATAACAGATTTT---AAAGATACT-TTTTCTTTTCA--ATAACATTCTACA--AAATATGTCA-TGTTATTGTA
gi|10 : aTGAA-TGAC-TTTATTGACAGCACCATTT-ATACATAGGCATATAGTCAT--AAATAC----AA-CA-A--CAAT-AT----------TA-AGA--------ACAA-TAACA------AA--AT----------A---T---GGATTTGACAATGTCA-GTT-GTTTA-AATA--AAC---------------AA-----A--GACCACATCTAGGTTAATAAATTTTCAATC-T---T---CTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--atctaaatatataaatgcaatataacacaaaatgttcttcaatttcaataaattgtacatgaatagcagaactttgtctctaggtaaggaggtcttggagtatctcccgtaaaacaaatgaagtgcagacattattcgtaaggaatcaagataatatttctgattcttaacgacattcaataattctttatatcatctagactaactatatctataaacatgttaatcttccgatattattattatcatatttttccaggtatacaaaatttgctaggtagtgtttctctaaatttatttacggatttatgtggaatcaaaaattaaagaaattttgtgtaatgtattagtttttgccaagatactctagccccaaagtatcttcctttaaaatgctgatacaattcaaaaataatataatcatttttattctaaatctttaatctttaaaagaaatttaaacatattttcataacactaaaaacaacaagaaattgccccaacccatatccacacaatatagatatatatagcaacacaatatatcttaaatatctgtttaattttccaa
gi|16 : aGAACTGAAGTTTATTGACAGCACCATT--A-ACCTAGCGATATA-TC-T--AAATAC----AA-CA-AAT--GTGAT----------TA-C----------AC-A-TC-C--------AGAATGAGGAACGCAA---T----CATTTGA
gi|18 : GAA-TGAA-TTTATTGA---CATCATT---CAC--AGGCATACCGTGAT--AACTAC----AG-CACAAT
gi|12 : gA-TGAA-TTAATTGACGACACCACT--ACACTTTCTCAAATAATCAT--AAATAC----AA-CA-AACCA-TTAT----------CA-C----------ACAA-TA-CA------AATGAGGAGGGACACAATATT---AAATTTGGCATAGTCA-GTTAA-TTATAAT----ATTATG------TTGCT-ATATGAA--CA-CACATCTAAGGTAAT
gi|19 : ----AA-TA-AATCAGTGAT----------TA-CTGTCATTTACACAA-TA-CA------AAGAATGAGGGACACAA---
gi|17 : -TTA-AATAC-AACTATG------TTGTTACTATGAA--GA-TACATCT-------TCAACCT-------T---T---CTTT-TCTAAATTCATAACTGTT
gi|13 : AC-AACTATG------T----AATATAAA--GA-CACATCCAATTCAATCAATTTTAAAACTT---C---CCTT-TCTAATTTCATAACC-TTCTTAAGAAATT--TACC-AAAG----TCTAGCTGTTTt
5 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|2 ): GTAATCTATAATGATCATAACAAGGACAATATTATACAAAATGTTCTTCATGAATAGCATGTACACGTTTGTCTCTGGGTACTGGAGGTCTTGAGTATCTTTTCTGTTTCAATATGAAGGGTATGTGCACTTATTCGTAATTTGGTCAAAATATATCTTTCTGATTTCAAGTAATTCTGTAGTTTATATTCATTTACACTATCTATAGTGCCATAAAATGTTAATTTTCCGATATCATTATTGGATATATTTTTCAGTTGATCAAAAATGTTGCTCTAGTGTAGTGTTTCTCTAATTCATTTATCAGAGTTTTATGTGGAATATTCAAAGAAATTAAGGATAACTTTTGTTGTAATGCAAGAAGTTTTTGTGTCAAGATACTATAGCTCCAAGTGTATTATCTTCTTTTAATGCTGATACAACCAAATCATAATTATTTTTGGATTATAAATCTTCTAATCTTTTACAGAATTT
Unaligned ( gi|3 ): CCTGTTTCAATATGAAGTGCATGAGCACTTATTCGTAATTTGGTCAAAATAGATCTTTCTGATTTCTTTAACATTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAATATACTGCTATAAGATGTTAATTTTGCGATATCATTATTTTATTTATTTTTCAATTGATCAACAATTTTACTAGTGTAGTGTTTCTCTAATTTATTTTTCAGAGTGTTATATGTGGCATATCCAAAGAATTTAAAAATAAGTTTTGTTGTAGTGTGCGACGTTTTTTGTGCCAAGATACTCTAGCCCTAAGTATATTGTCTTCTTTAAATGCTGATACCATCAAATTATAATTATAATAATTTTTTGATTCTTTTAAAGAATTTA
Unaligned ( gi|8 ): TGCATCAAGCGAAAAGGGACCTTTGTGACGAAGGAAATTCACCTTTTCAGTTTTTCTTAAAGAGCAAGTCCTCCTGATTGTTTTTATGTGAATGATTACCTGTATTTCAATAAATAATTGCACAAAAAACCTTCCCAAAATAAGTTGATAATTCTGCATTTTGACGTCATTAGCGTAACGTCGAAACAGCGTAACGTGATTTCAGTAAAAT
Unaligned ( gi|9 ): TATTGTCTTCTTTAAATGCTGATATAGCCAAATTATAATTATAATCAATTTTGGATTCTAAATCTTTTAATCTTTTAAAGAATTTAAACATTTATACAAGAACAAGGGAAATTGCCCCAACTCATATCGAACAGCAATATTAGATGGTTTATTATGAACACCAAGTATATCCTTAAATATTTGGTTTTGAGTTTTTTCAAA
Unaligned ( gi|15 ): AAGAACAAGGGAAATTGTCCTAACTCGTATAGAACAGCAATACATATAAGATTATTTATTATGAACACCAAGTATATCCTTATCTGGTTTTGAGTTTTTTCAAAG
Alignments
lowQualScore : 1111 1111111111 2222222222 111111 11111111 1111111 11 11 111 111 111 11
lowQualScore : 3 3 88 2 1 55 0000 3 2 444 5555555555 3 0000000000 3 3 000000 0 88888888 0 4 555 4 77 4444444 0 11 55 4 33 55 55 4 5 2 33 1 77 6 6 99 3 11 11 8 0 444 222 444 44 0 8
lowQualScore : . . .. . . .. .... . . ... .......... . .......... . . ...... . ........ . . ... . .. ....... . .. .. . .. .. .. . . . .. . .. . . .. . .. .. . . ... ... ... .. . .
lowQualScore : 6 6 66 1 4 00 4444 3 4 777 9999999999 6 9999999999 6 6 555555 5 22222222 9 4 888 0 33 6666666 7 33 55 0 22 66 33 4 0 5 00 4 99 7 7 22 2 66 00 0 8 000 222 000 00 8 0
consensus : NTGAA-TGAA-TTTATTGACAGCACCATT--ATACATAGGCATATAGTCAT--AAATAC----AACA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----A-TGTTGTTAATATG--AAGA-CACATCTAAGTTAATCAATTTTC-AA-CTT-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AAAGT-CTTCTAGCTGTTTTTACATTTG--ATGGATT-CATAACAGATTTT---AAAGG-A-TTATCTC---TCA-TATAACATTCTACATTAAATATGTCACTG-TATTGTA
Reference ( family-10496 ) : NTGAA-TGAA-TTTATTGACAGCACCATT--ATACATAGGCATATAGTCAT--AAATAC----AACA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----A-TGTTGTTAATATG--AAGA-CACATCTAAGTTAATCAATTTTC-AA-CTT-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AAAGT-CTTCTAGCTGTTTTTACATTTG--ATGGGTT-CATAACAGATTTT---AAAGG-A-CTATCTC---TCA-TATAACATTCTACATTAAATATGTCACTG-TATTGTA
gi|1 : TGAA-TGAA-T--ATTTACGACACCATT--ATA-ATATGCATATAGTCAT--AATAAC----AACA-A-TCAG--AT----------TA-C----------ACAAATA-CA------AAAAA-----GATACAA-------GGATT-GACAATTTCA---T-G-TTA-AATACCAACT-----A----------------AAGA-CACATCTAG--TAATAAATTTTC-AT-CTT-TCTTTATCTAAATTCATAACT-TTCTTATAAA--T--TA-C-AAAGT--TTCTAGCTG-TTTTAC-TTTGAAATGGGTT-CATAACAGATTTT---AAAGATA-CTTTTTCTTTTCA--ATAACATTCTACA--AAATATGTCA-TGTTATTGTA
gi|10 : aTGAA-TGAC-TTTATTGACAGCACCATTT-ATACATAGGCATATAGTCAT--AAATAC----AACA-A--CAAT-AT----------TA-AGA--------ACAA-TAACA------AA--AT----------A---T---GGATTTGACAATGTCA-GTT-GTTTA-AATA--AAC--------------------A--AAGACCACATCTAGGTTAATAAATTTTC-AA-TCT-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--atctaaatatataaatgcaatataacacaaaatgttcttcaatttcaataaattgtacatgaatagcagaactttgtctctaggtaaggaggtcttggagtatctcccgtaaaacaaatgaagtgcagacattattcgtaaggaatcaagataatatttctgattcttaacgacattcaataattctttatatcatctagactaactatatctataaacatgttaatcttccgatattattattatcatatttttccaggtatacaaaatttgctaggtagtgtttctctaaatttatttacggatttatgtggaatcaaaaattaaagaaattttgtgtaatgtattagtttttgccaagatactctagccccaaagtatcttcctttaaaatgctgatacaattcaaaaataatataatcatttttattctaaatctttaatctttaaaagaaatttaaacatattttcataacactaaaaacaacaagaaattgccccaacccatatccacacaatatagatatatatagcaacacaatatatcttaaatatctgtttaattttccaa
gi|11 : aTGAA-TGAA-TTTATTGACAGCACCATT--ATACCTAGGCATATAGTCAT--A--TAC----A-------------T----------TG-C----------ACAA-TA-CA------AAGAATGAGGGACACTA---T---TGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----C-TGTTGTTAATATG--AAGA-CACATCTAAGTTAATCAATTTTCAAA-CTT-
gi|12 : aA-TGAA-TTAATTGACGACACCACT--ACACTTTCTCAAATAATCAT--AAATAC----AACA-AACCA-TTAT----------CA-C----------ACAA-TA-CA------AATGAGGAGGGACACAATATT---AAATTTGGCATAGTCA-GTTAA-TTATAAT----ATT-----A-TGTTGCT-ATATG--AACA-CACATCTAAGGTAAT
gi|13 : AC-AACT-----A-TGT----AATATA--AAGA-CACATCCAATTCAATCAATTTTA-AAACTT-CCCTT-TCTAATTTCATAACC-TTCTTAAGAAATT--TACC-AAAG----TCTAGCTGTTT
gi|14 : TGAA-TGAA-TTTATTGACAGCACCATTTAATACATGGGCATATAGTCAT--AAATAC----AACA-AGTCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACaaatcttggtaaagcatcatctggcttaacgccgtcatctc
gi|16 : aGAACTGAAGTTTATTGACAGCACCATT--A-ACCTAGCGATATA-TC-T--AAATAC----AACA-AAT--GTGAT----------TA-C----------AC-A-TC-C--------AGAATGAGGAACGCAA---T----CATTTGA
gi|17 : -TTA-AATAC-AACT-----A-TGTTGTTACTATG--AAGA-TACATCT-------TCAAC--------CTT-TCTTT-TCTAAATTCATAACTGTT
gi|18 : GAA-TGAA-TTTATTGA---CATCATT-----CACAGGCATACCGTGAT--AACTAC----AGCACAATt
gi|19 : g----AATA-AATCAGTGAT----------TA-CTGTCATTTACACAA-TA-CA------AAGAATGAGGGACACAA---
gi|4 : TGAA-TGAA-TTTATTGACATCACCATT--ATACATAGACATATAGTCAT--AAATAC----AACA-AATCGGTGAT----------TA-C----------ACAA-TA-AA------AATAATGAGGGAC----------------TCAC--TGTCA-GTT-G-TTA-AATAC-AACT-----A-TGTTGTTACTATG--AAGA-CACATCTAAATTAATCAATTTTC-AAACTT-TCTTT-TCTAAATTCATAACTGTT-------------TA-C-AAAGT-CTTCTAGCTGTTTTTACATTTG--CTGGGTT-CATAACAGATTTT---AAAGG-T-TTATCTC---TCA-AATAACATTCTTCATTAAGTATGTCACTG-TATTGTA
gi|5 : TGAA-TGAA-TTTATTGACAGCACCATT--ATACCTAGGCATATAGTCAT--AAATAC----AACA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----C-TGTTGTTAATATG--TAGA-TACATCTATGTTAATCAATTTTC-A----T-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AACGT-CTTCTAGCTGTTTTTACATTTG--ATGGATT-CATAACAGATTTT---AAAGG-A-TTATCTC---TCA-TATAACATTCTATATTAAATATGTCACTG-TATTGTAatctataatgatcataacaagaacaatataacacaaaatgttccttcattttcaataaactatttacatgaatagcatacacgttt
gi|6 : tTGAA-AGAA-TTTATTGACAGAACCA-T--ATACATA-GCATATAGTCAA--AAATACA---AACA-AATCA-TA------------TA-C----------ACAA-TA-C-------AAGAATGAAGG-CA-------------------GATGTCACGTT-G-TT--AATA--AACTTTGCGATTGTTGTTAATATGAAAAGA-CACATCTATGTTAATCAAATTT--AA-CTTATCTTT-TCTAAATT-ATATCTGGTCTTAAGGAATTAATA-CGAAAGTACTTCTAGCTGTTTTTACA-TTG--ATGGATTCCATAGCATATTTTTTAAGATG-ATTTATCTT---TCATTATAA-ATTATACATTTAATATGTCACTG-TATTGTAc
gi|7 : aTGAA-TGAA-TT-ATTGACAACACCATT--ATA------------GTCATGAAAATACTAACAACA-AATCAGTAATAAGTCACGAATAAC----------ATAA-TA-CATGTACAAAGAATGAGAGACACAA---TAATGGATTAGACATAGTCA-GTT----TA-A-TAA-AATT-----C-TATTGTTAATATA--AACA-CACATCTAAGTTAATGAATTTTC-AAATTT-TCTTT-TCTAGATTTATAAA-GTTCTT--TAAATT--TA-C-AAAGT-CTTCTATCT--TTTTACATTTG--ATGGATT-CATAACAG-TCTT---AAAGG-A-CTGTCTC---TCG-TATAACATTCTGCATTAAATATGTCACTG-atc
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|2 ): GTAATCTATAATGATCATAACAAGGACAATATTATACAAAATGTTCTTCATGAATAGCATGTACACGTTTGTCTCTGGGTACTGGAGGTCTTGAGTATCTTTTCTGTTTCAATATGAAGGGTATGTGCACTTATTCGTAATTTGGTCAAAATATATCTTTCTGATTTCAAGTAATTCTGTAGTTTATATTCATTTACACTATCTATAGTGCCATAAAATGTTAATTTTCCGATATCATTATTGGATATATTTTTCAGTTGATCAAAAATGTTGCTCTAGTGTAGTGTTTCTCTAATTCATTTATCAGAGTTTTATGTGGAATATTCAAAGAAATTAAGGATAACTTTTGTTGTAATGCAAGAAGTTTTTGTGTCAAGATACTATAGCTCCAAGTGTATTATCTTCTTTTAATGCTGATACAACCAAATCATAATTATTTTTGGATTATAAATCTTCTAATCTTTTACAGAATTT
Unaligned ( gi|3 ): CCTGTTTCAATATGAAGTGCATGAGCACTTATTCGTAATTTGGTCAAAATAGATCTTTCTGATTTCTTTAACATTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAATATACTGCTATAAGATGTTAATTTTGCGATATCATTATTTTATTTATTTTTCAATTGATCAACAATTTTACTAGTGTAGTGTTTCTCTAATTTATTTTTCAGAGTGTTATATGTGGCATATCCAAAGAATTTAAAAATAAGTTTTGTTGTAGTGTGCGACGTTTTTTGTGCCAAGATACTCTAGCCCTAAGTATATTGTCTTCTTTAAATGCTGATACCATCAAATTATAATTATAATAATTTTTTGATTCTTTTAAAGAATTTA
Unaligned ( gi|8 ): TGCATCAAGCGAAAAGGGACCTTTGTGACGAAGGAAATTCACCTTTTCAGTTTTTCTTAAAGAGCAAGTCCTCCTGATTGTTTTTATGTGAATGATTACCTGTATTTCAATAAATAATTGCACAAAAAACCTTCCCAAAATAAGTTGATAATTCTGCATTTTGACGTCATTAGCGTAACGTCGAAACAGCGTAACGTGATTTCAGTAAAAT
Unaligned ( gi|9 ): TATTGTCTTCTTTAAATGCTGATATAGCCAAATTATAATTATAATCAATTTTGGATTCTAAATCTTTTAATCTTTTAAAGAATTTAAACATTTATACAAGAACAAGGGAAATTGCCCCAACTCATATCGAACAGCAATATTAGATGGTTTATTATGAACACCAAGTATATCCTTAAATATTTGGTTTTGAGTTTTTTCAAA
Unaligned ( gi|15 ): AAGAACAAGGGAAATTGTCCTAACTCGTATAGAACAGCAATACATATAAGATTATTTATTATGAACACCAAGTATATCCTTATCTGGTTTTGAGTTTTTTCAAAG
Alignments
lowQualScore : 1111 1111111111 2222222222 111111 11111111 1111111 11 11 111 111 111 11
lowQualScore : 3 3 88 2 1 55 0000 3 2 444 5555555555 3 0000000000 3 3 000000 0 88888888 0 4 555 4 77 4444444 0 11 55 4 33 55 55 4 5 2 33 1 77 6 6 99 3 11 11 8 0 444 222 444 44 0 8
lowQualScore : . . .. . . .. .... . . ... .......... . .......... . . ...... . ........ . . ... . .. ....... . .. .. . .. .. .. . . . .. . .. . . .. . .. .. . . ... ... ... .. . .
lowQualScore : 6 6 66 1 4 00 4444 3 4 777 9999999999 6 9999999999 6 6 555555 5 22222222 9 4 888 0 33 6666666 7 33 55 0 22 66 33 4 0 5 00 4 99 7 7 22 2 66 00 0 8 000 222 000 00 8 0
consensus : NTGAA-TGAA-TTTATTGACAGCACCATT--ATACATAGGCATATAGTCAT--AAATAC----AACA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----A-TGTTGTTAATATG--AAGA-CACATCTAAGTTAATCAATTTTC-AA-CTT-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AAAGT-CTTCTAGCTGTTTTTACATTTG--ATGGATT-CATAACAGATTTT---AAAGG-A-TTATCTC---TCA-TATAACATTCTACATTAAATATGTCACTG-TATTGTA
Reference ( family-10496 ) : NTGAA-TGAA-TTTATTGACAGCACCATT--ATACATAGGCATATAGTCAT--AAATAC----AACA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----A-TGTTGTTAATATG--AAGA-CACATCTAAGTTAATCAATTTTC-AA-CTT-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AAAGT-CTTCTAGCTGTTTTTACATTTG--ATGGATT-CATAACAGATTTT---AAAGG-A-TTATCTC---TCA-TATAACATTCTACATTAAATATGTCACTG-TATTGTA
gi|1 : TGAA-TGAA-T--ATTTACGACACCATT--ATA-ATATGCATATAGTCAT--AATAAC----AACA-A-TCAG--AT----------TA-C----------ACAAATA-CA------AAAAA-----GATACAA-------GGATT-GACAATTTCA---T-G-TTA-AATACCAACT-----A----------------AAGA-CACATCTAG--TAATAAATTTTC-AT-CTT-TCTTTATCTAAATTCATAACT-TTCTTATAAA--T--TA-C-AAAGT--TTCTAGCTG-TTTTAC-TTTGAAATGGGTT-CATAACAGATTTT---AAAGATA-CTTTTTCTTTTCA--ATAACATTCTACA--AAATATGTCA-TGTTATTGTA
gi|10 : aTGAA-TGAC-TTTATTGACAGCACCATTT-ATACATAGGCATATAGTCAT--AAATAC----AACA-A--CAAT-AT----------TA-AGA--------ACAA-TAACA------AA--AT----------A---T---GGATTTGACAATGTCA-GTT-GTTTA-AATA--AAC--------------------A--AAGACCACATCTAGGTTAATAAATTTTC-AA-TCT-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--atctaaatatataaatgcaatataacacaaaatgttcttcaatttcaataaattgtacatgaatagcagaactttgtctctaggtaaggaggtcttggagtatctcccgtaaaacaaatgaagtgcagacattattcgtaaggaatcaagataatatttctgattcttaacgacattcaataattctttatatcatctagactaactatatctataaacatgttaatcttccgatattattattatcatatttttccaggtatacaaaatttgctaggtagtgtttctctaaatttatttacggatttatgtggaatcaaaaattaaagaaattttgtgtaatgtattagtttttgccaagatactctagccccaaagtatcttcctttaaaatgctgatacaattcaaaaataatataatcatttttattctaaatctttaatctttaaaagaaatttaaacatattttcataacactaaaaacaacaagaaattgccccaacccatatccacacaatatagatatatatagcaacacaatatatcttaaatatctgtttaattttccaa
gi|11 : aTGAA-TGAA-TTTATTGACAGCACCATT--ATACCTAGGCATATAGTCAT--A--TAC----A-------------T----------TG-C----------ACAA-TA-CA------AAGAATGAGGGACACTA---T---TGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----C-TGTTGTTAATATG--AAGA-CACATCTAAGTTAATCAATTTTCAAA-CTT-
gi|12 : aA-TGAA-TTAATTGACGACACCACT--ACACTTTCTCAAATAATCAT--AAATAC----AACA-AACCA-TTAT----------CA-C----------ACAA-TA-CA------AATGAGGAGGGACACAATATT---AAATTTGGCATAGTCA-GTTAA-TTATAAT----ATT-----A-TGTTGCT-ATATG--AACA-CACATCTAAGGTAAT
gi|13 : AC-AACT-----A-TGT----AATATA--AAGA-CACATCCAATTCAATCAATTTTA-AAACTT-CCCTT-TCTAATTTCATAACC-TTCTTAAGAAATT--TACC-AAAG----TCTAGCTGTTT
gi|14 : TGAA-TGAA-TTTATTGACAGCACCATTTAATACATGGGCATATAGTCAT--AAATAC----AACA-AGTCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACaaatcttggtaaagcatcatctggcttaacgccgtcatctc
gi|16 : aGAACTGAAGTTTATTGACAGCACCATT--A-ACCTAGCGATATA-TC-T--AAATAC----AACA-AAT--GTGAT----------TA-C----------AC-A-TC-C--------AGAATGAGGAACGCAA---T----CATTTGA
gi|17 : -TTA-AATAC-AACT-----A-TGTTGTTACTATG--AAGA-TACATCT-------TCAAC--------CTT-TCTTT-TCTAAATTCATAACTGTT
gi|18 : GAA-TGAA-TTTATTGA---CATCATT-----CACAGGCATACCGTGAT--AACTAC----AGCACAATt
gi|19 : g----AATA-AATCAGTGAT----------TA-CTGTCATTTACACAA-TA-CA------AAGAATGAGGGACACAA---
gi|4 : TGAA-TGAA-TTTATTGACATCACCATT--ATACATAGACATATAGTCAT--AAATAC----AACA-AATCGGTGAT----------TA-C----------ACAA-TA-AA------AATAATGAGGGAC----------------TCAC--TGTCA-GTT-G-TTA-AATAC-AACT-----A-TGTTGTTACTATG--AAGA-CACATCTAAATTAATCAATTTTC-AAACTT-TCTTT-TCTAAATTCATAACTGTT-------------TA-C-AAAGT-CTTCTAGCTGTTTTTACATTTG--CTGGGTT-CATAACAGATTTT---AAAGG-T-TTATCTC---TCA-AATAACATTCTTCATTAAGTATGTCACTG-TATTGTA
gi|5 : TGAA-TGAA-TTTATTGACAGCACCATT--ATACCTAGGCATATAGTCAT--AAATAC----AACA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----C-TGTTGTTAATATG--TAGA-TACATCTATGTTAATCAATTTTC-A----T-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AACGT-CTTCTAGCTGTTTTTACATTTG--ATGGATT-CATAACAGATTTT---AAAGG-A-TTATCTC---TCA-TATAACATTCTATATTAAATATGTCACTG-TATTGTAatctataatgatcataacaagaacaatataacacaaaatgttccttcattttcaataaactatttacatgaatagcatacacgttt
gi|6 : tTGAA-AGAA-TTTATTGACAGAACCA-T--ATACATA-GCATATAGTCAA--AAATACA---AACA-AATCA-TA------------TA-C----------ACAA-TA-C-------AAGAATGAAGG-CA-------------------GATGTCACGTT-G-TT--AATA--AACTTTGCGATTGTTGTTAATATGAAAAGA-CACATCTATGTTAATCAAATTT--AA-CTTATCTTT-TCTAAATT-ATATCTGGTCTTAAGGAATTAATA-CGAAAGTACTTCTAGCTGTTTTTACA-TTG--ATGGATTCCATAGCATATTTTTTAAGATG-ATTTATCTT---TCATTATAA-ATTATACATTTAATATGTCACTG-TATTGTAc
gi|7 : aTGAA-TGAA-TT-ATTGACAACACCATT--ATA------------GTCATGAAAATACTAACAACA-AATCAGTAATAAGTCACGAATAAC----------ATAA-TA-CATGTACAAAGAATGAGAGACACAA---TAATGGATTAGACATAGTCA-GTT----TA-A-TAA-AATT-----C-TATTGTTAATATA--AACA-CACATCTAAGTTAATGAATTTTC-AAATTT-TCTTT-TCTAGATTTATAAA-GTTCTT--TAAATT--TA-C-AAAGT-CTTCTATCT--TTTTACATTTG--ATGGATT-CATAACAG-TCTT---AAAGG-A-CTGTCTC---TCG-TATAACATTCTGCATTAAATATGTCACTG-atc
blockSeqs : C G TA A G GA TAAC C A GTG AAGTCACGAA A TGTCATTTAC . A TGTACA TATTA C GT T C TTGCGAT AA AA C GG CA AA A . G AA A AA C G AC T AT . C TTA AT . TT .
blockSeqs : . . T C G . A . G GTG . . GA . . . TAATG . AA . C C AA . . AG C AA . . G AA A . . . C T AT . . . T . A .
blockSeqs : . . . T C . . . A GTG . . . . . . TG . G . C A AC . . AG A AA . . G AA A . . . C T AT . . . A . T .
blockSeqs : . . . A G . . . A GTG . . . . . . TT . G . C A AC . . AT C A . . G AA A . . . C T A . . . A . T .
blockSeqs : . . . C G . . . A GTG . . . . . . TG . G . C A AA . . AA C A . . G . A . . . . .
blockSeqs : . . . A G . . . A GTA . . . . . . TG . G . C A AA . . TG C A . . G . . .
blockSeqs : . . . A G . . . A AT . . . . . . T . G . A C AA . . TG . . . . .
blockSeqs : . . . C G . . . A TT . . . . . . . . . . . C A . . AG . . .
blockSeqs : . . . A . . . . A TA . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . .
blockSeqs : . . .
blockSeqCons : GTG TG****** C* AA AG A* C* AT ** A** *** T*
originalCons : NTGAA-TGAA-TTTATTGACAGCACCATT--ATACATAGGCATATAGTCAT--AAATAC----AACA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----A-TGTTGTTAATATG--AAGA-CACATCTAAGTTAATCAATTTTC-AA-CTT-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AAAGT-CTTCTAGCTGTTTTTACATTTG--ATGGATT-CATAACAGATTTT---AAAGG-A-TTATCTC---TCA-TATAACATTCTACATTAAATATGTCACTG-TATTGTA
finalCons : NTGAA-TGAA-TTTATTGACAGCACCATT--ATACATAGGCATATAGTCAT--AAATAC----AACA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAATG------GATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----A-TGTTGTTAATATG--AAGA-CACATCTAAGTTAATCAATTTTC-AA-CTT-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AAAGTC-TTCTAGCTGTTTTTACATTTG--ATGGATT-CATAACAGATTTT---AAAGGA--TTATCTC---TCAT-ATAACATTCTACATTAAATATGTCACTG-TATTGTA
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|2 ): GTAATCTATAATGATCATAACAAGGACAATATTATACAAAATGTTCTTCATGAATAGCATGTACACGTTTGTCTCTGGGTACTGGAGGTCTTGAGTATCTTTTCTGTTTCAATATGAAGGGTATGTGCACTTATTCGTAATTTGGTCAAAATATATCTTTCTGATTTCAAGTAATTCTGTAGTTTATATTCATTTACACTATCTATAGTGCCATAAAATGTTAATTTTCCGATATCATTATTGGATATATTTTTCAGTTGATCAAAAATGTTGCTCTAGTGTAGTGTTTCTCTAATTCATTTATCAGAGTTTTATGTGGAATATTCAAAGAAATTAAGGATAACTTTTGTTGTAATGCAAGAAGTTTTTGTGTCAAGATACTATAGCTCCAAGTGTATTATCTTCTTTTAATGCTGATACAACCAAATCATAATTATTTTTGGATTATAAATCTTCTAATCTTTTACAGAATTT
Unaligned ( gi|3 ): CCTGTTTCAATATGAAGTGCATGAGCACTTATTCGTAATTTGGTCAAAATAGATCTTTCTGATTTCTTTAACATTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAATATACTGCTATAAGATGTTAATTTTGCGATATCATTATTTTATTTATTTTTCAATTGATCAACAATTTTACTAGTGTAGTGTTTCTCTAATTTATTTTTCAGAGTGTTATATGTGGCATATCCAAAGAATTTAAAAATAAGTTTTGTTGTAGTGTGCGACGTTTTTTGTGCCAAGATACTCTAGCCCTAAGTATATTGTCTTCTTTAAATGCTGATACCATCAAATTATAATTATAATAATTTTTTGATTCTTTTAAAGAATTTA
Unaligned ( gi|8 ): TGCATCAAGCGAAAAGGGACCTTTGTGACGAAGGAAATTCACCTTTTCAGTTTTTCTTAAAGAGCAAGTCCTCCTGATTGTTTTTATGTGAATGATTACCTGTATTTCAATAAATAATTGCACAAAAAACCTTCCCAAAATAAGTTGATAATTCTGCATTTTGACGTCATTAGCGTAACGTCGAAACAGCGTAACGTGATTTCAGTAAAAT
Unaligned ( gi|9 ): TATTGTCTTCTTTAAATGCTGATATAGCCAAATTATAATTATAATCAATTTTGGATTCTAAATCTTTTAATCTTTTAAAGAATTTAAACATTTATACAAGAACAAGGGAAATTGCCCCAACTCATATCGAACAGCAATATTAGATGGTTTATTATGAACACCAAGTATATCCTTAAATATTTGGTTTTGAGTTTTTTCAAA
Unaligned ( gi|15 ): AAGAACAAGGGAAATTGTCCTAACTCGTATAGAACAGCAATACATATAAGATTATTTATTATGAACACCAAGTATATCCTTATCTGGTTTTGAGTTTTTTCAAAG
Alignments
lowQualScore : 1111 1111111111 2222222222 111111 11111111 1111111 11 11 111 111 111 11
lowQualScore : 3 3 88 2 1 55 0000 3 2 444 5555555555 3 0000000000 3 3 000000 0 88888888 0 4 555 4 77 4444444 0 11 55 4 33 55 55 4 5 2 33 1 77 6 6 99 3 11 11 8 0 444 222 444 44 0 8
lowQualScore : . . .. . . .. .... . . ... .......... . .......... . . ...... . ........ . . ... . .. ....... . .. .. . .. .. .. . . . .. . .. . . .. . .. .. . . ... ... ... .. . .
lowQualScore : 6 6 66 1 4 00 4444 3 4 777 9999999999 6 9999999999 6 6 555555 5 22222222 9 4 888 0 33 6666666 7 33 55 0 22 66 33 4 0 5 00 4 99 7 7 22 2 66 00 0 8 000 222 000 00 8 0
consensus : NTGAA-TGAA-TTTATTGACAGCACCATT--ATACATAGGCATATAGTCAT--AAATAC----AACA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----A-TGTTGTTAATATG--AAGA-CACATCTAAGTTAATCAATTTTC-AA-CTT-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AAAGT-CTTCTAGCTGTTTTTACATTTG--ATGGATT-CATAACAGATTTT---AAAGG-A-TTATCTC---TCA-TATAACATTCTACATTAAATATGTCACTG-TATTGTA
Reference ( family-10496 ) : NTGAA-TGAA-TTTATTGACAGCACCATT--ATACATAGGCATATAGTCAT--AAATAC----AACA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----A-TGTTGTTAATATG--AAGA-CACATCTAAGTTAATCAATTTTC-AA-CTT-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AAAGT-CTTCTAGCTGTTTTTACATTTG--ATGGATT-CATAACAGATTTT---AAAGG-A-TTATCTC---TCA-TATAACATTCTACATTAAATATGTCACTG-TATTGTA
gi|1 : TGAA-TGAA-T--ATTTACGACACCATT--ATA-ATATGCATATAGTCAT--AATAAC----AACA-A-TCAG--AT----------TA-C----------ACAAATA-CA------AAAAA-----GATACAA-------GGATT-GACAATTTCA---T-G-TTA-AATACCAACT-----A----------------AAGA-CACATCTAG--TAATAAATTTTC-AT-CTT-TCTTTATCTAAATTCATAACT-TTCTTATAAA--T--TA-C-AAAGT--TTCTAGCTG-TTTTAC-TTTGAAATGGGTT-CATAACAGATTTT---AAAGATA-CTTTTTCTTTTCA--ATAACATTCTACA--AAATATGTCA-TGTTATTGTA
gi|10 : aTGAA-TGAC-TTTATTGACAGCACCATTT-ATACATAGGCATATAGTCAT--AAATAC----AACA-A--CAAT-AT----------TA-AGA--------ACAA-TAACA------AA--AT----------A---T---GGATTTGACAATGTCA-GTT-GTTTA-AATA--AAC--------------------A--AAGACCACATCTAGGTTAATAAATTTTC-AA-TCT-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--atctaaatatataaatgcaatataacacaaaatgttcttcaatttcaataaattgtacatgaatagcagaactttgtctctaggtaaggaggtcttggagtatctcccgtaaaacaaatgaagtgcagacattattcgtaaggaatcaagataatatttctgattcttaacgacattcaataattctttatatcatctagactaactatatctataaacatgttaatcttccgatattattattatcatatttttccaggtatacaaaatttgctaggtagtgtttctctaaatttatttacggatttatgtggaatcaaaaattaaagaaattttgtgtaatgtattagtttttgccaagatactctagccccaaagtatcttcctttaaaatgctgatacaattcaaaaataatataatcatttttattctaaatctttaatctttaaaagaaatttaaacatattttcataacactaaaaacaacaagaaattgccccaacccatatccacacaatatagatatatatagcaacacaatatatcttaaatatctgtttaattttccaa
gi|11 : aTGAA-TGAA-TTTATTGACAGCACCATT--ATACCTAGGCATATAGTCAT--A--TAC----A-------------T----------TG-C----------ACAA-TA-CA------AAGAATGAGGGACACTA---T---TGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----C-TGTTGTTAATATG--AAGA-CACATCTAAGTTAATCAATTTTCAAA-CTT-
gi|12 : aA-TGAA-TTAATTGACGACACCACT--ACACTTTCTCAAATAATCAT--AAATAC----AACA-AACCA-TTAT----------CA-C----------ACAA-TA-CA------AATGAGGAGGGACACAATATT---AAATTTGGCATAGTCA-GTTAA-TTATAAT----ATT-----A-TGTTGCT-ATATG--AACA-CACATCTAAGGTAAT
gi|13 : AC-AACT-----A-TGT----AATATA--AAGA-CACATCCAATTCAATCAATTTTA-AAACTT-CCCTT-TCTAATTTCATAACC-TTCTTAAGAAATT--TACC-AAAG----TCTAGCTGTTT
gi|14 : TGAA-TGAA-TTTATTGACAGCACCATTTAATACATGGGCATATAGTCAT--AAATAC----AACA-AGTCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACaaatcttggtaaagcatcatctggcttaacgccgtcatctc
gi|16 : aGAACTGAAGTTTATTGACAGCACCATT--A-ACCTAGCGATATA-TC-T--AAATAC----AACA-AAT--GTGAT----------TA-C----------AC-A-TC-C--------AGAATGAGGAACGCAA---T----CATTTGA
gi|17 : -TTA-AATAC-AACT-----A-TGTTGTTACTATG--AAGA-TACATCT-------TCAAC--------CTT-TCTTT-TCTAAATTCATAACTGTT
gi|18 : GAA-TGAA-TTTATTGA---CATCATT-----CACAGGCATACCGTGAT--AACTAC----AGCACAATt
gi|19 : g----AATA-AATCAGTGAT----------TA-CTGTCATTTACACAA-TA-CA------AAGAATGAGGGACACAA---
gi|4 : TGAA-TGAA-TTTATTGACATCACCATT--ATACATAGACATATAGTCAT--AAATAC----AACA-AATCGGTGAT----------TA-C----------ACAA-TA-AA------AATAATGAGGGAC----------------TCAC--TGTCA-GTT-G-TTA-AATAC-AACT-----A-TGTTGTTACTATG--AAGA-CACATCTAAATTAATCAATTTTC-AAACTT-TCTTT-TCTAAATTCATAACTGTT-------------TA-C-AAAGT-CTTCTAGCTGTTTTTACATTTG--CTGGGTT-CATAACAGATTTT---AAAGG-T-TTATCTC---TCA-AATAACATTCTTCATTAAGTATGTCACTG-TATTGTA
gi|5 : TGAA-TGAA-TTTATTGACAGCACCATT--ATACCTAGGCATATAGTCAT--AAATAC----AACA-AATCAGTGAT----------TA-C----------ACAA-TA-CA------AAGAATGAGGGACACAA---T---GGATTTGACAATGTCA-GTT-G-TTA-AATAC-AACT-----C-TGTTGTTAATATG--TAGA-TACATCTATGTTAATCAATTTTC-A----T-TCTTT-TCTAAATTCATAACTGTTCTTAAGAAATT--TA-C-AACGT-CTTCTAGCTGTTTTTACATTTG--ATGGATT-CATAACAGATTTT---AAAGG-A-TTATCTC---TCA-TATAACATTCTATATTAAATATGTCACTG-TATTGTAatctataatgatcataacaagaacaatataacacaaaatgttccttcattttcaataaactatttacatgaatagcatacacgttt
gi|6 : tTGAA-AGAA-TTTATTGACAGAACCA-T--ATACATA-GCATATAGTCAA--AAATACA---AACA-AATCA-TA------------TA-C----------ACAA-TA-C-------AAGAATGAAGG-CA-------------------GATGTCACGTT-G-TT--AATA--AACTTTGCGATTGTTGTTAATATGAAAAGA-CACATCTATGTTAATCAAATTT--AA-CTTATCTTT-TCTAAATT-ATATCTGGTCTTAAGGAATTAATA-CGAAAGTACTTCTAGCTGTTTTTACA-TTG--ATGGATTCCATAGCATATTTTTTAAGATG-ATTTATCTT---TCATTATAA-ATTATACATTTAATATGTCACTG-TATTGTAc
gi|7 : aTGAA-TGAA-TT-ATTGACAACACCATT--ATA------------GTCATGAAAATACTAACAACA-AATCAGTAATAAGTCACGAATAAC----------ATAA-TA-CATGTACAAAGAATGAGAGACACAA---TAATGGATTAGACATAGTCA-GTT----TA-A-TAA-AATT-----C-TATTGTTAATATA--AACA-CACATCTAAGTTAATGAATTTTC-AAATTT-TCTTT-TCTAGATTTATAAA-GTTCTT--TAAATT--TA-C-AAAGT-CTTCTATCT--TTTTACATTTG--ATGGATT-CATAACAG-TCTT---AAAGG-A-CTGTCTC---TCG-TATAACATTCTGCATTAAATATGTCACTG-atc
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|2 ): GTAATCTATAATGATCATAACAAGGACAATATTATACAAAATGTTCTTCATGAATAGCATGTACACGTTTGTCTCTGGGTACTGGAGGTCTTGAGTATCTTTTCTGTTTCAATATGAAGGGTATGTGCACTTATTCGTAATTTGGTCAAAATATATCTTTCTGATTTCAAGTAATTCTGTAGTTTATATTCATTTACACTATCTATAGTGCCATAAAATGTTAATTTTCCGATATCATTATTGGATATATTTTTCAGTTGATCAAAAATGTTGCTCTAGTGTAGTGTTTCTCTAATTCATTTATCAGAGTTTTATGTGGAATATTCAAAGAAATTAAGGATAACTTTTGTTGTAATGCAAGAAGTTTTTGTGTCAAGATACTATAGCTCCAAGTGTATTATCTTCTTTTAATGCTGATACAACCAAATCATAATTATTTTTGGATTATAAATCTTCTAATCTTTTACAGAATTT
Unaligned ( gi|3 ): CCTGTTTCAATATGAAGTGCATGAGCACTTATTCGTAATTTGGTCAAAATAGATCTTTCTGATTTCTTTAACATTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAATATACTGCTATAAGATGTTAATTTTGCGATATCATTATTTTATTTATTTTTCAATTGATCAACAATTTTACTAGTGTAGTGTTTCTCTAATTTATTTTTCAGAGTGTTATATGTGGCATATCCAAAGAATTTAAAAATAAGTTTTGTTGTAGTGTGCGACGTTTTTTGTGCCAAGATACTCTAGCCCTAAGTATATTGTCTTCTTTAAATGCTGATACCATCAAATTATAATTATAATAATTTTTTGATTCTTTTAAAGAATTTA
Unaligned ( gi|8 ): TGCATCAAGCGAAAAGGGACCTTTGTGACGAAGGAAATTCACCTTTTCAGTTTTTCTTAAAGAGCAAGTCCTCCTGATTGTTTTTATGTGAATGATTACCTGTATTTCAATAAATAATTGCACAAAAAACCTTCCCAAAATAAGTTGATAATTCTGCATTTTGACGTCATTAGCGTAACGTCGAAACAGCGTAACGTGATTTCAGTAAAAT
Unaligned ( gi|9 ): TATTGTCTTCTTTAAATGCTGATATAGCCAAATTATAATTATAATCAATTTTGGATTCTAAATCTTTTAATCTTTTAAAGAATTTAAACATTTATACAAGAACAAGGGAAATTGCCCCAACTCATATCGAACAGCAATATTAGATGGTTTATTATGAACACCAAGTATATCCTTAAATATTTGGTTTTGAGTTTTTTCAAA
Unaligned ( gi|15 ): AAGAACAAGGGAAATTGTCCTAACTCGTATAGAACAGCAATACATATAAGATTATTTATTATGAACACCAAGTATATCCTTATCTGGTTTTGAGTTTTTTCAAAG