lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111 1111111111111111111
lowQualScore : 1 111 1111 222 111 333333 1 222 2222 111 1 111 555555 1 222 22222 11 1 1 11 111 1 1 1 11 11 1 1 1 11 11 88888 1 1 11 2222 1 1 11 1 1 111 1111 11 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 11 1111111 33333 1 888888888888888888888888888888888888888888 11 1111111111 6666666666666666666666666666666 3333333 1111111 888888888888888888888888888888888888888888888888888888888888888888 3333 2 3333333333333 33 1 3333333333 2222 6666666666666666666666666666666666666666 44444444 3333333333 2222222 1 1 333 1 11 444444444444444444444444 11 11 1 55555555555555555555555555 2 1 11 1 3333333333333333333333333 11 444444444444444444444 2222 11 55555555555555 333333 3333333 1 11 22222222222 111 444444 2222 222 1 2222 1 777777777777777777777777 2222 2222 333 22222 8888888 222 1 1 11 444444 1 4 1 11 55555 11 1 22 5555555 1 1 1 1 4444 2 11 2 1 2 2 11 22 22 22 2 333 2 444444444 1 4444 2 333 44444 1 5555555555 3333 22 1 1 111 2 1 1111 1 1 11 1 1 1 1 1 1111 1 1 11 2 1 4 1 222222 1 11 1 1111111111111111111 1
lowQualScore : 0 6 888 99 6 6 2222 222 222 1 0 0 222222 3 000 0 6 6 99 0000 1 88 111 7 6 6 7 6 6 6 000 777777 0 0 6 3 4 777 3 33333 33 2 0 0 33 777 0 0 0 3 33 3 33 0 0 0 22 3 33 55555 0 0 66 4444 3 0 0 2 8 33 2 77 77 1 5 5 2 000 5 5 77 77 1 44 7 5 5 2222 0 11 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 66 00 777 3333333 4 4 4 5 66 33333 5 0 5 0 5 0 888 777777777777777777777777777777777777777777 44 2 7777777777 7 6 2 2222222222222222222222222222222 3 6 3333333 4444444 222222222222222222222222222222222222222222222222222222222222222222 777 9999 8 5 3 8888888888888 2 9 3 11 0 6 1111111111 1 3 1111 2 2 3 5555555555555555555555555555555555555555 11111111 8 3 0 9999999999 6 9999999 2 3 6 0 0 555 0 33 111111111111111111111111 00 00 3 7 0 33333333333333333333333333 3 3 3 0 0 2 22 0 8888888888888888888888888 2 22 777777777777777777777 1111 33 88888888888888 777777 3 6666666 3 4 11 44 0 33 77777777777 55 7 2 111 6 000000 4444 0 2 111 99 0 3 6 6666 6 3 4 6 4 9 7 333333333333333333333333 1 2222 0 6666 888 88888 3 8 0 0 8 8 6666666 0 8 2 8 444 7 7 7 2 3 7 0 88 999999 3 7 0 5 3 88 22222 88 3 00 1111111 2 7 6 5 6 6 3 3 3333 6 3 99 1 1 0 4 7 3 0 0 6 88 22 2 6 77 77 0 4 4 55 444 0 3 111111111 3 1111 7 3 888 11111 7 3 8888888888 6666 00 3 3 7 666 3 6 5 9999 2 0 0 22 0 0 2 0 0 3 7777 2 0 0 0 33 0 0 3 0 5 6 111111 0 0 99 66 0 3333333333333333333 3
lowQualScore : . . ... .. . . .... ... ... . . . ...... . ... . . . .. .... . .. ... . . . . . . . ... ...... . . . . . ... . ..... .. . . . .. ... . . . . .. . .. . . . .. . .. ..... . . .. .... . . . . . .. . .. .. . . . . ... . . .. .. . .. . . . .... . .. ............................................................................................................... .. .. ... ....... . . . . .. ..... . . . . . . ... .......................................... .. . .......... . . . ............................... . . ....... ....... .................................................................. ... .... . . . ............. . . . .. . . .......... . . .... . . . ........................................ ........ . . . .......... . ....... . . . . . ... . .. ........................ .. .. . . . .......................... . . . . . . .. . ......................... . .. ..................... .... .. .............. ...... . ....... . . .. .. . .. ........... .. . . ... . ...... .... . . ... .. . . . .... . . . . . . . ........................ . .... . .... ... ..... . . . . . . ....... . . . . ... . . . . . . . .. ...... . . . . . .. ..... .. . .. ....... . . . . . . . . .... . . .. . . . . . . . . . .. .. . . .. .. . . . .. ... . . ......... . .... . . ... ..... . . .......... .... .. . . . ... . . . .... . . . .. . . . . . . .... . . . . .. . . . . . . ...... . . .. .. . ................... .
lowQualScore : 0 7 333 22 7 7 7777 777 222 4 8 8 222222 2 222 8 7 7 22 8888 8 33 777 0 7 7 3 7 7 7 222 666666 8 0 0 2 0 555 2 22222 88 5 0 0 88 555 0 0 0 2 88 2 88 0 0 0 22 2 88 00000 0 0 00 8888 2 0 0 5 0 66 4 99 99 4 7 7 3 000 7 7 99 99 7 77 9 7 7 1111 1 77 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 99 66 888 4444444 4 4 4 0 44 22222 0 2 0 8 0 0 888 444444444444444444444444444444444444444444 22 2 7777777777 3 7 5 8888888888888888888888888888888 7 7 3333333 3333333 777777777777777777777777777777777777777777777777777777777777777777 777 7777 0 2 2 0000000000000 5 2 2 22 0 0 5555555555 2 2 2222 5 5 2 2222222222222222222222222222222222222222 00000000 0 0 8 8888888888 0 1111111 5 2 5 0 0 000 0 88 888888888888888888888888 22 22 2 0 0 88888888888888888888888888 2 2 2 0 0 5 55 0 0000000000000000000000000 5 55 555555555555555555555 2222 88 88888888888888 555555 2 8888888 0 5 00 55 0 22 55555555555 00 6 6 888 7 333333 3333 2 8 333 22 8 8 7 0000 7 0 4 0 0 8 6 000000000000000000000000 8 6666 4 4444 000 22222 0 0 8 8 0 0 2222222 8 0 2 3 333 3 3 3 3 3 3 7 33 000000 3 3 0 5 0 00 00000 33 3 00 0000000 0 3 7 0 7 7 3 3 3333 7 7 77 0 0 0 0 3 3 0 0 0 00 55 5 0 55 55 0 0 0 00 000 0 0 000000000 3 0000 3 7 333 00000 3 3 3333333333 0000 33 3 3 3 777 7 0 0 2222 5 0 0 00 0 0 8 0 0 2 2222 0 2 0 0 88 0 0 2 0 0 5 222222 2 0 88 88 0 7777777777777777777 3
consensus : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAGT-C--TCCATA-CTTTT-A-TATGTCGTAAATATGGG---CAAATGTAGGA--GTTCAAGTTTTTATAT-CA-T--GT----ANACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAACAG--AAACTGTAAAAAAAAAA--TCAATCAAA-ACATGAAAATCNTTTT---CTTTTGCTCTCATTCTAC---GTCATACAA--TGATGACGTAT-CAAA-TG--TAAACAA---ACGCG-CG-CT-GAACTTG--GAATGT--AC-TC-GC-CACAAACATTTC--ACATTTA-GTC-TAGGGT-ATA-TTGTGGA--AGCAGACATGGACATTT-C-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAG---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCGT-TT-ACAAGGCAC--GGTG---TG-ACA----TGTAGGCC---CAT--A--AACACTG--TACGTA---T--CA--ATG-GGTCGGAACGA-TTG-C-GAGAGG-----GCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGCT-GAA-CC-CAAGGC-TGTTGAT-ATAG-TACTGAGTGAATT-T-GT---AAG--T-----TN-CTA-T-T--------AA--AG----------TATTTTA-TNTTTAAAAA-----AAATCT-ACAAACTAAATA--------------TCG-ATACCCAA--TGATCTGATCNTG-C-G-CG--AGG--A----AAGCC--TA-T---T---CG----------GT------AA--T--A-AT-----T----AG--TC------CCCGATGTCC-AATGCA-TCATTTT-TTAA-TCATCATTTTGAATAAAAAGNG----TA-TTN-AGTATCAGAGTTTTTAAAAA-TCA-CCAACGTAAACAATGAATTTATTC---AT--C--AAAACGAATC----CCGAGGTAAATA-----------GT---------G---T-----------TAGAGAA---TATGTGGCGCGGCG-TTCGTGCTAAAACGA-AAAGA--TCATTTTGTTG-A-TTTTATATTTCTTTGCGCTA-CTAG-ATCAAT-AAT-TT--GTTT--CTT-A-------TCGGTC-TCTGC-TTTGTAG-ATACATCCATTTCG-TAACCAC--G--GGAANGTT----ATT--A--ATCATGGATTCA-TGGTG-C-ATCG-NTCCG-GG-AAATC-------A-TACCAGGAAGTA-CACATCT----C-T---TCC-AAGTGGGTG----CAT--GGAA--------------GTTGAA----CTGTTAAAA-ATT--GGTTTCTAAGGATAA-CTCA-AGTAC-TTNNTN---TTCTATTCAAAACNAAATTTGGA-CATA-TGGATAC-G--TACAAAG-A--GGGAACATGGCCT--ATTAATA-TTTTGGAGTC--AGAAGGTCAAAGGTC-ANTGTCACAGTGCATGGAAATTGGACAATGTTAATTTAGTGG--CGN---N-TGTTT-CCAC-CACGTAT---TCTTCAGTGATAAAT-GA-ATTA-T-TTGTTTGTA-ACAAA-TTATTTATACCTTTT-T-AGACAGT---AT-AGTTAT-ATGATAA--AATAAATACATAAAATTTGCAAATATG-AATTGAAGAA--AAT--ACA-TTT-ATAACAAATCAT-ATATTGTAATNGGNTTGAAATTTATGACAAA-ATGAGAAGGG--GGT-GGG-ACAC-A----AAATGGGTTCGAAACTTTGTTCC-AATGCACACTACCCCCAAC-TTTTT-TTCATT--CAAAATGAGC-AAAATATGGTTTCGAATCTGCAGTTGGCNATTTCAC-AAAAAGTTTAAATTCAGGAACTCTTGCNTANATTGAATTTTAATTGACCAAAAATCTGACNTAAAANTTNNGTCATATTCTCCCCAATAANGANTGNAGAGTAATCTGTTAT-TA-TTTCTAGAATTTTTGAAAAAAA-TTAT-GTAAAAGTTATAAA---AATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATT-CTGTCATGAA-TATTTG-TTTTATATT-G-TGTTT-CTTGTGGAAAATGGTGATTTTCGAAAGAAAA-AAG-TAACTTTCAGCAAAGGGG-TAA-CTTTGAG-GGGCTG-TAACTC--TTTAAAGTCCGCACT-AACATA-C--TTTTTCTTT-GTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTCAAGATGGGTTA-TTTAAAAAGTTTAATT-CAAT-GAAAAAAAT-TCATCTCACCAGAG-AACATCCTTAAG
Reference ( gi|1 ) : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAGT-C--TCCATA-TATTT-A-TATGTCGTAAATATTTG---CAACTGTAGGA--TTTCAAGTTTTTATAT-CA-T--GT----ATACGCAAAA-TAG---TACATAAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAACAA--AAACTGTAAAAAAAAAAAATCAATCAAA-ACATGAGAATCATTTT---CTTTTGCTCTCATTCTAC---GTCATACAA--TGATGACGTAT-CAAA-TG--TAAACAA---ACGCG-CG-CT-GAACTTG--GAATGT--AC-TC-GC-CACAAACATTTC--ACA-----GTC-TAGGGT-ATG-TTGTG-A--AGCAGACATGGACATTT-C-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-ACG--TT-ACAAGGCAC-AGGTGGAATGTACAATATTGTAGGGC---CAT--A--AACACTG--TACATA-CGT--CA--ATGTGGTCGGAACGA-TTG-C-GAGAGGACGACGCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGCT-GAA-CC-CAAGGCCTGTTGAT-ATAG-TACTGAGTGAATT-T-GT---AAG--G-----TG-CCA-T-T--------AA--AG----------TATTTTA-TATTTAAAAA-----AAATCT-ACAAACTAAATA--------------TCG-ATCCCCAAATTGATCTGATCCTG-C-G-CG--AGG--A----AAGCC--T--T---T---CG----------G-------AA--T--A-AT-----T----AG--TC------CCTGATGTCC-AGTGCAATTATTTT-TTAACTCATCATTTTGAATAAAAAGGG----TA-TCA-AGTATCAGAGTTTTTAAAAAATCA-CCAATGTAAACAATGAATTTATTC---AT--C--AAAATGAATC----CCGAGGTAAA-A-----------AT---------G---T-----------TAGAGAA---TATGCGGCGCGGCG-TTCATGCTAAAACGATAAGGA--TCACTTTGTTG-ATTTTTATATTTCTTTGCGCTA-CTAG-ATCAA--AAT-TT--GTTC--CTT-A-------TCGGT--TGTGC-TTTGTAG-ATACATCCATTTTG-TAACCA---G--GGAATGT-----ATT--A--ATCATGGAT-CA-TGGTG-C-ATC--TTTCG-A--AAACC-------A-TACCAGGAAGTA-CACA-CT----C-T---TCC-AA-TGGGTG----CAT--GGAA--------------GTTGAA----CTGTTAAAA-ATT--GGTTTTTAAGGATAA-CTCA-AGTAC-TTGTTT---TTCTATTCAAAACAAAATTTGGA-CATA-TGGAT---G--TACAAAG-A--GGAAACATGGCCT--ATTATTA-TTTTGGAGTC--A-AAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTG-ACAGTTTTAATTTAGT----CAC---T-TGTTTTCCAC-CACGTAA---TTTTCAGTGATAAATGGA-ATTAATTTTGTTCATATACAAA-TTATTTATACCTTTT-T-AGACAGT-TGATTGGTTAT-ATAATTA--GATAAATACATAAAATTTGTAAATATG-AATTGAAGGA--AAT--A-A-TTT-ATAACAAATCATCATATTGTAATTGATGTGAAATTTATGACAAAGATG-GAAGGG--GGT-GGG-ACA--A----AAATGGGTTCAAAACTTTGTTCCCAATGCACACTACCCCCAAC-TTTTT-TTCATT--C-AAATGAGCAAAAATATGATTTCAAATCTACAG-TAGCAATTTCAC-AAAA-GTTT-AATTCAGAAACTCTTG-CTAGATTGGATTTT--TTGAC--AAA-TTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTATA---TAATCTGTTAT-TA-T--CTAGAATTTTTGAAAAAAAATTAT-G-AAAAGTTATAAA---A-TTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATT-ATGTCATGAA-TATTTG-TTTTATATT-G-TGTTTTCTTGTGGAAAATGGTAAGTTTTAAAAGAAAA-AAG-TAACTTTCAGCAAAGGGG-TAA-CTTTCAG-GGGCTG-TAACTC--TTTAAGGTCCGCACT-AACATA-C--TTTTTC-TT-GTGTTTGAATTTGCCGTTCTGGTCAAGATGAATGAGTTTAAAATGGGTTA-TTCAAAAAGTTTAATT-CAA--GAAAAAAA---------ACCAGAG-AACATCCTTAAG
gi|6 : GGGTGT-ACTCTGGTGGC-GATTTTTTACACC--G-C-GAGTGAGT-C--TCCATA-CTTTT-AATATGTCGTAAATATGGG---CAAATGTAG-A--GTTCAAGTTTTTATAT-CA-T--GTC---ATACGCAAA--TAG---TACATTAATGTT-T-GTTTT-GTTT--TTATTAGA-TGAACAG--AAACTGTACAAAA------TCAATCAAA-ACATGAAAA--ATTTTTCACTTTTGCTCTCATTCTAC----TCATACAA--TGATGAC-TATACAAA-TG--TAAACAA---ACTCA-CGACT-GAACTTG--GA-TGT--AC-TC-GC-CA--AACATTTC--ACATTTA-GTC-TAGGGTTATA-TTGGGGA--AGCAGACATGGATTTTTCC-GTCAGAAATTAGGCT-GCATCT--ATT-TTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACTAGTTGCAGC-G-GC-ACAA----TC-C-GCGT-TT-GCAAGCCA--ACGTG--ATGTAC-----TGTA-GGC---CATACA--AACACTG--TACGTA------CA--ATG----------GA-TGC-C-GAGAG------ACGT--GAATGGG--AGAAT---TATA-GC---ACGTA-GTGGGCT-GAAGCC-CAAGG-ATGTTGAT-ATAGTTTCTGAGTGAATT-TGGT---AAG--T-----TGTCTA-T-T---------A--AG----------TATTTT--TATTT-TAAA-----AAATCT-ACAAACTAAATA--------------TCG-ATACCCA-----ATCTGATCATG-C-G-CGCAAGG--A----AAGCC-------------CG----------GTA-----AA--TTAG-ATTTCTAT----AG--TC------CCTGATGTCCTAATGCA
gi|15 : gaatttaGGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGATT-C--TCCATA-CTTTT-A-TATGTCGTAAATATGGG---CAAATATGGGA--GTTCAAGTTTCTATAT-CA-T--GTATACATACGCAAAG-TAA---TACATTAATGTG-T-GTTTTTATTT-GTTATT-GT-TGAACAG--AAACTGTAAAAA
gi|23 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACA--G-C-GAGTTAGT-T--TCCATA-
gi|7 : taaGGTGTCACTCTGGTGGTAGATTTTT---ACCACG-C-GAGTGAGT-CACTCCATACTATTT-A-TTTGTCGTAAATATGCGGCACGATGGTAGGA--GTTCAACTTTTT-TATTCAGTAAGT----AGACGCAAAAATAAGTTTACATTA-TGTT-T-GTTTTTGTTTTGTTATT-GTATGAACAG--AAACTCTAAAAAAA-----TCAATCAAACACATGAAAATCATTTT---ACTTAGCTCTCATTCTAC---GTCATACAA--TGATGACGTAT-CAAA-TG--TAAACAA---ACGCGACG-CT-GAAC-TG--GAATGT--ACTTC-GCACAAAAACATTTCAAACATTTAGATC-TAGGGT-ATATTTGTGAA--AGCAGACATGGACATTT-CGGTCAGAAATTA-GCTGGCATCTAAATTTTGCTCAC-AG--T--GAGTGGA-CA-GAAGGAATATAA-TAA-TACTCAGGCACCAGCTGCAGCAGCGCAACAA----TCAC-GCGTTTT-ACAA-ACACTCCGTG------ACAA-AATGTAGGTCCCGCAT--A--CAAACTG--TACGTA------CA--ATA-GGTCG--ACGA-TTG-C-----CGAAGACGCGTAGAAATGGGC-AGAAT---TCTA-GGC-AACGTACGT-GGCT-GAA-CCGCAAGG-CTGTTGAT-ATAG-TTCTGAGTGAATT-T-GT---AAGTTG-----TT-CTA-T-T--------TA--AG----------TATTTTA-TTTTT--TAA-----AAATCTAACAAAATAAATA--------------TCG-AT
gi|8 : agtCTCTGGTGGT-GATTTTTT--ACA--GGC-GAGTGAGTTC--TCCATA-CCTTTTA-TTTGTCGTAA-TATGGG---CAAATGTAGGA--GTTCAACTTTTTATAT-CA-T--GT----ACACGCAAAA-TAG---TACATTAATGTTATAGTTTTTGTTT-GTTAT--GT-TGAACAAGAAAACTCTAAAAAAAAAAT-TCAA-CAAA-ACATGAAAATCTTTTTA--CTTTTGCTCTCAT-CTAC---GTCATACAAAATGATGACGTAT-CAAAATGCTTAAACAAGGGACGCG-CG-CTAGAACTTTTTGAATGTTTAC-TCAGC-CACTAACATT-C--ACATTA--GTCCTAGGGT-ATA-TTGTG-ACCAGCAG-CATGGACATTT-C-GTCAGAAATTAGGCT-GCATCT--ATATTTCTCACAAG--TTGAAGT-GACCA-GAAGAAA---AATTAA-TA--CAG--ACCACTTGCAGCAG-GC-ACAA----TCACGGCGTTTT-ACAA-ACAC----TG---TG-ACA----TGTAGGCC---CAT--GACAACACTG--TACGTA------CA--ATG-GGTC-GAACGATTTGCC-GAGA----GACGTG---GAATGGG--AGAAT---TCTATGCA-AGCGTA-GT-GGCT-
gi|22 : CTGGTGGT-GATTTTT---ACC--G-CAGAGTGAG--A--TCTATA-T-TTT-T-TATGTCGT-AATATGGG---CAAATGTAGGAGTTTTC-AGTTTTT
gi|18 : GTAGGA--GTTCAAGTTTTTATAT-CA-T--AT----ATATGCAAAA-TAG---TACATTAATGTT-T-ATTTTTGTTT-GTTACT-AT-TGAACAG--AAACTGT----AAAAAAAATCAATCA
gi|2 : T-CA-T--GT----AAACGCAAAA-TAG---TACATTTATGTT-T-GTTTT-GTTT-GTTATT-GT-TGAAACA--AAACTGTAAAAAA------TCAATCAAA-ACATGAAAATCTTTTA---CTTTTGCTCTCATTCTACTACG-CATACAA--TGATGACGTAT-CAAA-TG--TAAACAA---ACGCG-CG-CT-GAACTTG--GAATGT--AC-TC-GC-CACAAACATTTC--ACATTTA-GTC-TAGGGT-ATA-TTGTG-A--AGCAGACATGGACATTT-C-GTCAGAAATTTGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA--A-GAAGAAA---AA-TAA-TA--CAG--ACTAGTTGCAGCAG-GC-ACAA----TCAC-GCG--T-----AAGCAC--GGTGACATGTACA----TG------------------ACACTG--T---TA-CGTAACA--ATG-GGTCG-AACGA-TTG-CCGAGAGA------CGT--GAATGGG--AGAAT----ATA-GCA-ATTATA-GT-GGCTTGAA-CC--AAGGC-TGTTGAT-ATAG-GTTTGAGTGAATT-T-GTTGTAAG--T-----TG-TTT-C-T--------AATAAG----------TATTTTT-TATTTTTAAA-----AA-TCT-A-AAAC-AAATA--------------TCG-ATACCCAA-----TCTGATCATG-CCG-CGGCAGG--A----AAGCCGGTAAT---TAGACG----------G-------G---T--A-AT-----T----AGATTCTATAGTCCTGATGTC---ATGCA-TCATTTT-TTAA-TCATCATTTTGAATAAAAAGGG----TAATGT-AGTATCAGAGTTTTTAAAAA-TCAACCAACGTAAAACATGAATTTATTC---AT--TCAAAAACGAATC----C-GAGGTAAATA-----------GT---------A---TATATTCGCATTTAGAGAA----ATAAGGCGCGGCG-TTCGTGCTAAAACAA--AAGA--TCATTTTGTTG---TTTTATATTTCTT-G-GCTA-CTAG-AACAAT-GAT-TTTTGTTTAGCTT-AACCCAGATCAGTC-TCTAG-TTTGTAATCTCCATTCATTGCG-TACCCG---G--TGAAGTT-----ATT--ATAATC-TGG-T-TA-TG----C-CTCGATTCCGTAGCAAACTTCCTTTGA-TACCAGGAAGTA--ACA-TTGGATC-TACGTCC-AA---GGTGGCCTCATCCGGAATAAGACACATTCATGTTGGAAGTGCTGT-AACA-ATTTAGGTTTCTAAGG-CAA-CTCA--GTAC-TTTGTA---TTCTATTCAAACAAAAATTTG-A-CATA-TGGATACGG--CACAAAG-AAAGGGAACAATGCCTGTATAAATA-TTTTGGAGTCCAG-AAGGTCAAAGGTCGAATGTCACAGTGCATGGAAATTGGACAATGTTAATTTAGTTGATCGCATAC-TGTTT----C-CACATAAATTCTTTCAGTGATAAATGGGCATTA---TTGTTTGTA-ACAAAATTATTTATACCTTTT-T-AGAAAAT------AGTTAT-ATGATAA--AATAA-TACATAAAATT-G-AAATATGGAATTGAAGGACAAAT--ACA-TTTTATAACAATTCAT-ATATGGTAATGAGTTTGAAATTTATGACAAA-ATGAGAAGGGTTGGT-GGGGACACCA----AAATGGTTTCAAAACTTTGTTCCAAATGCACACTACCCCCAAC-TTTTTATTCATTAAA-AAATGA-C-AAAATATGGTTTCGAATCTGCAATTGGCAA-TTCACAAAAA-GTTTAAATTCAGGA--TCTTGCCTATATTGAATTTTAATTGACCAAAA-TTTGACATAAAAATTTGGTC--ATTTTCCCCA-TAAGGAATGTAGAGTAATCTGTTATATATT--CTAG-ATTTTTGTGAAAAAATTATCT-AAAATTTCTAAAGACA-TT-TAAATCCATTATTAAT----------TTTCATGAAATAAAAGATAATGAAGA-ATTATTCATGTCCAGAA-TATTTGTTTTTAT-TT-GCTGTTTTGCTGTGGAAAATGGTGATTTTC--AAGAAAACAAG-TAA-TTTCGACAAAGGGGTTAA-TTCTTGGAGGGCTGTTAACTC----TAAGTCCCGCACTAAACATA-CCTTTTTTCTTT-GTG-TTGAA--TGCCTTTCT-GTCAAGATGAATGAG-TTAA---GGGGTA-TTT-AAAAGTTTAATTCCAATGGAAAAA
gi|21 : -GCATTTT-ATCATTCTCACAAGGGT--GAGT-GA-CA-GAAGAAG---AA-TGATTA--CAG--AC------CAGCAA-GC-ACAAGATTTCGC-GGG--T-----AAGCAC-CGGTGtttcat
gi|3 : T--ATTATTCTCACAAG--T--GAAT-GG-CA-GAAGGAG---AA-TAA-TA--CAG--ACCAGCT-CAGCAG-GC-ACAA----TCAC-GCG--TTTACAAG-TAC--GGTG------ACA----TGTAGGCC---TAT--AC-AACACTACCTACAAAATGTA-CT--ATG-GGTCG-AACGA-TTG-CCGAGAGG------CGT--GAATGGG--AGAAT---TATA-TAACAGCATA-GT-GGCT-GAA-CC-CAAGGC--------------TACTGAATGAATT-T-GT---AAG--T-----TT-TTT-T-TTAATGTAGAG--AG----------TAATT----GTCTAAAAC-----AA-TCT-ACAAACTAAATA--------------TCG-ATACCCAATCTGGTC--ATGCCA-C-G-C---AGG--A----AAGCC--TA-T---T---CG----------GT------AAC-T--ATAT-----TCTATAG--TC------CCTGATGTCC-AATACA-TCATTTA-TGAATT-ATTATTTTGAATAAAAAGTG----TA-ATATAGTATCAGAATTTTTAAAA--TCA-CCAACGTAAGCAATGAATTTATTC---AA--C--AAAAAGAATC----CCGAGGTAAA-ATAGTTTATCGCAT-------------T-----------TAGAGAA----ATGTGGCGCGGCG-TTCATGCTAAAACGA-AAGG---TCATTTTGTTTTAATTACATGTTTCTATGTGGTA-CTAG-ATCAAT-AAT-TT--GTTT--CGG-A-------TCTGT--TCTGT-TTTGTAG-ATACATCCATTTTG-TAACCA---CATGGAATGTT----ATA--A--ATCATGGATTCA-TGGTG-CCATC--ATTCG-GG-AAATC-------A-TACCAGGAAGTA-CGCATCT----C-T---TCG-AAGTGGGTA----CAT--GGAA--------------GTTG-A----CTGTTAAAATAAT--GGGTTTTAAGGAAAA-CTCA-AGTA----GTTTGTATTCTATTC-AAACCAAATTTGGA-TACA-TGGATAC-G--TATAAAGAA--GGGAACATG---T--A-TATTAGTTTTGGAGTC--AGAAGGTCAAAGGAA-ATTGTCACAGTGCATG------G-ACAATATTGATTTCGTGG--CAT---A-TG-TTTCCA--CATGTAT---TTTTCAGTGATAATT--C-ATTATTATTGTTTGTGTACTAC-TTATTTCTACTTTTT-T-AGACAGT---AT--GTTAT-ATGATAA--AATAAATAC--AAAATTTGCAAATATA-AATTGAAGAA--TATGCA-T-TTT-ATAACAAATCAT-ATATTGTtcatacgt
gi|13 : atgtT--ATT-TTCTCACAAG--T--GAATGGG-CACGAAG-AG---AA-TAA--A--CAG--ACCA-CT-CAGCA--GC-ACAA----TCAC-GCGT-TT-ACAA-GTAC---GTG------ACA----TGTAGGCC---TAT--AC-AACACTACCTACA-A-AAT--TACTATG-GGTC-GAACGATTTG-C-CGAAG------GCGT---AATGGAGCAGACTGGATATA-ACA-CACATA-GT-G--T-TAA-CC-ACAGGC--------------TACTGAATGAATTCT-GT---AAG--tgt
gi|12 : tttgaatccatgtGCACAATACTGTACATC---CAT--AT-GACACGG--TGCGTA-C-----A--ATG-GGTCG-AACGA-TTGTC-GAGAGG------CGT--GAATAGG--AGAAT---TATA-GCA-A-CGTA-GT-GGCT-GAA-CC-CAAGGC-TGTTGAT-ATAG-TACTGAGTGAATT-T-GT---AAG--T-----TGTCTATT-T--------TA--AG----------TATTTTA-TTTTTAAAAATCTACAAACTT-AGAAACTAAATA--------------TC-------------GATCTGATCCTGCC-G-CGC-AGG--A----AAGCG--T---------------------------------------AT-----T-----------------CCAATGCCC-AATGC-ATAATTTT-TTAA-TCATCATTTTGAATAAAAAGttttttttctaagtgttatgagaagtaattgtctaaacaatc
gi|4 : tgGAACGA-TTC-C-GAGAGG------CGC--GAA---G--GCAAT---TA--------ATGT------GCT------C-TACG--TTGCTGATGATAG-TACTGAGTGAATT-TTAT---AAA--GGTTTTTT-TTA-TGT--------AC--AGATCAATTGTCTATTTTAACATACAAATA-----AAATCC-ACAAACTAAGTAAAGTTACTGGGTTATCGTATTACCCAATTA---TGATCTTG-C-CTCT--AGGTCA----ATACC--T--TAGAT---AGCTGCAGGAGCG-------AA--T--A-TC-----T----CG--TTA-----CCCGATGTCC-AATGCT-TTAGTTTATTGAATTATCACTTTGAATAGAAAATGAAATTA-TTA-A----CATAGTTTTT-AAATATCA-CGAACGAAAACAATGAATCAATTCCCGATGGT--AAAATAAATCTTCTCCCA-GT-------------------------------T-----------TAGAGAAAGTTAT--GGCGCGGCGTTTCGTGCTGAAAC--CGAATA--TCATTTTGTTG-A----TATATTCCTTTGCTCTAGATAGTATCAA--TGTATT--GTTT--CTTGA-------TCGGTCCTCCGCTTTTGTAT-ATACATTC--TTTGATAACCACATG--GAAAGGT-----TAT--A--A-CATGGAT-TACTAGTGTC-ATC--AGTCG-A--AAATC-------ATTACCAGGAAGTACCACATCT----CGT---TCCTTG-TGGGTG----CAT--GGAA--------------GTTGAC----TTGTTAAA-----------------GATAATCTCAGAGTACTTTGTAT---TCGTATTNNNNNNNNNNNNNNNN-NNNN-NNNNN---N--NNNNNNN-N--NNNNNNNNNNNNN--NNNNNNN-NNNNNNNNNN--N-NNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNCTTTAGG----GGA---TATGTTT---ACACATGTAT---TCTTCAGTTATAAAT-AA-ATTA---TTGTTT--------A-TTATTTAT-CCTTCTAT-AGACAATATG-TTAG-TATGATAAT
gi|19 : aagtgtaatgggcAATGGG--GGAAT---TATA-GC--AACGTA-GG-AGCT-GAC-CC-CAGGGC----TGCT-AAAG-TATTGGGTGAATT-G-GT---AAG--a
gi|11 : ATCTGATCTTG-C---CG--CGC--ATGTCAAGCC--TA-G---T---CA----------GTTAGCCTAAGGT--A-ATA----T----AG--TC------CCCGATGTCC-AATGC----ATTTT-TTAAttttttttaatgtacagagcagttgtcta
gi|5 : tatcatctatatacaTCATCATTTTGAATAAAAAGG-----TA-TTT-AGT-TCAGAGTTTTTAAAAA-TCA-CCAACGTAAACAATGAATTTATTC---AT--C--AAAATGA-TC----CCGAGGTAAATA-----------GTTTATATATCGCATT-----------TAGAGAA---TATG--GCGCGGCG-TTCGTGCTAAA-CGA---AGA--TCATTTTGTTG-ATTTT-ATATTT--TTGCGCTA-CTAG-ATCAATAAAT-TT--GTTT--CTT-A-------TCG-T--TCTGC-TTTGTAG-ATACATCCATTT-G-TAACCAC--A--GGAATGTTATAAATCTAA--ATCATGGATTCA-TGGTC-C-ATCA-TTCCG-G--AAATC-------A-TAC-AGGAAGTA-CACATCT----C-T---TCC-AAGTGGTTG----CAT--GGAA--------------GTTGA-----CTGTTAAAA--TT--GGTTTCTAGAGATAA-CTCA-AGTAC-TTTGTA---TTCTATTCAAA-CAAAATTTGGAACATAATGGAT---AC-TACAAAA-G--GGAAA--TG--CT--ATTAATA-TTTTGGAGTC--AGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATGTTA-TTTAGTGG--CAT---T-TGTTT-CCAC--ATGTAT---TCTTCAGTAATAAAATGA-ATTA-TTATGTTTGTAAACAAA-TTATT-ATACCTTTT-TTAGACAGT---AT--GTTAT-ATGATTATTAATAAATACATAAAATTTGTAAATATG-AATTG-AGAA--AAT--ACATTTT-AT-ACAAATCAT-ATATTGT-ATTGAGTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGGG-ACAC-A----AAAT-GGTTCAAAACTTTATT-CCAATGCACA-TA--CCCAAC-TTTTT-TTCATT--CAAAATGAGC-AAAATATG-TTTCGAATCTGCAaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttctcccatatagataaatttagcgcagatttcgtcctaaaacaaaaaagagatcattttgttga
gi|11 : aa-----------TAGATAA----ATTTAGCGCAGAT-TTCGTCCTAAAACAAAAAAGAGATCATTTTGTTG-A
gi|20 : tatcatctatatacaatctgatcttgccgcgcatgtcaagcctagtcagttagcctaaggtaatatagtccccgatgtccaatgcattttttaaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttctcccata---TTCTATT-AAAACCAATTTTG----ATA-TAGAT---GCGTACAAAA-AT-GGGAATATG-CCT--ATCG--A-CTTTGGGGCC--AGAAGGTCAAAAGTC-ATTGTCACAGTGC
gi|14 : AAATTTGGA-CATA-TGGATAC-G--CACAAAG-AG-GGAAACAT-GCCT--ATTAATA-TNNNNNNNNN--N-NNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNN----NNN---N-NNNNNNNNNN-NNNNNNN---NNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNA-TTATTTATACCTTTT-T-AGACAGT---AT--GTTAT-
gi|17 : --GGT-GG--ACA--ACATGAAAAAGGTTCGAA-CTGTGTTCC-AATGCACACTACCTCTAACATTTTT-TTCATT--CAAAATTAGCAAAAATGTGA-TTCAAATTTACAG-TAACTATTTCAA-AAgnnnnnnnnnnnnnnnnnnnnnnnnnatat
gi|9 : tATTTCAC-AAAAAGTTT-AATTCAGGAACTCTTG-ATAGATTGAATTTT--TTGAC--AAAATCTGACTTAAAATTTGTGTCAT-TTCTCCCCAATAATG-CTAGA---TAATCTGTTAT-TA-TTTCTAGAATTTTTGAAAAAAA-TTAT-GTAAAAGTTATAAA---AATTATAGAT-TAGGATTAAT----------TTTCATGAAATAACAGATAATGA--AGATTATT-CTGTCATGAA-TATTTG-TTTTATATT-G-TGTTT-CTTGTGGAAAATGGTGATTTTCAAGA---AA-AAG-TAACTTTCAGCAAAGGGG-TAA-CTTTGAG-GGGCTG-TAACTC--TTTAAAGTCCGCACT-AACATACC--TTTTTC-TT-GTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGTTC-AGATAGGTTA-TTCAAAAAGTTTAATT-CAA--TGAAAAAATTTCATTTCACCAGAG-AACATCCTTAAcaa
gi|10 : attggcaatttcacTTAT-TA-TTTCTAGAATTTTTGAAAAAAA-TTCT-GTGAAAGTTATAAA---AATTATAAAT-TATGATTAATNGTGATTAATTTTCATGAAATAAAAGATGATGA--ATATTATT-CTGTCATGAAATATTTG-TTTTATATTTG-TGTTT-CTTGTGGAAAATGGTGATTTTCA---GAAAA-AAG-TAACTTTCAGCAAAGAGG-TAAACTTTGAG-GGGCTG-TAACTTCTTTTAAAGTCGCCACT-AACATA-C--TTTTTCTTT-GTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTATTTTAAAAAGTTAAATT-CAAT-GAAAAAAATGTCATCTCACCAGAGAAACATCATTAAGtgtgtacataaaagtgctgctttcattttgtgtatttttagatcatttgaaataaggtc
gi|16 : TTTGAAAGAAAA-AAACTA--TTTCAGCAAAAGGG-AAA-CTTTGAG-GGGCTG-TA-TTG--TTTAGAGTCCACACT-AACACA-C--CCTTTT-TTAGTGTTTAGA-TTGCCTTTCTAATCGAGATGAATCTG-CCGAAATCGATTA-TT---AAACT---------A--GA------------------AGAG-AACACCCTTAAtttcatcgttattttgttatattttcag
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111 111111111111111111111
lowQualScore : 111 1111 111 1111 11111 1 11111 11 11 111 111 11 11 111 1 11 1 1111 111 11 333333333333333333333 111 22 11 11111 333 22 1 22222222 11 11111111111 33333333333 1111111111 11 11111 22222222222222 33333 11111 33 11 222222222222222222222222222222222222222222222222222222222222 1111111111 1111 11 222222222222222222222 2222 111111111 11 11 3333333 22 1 111111 333333 1 22222222222 11 22222 111 111 11 44444444444444 222222 22222222 111 111111 1 222222222222 2 11111 22222 1111111 2 11 1 1 11 2 1 1 1 11 2 11 11 1 1 1 1 1 1 11 2 22 33 44 111 2 444444444 11 2 11 1 4444444444 2222 1 1 1 1 1 1 1 22 111 11 11 1111 1 111 1
lowQualScore : 8 5 555 77 5 5 5 5 77 888 6 7 6 6 5 77 5 5 77 7777 1 55 000 5 5 5 5 0 5 5 5 999 4444 11111 8 1 6 0 44444 11 8 8 11 444 8 8 8 111 0 11 8 8 8 66 0 11 66 8 8 8 8 444 0 6 6 11 9 66 66 5 0 5 888 5 5 66 66 0 2 5 5 5 0000 5 000 22 4 222222222222222222222 0 333 11 88 77777 111 66 4 11 8 7 4 66666666 00 99 777 4 9999 4 4 4 4 4 4 66 4 777 4 8 11111111111 77 4 11111111111 9999999999 00 5 1 999 44444 5 0 99999999999999 5 5 22222 1 44444 22 33 555555555555555555555555555555555555555555555555555555555555 5 5 6 5 5 8 8 9999 0 8 0 8 9999999999 4 0 7777 11 111111111111111111111 3333 6 6 6 222222222 99 77 1 5 3 8 8 0 99 11 4444444 11 8 8 0 1 0 666666 1 0 111111 88 0 11 55 6 77777777777 11 00000 8 8 0 444 8 444 8 11 77777777777777 666666 0 44444444 8 0 8 88 22 1 6 11 4 1 5 5 1 5 444 5 5 1 555555 3 1 5 5 0 5 1 2 2 2 1 222222222222 6 5 2 6 77 33333 77777 6 2 9999999 6 6 1 99 6 6 6 1 11 3 3 3 0 0 3 33 2 0 3 0 0 7 1 11 3 7 33 0 33 66 6 2 3 0 0 2 2 0 0 0 3 2 0 3 22 3 0 1 3 3 7 7 7 00 1 00 66 0 1 1 22 333 0 3 1 555555555 3 33 3 0 3 3 33 3 0 3333333333 4444 0 0 3 0 0 0 0 0 88 88 8 55 222 8 8 0 11 0 8 8 11 3 0 88 3 0000 0 0 88 0 0 3 777 3 3
lowQualScore : . . ... .. . . . . .. ... . . . . . .. . . .. .... . .. ... . . . . . . . . ... .... ..... . . . . ..... .. . . .. ... . . . ... . .. . . . .. . .. .. . . . . ... . . . .. . .. .. . . . ... . . .. .. . . . . . .... . ... .. . ..................... . ... .. .. ..... ... .. . .. . . . ........ .. .. ... . .... . . . . . . .. . ... . . ........... .. . ........... .......... .. . . ... ..... . . .............. . . ..... . ..... .. .. ............................................................ . . . . . . . .... . . . . .......... . . .... .. ..................... .... . . . ......... .. .. . . . . . . .. .. ....... .. . . . . . ...... . . ...... .. . .. .. . ........... .. ..... . . . ... . ... . .. .............. ...... . ........ . . . .. .. . . .. . . . . . . ... . . . ...... . . . . . . . . . . . ............ . . . . .. ..... ..... . . ....... . . . .. . . . . .. . . . . . . .. . . . . . . . .. . . .. . .. .. . . . . . . . . . . . . . . .. . . . . . . . . .. . .. .. . . . .. ... . . . ......... . .. . . . . .. . . .......... .... . . . . . . . . .. .. . .. ... . . . .. . . . .. . . .. . .... . . .. . . . ... . .
lowQualScore : 0 7 777 99 7 7 7 7 99 777 7 3 7 7 7 99 7 7 99 9999 0 99 000 7 7 0 7 1 7 7 7 666 1111 00000 0 0 0 8 88888 00 0 0 00 000 0 0 0 888 8 00 0 0 0 00 8 00 44 0 0 0 0 444 8 0 7 99 8 99 99 0 0 0 888 0 0 99 99 2 5 6 0 0 6666 0 444 11 4 666666666666666666666 2 888 99 88 55555 888 11 4 77 9 8 4 11111111 66 55 000 0 3333 0 0 0 4 4 4 22 4 888 4 9 88888888888 00 4 66666666666 4444444444 66 7 0 999 33333 7 7 44444444444444 0 0 66666 0 44444 99 66 000000000000000000000000000000000000000000000000000000000000 7 7 7 7 7 8 0 2222 8 0 8 0 6666666666 6 8 0000 88 222222222222222222222 8888 0 7 7 777777777 22 55 0 6 2 0 0 8 00 00 0000000 22 0 0 8 4 8 222222 0 8 888888 88 8 66 66 0 00000000000 00 00000 0 0 8 000 0 000 0 00 00000000000000 444444 8 88888888 2 8 0 88 00 0 7 00 8 0 7 7 6 7 666 7 7 0 777777 1 6 7 7 3 7 0 5 0 8 5 555555555555 7 2 5 7 55 77777 33333 7 8 5555555 7 7 0 22 7 2 7 4 00 2 2 2 5 0 2 88 5 0 2 0 0 3 0 77 3 3 88 0 88 55 5 0 2 0 0 5 5 0 0 0 2 5 0 2 55 7 7 0 2 2 3 3 3 77 0 77 77 7 0 0 00 777 7 7 0 000000000 2 22 2 0 2 2 88 2 0 8888888888 8888 0 0 2 0 0 0 0 0 66 88 0 88 222 0 0 8 00 8 0 0 00 8 8 88 2 6666 8 8 88 8 0 2 222 7 3
consensus : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATG-TAGGAG--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTG-TTTGTTATT-GT-TGAA-CA--GAAACTGT--AAAAAAAAAA-TCAATCAAA-ACATGAAAATCTTTTTACTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGTGG-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCG-TTTACAAGGCA-C-GGTG---TG-AC---A----TGTAGGCC---CATA--AACACTG--TAC-----GTA---CA--ATG-GGTCGGAACGA-TTGCC-GAGAGG-----GCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAAG-----T--T-TCTN-T-T--------A--AAG----------TA--TTTTA-TTTTTAAAAA-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCCAA--T-ATCTGATCNTG-C-G-CGC-AGG--AAAGCC--T---AT---T-------CGGT------AA--TA-AT-----T----AG--TC------CCCGATGTCC-AATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGNGT-ATTT-AGTATCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTC---AT--C--AAAATGAATC----CCGAGGTAAA-TAGTTTAT-----GCAT--------TTAGAGAA-A--TGTGGCGCGGCG-TTCGTGCTAAAA-CGA-AAA---GATCATTTTGTT--GA-TTTTATATTTCTTTGCGCTA-CTAG-ATCAATAA--TTTGTTT--CTT-------ATCGGT-CTCTGC-TTTGTAG-ATACATCCATTTCGTAACCAC--G-GGAATGTTAT-A---TAA-TCATGGATTCATGGTG-CATCG-TTCCG--GAAAA--TC-----A-TACCAGGAAGTA-CACATC---TC-T---TCCAA-GTGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTCTAAGGATAA-CTCA-AGTACTTTGTATTC-TATTCAAAACAAAATTTGGA-CATA-TGGATAC-GTACAAAG--A-GGG-AACATGGCC--TATTAATAT-TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATNTTAATTTAGTGG--CA---TNTG-TTTCCA-CATGTATTC-TTCAGTGAT-AAAT-GA--ATTA--T--T-TGTTTGT-A-AC-AAATTATTTATACC-TTTT-TAGACAGT--A-T-GTTA-TATGATAA--AATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATACATTTTATA-ACAAATCAT-ATATTGTAATTGATTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGGG--ACA-CAAAATGGGTTCAAAACTTTGTT-CC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATATG-GTTTCGAATCTGCAG-TAGCAATTTCACAAAAAGTTTAAATTCAGGAACTCTTGC-TAGATTGAATTTT--TTGAC--AAAATTTGACTTAAAATTTGGGTCATATTTTCCCC-ATAATG-CTGTAGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGATTTTC-AAAGAAAA-AAG-TAACTTTCAGCAAAGGGG-T-AACT-TTGAGGGGCTG-TAACT--CTTTAAAGT-CCGCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTA-TTTAAAAAGTTTAATT-CAATGAAAAAANT-TCATCTCACCAGAG-AACATCCTTAAG
Reference ( family-488 ) : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATG-TAGGAG--TTCAAGTTTTT-ATATCA-T--GT----ANACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTG-TTTGTTATT-GT-TGAA-CA--GAAACTGT--AAAAAAAAAA-TCAATCAAA-ACATGAAAATCNTTTT-CTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGTGG-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAG---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCG-TTTACAAGGCA-C-GGTG---TG-AC---A----TGTAGGCC---CATA--AACACTG--TAC-----GTA--TCA--ATG-GGTCGGAACGA-TTG-C-GAGAGG-----GCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAAG-----T--T-NCTA-T-T--------A--AAG----------TA--TTTTA-TNTTTAAAAA-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCCAA--TGATCTGATCNTG-C-G-CG--AGG--AAAGCC--T---AT---T-------CGGT------AA--TA-AT-----T----AG--TC------CCCGATGTCC-AATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGNGT-ATTN-AGTATCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTC---AT--C--AAAACGAATC----CCGAGGTAAA-TAGT---------G-----------TTAGAGAATA--TGTGGCGCGGCG-TTCGTGCTAAAA-CGA-AAA---GATCATTTTGTT--GA-TTTTATATTTCTTTGCGCTA-CTAG-ATCAATAA--TTTGTTT--CTT-------ATCGGT-CTCTGC-TTTGTAG-ATACATCCATTTCGTAACCAC--G-GGAANGTTAT-----TAA-TCATGGATTCATGGTG-CATCG-NTCCG--GGAAA--TC-----A-TACCAGGAAGTA-CACATC---TC-T---TCCAA-GTGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTCTAAGGATAA-CTCA-AGTACTTNNTNTTC-TATTCAAAACNAAATTTGGA-CATA-TGGATAC-GTACAAAG--A-GGG-AACATGGCC--TATTAATAT-TTTGGAGT-CAGAAGGTCAAAGGTC-ANTGTCACAGTGCATGGAAATTGGACAATGTTAATTTAGTGG--CG---NNTG-TTTCCACCACGTATTC-TTCAGTGAT-AAAT-GA--ATTA--T--T-TGTTTGT-A-AC-AAATTATTTATACC-TTTT-TAGACAGT--A-TAGTTA-TATGATAA--AATAAATACATAAAATTTGCAAATAT-GAATTGAAGA--AAATACA-TTTATA-ACAAATCAT-ATATTGTAATNGGNTTGAAATTTATGACAAA-ATGAGAAGGG--GGT-GGG--ACA-CAAAATGGGTTCGAAACTTTGTT-CC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATATG-GTTTCGAATCTGCAGTTGGCNATTTCACAAAAAGTTTAAATTCAGGAACTCTTGCNTANATTGAATTTTAATTGACCAAAAATCTGACNTAAAANTTNNGTCATATTCTCCCCAATAANGANTGNAGAGTAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGATTTTCGAAAGAAAA-AAG-TAACTTTCAGCAAAGGGG-T-AACT-TTGAGGGGCTG-TAACT--CTTTAAAGT-CCGCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTCAAGATGGGTTA-TTTAAAAAGTTTAATT-CAATGAAAAAAAT-TCATCTCACCAGAG-AACATCCTTAAG
gi|1 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAT-A-TTTA-TATGTCGTAAATATT-TGCA-ACTG-TAGGAT--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATAAATGTT-T-GTTTTTG-TTTGTTATT-GT-TGAA-CA--AAAACTGTAAAAAAAAAAAA-TCAATCAAA-ACATGAGAATCATTTT-CTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--AC----AG-T-CTAGGGT-ATG-TTGT-G-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-ACG--TTACAAGGCA-CAGGTGGAATGTAC---AATATTGTAGGGC---CATA--AACACTG--TAC-----ATACGTCA--ATGTGGTCGGAACGA-TTG-C-GAGAGGACGACGCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGGCCTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAAG-----G--T-GCCA-T-T--------A--AAG----------TA--TTTTA-TATTTAAAAA-----AAATCT-ACAAACTAAATA--------------TCG-AT-CCCCAAATTGATCTGATCCTG-C-G-CG--AGG--AAAGCC--T----T---T-------CGG-------AA--TA-AT-----T----AG--TC------CCTGATGTCC-AGTGCAATTATTTT-TT-AACTCATCATTTTGAATAAAAAGGGT-ATCA-AGTATCAGAGTTTTTAAAAAATC-ACCAATGTAAACAATGAATTTATTC---AT--C--AAAATGAATC----CCGAGGTAAA--AAT---------G-----------TTAGAGAATA--TGCGGCGCGGCG-TTCATGCTAAAA-CGATAAG---GATCACTTTGTT--GATTTTTATATTTCTTTGCGCTA-CTAG-ATCAA-AA--TTTGTTC--CTT-------ATCGGT--TGTGC-TTTGTAG-ATACATCCATTTTGTAACCA---G-GGAATG-TAT-----TAA-TCATGGA-TCATGGTG-CATCT-TTC----GAAAA--CC-----A-TACCAGGAAGTA-CACA-C---TC-T---TCCAA--TGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTTTAAGGATAA-CTCA-AGTACTTGTTTTTC-TATTCAAAACAAAATTTGGA-CATA-TGGAT---GTACAAAG--A-GGA-AACATGGCC--TATTATTAT-TTTGGAGT-CA-AAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATT-GACAGTTTTAATTTAGT----CA---CTTGTTTTCCACCACGTAATT-TTCAGTGAT-AAATGGA--ATTAATT--T-TGTTCAT-ATAC-AAATTATTTATACC-TTTT-TAGACAGTTGATTGGTTA-TATAATTA--GATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATA-A-TTTATA-ACAAATCATCATATTGTAATTGATGTGAAATTTATGACAAAGATG-GAAGGG--GGT-GGG--ACA--AAAATGGGTTCAAAACTTTGTTCCC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-C-AAATGAGCAAAAATATG-ATTTCAAATCTACAG-TAGCAATTTCAC-AAAAGTTT-AATTCAGAAACTCTTGC-TAGATTGGATTTT--TTGAC---AAATTTGACTTAAAATTTGGGTCATATTTTCCCC-ATAATG-CTATA---TAATCTGTTATTA---TCTAGAATTTTTGAAAAAAAATTATG-AAAAGTTAT-AAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTA-TGTCATGAA-TATTTGTTTTATA-TT-G-TGTTTTC-TTGTGGAAAATGGTAAGTTTTAAAAGAAAA-AAG-TAACTTTCAGCAAAGGGG-T-AACT-TTCAGGGGCTG-TAACT--CTTTAAGGT-CCGCACT-AACATAC--TTTTTC-TTGTGTTTGAATTTGCCGTTCTGGTCAAGATGAATGAGTTTAAAATGGGTTA-TTCAAAAAGTTTAATT-CAA-GAAAAAAA---------ACCAGAG-AACATCCTTAAG
gi|10 : TTATTAT-TTCTAGAATTTTTG-AAAAAAATTCTGTGAAAGTTATAAAA--ATTATAAAT-TATGATTAATNGTGATTAATTTTCATGAAATAAAAGATGATGA--ATATTATTC-TGTCATGAAATATTTGTTTTATA-TTTG-TG-TTTC-TTGTGGAAAATGGTGATTTTC---AGAAAA-AAG-TAACTTTCAGCAAAGAGG-TAAACT-TTGAGGGGCTG-TAACTTCTTTTAAAGT-CGCCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTATTTTAAAAAGTTAAATT-CAATGAAAAAAATGTCATCTCACCAGAGAAACATCATTAAG
gi|11 : A--------------TCT-AT-ATACAA--T---CTGATCTTG-CCG-CGC-ATGT-CAAGCC--T---AG---T-------CAGTTAGCCTAAGGTA-ATA----T----AG--TC------CCCGATGTCC-AATG----CATTTT-TT-AA-tttcatcgttattttgttatattttcag
gi|11 : tatcTAGATAA-A--TTTAGCGCAGAT-TTCGTCCTAAAA-CAA-AAAAGAGATCATTTTGTT--GA-aatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttctcccatatagataaatttagcgcagatttcgtcctaaaacaaaaaagagatcattttgttga
gi|12 : tatcatctatatacaatctgatcttgccgcgcatgtcaagcctagtcagttagcctaaggtaatatagtccccgatgtccaatgcattttttaaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttctcccataGGCA-C-AAT-------AC--------TGTACATC---CATAT-GACACGG--TGC-----GTA---CA--ATG-GGTCG-AACGA-TTGTC-GAGAGG------CGT--GAATAGG--AGAAT---TATA-GCA-A-CGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAAG-----T--TGTCTATT-T--------T--AAG----------TA--TTTTA-TTTTTAAAAATCTACAAACTT-AGAAACTAAATA--------------TC--------------GATCTGATCCTGCC-G-CGC-AGG--AAAGCG--T---AT---T-------------------------------------------------CCAATGCCC-AATGC-ATAATTTT-TT-AA-TCATCATTTTGAATAAAAAG
gi|13 : tT--ATT-TTCTCACAAG--T--GAAT-GGGCACGAAGA-G---AA-TAA--A--CAG--ACCA-CT-CAGCAG--C-ACAA----TCAC-GCG-TTTACAA-GTA-C----G---TG-AC---A----TGTAGGCC---TATAC-AACACTACCTACA----AAA--TTACTATG-GGTC-GAACGATTTG-C--CGAAG-----GCGT---AATGGAGCAGACTGGATATA-ACA-CACATA-GT-G---TTAA-CC-ACAGG-C-------------TACTGAATGAAT---TCT-GTAAG-----T--T-TTTT-T-T--------CT-AAG----------TG--TT
gi|14 : tttgaatccatgtAAATTTGGA-CATA-TGGATAC-GCACAAAG--A-GGGAAACAT-GCC--TATTAATATNNNNNNNNN-NNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--NN---NNNN-NNNNNNNNNNNNNNNN-NNNNNNNNN-NNNN-NN--NNNN--N--N-NNNNNNN-N-NN-NNATTATTTATACC-TTTT-TAGACAGT--A-T-GTTA-Tatgagaagtaattgtctaaacaatc
gi|15 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAT-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATA-TGGGAG--TTCAAGTTTCT-ATATCA-T--GTATACATACGCAAAG-TAA---TACATTAATGTG-T-GTTTTTA-TTTGTTATT-GT-TGAA-CA--GAAACTGT--AAAAAgnnnnnnnnnnnnnnnnnnnnnnnnnatat
gi|16 : TTTGAAAGAAAA-AAACTA--TTTCAGCAAAAGGG-A-AACT-TTGAGGGGCTG-TA-TT--GTTTAGAGT-CCACACT-AACACAC--CCTTTTTTAGTGTTTAGA-TTGCCTTTCTAATCGAGATGAATCTGC-CGAAATCGATTA--TTAAA
gi|17 : --GGT-GGACAACA-TGAAAAAGGTTCGAA-CTGTGTT-CC-AATGCACACTACCTCTAACATTTTT-TTCATT-CAAAATTAGC-AAAA-ATGTGATTCAAATTTACAG-TAACTATTTCAAAACAActagaagagaacacccttaacata
gi|18 : tG-TAGGAG--TTCAAGTTTTT-ATATCA-T--AT----ATATGCAAAA-TAG---TACATTAATGTT-T-ATTTTTG-TTTGTTACT-AT-TGAA-CA--GAAACTGT----AAAAAAAA-TCAATCA
gi|19 : AATGGG--GGAAT---TATA-GCA-A-CGTA-GG-AGC-TGAC-CC-CAGGG-CTGCTAA----AG-TATTGGGTGAAT---T-G-GTAAG-----T--T-TTTT-T-T--------A--ATG----------TA--
gi|2 : TCA-T--GT----AAACGCAAAA-TAG---TACATTTATGTT-T-GTTTT-G-TTTGTTATT-GT-TGAAACA---AAACTGT--AAAAAA-----TCAATCAAA-ACATGAAAATCTTTTA-CTTTTGCTCTCATTCTACTACG-CATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGT-G-AAGCAGACATGGACATTTC-GTCAGAAATTTGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA--A-GAAGAAA---AA-TAA-TA--CAG--ACTAGTTGCAGCAG-GC-ACAA----TCAC-GCG-T-----AAGCA-C-G--G---TG-AC---A----TGTA-------CAT---GACACTGT-TAC-----GTA--ACA--ATG-GGTC-GAACGA-TTGCC-GAGA-G-----ACGT--GAATGGG--AGAA----TATA-GCA-ATTATA-GT-GGCTTGAA--C-CAAGG-CTGTTGAT-ATAG-GTTTGAGTGAATTTGT-T-GTAAG-----T--T-GTTT-C-T--------AATAAG----------TATTTTTTA-TTTTT---AA-----AAATCT-A-AAAC-AAATA--------------TCG-AT-ACCCA-----ATCTGATCATGCC-G-CGGCAGG--AAAGCCGGTA--AT---TAGA----CGG--------G--TA-AT-----T----AGATTCTATAGTCCTGATGTC---ATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGGGTAATGT-AGTATCAGAGTTTTT-AAAAATCAACCAACGTAAAACATGAATTTATTC---AT--TCAAAAACGAAT-----CCGAGGTAAA-TAGT---------ATATATTCGCATTTAGAGAA-A--TAAGGCGCGGCG-TTCGTGCTAAAA-C-A-AAA---GATCATTTTGTT--G--TTTTATATTTC-TTG-GCTA-CTAG-AACAATGATTTTTGTTTAGCTTAACCCAGATCAGT-CTCTAG-TTTGTAATCTCCATTCATTGCGT-ACC-C--G-GTGAAGTTATTA---TAA-TC-TGG-TT----ATG-CCTCGATTCCGTAGCAAACTTCCTTTGA-TACCAGGAAGTA--ACATTGGATC-TACGTCCAAGGTGGCCTCATCCGGAATAAGACACATTCATGTTGGAAGTGCTG-TAAC--AATTTAGGTTTCTAAGG-CAA-CTC--AGTACTTTGTATTC-TATTCAAACAAAAATTT-GA-CATA-TGGATACGGCACAAAGAAA-GGG-AACAATGCCTGTATAAATAT-TTTGGAGTCCAGAAGGTCAAAGGTCGAATGTCACAGTGCATGGAAATTGGACAATGTTAATTTAGTTGATCGCATACTG-TTTCCA-CATAAATTCTTTCAGTGAT-AAAT-GGGCATTA-----T-TGTTTGT-A-ACAAAATTATTTATACC-TTTT-TAGAAA----A-TAGTTA-TATGATAA--AAT-AATACATAAAA-TTG-AAATATGGAATTGAAGGACAAATACATTTTATA-ACAATTCAT-ATATGGTAATGAGTTTGAAATTTATGACAAA-ATGAGAAGGGTTGGTGGGG--ACACCAAAATGGTTTCAAAACTTTGTT-CCAAATGCACACTACCCCCAAC-TTTTTATTCATTAAAAAATGA-C-AAAATATG-GTTTCGAATCTGCAATTGGCAA-TTCACAAAAAGTTTAAATTCAGGA--TCTTGCCTATATTGAATTTTAATTGACC-AAAATTTGACATAAAAATTTGGTC--ATTTTCCCC-ATAAGGAATGTAGAGTAATCTGTTA-TATATTCTAG-ATTTTTGTGAAAAAATTATCTAAAATTTCTAAAGACATT-TAAATCCATTATTAAT----------TTTCATGAAATAAAAGATAATGAAGA-ATTATTCATGTCCAGAA-TATTTGTTTT-TATTT-GCTG-TTTTGCTGTGGAAAATGGTGATTTTC--AAGAAAACAAG-TAA-TTTCGACAAAGGGGTT-AATTCTTGGAGGGCTGTTAACT--CT---AAGTCCCGCACTAAACATACCTTTTTTCTTTGTG-TTGAA--TGCCTTTCT-GTCAAGATGAATGAG-TTAAG--GGG-TA-TTT-AAAAGTTTAATTCCAATGGAAAAATT-TCATcagagcagttgtcta
gi|20 : TTC-TATT-AAAACCAATTTTG----ATA-TAGATGC-GTACAAAA--ATGGG-AATATG-CC--TATCGAC---TTTGGGGC-CAGAAGGTCAAAAGTC-ATTGTCACAGTGC
gi|21 : -GCATTTT-ATCATTCTCACAAGGGT--GAGT-GA-CA-GAAGAAG---AA-TGATTA--CAG--AC------CAGCAA-GC-ACAAGATTTCGC-GGG-T-----AAGCACC-GGTG---TC-AT---A----CGT
gi|22 : CTGGTGGT-GATTTTT---ACC--G-CAGAGTGAGAT-C--T--ATAT-T-TTT--TATGTCGTAA-TATG-GGCA-AATG-TAGGAGTTTTC-AGTTTTT-
gi|23 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACA--G-C-GAGTTAG-T-T--TCCATA
gi|3 : taaT--ATTATTCTCACAAG--T--GAAT-GG-CA-GAAGGAG---AA-TAA-TA--CAG--ACCAGCT-CAGCAG-GC-ACAA----TCAC-GCG-TTTACAAG-TA-C-GGTG------AC---A----TGTAGGCC---TATAC-AACACTACCTACAAAATGTA---CT--ATG-GGTCG-AACGA-TTG-CCGAGAGG------CGT--GAATGGG--AGAAT---TATA-TAACAGCATA-GT-GGC-TGAA-CC-CAAGG-CT-------------ACTGAATGAAT---T-T-GTAAG-----T--T-TTTT-T-TTAATGTAGA--GAG----------TA--ATT----GTCTAAAAC-----AA-TCT-ACAAACTAAATA--------------TCG-AT-ACCCAA--T---CTGGTCATG-CCA-CGC-AGG--AAAGCC--T---AT---T-------CGGT------AAC-TATAT-----TCTATAG--TC------CCTGATGTCC-AATAC-ATCATTTA-TG-AA-TTATTATTTTGAATAAAAAGTGT-AATATAGTATCAGAATTTTT-AAAA-TC-ACCAACGTAAGCAATGAATTTATTC---AA--C--AAAAAGAATC----CCGAGGTAAAATAGTTTATC----GCAT--------TTAGAGAA-A--TGTGGCGCGGCG-TTCATGCTAAAA-CGA-AAG---G-TCATTTTGTTTTAA-TTACATGTTTCTATGTGGTA-CTAG-ATCAATAA--TTTGTTT--CGG-------ATCTGT--TCTGT-TTTGTAG-ATACATCCATTTTGTAACCAC--ATGGAATGTTAT-----AAA-TCATGGATTCATGGTGCCATC--ATTCG--GGAAA--TC-----A-TACCAGGAAGTA-CGCATC---TC-T---TCGAA-GTGGGTACAT--GGAA--------------GTTG-A----CTGTTAAAATAATG--GGTTT-TAAGGAAAA-CTCA-AGTAGTTTGTATTC-TATTC-AAACCAAATTTGGA-TACA-TGGATAC-GTATAAAGA-A-GGG-AACAT-GTA--TATTA--GT-TTTGGAGT-CAGAAGGTCAAAGGAA-ATTGTCACAGTGCA-------TGGACAATATTGATTTCGTGG--CA---TATG-TTTCCA-CATGTATTT-TTCAGTGAT--AAT-TC--ATTA--TTAT-TGTTTGT-GTAC-TACTTATTTCTACT-TTTT-TAGACAGT--A-T-GTTA-TATGATAA--AATAAATAC--AAAATTTGCAAATAT-AAATTGAAGA--ATATGCATTTTATA-ACAAATCAT-ATATTGT
gi|4 : atgtA--ATG-GGC--GAACGA-TTC-C-GAGAGG------CGC--GAA---G--GCAAT---TA--------ATGT------GC-TCTA-C------G-TTGCTGATGATAG-TACTGAGTGAAT---T-TTATAAAGGTTTT--T-TTTA-TGT--------A--CAGATCAATTGTCTA--TTTTAACATACAAATA-----AAATCC-ACAAACTAAGTAAAGTTACTGGGTTATCGTATTACCCAA--TTAT--GATCTTG-C-CTCT--AGGTCAATACC--TTAGATAGCTGCAGGAGCG--------AA--TA-TC-----T----CG--TTA-----CCCGATGTCC-AATGC-TTTAGTTTATTGAA-TTATCACTTTGAATAGAAAATGA-AATT-ATTAACATAGTTTTT-AAATATC-ACGAACGAAAACAATGAATCAATTCCCGATGGT--AAAATAAATCTTCTCC---------CAGT---------------------TTAGAGAA-AGTTATGGCGCGGCGTTTCGTGCTGAAACCG---AA---TATCATTTTGTT--GA----TATATTCCTTTGCTCTAGATAGTATCAATGT--ATTGTTT--CTTG------ATCGGTCCTCCGCTTTTGTAT-ATACATTC-TTTGATAACCACATG-GAAAGGTTA------TAA--CATGGATTACTAGTGTCATCA-GTC----GAAAA--TC-----ATTACCAGGAAGTACCACATC---TCGT---TCCTT-GTGGGTGCAT--GGAA--------------GTTGAC----TTGTTAAA------------------GATAATCTCAGAGTACTTTGTATTCGTATTNNNNNNNNNNNNNNNN-NNNN-NNNNNNN-NNNNNNNN--N-NNN-NNNNNNNNN--NNNNNNNNN-NNNNNNNN-NNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTT----TAG-GG--GA---TATG-TTTACA-CATGTATTC-TTCAGTTAT-AAAT-AA--ATTA-----T-TGTTT----------ATTATTTAT-CC-TTCTATAGACAAT--A-T-GTTAGTATGATAA--tgt
gi|5 : aagtgt-AA-TCATCATTTTGAATAAAAAG-GT-ATTT-AGT-TCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTC---AT--C--AAAATGA-TC----CCGAGGTAAA-TAGTTTATATATCGCAT--------TTAGAGAATA--TG--GCGCGGCG-TTCGTGCTAAA--CGA-A-----GATCATTTTGTT--GA-TTTTATATTT--TTGCGCTA-CTAG-ATCAATAAA-TTTGTTT--CTT-------ATCG---TTCTGC-TTTGTAG-ATACATCCATTT-GTAACCAC--A-GGAATGTTATAAATCTAAATCATGGATTCATGGTC-CATCA-TTCCG--G-AAA--TC-----A-TAC-AGGAAGTA-CACATC---TC-T---TCCAA-GTGGTTGCAT--GGAA--------------GTTGA-----CTGTTAAA--A-TT--GGTTTCTAGAGATAA-CTCA-AGTACTTTGTATTC-TATTCAAA-CAAAATTTGGAACATAATGGATAC--TACAAA---A-GGG-AA-ATG--C--TATTAATAT-TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATGTT-ATTTAGTGG--CA---TTTG-TTTCCA-CATGTATTC-TTCAGTAATAAAAT-GA--ATTA--T--TATGTTTGTAA-AC-AAATTA-TTATACCTTTTT-TAGACAGT--A-T-GTTA-TATGATTATTAATAAATACATAAAATTTGTAAATAT-GAATTG-AGA--AAATACA-TTT-TATACAAATCAT-ATATTGT-ATTGAGTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGGG--ACA-CAAAAT-GGTTCAAAACTTTATT-CC-AATGCACA-TA--CCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATAT--GTTTCGAATCTGCAta
gi|6 : GGGTGT-ACTCTGGTGGC-GATTTTTTACACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTAATATGTCGTAAATATG-GGCA-AATG-TAG-AG--TTCAAGTTTTT-ATATCA-T--GTC---ATACGCAAA--TAG---TACATTAATGTT-T-GTTTT-G-TTT-TTATTAGA-TGAA-CA--GAAACTGT--ACAAAA-----TCAATCAAA-ACATGAAAAATTTTTCACTTTTGCTCTCATTCTAC----TCATAC--AATGATGAC-TATAC-AAATG--TAAACAA---ACTCA-CGACT-GAAC--TTGGA-TG--TAC-TC-GC-CA--AACATTTC--ACATTTAG-T-CTAGGGTTATA-TTGGGG-AAGCAGACATGGATTTTTCCGTCAGAAATTAGGCT-GCATCT--ATT-TTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACTAGTTGCAGC-G-GC-ACAA----TC-C-GCG-TTTGCAAGCCA-A-CGTGA--TGTAC--------TGTAGGCCA--TACA--AACACTG--TAC-----GTA---CA--ATG----------GA-TGC-C-GAGA-G-----ACGT--GAATGGG--AGAAT---TATA-GC---ACGTA-GTGGGC-TGAAGCC-CAAGG-ATGTTGAT-ATAGTTTCTGAGTGAAT---T-TGGTAAG-----T--TGTCTA-T-T-----------AAG----------TAT-TTTTA-TTTT---AAA-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCCA-----ATCTGATCATG-C-G-CGCAAGG--AAAGCC-------------------CGGT------AAATTAGATTTCTAT----AG--TC------CCTGATGTCCTAATGC-A
gi|7 : gaatttaGGTGTCACTCTGGTGGTAGATTTTT---ACCACG-C-GAGTGAG-T-CACTCCATAC-TATTTA-TTTGTCGTAAATATGCGGCACGATGGTAGGAG--TTCAACTTTTTTAT-TCAGTAAGT----AGACGCAAAAATAAGTTTACATTA-TGTT-T-GTTTTTGTTTTGTTATT-GTATGAA-CA--GAAACTCT-----AAAAAAA-TCAATCAAACACATGAAAATCATTTT-ACTTAGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCGACG-CT-GAAC---TGGAATG--TACTTC-GCACAAAAACATTTCAAACATTTAGAT-CTAGGGT-ATATTTGTGA-AAGCAGACATGGACATTTCGGTCAGAAATTA-GCTGGCATCTAAATTTTGCTCAC-AG--T--GAGTGGA-CA-GAAGGAATATAA-TAA-TACTCAGGCACCAGCTGCAGCAGCGCAACAA----TCAC-GCGTTTTACAA-ACA-C-TCCG---TG-ACAAAA----TGTAGGTCCCGCATA--CAAACTG--TAC-----GTA---CA--ATA-GGTCG--ACGA-TTGCC-GAAGAC-----GCGTAGAAATGGGC-AGAAT---TCTA-GGC-AACGTACGT-GGC-TGAA-CCGCAAGG-CTGTTGAT-ATAG-TTCTGAGTGAAT---T-T-GTAAG-----TTGT-TCTA-T-T--------T--AAG----------TA--TTTTA-TTTTT--TAA-----AAATCTAACAAAATAAATA--------------TCG-AT-
gi|8 : agtCTCTGGTGGT-GATTTTTT--ACA--GGC-GAGTGAG-TTC--TCCATACCT-TTTA-TTTGTCGTAA-TATG-GGCA-AATG-TAGGAG--TTCAACTTTTT-ATATCA-T--GT----ACACGCAAAA-TAG---TACATTAATGTTATAGTTTTTG-TTTGTTA-T-GT-TGAA-CAAGAAAACTCT--AAAAAAAAAATTCAA-CAAA-ACATGAAAATCTTTTTACTTTTGCTCTCA-TCTAC---GTCATACAAAATGATGACGTAT-CAAAATGCTTAAACAAGGGACGCG-CG-CTAGAACTTTTTGAATGTTTAC-TCAGC-CACTAACA-TTC--ACA-TTAG-TCCTAGGGT-ATA-TTGTGACCAGCAG-CATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATATTTCTCACAAG--TTGAAGT-GACCA-GAAGAAA---AATTAA-TA--CAG--ACCACTTGCAGCAG-GC-ACAA----TCACGGCGTTTTACAA-ACA-C---TG---TG-AC---A----TGTAGGCC---CATGACAACACTG--TAC-----GTA---CA--ATG-GGTC-GAACGATTTGCC-GAGA-G-----ACGTG-GAATGGG--AGAAT---TCTATGCA-AGCGTA-GT-GGC-T
gi|9 : ATTTCACAAAAAGTTTAA-TTCAGGAACTCTTG-ATAGATTGAATTTT--TTGAC--AAAATCTGACTTAAAATTTGTGTCAT-TTCTCCCCAATAATG-CT--AGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAGAT-TAGGATTAAT----------TTTCATGAAATAACAGATAATGA--AGATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGATTTTC--AAGAAAA--AG-TAACTTTCAGCAAAGGGG-T-AACT-TTGAGGGGCTG-TAACT--CTTTAAAGT-CCGCACT-AACATAC--CTTTTTCTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGTTC-AGATAGGTTA-TTCAAAAAGTTTAATT-CAATGAAAAAATT-TCATTTCACCAGAG-AACATCCTTAA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 1111 111 11111 11111 11 11 111 111 11 11 111 1 11 1 1111 111 11 333333333333333333333 111 22 11 1111111111 22 22222222 11 44444444444444 11 33333333333333333 22222222222222 2222222 111 11 222222222222222222222222222222222222222222222222222222222222 11 55555555555555555555 1111 22222 11 11 3333333 22 1 111111 222222 1 11 2222 111 22222 111 111 11 44444444444444 222222 22222222 111 111111 111111 11111 22222 1111111 11 1 11 1 1 11 1 11 1 1 1 1 1 1 11 1 1 11 1 111 1 222222222 11 2 11 1 4444444444 2222 1 1 1 1 1 1 1 1 11 11 1 1 111 1
lowQualScore : 8 5 555 77 5 5 5 5 77 888 6 7 6 6 5 77 5 5 77 7777 0 55 000 5 5 5 5 0 5 5 5 999 77 55555 8 1 44 0 0 44444 11 8 8 11 444 8 8 8 111 0 11 8 8 8 66 0 11 66 8 8 8 8 444 0 6 6 11 9 66 66 5 0 5 888 5 5 66 66 0 2 5 5 5 0000 5 000 22 4 222222222222222222222 0 333 11 88 4444444444 4 777 4 11 8 66666666 00 99 777 4 9999 4 4 4 4 4 4 66 4 777 4 8 66 66 8 55 22222222222222 66 00 66 11111111111111111 5 0 99999999999999 5 5 9999999 1 222 5 5 33 555555555555555555555555555555555555555555555555555555555555 5 5 6 5 5 8 8 888 0 8 0 8 0 1 11 5 8 11111111111111111111 5555 2 6 77 6 33333 99 6 11 5 3 8 8 0 99 11 4444444 11 8 8 0 1 0 666666 8 5 0 8 888888 88 0 11 55 6 22 1111 111 00000 8 8 0 444 8 444 8 11 77777777777777 666666 0 44444444 8 0 8 88 6 11 4 0 5 5 1 5 444 5 5 1 555555 3 1 77 5 0 5 1 2 2 1 88 999999 77 6 6 6 77 33333 77777 6 2 9999999 6 6 99 99 6 1 11 3 3 3 7 0 3 33 2 3 3 0 7 3 7 33 2 0 66 6 3 0 0 2 2 0 0 0 3 2 0 3 22 3 3 3 7 7 7 3 88 3 7 333 3 333333333 3 33 3 0 3 3 33 3 0 3333333333 4444 0 0 3 0 0 0 0 0 0 555 8 55 8 8 8 8 0 11 0 8 8 11 3 0 88 3 3 44 0 88 0 0 3 444 3 3
lowQualScore : . . ... .. . . . . .. ... . . . . . .. . . .. .... . .. ... . . . . . . . . ... .. ..... . . .. . . ..... .. . . .. ... . . . ... . .. . . . .. . .. .. . . . . ... . . . .. . .. .. . . . ... . . .. .. . . . . . .... . ... .. . ..................... . ... .. .. .......... . ... . .. . ........ .. .. ... . .... . . . . . . .. . ... . . .. .. . .. .............. .. .. .. ................. . . .............. . . ....... . ... . . .. ............................................................ . . . . . . . ... . . . . . . .. . . .................... .... . . .. . ..... .. . .. . . . . . .. .. ....... .. . . . . . ...... . . . . ...... .. . .. .. . .. .... ... ..... . . . ... . ... . .. .............. ...... . ........ . . . .. . .. . . . . . . ... . . . ...... . . .. . . . . . . . .. ...... .. . . . .. ..... ..... . . ....... . . .. .. . . .. . . . . . . .. . . . . . . . .. . . .. . . . . . . . . . . . . . .. . . . . . . . .. . . ... . ......... . .. . . . . .. . . .......... .... . . . . . . . . . ... . .. . . . . . .. . . . .. . . .. . . .. . .. . . . ... . .
lowQualScore : 0 7 777 99 7 7 7 7 99 777 7 3 7 7 7 99 7 7 99 9999 3 99 000 7 7 0 7 1 7 7 7 666 99 00000 0 4 66 8 8 88888 00 0 0 00 000 0 0 0 888 8 00 0 0 0 00 8 00 44 0 0 0 0 444 8 0 7 99 8 99 99 0 0 0 888 0 0 99 99 2 5 6 0 0 6666 0 444 11 4 666666666666666666666 2 888 99 88 1111111111 4 888 4 77 9 11111111 66 55 000 0 3333 0 0 0 4 4 4 22 4 888 4 9 11 11 9 44 77777777777777 11 66 99 66666666666666666 7 7 44444444444444 0 0 7777777 0 999 7 7 66 000000000000000000000000000000000000000000000000000000000000 7 7 7 7 7 8 0 222 8 0 8 0 8 0 00 6 0 99999999999999999999 0000 2 7 77 7 00000 22 7 88 6 2 0 0 8 00 00 0000000 22 0 0 8 4 8 222222 0 6 8 0 444444 88 8 66 66 0 66 0000 888 00000 0 0 8 000 0 000 0 00 00000000000000 444444 8 88888888 2 8 0 88 7 00 8 7 7 7 6 7 666 7 7 0 777777 1 6 99 7 3 7 3 5 0 0 22 333333 77 7 7 7 55 77777 33333 7 8 5555555 7 7 22 22 7 4 00 2 2 2 0 0 2 88 5 2 2 0 3 3 3 88 5 0 55 5 2 0 0 5 5 0 0 0 2 5 0 2 55 3 2 2 3 3 3 3 33 3 3 777 3 777777777 2 22 2 0 2 2 88 2 0 8888888888 8888 0 0 2 0 0 0 0 0 0 888 0 88 0 0 0 0 8 00 8 0 0 00 8 8 88 2 2 00 8 88 8 0 2 222 7 3
consensus : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATG-TAGGAG--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAA-CA--GAAACTGT--AAAAAAAAAA-TCAATCAAA-ACATGAAAATCTTTTTACTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGTGG-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCG-TTTACAAGGCA-C-GGTG---TG-AC---A----TGTAGGCC---CATA--AACACTG--TAC-----G----T-A---CAATG-GGTCGGAACGA-TTGCCGAGAGG-----GCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--T-TCT-TTT--------A-----AAGT--A--TT--TTATTTT----TA-AAA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-AAT--ATCTGATCNTG-C-GC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AA--TA-AT-----T----AG--TC------CCCGATGTCC-AATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGNGT-ATT-TAGTATCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAAATAG--TTTATAT---GC--ATTTAGAGAA-A--TATGGCGCGGCGTT-CGTGCTAAAAC-GA-AA---GGATCATTTTGTT--GA-TTTTATATTTCTTTGCGCTAC-TAG-ATCAATAA--TTTGTTT--CTT-------ATCGGTC-TCTGCTTT-GTAG-ATACATCCATTTCGTAACCAC--G-G-GAATGTTA-TA----TAA-TCATGGATTCATGGTG-CATCA-TTCCG--GAAAA--TC-----AT-ACCAGGAAGTAC-ACATC---TC-T---TCCAA-GTGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTCTAAGGATAA-CTCA-AGTACTTTGTATTC-TATTCAAAACAAAATTTGGA-CATA-TGGATAC-GTACAAAG--A-GGG-AACATGGCC--TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATNTTAATTTAG-TG---GCAT-NTG-TTTCCA-CATGTATTC-TTCAGTGAT-AAAT-GA--ATTA--T--T-TGTTTGT-A-AC-AAATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATACATTTTATAACAAATCAT-ATATTGTAATTGATTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAATGGGTTCAAAACTTTGTT-CC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATATG-GTTTCGAATCTGCAG-TAGCAATTTCACAAAAAGTTTAAATTCAGGAACTCTTG-CTAGATTGAATTTT--TTGA-CAAAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTGTAGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCAAGGAAAAAAG-TAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTA-TTTAAAAAGTTTAATT-CAATGAAAAAANT-TCATCTCACCAGAG-AACATCCTTAAG
Reference ( family-488 ) : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATG-TAGGAG--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAA-CA--GAAACTGT--AAAAAAAAAA-TCAATCAAA-ACATGAAAATCTTTTTACTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGTGG-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCG-TTTACAAGGCA-C-GGTG---TG-AC---A----TGTAGGCC---CATA--AACACTG--TAC-----G----T-A---CAATG-GGTCGGAACGA-TTGCCGAGAGG-----GCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--T-TCT-NTT--------A-----AAGT--A--TT--TTATTTT----TA-AAA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-AAT--ATCTGATCNTG-C-GC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AA--TA-AT-----T----AG--TC------CCCGATGTCC-AATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGNGT-ATT-TAGTATCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAA-TAG--TTTAT-----GC--ATTTAGAGAA-A--TGTGGCGCGGCGTT-CGTGCTAAAAC-GA-AA---AGATCATTTTGTT--GA-TTTTATATTTCTTTGCGCTAC-TAG-ATCAATAA--TTTGTTT--CTT-------ATCGGTC-TCTGCTTT-GTAG-ATACATCCATTTCGTAACCAC--G-G-GAATGTTA-TA----TAA-TCATGGATTCATGGTG-CATCG-TTCCG--GAAAA--TC-----AT-ACCAGGAAGTAC-ACATC---TC-T---TCCAA-GTGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTCTAAGGATAA-CTCA-AGTACTTTGTATTC-TATTCAAAACAAAATTTGGA-CATA-TGGATAC-GTACAAAG--A-GGG-AACATGGCC--TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATNTTAATTTAG-TG---GCAT-NTG-TTTCCA-CATGTATTC-TTCAGTGAT-AAAT-GA--ATTA--T--T-TGTTTGT-A-AC-AAATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATACATTTTATAACAAATCAT-ATATTGTAATTGATTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAATGGGTTCAAAACTTTGTT-CC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATATG-GTTTCGAATCTGCAG-TAGCAATTTCACAAAAAGTTTAAATTCAGGAACTCTTG-CTAGATTGAATTTT--TTGA-CAAAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTGTAGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCAAAGAAAAAAG-TAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTA-TTTAAAAAGTTTAATT-CAATGAAAAAANT-TCATCTCACCAGAG-AACATCCTTAAG
gi|1 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAT-A-TTTA-TATGTCGTAAATATT-TGCA-ACTG-TAGGAT--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATAAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAA-CA--AAAACTGTAAAAAAAAAAAA-TCAATCAAA-ACATGAGAATCATTTT-CTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--AC----AG-T-CTAGGGT-ATG-TTGT-G-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-ACG--TTACAAGGCA-CAGGTGGAATGTAC---AATATTGTAGGGC---CATA--AACACTG--TAC-----A----T-ACGTCAATGTGGTCGGAACGA-TTG-CGAGAGGACGACGCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGGCCTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GG--T-GCC-ATT--------A-----AAGT--A--TT--TTATATT----TA-AAA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-CCCCAAATTGATCTGATCCTG-C-GC-G--AGG--AAAGCC--T----T---T-------CGG-------AA--TA-AT-----T----AG--TC------CCTGATGTCC-AGTGCAATTATTTT-TT-AACTCATCATTTTGAATAAAAAGGGT-ATC-AAGTATCAGAGTTTTTAAAAAATC-ACCAATGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAA--A------AT-----G-----TTAGAGAATA--TGCGGCGCGGCGTT-CATGCTAAAAC-GATAA---GGATCACTTTGTT--GATTTTTATATTTCTTTGCGCTAC-TAG-ATCAA-AA--TTTGTTC--CTT-------ATCGGT--TGTGCTTT-GTAG-ATACATCCATTTTGTAACCA---G-G-GAATG-TA-T-----TAA-TCATGGA-TCATGGTG-CATCT-TTC----GAAAA--CC-----AT-ACCAGGAAGTAC-ACA-C---TC-T---TCCAA--TGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTTTAAGGATAA-CTCA-AGTACTTGTTTTTC-TATTCAAAACAAAATTTGGA-CATA-TGGAT---GTACAAAG--A-GGA-AACATGGCC--TATTATTAT--TTTGGAGT-CA-AAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATT-GACAGTTTTAATTTAG-T-----CAC-TTGTTTTCCACCACGTAATT-TTCAGTGAT-AAATGGA--ATTAATT--T-TGTTCAT-ATAC-AAATTATTTATACC-TTTT-TAGACAGTTGATTGGTTA-TATAATTA--GATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATA-A-TTTATAACAAATCATCATATTGTAATTGATGTGAAATTTATGACAAAGATG-GAAGGG--GGT-GG-GACA--AAAATGGGTTCAAAACTTTGTTCCC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-C-AAATGAGCAAAAATATG-ATTTCAAATCTACAG-TAGCAATTTCAC-AAAAGTTT-AATTCAGAAACTCTTG-CTAGATTGGATTTT--TTGA-C-AAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTAT--A-TAATCTGTTATTA---TCTAGAATTTTTGAAAAAAAATTATG-AAAAGTTAT-AAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTA-TGTCATGAA-TATTTGTTTTATA-TT-G-TGTTTTC-TTGTGGAAAATGGTAAGTTTTAAAAGAAAAAAG-TAACTTTCAGCAAAGGGG-TAA-CT-TTCAGGGGCTG-TAACTC--TTTAAGGT-CCGCACT-AACATAC--TTTTTC-TTGTGTTTGAATTTGCCGTTCTGGTCAAGATGAATGAGTTTAAAATGGGTTA-TTCAAAAAGTTTAATT-CAA-GAAAAAAA---------ACCAGAG-AACATCCTTAAG
gi|10 : TTATTAT-TTCTAGAATTTTTG-AAAAAAATTCTGTGAAAGTTATAAAA--ATTATAAAT-TATGATTAATNGTGATTAATTTTCATGAAATAAAAGATGATGA--ATATTATTC-TGTCATGAAATATTTGTTTTATA-TTTG-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCA--GAAAAAAG-TAACTTTCAGCAAAGAGG-TAAACT-TTGAGGGGCTG-TAACTTCTTTTAAAGT-CGCCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTATTTTAAAAAGTTAAATT-CAATGAAAAAAATGTCATCTCACCAGAGAAACATCATTAAG
gi|11 : A--------------TCT-AT-ATAC-AAT----CTGATCTTG-CCGC-GC-ATGT-CAAGCC--T---AG---T-------CAGTTAGCCTAAGGTA-ATA----T----AG--TC------CCCGATGTCC-AATG----CATTTT-TT-AA-tttcatcgttattttgttatattttcag
gi|11 : tatcC--ATATAGATAA-A--TTTAGCGCAGATTT-CGTCCTAAAAC-AA-AAAAGAGATCATTTTGTT--GA-aatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttctcccatatagataaatttagcgcagatttcgtcctaaaacaaaaaagagatcattttgttga
gi|12 : tatcatctatatacaatctgatcttgccgcgcatgtcaagcctagtcagttagcctaaggtaatatagtccccgatgtccaatgcattttttaaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttctccGGCA-C-AAT-------AC--------TGTACATC---CATAT-GACACGG--TGC-----G----T-A---CAATG-GGTCG-AACGA-TTGTCGAGAGG------CGT--GAATAGG--AGAAT---TATA-GCA-A-CGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--TGTCTATTT--------T-----AAGT--A--TT--TTATTTT----TA-AAA-ATCTACAAACTT-AGAAACTAAATA--------------TCG--------------ATCTGATCCTGCC-GC-GC-AGG--AAAGCG--T---AT---T-------------------------------------------------CCAATGCCC-AATGC-ATAATTTT-TT-AA-TCATCATTTTGAATAAAAAG
gi|13 : tT--ATT-TTCTCACAAG--T--GAAT-GGGCACGAAGAGA---A--TAA--A--CAG--ACCA-CT-CAGCAG--C-ACAA----TCAC-GCG-TTTACAA-GTA-C----G---TG-AC---A----TGTAGGCC---TATAC-AACACTACCTAC-----AAAATT-A---CTATG-GGTC-GAACGATTTGCC--GAAG-----GCGT---AATGGAGCAGACTGGATATA-ACA-CACATA-GT-G---TTAA-CC-ACAGG-C-------------TACTGAATGAAT---TCT-GTAA--GT--T-TTT-TTT--------CT----AAGT--G--TT--
gi|14 : tttgaatccatgtAAATTTGGA-CATA-TGGATAC-GCACAAAG--A-GGGAAACAT-GCC--TATTAATATNNNNNNNNNN-NNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NN---NNNN-NNN-NNNNNN-NNNNNNNNN-NNNNNNNNN-NNNN-NN--NNNN--N--N-NNNNNNN-N-NN-NNATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-Tatgagaagtaattgtctaaacaatc
gi|15 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAT-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATA-TGGGAG--TTCAAGTTTCT-ATATCA-T--GTATACATACGCAAAG-TAA---TACATTAATGTG-T-GTTTTTATTT-GTTATT-GT-TGAA-CA--GAAACTGT--AAAAAgnnnnnnnnnnnnnnnnnnnnnnnnnatat
gi|16 : TTTGAAAGAAAAAAACTA--TTTCAGCAAAAGGG-AAA-CT-TTGAGGGGCTG-TA-TTG--TTTAGAGT-CCACACT-AACACAC--CCTTTTTTAGTGTTTAGA-TTGCCTTTCTAATCGAGATGAATCTGCCGAA-ATCGATTA--TTAAA
gi|17 : --GGTGGACAACA-TGAAAAAGGTTCGAA-CTGTGTT-CC-AATGCACACTACCTCTAACATTTTT-TTCATT-CAAAATTAGC-AAAA-ATGTGATTCAAATTTACAG-TAACTATTTCAAAACAActagaagagaacacccttaacata
gi|18 : tG-TAGGAG--TTCAAGTTTTT-ATATCA-T--AT----ATATGCAAAA-TAG---TACATTAATGTT-T-ATTTTTGTTT-GTTACT-AT-TGAA-CA--GAAACTGT----AAAAAAAA-TCAATCA
gi|19 : AATGGG--GGAAT---TATA-GCA-A-CGTA-GG-AGC-TGAC-CC-CAGGG-CTGCTAA----AG-TATTGGGTGAAT---T-G-GTAA--GT--T-TTT-TTT--------A-----ATGT--A--
gi|2 : TCA-T--GT----AAACGCAAAA-TAG---TACATTTATGTT-T-GTTTT-GTTT-GTTATT-GT-TGAAACA---AAACTGT--AAAAAA-----TCAATCAAA-ACATGAAAATCTTTT-ACTTTTGCTCTCATTCTACTACG-CATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGT-G-AAGCAGACATGGACATTTC-GTCAGAAATTTGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA--A-GAAGAAA---AA-TAA-TA--CAG--ACTAGTTGCAGCAG-GC-ACAA----TCAC-GCG-T-----AAGCA-C-G--G---TG-AC---A----TGTA-------CAT---GACACTGT-TAC-----G----TAA---CAATG-GGTC-GAACGA-TTGCCGAGA-G-----ACGT--GAATGGG--AGAA----TATA-GCA-ATTATA-GT-GGCTTGAA--C-CAAGG-CTGTTGAT-ATAG-GTTTGAGTGAATTTGT-T-GTAA--GT--T-GTT-TCT--------AAT---AAGT--ATTTT--TTATTTT----T----A-A-----AAATCT-A-AAAC-AAATA--------------TCG-AT-ACCC-A----ATCTGATCATGCC-GCGGC-AGG--AAAGCCGGTA--AT---TAGA----CGG--------G--TA-AT-----T----AGATTCTATAGTCCTGATGTC---ATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGGGTAATG-TAGTATCAGAGTTTTT-AAAAATCAACCAACGTAAAACATGAATTTATTCATTCAAAAACGAAT-CCGA-GGTAAA-TAG--TATATATTC-GC--ATTTAGAGAA-A--TAAGGCGCGGCGTT-CGTGCTAAAAC--A-AA---AGATCATTTTGTT--G--TTTTATATTTC-TTG-GCTAC-TAG-AACAATGATTTTTGTTTAGCTTAACCCAGATCAGTC-TCTAGTTT-GTAATCTCCATTCATTGCGT-ACC-C--G-GTGAA-GTTATTA----TAA-TC-TGG-TT----ATG-CCTCGATTCCGTAGCAAACTTCCTTTGAT-ACCAGGAAGTA--ACATTGGATC-TACGTCCAAGGTGGCCTCATCCGGAATAAGACACATTCATGTTGGAAGTGCTG-TAAC--AATTTAGGTTTCTAAGG-CAA-CTC--AGTACTTTGTATTC-TATTCAAACAAAAATTT-GA-CATA-TGGATACGGCACAAAGAAA-GGG-AACAATGCCTGTATAAATAT--TTTGGAGTCCAGAAGGTCAAAGGTCGAATGTCACAGTGCATGGAAATTGGACAATGTTAATTTAGTTGATCGCATACTG-TTTCCA-CATAAATTCTTTCAGTGAT-AAAT-GGGCATTA-----T-TGTTTGT-A-ACAAAATTATTTATACC-TTTT-TAGAAAAT--A---GTTA-TATGATAA--AAT-AATACATAAAA-TTG-AAATATGGAATTGAAGGACAAATACATTTTATAACAATTCAT-ATATGGTAATGAGTTTGAAATTTATGACAAA-ATGAGAAGGGTTGGTGGG-GACACCAAAATGGTTTCAAAACTTTGTT-CCAAATGCACACTACCCCCAAC-TTTTTATTCATTAAAAAATGA-C-AAAATATG-GTTTCGAATCTGCAATTGGCAA-TTCACAAAAAGTTTAAATTCAGGA--TCTTGCCTATATTGAATTTTAATTGACCAAAATTTGACATAAAAATTTGGTC--ATTTTCCCCA-TAAGGAATGTAGAGTAATCTGTTA-TATATTCTAG-ATTTTTGTGAAAAAATTATCTAAAATTTCTAAAGACATT-TAAATCCATTATTAAT----------TTTCATGAAATAAAAGATAATGAAGA-ATTATTCATGTCCAGAA-TATTTGTTTT-TATTT-GCTG-TTTTGCTGTGGAAAATGGTGA-TTTTCAAGAAAACAAG-TAA-TTTCGACAAAGGGGTTAA-TTCTTGGAGGGCTGTTAACTC--T---AAGTCCCGCACTAAACATACCTTTTTTCTTTGTG-TTGAA--TGCCTTTCT-GTCAAGATGAATGAG-TTAAG--GGG-TA-TTT-AAAAGTTTAATTCCAATGGAAAAATT-TCATcagagcagttgtcta
gi|20 : TTC-TATT-AAAACCAATTTTG----ATA-TAGATGC-GTACAAAA--ATGGG-AATATG-CC--TATCGAC----TTTGGGGC-CAGAAGGTCAAAAGTC-ATTGTCACAGTGC
gi|21 : -GCATTTT-ATCATTCTCACAAGGGT--GAGT-GA-CA-GAAGAAG---AA-TGATTA--CAG--AC------CAGCAA-GC-ACAAGATTTCGC-GGG-T-----AAGCACC-GGTG---TC-AT---A----CGT
gi|22 : CTGGTGGT-GATTTTT---ACC--G-CAGAGTGAGAT-C--T--ATAT-T-TTT--TATGTCGTAA-TATG-GGCA-AATG-TAGGAGTTTTC-AGTTTTT-
gi|23 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACA--G-C-GAGTTAG-T-T--TCCATA
gi|3 : taaT--ATTATTCTCACAAG--T--GAAT-GG-CA-GAAGGAG---AA-TAA-TA--CAG--ACCAGCT-CAGCAG-GC-ACAA----TCAC-GCG-TTTACAAG-TA-C-GGTG------AC---A----TGTAGGCC---TATAC-AACACTACCTACAAAATG----T-A---CTATG-GGTCG-AACGA-TTGCCGAGAGG------CGT--GAATGGG--AGAAT---TATA-TAACAGCATA-GT-GGC-TGAA-CC-CAAGG-CT-------------ACTGAATGAAT---T-T-GTAA--GT--T-TTT-TTTTAATGTAGA-----GAGT--A--------ATTGT----CT-AAA-A-----CAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-AAT----CTGGTCATG-CCAC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AAC-TATAT-----TCTATAG--TC------CCTGATGTCC-AATAC-ATCATTTA-TG-AA-TTATTATTTTGAATAAAAAGTGT-AATATAGTATCAGAATTTTT-AAAA-TC-ACCAACGTAAGCAATGAATTTATTCAAC--AAAAAGAATCCCGA-GGTAAAATAG--TTTATC----GC--ATTTAGAGAA-A--TGTGGCGCGGCGTT-CATGCTAAAAC-GA-AA---GG-TCATTTTGTTTTAA-TTACATGTTTCTATGTGGTAC-TAG-ATCAATAA--TTTGTTT--CGG-------ATCTGT--TCTGTTTT-GTAG-ATACATCCATTTTGTAACCAC--ATG-GAATGTTA-TA-----AA-TCATGGATTCATGGTGCCATCA-TT-CG--GGAAA--TC-----AT-ACCAGGAAGTAC-GCATC---TC-T---TCGAA-GTGGGTACAT--GGAA--------------GTTG-A----CTGTTAAAATAATG--GGTTT-TAAGGAAAA-CTCA-AGTAGTTTGTATTC-TATTC-AAACCAAATTTGGA-TACA-TGGATAC-GTATAAAGA-A-GGG-AACAT-GTA--TATTA--GT--TTTGGAGT-CAGAAGGTCAAAGGAA-ATTGTCACAGTGCA-------TGGACAATATTGATTTCG-TG---GCAT-ATG-TTTCCA-CATGTATTT-TTCAGTGAT--AAT-TC--ATTA--TTAT-TGTTTGT-GTAC-TACTTATTTCTACT-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATAC--AAAATTTGCAAATAT-AAATTGAAGA--ATATGCATTTTATAACAAATCAT-ATATTGT
gi|4 : atgt-----G----T-G---TAATG-GGC--GAACGA-TT-CCGAGAGG------CGC--GAA---G--GCAAT---TA--------ATGT------GC-TCTA-C------G-TTGCTGATGATAG-TACTGAGTGAAT---T-TTATAAAGGT--T-TTT-TTT--------ATGTACAGATCAA--TTGTCTATTTTAACATACAAATA-----AAATCC-ACAAACTAAGTAAAGTTACTGGGTTATCGTATTACCC-AAT---TATGATCTTG-C-CT-CT-AGGTCAATACC--TTAGATAGCTGCAGGAGCG--------AA--TA-TC-----T----CG--TTA-----CCCGATGTCC-AATGC-TTTAGTTTATTGAA-TTATCACTTTGAATAGAAAATGA-AAT-TATTAACATAGTTTTT-AAATATC-ACGAACGAAAACAATGAATC------------AAT---TCCCGATGGTAAAATAAATCTTCT-----CCCAGTTTAGAGAA-AGTTATGGCGCGGCGTTTCGTGCTGAAACCGA-A-----TATCATTTTGTT--GA-T---ATATTCCTTTGCTCTAGATAGTATCAATGT--ATTGTTT--CTTG------ATCGGTCCTCCGCTTTTGTAT-ATACATTC-TTTGATAACCACATG-G-AAAGGTTA-TA------A--CATGGATTACTAGTGTCATCA-GTC----GAAAA--TC-----ATTACCAGGAAGTACCACATC---TCGT---TCCTT-GTGGGTGCAT--GGAA--------------GTTGAC----TTGTTAAA------------------GATAATCTCAGAGTACTTTGTATTCGTATTNNNNNNNNNNNNNNNN-NNNN-NNNNNNN-NNNNNNNN--N-NNN-NNNNNNNNN--NNNNNNNNN--NNNNNNNN-NNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCT----TTAG--G---GGAT-ATG-TTTACA-CATGTATTC-TTCAGTTAT-AAAT-AA--ATTA-----T-TGTTT----------ATTATTTAT-CC-TTCTATAGACAAT--AT--GTTAGTATGATAA--tgt
gi|5 : aa-AA-TCATCATTTTGAATAAAAAG-GT-ATT-TAGT-TCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGA-TCCCGA-GGTAAA-TAG--TTTATATATCGC--ATTTAGAGAA----TATGGCGCGGCGTT-CGTGCTAAA-C-GA-A-----GATCATTTTGTT--GA-TTTTATATTT--TTGCGCTAC-TAG-ATCAATAAA-TTTGTTT--CTT-------ATCG--T-TCTGCTTT-GTAG-ATACATCCATTT-GTAACCAC--A-G-GAATGTTA-TAAATCTAAATCATGGATTCATGGTC-CATCA-TTCCG--GAAA---TC-----AT-AC-AGGAAGTAC-ACATC---TC-T---TCCAA-GTGGTTGCAT--GGAA--------------GTTGA-----CTGTTAAA--A-TT--GGTTTCTAGAGATAA-CTCA-AGTACTTTGTATTC-TATTCAAA-CAAAATTTGGAACATAATGGATAC--TACAAA---A-GGG-AA-ATG--C--TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATGTT-ATTTAG-TG---GCAT-TTG-TTTCCA-CATGTATTC-TTCAGTAATAAAAT-GA--ATTA--T--TATGTTTGTAA-AC-AAATTA-TTATACCTTTTT-TAGACAGT--AT--GTTA-TATGATTATTAATAAATACATAAAATTTGTAAATAT-GAATTG-AGA--AAATACATTTTAT-ACAAATCAT-ATATTGT-ATTGAGTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAAT-GGTTCAAAACTTTATT-CC-AATGCACA-TA--CCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATAT--GTTTCGAATCTGCAta
gi|6 : GGGTGT-ACTCTGGTGGC-GATTTTTTACACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTAATATGTCGTAAATATG-GGCA-AATG-TAG-AG--TTCAAGTTTTT-ATATCA-T--GTC---ATACGCAAA--TAG---TACATTAATGTT-T-GTTTT-GTTT--TTATTAGA-TGAA-CA--GAAACTGT--ACAAAA-----TCAATCAAA-ACATGAAAAATTTTTCACTTTTGCTCTCATTCTAC----TCATAC--AATGATGAC-TATAC-AAATG--TAAACAA---ACTCA-CGACT-GAAC--TTGGA-TG--TAC-TC-GC-CA--AACATTTC--ACATTTAG-T-CTAGGGTTATA-TTGGGG-AAGCAGACATGGATTTTTCCGTCAGAAATTAGGCT-GCATCT--ATT-TTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACTAGTTGCAGC-G-GC-ACAA----TC-C-GCG-TTTGCAAGCCA-A-CGTGA--TGTAC--------TGTAGGCCA--TACA--AACACTG--TAC-----G----T-A---CAATG-GA-----------TGCCGAGA-G-----ACGT--GAATGGG--AGAAT---TATA-GC---ACGTA-GTGGGC-TGAAGCC-CAAGG-ATGTTGAT-ATAGTTTCTGAGTGAAT---T-TGGTAA--GT--TGTCT-ATT--------------AAGT--AT-TT--TTATTTT--------AA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-A----ATCTGATCATG-C-GC-GCAAGG--AAAGCC-------------------CGGT------AAATTAGATTTCTAT----AG--TC------CCTGATGTCCTAATGC-A
gi|7 : gaatttaGGTGTCACTCTGGTGGTAGATTTTT---ACCACG-C-GAGTGAG-T-CACTCCATAC-TATTTA-TTTGTCGTAAATATGCGGCACGATGGTAGGAG--TTCAACTTTTTTAT-TCAGTAAGT----AGACGCAAAAATAAGTTTACATTA-TGTT-T-GTTTTTGTTTTGTTATT-GTATGAA-CA--GAAACTCT--AAAA---AAA-TCAATCAAACACATGAAAATCATTTTAC-TTAGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCGACG-CT-GAAC---TGGAATG--TACTTC-GCACAAAAACATTTCAAACATTTAGAT-CTAGGGT-ATATTTGTGA-AAGCAGACATGGACATTTCGGTCAGAAATTA-GCTGGCATCTAAATTTTGCTCAC-AG--T--GAGTGGA-CA-GAAGGAATATAA-TAA-TACTCAGGCACCAGCTGCAGCAGCGCAACAA----TCAC-GCGTTTTACAA-ACA-C-TCCG---TG-ACAAAA----TGTAGGTCCCGCATA--CAAACTG--TAC-----G----T-A---CAATA-GGTCG--ACGA-TTGCCGAAGAC-----GCGTAGAAATGGGC-AGAAT---TCTA-GGC-AACGTACGT-GGC-TGAA-CCGCAAGG-CTGTTGAT-ATAG-TTCTGAGTGAAT---T-T-GTAA--GTTGT-TCT-ATT--------T-----AAGT--A--TT--TTATTTT----T---TA-A-----AAATCTAACAAAATAAATA--------------TCG-AT-
gi|8 : agtCTCTGGTGGT-GATTTTTT--ACA--GGC-GAGTGAG-TTC--TCCATACCT-TTTA-TTTGTCGTAA-TATG-GGCA-AATG-TAGGAG--TTCAACTTTTT-ATATCA-T--GT----ACACGCAAAA-TAG---TACATTAATGTTATAGTTTTTGTTT-GTTA-T-GT-TGAA-CAAGAAAACTCT--AAAAAAAAAATTCAA-CAAA-ACATGAAAATCTTTTTACTTTTGCTCTCA-TCTAC---GTCATACAAAATGATGACGTAT-CAAAATGCTTAAACAAGGGACGCG-CG-CTAGAACTTTTTGAATGTTTAC-TCAGC-CACTAACA-TTC--ACA-TTAG-TCCTAGGGT-ATA-TTGTGACCAGCAG-CATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATATTTCTCACAAG--TTGAAGT-GACCA-GAAGAAA---AATTAA-TA--CAG--ACCACTTGCAGCAG-GC-ACAA----TCACGGCGTTTTACAA-ACA-C---TG---TG-AC---A----TGTAGGCC---CATGACAACACTG--TAC-----G----T-A---CAATG-GGTC-GAACGATTTGCCGAGA-G-----ACGTG-GAATGGG--AGAAT---TCTATGCA-AGCGTA-GT-GGC-T
gi|9 : ATTTCACAAAAAGTTTAA-TTCAGGAACTCTTG-ATAGATTGAATTTT--TTGA-CAAAATCTGACTTAAAATTTGTGTCAT-TTCTCCCCAATAATG-CT--AGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAGAT-TAGGATTAAT----------TTTCATGAAATAACAGATAATGA--AGATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCAAG--AAAAAG-TAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--CTTTTTCTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAG-TTCAGATAGGTTA-TTCAAAAAGTTTAATT-CAATGAAAAAATT-TCATTTCACCAGAG-AACATCCTTAA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 1111 111 11111 11111 11 11 111 111 11 11 111 1 11 1 1111 111 11 333333333333333333333 111 22 11 1111111111 22 22222222 11 44444444444444 11 33333333333333333 22222222222222 2222222 111 11 222222222222222222222222222222222222222222222222222222222222 11 2222222 1111 22222 11 11 3333333 22 1 111111 222222 1 2222 111 22222 111 111 11 44444444444444 222222 22222222 111 111111 111111 11111 22222 1111111 11 1 11 1 1 11 1 11 1 1 1 1 1 1 11 1 1 11 1 111 1 222222222 11 2 11 1 4444444444 2222 1 1 1 1 1 1 1 1 11 11 1 1 111 1
lowQualScore : 8 5 555 77 5 5 5 5 77 888 6 7 6 6 5 77 5 5 77 7777 0 55 000 5 5 5 5 0 5 5 5 999 77 55555 8 1 44 0 0 44444 11 8 8 11 444 8 8 8 111 0 11 8 8 8 66 0 11 66 8 8 8 8 444 0 6 6 11 9 66 66 5 0 5 888 5 5 66 66 0 2 5 5 5 0000 5 000 22 4 222222222222222222222 0 333 11 88 4444444444 4 777 4 11 8 66666666 00 99 777 4 9999 4 4 4 4 4 4 66 4 777 4 8 66 66 8 4 22222222222222 66 00 66 11111111111111111 5 0 99999999999999 5 5 9999999 1 222 5 5 33 555555555555555555555555555555555555555555555555555555555555 5 5 6 5 5 8 8 888 0 8 0 8 0 1 11 5 8 0 11 22 1 5 7777777 5555 0 6 77 6 22222 99 6 11 5 3 8 8 0 99 11 4444444 11 8 8 0 1 0 666666 8 5 0 8 888888 88 0 11 55 6 8 1111 111 00000 8 8 0 444 8 444 8 11 77777777777777 666666 0 44444444 8 0 8 88 6 11 4 0 5 5 1 5 444 5 5 1 555555 3 1 77 5 0 5 1 2 2 1 88 999999 77 6 6 6 77 33333 77777 6 2 9999999 6 6 99 99 6 1 11 3 3 3 7 0 3 33 2 3 3 0 7 3 7 33 2 0 66 6 3 0 0 2 2 0 0 0 3 2 0 3 22 3 3 3 7 7 7 3 88 3 7 333 3 333333333 3 33 3 0 3 3 33 3 0 3333333333 4444 0 0 3 0 0 0 0 0 0 0 6 55 8 8 8 8 0 11 0 8 8 11 3 0 88 3 3 44 0 88 0 0 3 444 3 3
lowQualScore : . . ... .. . . . . .. ... . . . . . .. . . .. .... . .. ... . . . . . . . . ... .. ..... . . .. . . ..... .. . . .. ... . . . ... . .. . . . .. . .. .. . . . . ... . . . .. . .. .. . . . ... . . .. .. . . . . . .... . ... .. . ..................... . ... .. .. .......... . ... . .. . ........ .. .. ... . .... . . . . . . .. . ... . . .. .. . . .............. .. .. .. ................. . . .............. . . ....... . ... . . .. ............................................................ . . . . . . . ... . . . . . . .. . . . .. .. . . ....... .... . . .. . ..... .. . .. . . . . . .. .. ....... .. . . . . . ...... . . . . ...... .. . .. .. . . .... ... ..... . . . ... . ... . .. .............. ...... . ........ . . . .. . .. . . . . . . ... . . . ...... . . .. . . . . . . . .. ...... .. . . . .. ..... ..... . . ....... . . .. .. . . .. . . . . . . .. . . . . . . . .. . . .. . . . . . . . . . . . . . .. . . . . . . . .. . . ... . ......... . .. . . . . .. . . .......... .... . . . . . . . . . . . .. . . . . . .. . . . .. . . .. . . .. . .. . . . ... . .
lowQualScore : 0 7 777 99 7 7 7 7 99 777 7 3 7 7 7 99 7 7 99 9999 3 99 000 7 7 0 7 1 7 7 7 666 99 00000 0 4 66 8 8 88888 00 0 0 00 000 0 0 0 888 8 00 0 0 0 00 8 00 44 0 0 0 0 444 8 0 7 99 8 99 99 0 0 0 888 0 0 99 99 2 5 6 0 0 6666 0 444 11 4 666666666666666666666 2 888 99 88 1111111111 4 888 4 77 9 11111111 66 55 000 0 3333 0 0 0 4 4 4 22 4 888 4 9 11 11 9 4 77777777777777 11 66 99 66666666666666666 7 7 44444444444444 0 0 7777777 0 999 7 7 66 000000000000000000000000000000000000000000000000000000000000 7 7 7 7 7 8 0 222 8 0 8 0 8 0 00 6 0 8 66 00 0 6 5555555 0000 3 7 77 7 77777 22 7 88 6 2 0 0 8 00 00 0000000 22 0 0 8 4 8 222222 0 6 8 0 444444 88 8 66 66 0 0 0000 888 00000 0 0 8 000 0 000 0 00 00000000000000 444444 8 88888888 2 8 0 88 7 00 8 7 7 7 6 7 666 7 7 0 777777 1 6 99 7 3 7 3 5 0 0 22 333333 77 7 7 7 55 77777 33333 7 8 5555555 7 7 22 22 7 4 00 2 2 2 0 0 2 88 5 2 2 0 3 3 3 88 5 0 55 5 2 0 0 5 5 0 0 0 2 5 0 2 55 3 2 2 3 3 3 3 33 3 3 777 3 777777777 2 22 2 0 2 2 88 2 0 8888888888 8888 0 0 2 0 0 0 0 0 0 8 4 88 0 0 0 0 8 00 8 0 0 00 8 8 88 2 2 00 8 88 8 0 2 222 7 3
consensus : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATG-TAGGAG--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAA-CA--GAAACTGT--AAAAAAAAAA-TCAATCAAA-ACATGAAAATCTTTTTACTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGTGG-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCG-TTTACAAGGCA-C-GGTG---TG-AC---A----TGTAGGCC---CATA--AACACTG--TAC-----G----T-A---CAATG-GGTCGGAACGA-TTGCCGAGAGG-----GCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--T-TCT-TTT--------A-----AAGT--A--TT--TTATTTT----TA-AAA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-AAT--ATCTGATCNTG-C-GC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AA--TA-AT-----T----AG--TC------CCCGATGTCC-AATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGNGT-ATT-TAGTATCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAAATAGTTTATAT---GC--ATTTAGAGAA-A--TATGGCGCGGCGTT-CGTGCTAAAAC-GA-AA---GGATCATTTTGTT--GA-TTTTATATTTCTTTGCGCTAC-TAG-ATCAATAA--TTTGTTT--CTT-------ATCGGTC-TCTGCTTT-GTAG-ATACATCCATTTCGTAACCAC--G-G-GAATGTTA-TA----TAA-TCATGGATTCATGGTG-CATC-ATTCCG--GAAAA--TC-----AT-ACCAGGAAGTAC-ACATC---TC-T---TCCAA-GTGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTCTAAGGATAA-CTCA-AGTACTTTGTATTC-TATTCAAAACAAAATTTGGA-CATA-TGGATAC-GTACAAAG--A-GGG-AACATGGCC--TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATNTTAATTTAG-TG---GCAT-NTG-TTTCCA-CATGTATTC-TTCAGTGAT-AAAT-GA--ATTA--T--T-TGTTTGT-A-AC-AAATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATACATTTTATAACAAATCAT-ATATTGTAATTGATTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAATGGGTTCAAAACTTTGTT-CC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATATG-GTTTCGAATCTGCAG-TAGCAATTTCACAAAAAGTTTAAATTCAGGAACTCTTG-CTAGATTGAATTTT--TTGA-CAAAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTGTAGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCAAGGAAAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTA-TTTAAAAAGTTTAATT-CAATGAAAAAANT-TCATCTCACCAGAG-AACATCCTTAAG
Reference ( family-488 ) : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATG-TAGGAG--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAA-CA--GAAACTGT--AAAAAAAAAA-TCAATCAAA-ACATGAAAATCTTTTTACTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGTGG-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCG-TTTACAAGGCA-C-GGTG---TG-AC---A----TGTAGGCC---CATA--AACACTG--TAC-----G----T-A---CAATG-GGTCGGAACGA-TTGCCGAGAGG-----GCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--T-TCT-TTT--------A-----AAGT--A--TT--TTATTTT----TA-AAA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-AAT--ATCTGATCNTG-C-GC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AA--TA-AT-----T----AG--TC------CCCGATGTCC-AATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGNGT-ATT-TAGTATCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAAATAGTTTATAT---GC--ATTTAGAGAA-A--TATGGCGCGGCGTT-CGTGCTAAAAC-GA-AA---GGATCATTTTGTT--GA-TTTTATATTTCTTTGCGCTAC-TAG-ATCAATAA--TTTGTTT--CTT-------ATCGGTC-TCTGCTTT-GTAG-ATACATCCATTTCGTAACCAC--G-G-GAATGTTA-TA----TAA-TCATGGATTCATGGTG-CATC-ATTCCG--GAAAA--TC-----AT-ACCAGGAAGTAC-ACATC---TC-T---TCCAA-GTGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTCTAAGGATAA-CTCA-AGTACTTTGTATTC-TATTCAAAACAAAATTTGGA-CATA-TGGATAC-GTACAAAG--A-GGG-AACATGGCC--TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATNTTAATTTAG-TG---GCAT-NTG-TTTCCA-CATGTATTC-TTCAGTGAT-AAAT-GA--ATTA--T--T-TGTTTGT-A-AC-AAATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATACATTTTATAACAAATCAT-ATATTGTAATTGATTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAATGGGTTCAAAACTTTGTT-CC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATATG-GTTTCGAATCTGCAG-TAGCAATTTCACAAAAAGTTTAAATTCAGGAACTCTTG-CTAGATTGAATTTT--TTGA-CAAAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTGTAGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCAAGGAAAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTA-TTTAAAAAGTTTAATT-CAATGAAAAAANT-TCATCTCACCAGAG-AACATCCTTAAG
gi|1 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAT-A-TTTA-TATGTCGTAAATATT-TGCA-ACTG-TAGGAT--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATAAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAA-CA--AAAACTGTAAAAAAAAAAAA-TCAATCAAA-ACATGAGAATCATTTT-CTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--AC----AG-T-CTAGGGT-ATG-TTGT-G-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-ACG--TTACAAGGCA-CAGGTGGAATGTAC---AATATTGTAGGGC---CATA--AACACTG--TAC-----A----T-ACGTCAATGTGGTCGGAACGA-TTG-CGAGAGGACGACGCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGGCCTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GG--T-GCC-ATT--------A-----AAGT--A--TT--TTATATT----TA-AAA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-CCCCAAATTGATCTGATCCTG-C-GC-G--AGG--AAAGCC--T----T---T-------CGG-------AA--TA-AT-----T----AG--TC------CCTGATGTCC-AGTGCAATTATTTT-TT-AACTCATCATTTTGAATAAAAAGGGT-ATC-AAGTATCAGAGTTTTTAAAAAATC-ACCAATGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAAA--------AT---G-----TTAGAGAATA--TGCGGCGCGGCGTT-CATGCTAAAAC-GATAA---GGATCACTTTGTT--GATTTTTATATTTCTTTGCGCTAC-TAG-ATCAA-AA--TTTGTTC--CTT-------ATCGGT--TGTGCTTT-GTAG-ATACATCCATTTTGTAACCA---G-G-GAATG-TA-T-----TAA-TCATGGA-TCATGGTG-CATC-TTTC----GAAAA--CC-----AT-ACCAGGAAGTAC-ACA-C---TC-T---TCCAA--TGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTTTAAGGATAA-CTCA-AGTACTTGTTTTTC-TATTCAAAACAAAATTTGGA-CATA-TGGAT---GTACAAAG--A-GGA-AACATGGCC--TATTATTAT--TTTGGAGT-CA-AAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATT-GACAGTTTTAATTTAG-T-----CAC-TTGTTTTCCACCACGTAATT-TTCAGTGAT-AAATGGA--ATTAATT--T-TGTTCAT-ATAC-AAATTATTTATACC-TTTT-TAGACAGTTGATTGGTTA-TATAATTA--GATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATA-A-TTTATAACAAATCATCATATTGTAATTGATGTGAAATTTATGACAAAGATG-GAAGGG--GGT-GG-GACA--AAAATGGGTTCAAAACTTTGTTCCC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-C-AAATGAGCAAAAATATG-ATTTCAAATCTACAG-TAGCAATTTCAC-AAAAGTTT-AATTCAGAAACTCTTG-CTAGATTGGATTTT--TTGA-C-AAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTAT--A-TAATCTGTTATTA---TCTAGAATTTTTGAAAAAAAATTATG-AAAAGTTAT-AAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTA-TGTCATGAA-TATTTGTTTTATA-TT-G-TGTTTTC-TTGTGGAAAATGGTAAGTTTTAAAAGAAAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTCAGGGGCTG-TAACTC--TTTAAGGT-CCGCACT-AACATAC--TTTTTC-TTGTGTTTGAATTTGCCGTTCTGGTCAAGATGAATGAGTTTAAAATGGGTTA-TTCAAAAAGTTTAATT-CAA-GAAAAAAA---------ACCAGAG-AACATCCTTAAG
gi|10 : TTATTAT-TTCTAGAATTTTTG-AAAAAAATTCTGTGAAAGTTATAAAA--ATTATAAAT-TATGATTAATNGTGATTAATTTTCATGAAATAAAAGATGATGA--ATATTATTC-TGTCATGAAATATTTGTTTTATA-TTTG-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCA--GAAAAAAGTAACTTTCAGCAAAGAGG-TAAACT-TTGAGGGGCTG-TAACTTCTTTTAAAGT-CGCCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTATTTTAAAAAGTTAAATT-CAATGAAAAAAATGTCATCTCACCAGAGAAACATCATTAAG
gi|11 : A--------------TCT-AT-ATAC-AAT----CTGATCTTG-CCGC-GC-ATGT-CAAGCC--T---AG---T-------CAGTTAGCCTAAGGTA-ATA----T----AG--TC------CCCGATGTCC-AATG----CATTTT-TT-AA-tttcatcgttattttgttatattttcag
gi|11 : tatcC--ATATAGATAA-A--TTTAGCGCAGATTT-CGTCCTAAAAC-AA-AAAAGAGATCATTTTGTT--GA-aatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttctcccatatagataaatttagcgcagatttcgtcctaaaacaaaaaagagatcattttgttga
gi|12 : tatcatctatatacaatctgatcttgccgcgcatgtcaagcctagtcagttagcctaaggtaatatagtccccgatgtccaatgcattttttaaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttctccGGCA-C-AAT-------AC--------TGTACATC---CATAT-GACACGG--TGC-----G----T-A---CAATG-GGTCG-AACGA-TTGTCGAGAGG------CGT--GAATAGG--AGAAT---TATA-GCA-A-CGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--TGTCTATTT--------T-----AAGT--A--TT--TTATTTT----TA-AAA-ATCTACAAACTT-AGAAACTAAATA--------------TCG--------------ATCTGATCCTGCC-GC-GC-AGG--AAAGCG--T---AT---T-------------------------------------------------CCAATGCCC-AATGC-ATAATTTT-TT-AA-TCATCATTTTGAATAAAAAG
gi|13 : tT--ATT-TTCTCACAAG--T--GAAT-GGGCACGAAGAGA---A--TAA--A--CAG--ACCA-CT-CAGCAG--C-ACAA----TCAC-GCG-TTTACAA-GTA-C----G---TG-AC---A----TGTAGGCC---TATAC-AACACTACCTAC-----AAAATT-A---CTATG-GGTC-GAACGATTTGCC--GAAG-----GCGT---AATGGAGCAGACTGGATATA-ACA-CACATA-GT-G---TTAA-CC-ACAGG-C-------------TACTGAATGAAT---TCT-GTAA--GT--T-TTT-TTT--------CT----AAGT--G--TT--
gi|14 : tttgaatccatgtAAATTTGGA-CATA-TGGATAC-GCACAAAG--A-GGGAAACAT-GCC--TATTAATATNNNNNNNNNN-NNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NN---NNNN-NNN-NNNNNN-NNNNNNNNN-NNNNNNNNN-NNNN-NN--NNNN--N--N-NNNNNNN-N-NN-NNATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-Tatgagaagtaattgtctaaacaatc
gi|15 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAT-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATA-TGGGAG--TTCAAGTTTCT-ATATCA-T--GTATACATACGCAAAG-TAA---TACATTAATGTG-T-GTTTTTATTT-GTTATT-GT-TGAA-CA--GAAACTGT--AAAAAgnnnnnnnnnnnnnnnnnnnnnnnnnatat
gi|16 : AAGAAAAAAACTA--TTTCAGCAAAAGGG-AAA-CT-TTGAGGGGCTG-TA-TTG--TTTAGAGT-CCACACT-AACACAC--CCTTTTTTAGTGTTTAGA-TTGCCTTTCTAATCGAGATGAATCTGCCGAA-ATCGATTA--TTAAA
gi|17 : tttga--GGTGGACAACA-TGAAAAAGGTTCGAA-CTGTGTT-CC-AATGCACACTACCTCTAACATTTTT-TTCATT-CAAAATTAGC-AAAA-ATGTGATTCAAATTTACAG-TAACTATTTCAAAACAActagaagagaacacccttaacata
gi|18 : tG-TAGGAG--TTCAAGTTTTT-ATATCA-T--AT----ATATGCAAAA-TAG---TACATTAATGTT-T-ATTTTTGTTT-GTTACT-AT-TGAA-CA--GAAACTGT----AAAAAAAA-TCAATCA
gi|19 : AATGGG--GGAAT---TATA-GCA-A-CGTA-GG-AGC-TGAC-CC-CAGGG-CTGCTAA----AG-TATTGGGTGAAT---T-G-GTAA--GT--T-TTT-TTT--------A-----ATGT--A--
gi|2 : TCA-T--GT----AAACGCAAAA-TAG---TACATTTATGTT-T-GTTTT-GTTT-GTTATT-GT-TGAAACA---AAACTGT--AAAAAA-----TCAATCAAA-ACATGAAAATCTTTT-ACTTTTGCTCTCATTCTACTACG-CATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGT-G-AAGCAGACATGGACATTTC-GTCAGAAATTTGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA--A-GAAGAAA---AA-TAA-TA--CAG--ACTAGTTGCAGCAG-GC-ACAA----TCAC-GCG-T-----AAGCA-C-G--G---TG-AC---A----TGTA-------CAT---GACACTGT-TAC-----G----TAA---CAATG-GGTC-GAACGA-TTGCCGAGA-G-----ACGT--GAATGGG--AGAA----TATA-GCA-ATTATA-GT-GGCTTGAA--C-CAAGG-CTGTTGAT-ATAG-GTTTGAGTGAATTTGT-T-GTAA--GT--T-GTT-TCT--------AAT---AAGT--ATTTT--TTATTTT----T----A-A-----AAATCT-A-AAAC-AAATA--------------TCG-AT-ACCC-A----ATCTGATCATGCC-GCGGC-AGG--AAAGCCGGTA--AT---TAGA----CGG--------G--TA-AT-----T----AGATTCTATAGTCCTGATGTC---ATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGGGTAATG-TAGTATCAGAGTTTTT-AAAAATCAACCAACGTAAAACATGAATTTATTCATTCAAAAACGAAT-CCGA-GGT-AAATAGTATATATTC-GC--ATTTAGAGAA-A--TAAGGCGCGGCGTT-CGTGCTAAAAC--A-AA---AGATCATTTTGTT--G--TTTTATATTTC-TTG-GCTAC-TAG-AACAATGATTTTTGTTTAGCTTAACCCAGATCAGTC-TCTAGTTT-GTAATCTCCATTCATTGCGT-ACC-C--G-GTGAA-GTTATTA----TAA-TC-TGG-TT----ATG-CCTCGATTCCGTAGCAAACTTCCTTTGAT-ACCAGGAAGTA--ACATTGGATC-TACGTCCAAGGTGGCCTCATCCGGAATAAGACACATTCATGTTGGAAGTGCTG-TAAC--AATTTAGGTTTCTAAGG-CAA-CTC--AGTACTTTGTATTC-TATTCAAACAAAAATTT-GA-CATA-TGGATACGGCACAAAGAAA-GGG-AACAATGCCTGTATAAATAT--TTTGGAGTCCAGAAGGTCAAAGGTCGAATGTCACAGTGCATGGAAATTGGACAATGTTAATTTAGTTGATCGCATACTG-TTTCCA-CATAAATTCTTTCAGTGAT-AAAT-GGGCATTA-----T-TGTTTGT-A-ACAAAATTATTTATACC-TTTT-TAGAAAAT--A---GTTA-TATGATAA--AAT-AATACATAAAA-TTG-AAATATGGAATTGAAGGACAAATACATTTTATAACAATTCAT-ATATGGTAATGAGTTTGAAATTTATGACAAA-ATGAGAAGGGTTGGTGGG-GACACCAAAATGGTTTCAAAACTTTGTT-CCAAATGCACACTACCCCCAAC-TTTTTATTCATTAAAAAATGA-C-AAAATATG-GTTTCGAATCTGCAATTGGCAA-TTCACAAAAAGTTTAAATTCAGGA--TCTTGCCTATATTGAATTTTAATTGACCAAAATTTGACATAAAAATTTGGTC--ATTTTCCCCA-TAAGGAATGTAGAGTAATCTGTTA-TATATTCTAG-ATTTTTGTGAAAAAATTATCTAAAATTTCTAAAGACATT-TAAATCCATTATTAAT----------TTTCATGAAATAAAAGATAATGAAGA-ATTATTCATGTCCAGAA-TATTTGTTTT-TATTT-GCTG-TTTTGCTGTGGAAAATGGTGA-TTTTCAAGAAAACAAGTAA-TTTCGACAAAGGGGTTAA-TTCTTGGAGGGCTGTTAACTC--T---AAGTCCCGCACTAAACATACCTTTTTTCTTTGTG-TTGAA--TGCCTTTCT-GTCAAGATGAATGAG-TTAAG--GGG-TA-TTT-AAAAGTTTAATTCCAATGGAAAAATT-TCATcagagcagttgtcta
gi|20 : TTC-TATT-AAAACCAATTTTG----ATA-TAGATGC-GTACAAAA--ATGGG-AATATG-CC--TATCGAC----TTTGGGGC-CAGAAGGTCAAAAGTC-ATTGTCACAGTGC
gi|21 : -GCATTTT-ATCATTCTCACAAGGGT--GAGT-GA-CA-GAAGAAG---AA-TGATTA--CAG--AC------CAGCAA-GC-ACAAGATTTCGC-GGG-T-----AAGCACC-GGTG---TC-AT---A----CGT
gi|22 : CTGGTGGT-GATTTTT---ACC--G-CAGAGTGAGAT-C--T--ATAT-T-TTT--TATGTCGTAA-TATG-GGCA-AATG-TAGGAGTTTTC-AGTTTTT-
gi|23 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACA--G-C-GAGTTAG-T-T--TCCATA
gi|3 : taaT--ATTATTCTCACAAG--T--GAAT-GG-CA-GAAGGAG---AA-TAA-TA--CAG--ACCAGCT-CAGCAG-GC-ACAA----TCAC-GCG-TTTACAAG-TA-C-GGTG------AC---A----TGTAGGCC---TATAC-AACACTACCTACAAAATG----T-A---CTATG-GGTCG-AACGA-TTGCCGAGAGG------CGT--GAATGGG--AGAAT---TATA-TAACAGCATA-GT-GGC-TGAA-CC-CAAGG-CT-------------ACTGAATGAAT---T-T-GTAA--GT--T-TTT-TTTTAATGTAGA-----GAGT--A--------ATTGT----CT-AAA-A-----CAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-AAT----CTGGTCATG-CCAC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AAC-TATAT-----TCTATAG--TC------CCTGATGTCC-AATAC-ATCATTTA-TG-AA-TTATTATTTTGAATAAAAAGTGT-AATATAGTATCAGAATTTTT-AAAA-TC-ACCAACGTAAGCAATGAATTTATTCAAC--AAAAAGAATCCCGA-GGTAAAATAGTTTAT-C---GC--ATTTAGAGAA-A--TGTGGCGCGGCGTT-CATGCTAAAAC-GA-AA---GG-TCATTTTGTTTTAA-TTACATGTTTCTATGTGGTAC-TAG-ATCAATAA--TTTGTTT--CGG-------ATCTGT--TCTGTTTT-GTAG-ATACATCCATTTTGTAACCAC--ATG-GAATGTTA-TA-----AA-TCATGGATTCATGGTGCCATC-ATT-CG--GGAAA--TC-----AT-ACCAGGAAGTAC-GCATC---TC-T---TCGAA-GTGGGTACAT--GGAA--------------GTTG-A----CTGTTAAAATAATG--GGTTT-TAAGGAAAA-CTCA-AGTAGTTTGTATTC-TATTC-AAACCAAATTTGGA-TACA-TGGATAC-GTATAAAGA-A-GGG-AACAT-GTA--TATTA--GT--TTTGGAGT-CAGAAGGTCAAAGGAA-ATTGTCACAGTGCA-------TGGACAATATTGATTTCG-TG---GCAT-ATG-TTTCCA-CATGTATTT-TTCAGTGAT--AAT-TC--ATTA--TTAT-TGTTTGT-GTAC-TACTTATTTCTACT-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATAC--AAAATTTGCAAATAT-AAATTGAAGA--ATATGCATTTTATAACAAATCAT-ATATTGT
gi|4 : atgt-----G----T-G---TAATG-GGC--GAACGA-TT-CCGAGAGG------CGC--GAA---G--GCAAT---TA--------ATGT------GC-TCTA-C------G-TTGCTGATGATAG-TACTGAGTGAAT---T-TTATAAAGGT--T-TTT-TTT--------ATGTACAGATCAA--TTGTCTATTTTAACATACAAATA-----AAATCC-ACAAACTAAGTAAAGTTACTGGGTTATCGTATTACCC-AAT---TATGATCTTG-C-CT-CT-AGGTCAATACC--TTAGATAGCTGCAGGAGCG--------AA--TA-TC-----T----CG--TTA-----CCCGATGTCC-AATGC-TTTAGTTTATTGAA-TTATCACTTTGAATAGAAAATGA-AAT-TATTAACATAGTTTTT-AAATATC-ACGAACGAAAACAATGAATC------------AAT---TCCCGATGGTAAAATAAATCTTCT---CCCAGTTTAGAGAA-AGTTATGGCGCGGCGTTTCGTGCTGAAACCGA-A-----TATCATTTTGTT--GA-T---ATATTCCTTTGCTCTAGATAGTATCAATGT--ATTGTTT--CTTG------ATCGGTCCTCCGCTTTTGTAT-ATACATTC-TTTGATAACCACATG-G-AAAGGTTA-TA------A--CATGGATTACTAGTGTCATC-AGTC----GAAAA--TC-----ATTACCAGGAAGTACCACATC---TCGT---TCCTT-GTGGGTGCAT--GGAA--------------GTTGAC----TTGTTAAA------------------GATAATCTCAGAGTACTTTGTATTCGTATTNNNNNNNNNNNNNNNN-NNNN-NNNNNNN-NNNNNNNN--N-NNN-NNNNNNNNN--NNNNNNNNN--NNNNNNNN-NNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCT----TTAG--G---GGAT-ATG-TTTACA-CATGTATTC-TTCAGTTAT-AAAT-AA--ATTA-----T-TGTTT----------ATTATTTAT-CC-TTCTATAGACAAT--AT--GTTAGTATGATAA--tgt
gi|5 : aa-AA-TCATCATTTTGAATAAAAAG-GT-ATT-TAGT-TCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGA-TCCCGA-GGTAAA-TAGTTTATATATCGC--ATTTAGAGAA----TATGGCGCGGCGTT-CGTGCTAAA-C-GA-A-----GATCATTTTGTT--GA-TTTTATATTT--TTGCGCTAC-TAG-ATCAATAAA-TTTGTTT--CTT-------ATCG--T-TCTGCTTT-GTAG-ATACATCCATTT-GTAACCAC--A-G-GAATGTTA-TAAATCTAAATCATGGATTCATGGTC-CATC-ATTCCG--GAAA---TC-----AT-AC-AGGAAGTAC-ACATC---TC-T---TCCAA-GTGGTTGCAT--GGAA--------------GTTGA-----CTGTTAAA--A-TT--GGTTTCTAGAGATAA-CTCA-AGTACTTTGTATTC-TATTCAAA-CAAAATTTGGAACATAATGGATAC--TACAAA---A-GGG-AA-ATG--C--TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATGTT-ATTTAG-TG---GCAT-TTG-TTTCCA-CATGTATTC-TTCAGTAATAAAAT-GA--ATTA--T--TATGTTTGTAA-AC-AAATTA-TTATACCTTTTT-TAGACAGT--AT--GTTA-TATGATTATTAATAAATACATAAAATTTGTAAATAT-GAATTG-AGA--AAATACATTTTAT-ACAAATCAT-ATATTGT-ATTGAGTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAAT-GGTTCAAAACTTTATT-CC-AATGCACA-TA--CCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATAT--GTTTCGAATCTGCAta
gi|6 : GGGTGT-ACTCTGGTGGC-GATTTTTTACACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTAATATGTCGTAAATATG-GGCA-AATG-TAG-AG--TTCAAGTTTTT-ATATCA-T--GTC---ATACGCAAA--TAG---TACATTAATGTT-T-GTTTT-GTTT--TTATTAGA-TGAA-CA--GAAACTGT--ACAAAA-----TCAATCAAA-ACATGAAAAATTTTTCACTTTTGCTCTCATTCTAC----TCATAC--AATGATGAC-TATAC-AAATG--TAAACAA---ACTCA-CGACT-GAAC--TTGGA-TG--TAC-TC-GC-CA--AACATTTC--ACATTTAG-T-CTAGGGTTATA-TTGGGG-AAGCAGACATGGATTTTTCCGTCAGAAATTAGGCT-GCATCT--ATT-TTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACTAGTTGCAGC-G-GC-ACAA----TC-C-GCG-TTTGCAAGCCA-A-CGTGA--TGTAC--------TGTAGGCCA--TACA--AACACTG--TAC-----G----T-A---CAATG-GA-----------TGCCGAGA-G-----ACGT--GAATGGG--AGAAT---TATA-GC---ACGTA-GTGGGC-TGAAGCC-CAAGG-ATGTTGAT-ATAGTTTCTGAGTGAAT---T-TGGTAA--GT--TGTCT-ATT--------------AAGT--AT-TT--TTATTTT--------AA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-A----ATCTGATCATG-C-GC-GCAAGG--AAAGCC-------------------CGGT------AAATTAGATTTCTAT----AG--TC------CCTGATGTCCTAATGC-A
gi|7 : gaatttaGGTGTCACTCTGGTGGTAGATTTTT---ACCACG-C-GAGTGAG-T-CACTCCATAC-TATTTA-TTTGTCGTAAATATGCGGCACGATGGTAGGAG--TTCAACTTTTTTAT-TCAGTAAGT----AGACGCAAAAATAAGTTTACATTA-TGTT-T-GTTTTTGTTTTGTTATT-GTATGAA-CA--GAAACTCT--AAAA---AAA-TCAATCAAACACATGAAAATCATTTTAC-TTAGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCGACG-CT-GAAC---TGGAATG--TACTTC-GCACAAAAACATTTCAAACATTTAGAT-CTAGGGT-ATATTTGTGA-AAGCAGACATGGACATTTCGGTCAGAAATTA-GCTGGCATCTAAATTTTGCTCAC-AG--T--GAGTGGA-CA-GAAGGAATATAA-TAA-TACTCAGGCACCAGCTGCAGCAGCGCAACAA----TCAC-GCGTTTTACAA-ACA-C-TCCG---TG-ACAAAA----TGTAGGTCCCGCATA--CAAACTG--TAC-----G----T-A---CAATA-GGTCG--ACGA-TTGCCGAAGAC-----GCGTAGAAATGGGC-AGAAT---TCTA-GGC-AACGTACGT-GGC-TGAA-CCGCAAGG-CTGTTGAT-ATAG-TTCTGAGTGAAT---T-T-GTAA--GTTGT-TCT-ATT--------T-----AAGT--A--TT--TTATTTT----T---TA-A-----AAATCTAACAAAATAAATA--------------TCG-AT-
gi|8 : agtCTCTGGTGGT-GATTTTTT--ACA--GGC-GAGTGAG-TTC--TCCATACCT-TTTA-TTTGTCGTAA-TATG-GGCA-AATG-TAGGAG--TTCAACTTTTT-ATATCA-T--GT----ACACGCAAAA-TAG---TACATTAATGTTATAGTTTTTGTTT-GTTA-T-GT-TGAA-CAAGAAAACTCT--AAAAAAAAAATTCAA-CAAA-ACATGAAAATCTTTTTACTTTTGCTCTCA-TCTAC---GTCATACAAAATGATGACGTAT-CAAAATGCTTAAACAAGGGACGCG-CG-CTAGAACTTTTTGAATGTTTAC-TCAGC-CACTAACA-TTC--ACA-TTAG-TCCTAGGGT-ATA-TTGTGACCAGCAG-CATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATATTTCTCACAAG--TTGAAGT-GACCA-GAAGAAA---AATTAA-TA--CAG--ACCACTTGCAGCAG-GC-ACAA----TCACGGCGTTTTACAA-ACA-C---TG---TG-AC---A----TGTAGGCC---CATGACAACACTG--TAC-----G----T-A---CAATG-GGTC-GAACGATTTGCCGAGA-G-----ACGTG-GAATGGG--AGAAT---TCTATGCA-AGCGTA-GT-GGC-T
gi|9 : ATTTCACAAAAAGTTTAA-TTCAGGAACTCTTG-ATAGATTGAATTTT--TTGA-CAAAATCTGACTTAAAATTTGTGTCAT-TTCTCCCCAATAATG-CT--AGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAGAT-TAGGATTAAT----------TTTCATGAAATAACAGATAATGA--AGATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCAAG--AAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--CTTTTTCTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAG-TTCAGATAGGTTA-TTCAAAAAGTTTAATT-CAATGAAAAAATT-TCATTTCACCAGAG-AACATCCTTAA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 1111 111 11111 11111 11 11 111 111 11 11 111 1 11 1 1111 111 11 333333333333333333333 111 22 11 1111111111 22 22222222 11 44444444444444 11 33333333333333333 22222222222222 2222222 111 11 222222222222222222222222222222222222222222222222222222222222 11 2222222 1111 22222 11 11 3333333 22 1 111111 222222 1 2222 111 22222 111 111 11 44444444444444 222222 22222222 111 111111 111111 11111 22222 1111111 11 1 11 1 1 11 1 11 1 1 1 1 1 1 11 1 1 11 1 111 1 222222222 11 2 11 1 4444444444 2222 1 1 1 1 1 1 1 1 11 11 1 1 111 1
lowQualScore : 8 5 555 77 5 5 5 5 77 888 6 7 6 6 5 77 5 5 77 7777 0 55 000 5 5 5 5 0 5 5 5 999 77 55555 8 1 44 0 0 44444 11 8 8 11 444 8 8 8 111 0 11 8 8 8 66 0 11 66 8 8 8 8 444 0 6 6 11 9 66 66 5 0 5 888 5 5 66 66 0 2 5 5 5 0000 5 000 22 4 222222222222222222222 0 333 11 88 4444444444 4 777 4 11 8 66666666 00 99 777 4 9999 4 4 4 4 4 4 66 4 777 4 8 66 66 8 4 22222222222222 66 00 66 11111111111111111 5 0 99999999999999 5 5 9999999 1 222 5 5 33 555555555555555555555555555555555555555555555555555555555555 5 5 6 5 5 8 8 888 0 8 0 8 0 1 11 5 8 0 11 22 1 5 7777777 5555 0 6 77 6 22222 99 6 11 5 3 8 8 0 99 11 4444444 11 8 8 0 1 0 666666 8 5 0 8 888888 88 0 11 55 6 8 1111 111 00000 8 8 0 444 8 444 8 11 77777777777777 666666 0 44444444 8 0 8 88 6 11 4 0 5 5 1 5 444 5 5 1 555555 3 1 77 5 0 5 1 2 2 1 88 999999 77 6 6 6 77 33333 77777 6 2 9999999 6 6 99 99 6 1 11 3 3 3 7 0 3 33 2 3 3 0 7 3 7 33 2 0 66 6 3 0 0 2 2 0 0 0 3 2 0 3 22 3 3 3 7 7 7 3 88 3 7 333 3 333333333 3 33 3 0 3 3 33 3 0 3333333333 4444 0 0 3 0 0 0 0 0 0 0 6 55 8 8 8 8 0 11 0 8 8 11 3 0 88 3 3 44 0 88 0 0 3 444 3 3
lowQualScore : . . ... .. . . . . .. ... . . . . . .. . . .. .... . .. ... . . . . . . . . ... .. ..... . . .. . . ..... .. . . .. ... . . . ... . .. . . . .. . .. .. . . . . ... . . . .. . .. .. . . . ... . . .. .. . . . . . .... . ... .. . ..................... . ... .. .. .......... . ... . .. . ........ .. .. ... . .... . . . . . . .. . ... . . .. .. . . .............. .. .. .. ................. . . .............. . . ....... . ... . . .. ............................................................ . . . . . . . ... . . . . . . .. . . . .. .. . . ....... .... . . .. . ..... .. . .. . . . . . .. .. ....... .. . . . . . ...... . . . . ...... .. . .. .. . . .... ... ..... . . . ... . ... . .. .............. ...... . ........ . . . .. . .. . . . . . . ... . . . ...... . . .. . . . . . . . .. ...... .. . . . .. ..... ..... . . ....... . . .. .. . . .. . . . . . . .. . . . . . . . .. . . .. . . . . . . . . . . . . . .. . . . . . . . .. . . ... . ......... . .. . . . . .. . . .......... .... . . . . . . . . . . . .. . . . . . .. . . . .. . . .. . . .. . .. . . . ... . .
lowQualScore : 0 7 777 99 7 7 7 7 99 777 7 3 7 7 7 99 7 7 99 9999 3 99 000 7 7 0 7 1 7 7 7 666 99 00000 0 4 66 8 8 88888 00 0 0 00 000 0 0 0 888 8 00 0 0 0 00 8 00 44 0 0 0 0 444 8 0 7 99 8 99 99 0 0 0 888 0 0 99 99 2 5 6 0 0 6666 0 444 11 4 666666666666666666666 2 888 99 88 1111111111 4 888 4 77 9 11111111 66 55 000 0 3333 0 0 0 4 4 4 22 4 888 4 9 11 11 9 4 77777777777777 11 66 99 66666666666666666 7 7 44444444444444 0 0 7777777 0 999 7 7 66 000000000000000000000000000000000000000000000000000000000000 7 7 7 7 7 8 0 222 8 0 8 0 8 0 00 6 0 8 66 00 0 6 5555555 0000 3 7 77 7 77777 22 7 88 6 2 0 0 8 00 00 0000000 22 0 0 8 4 8 222222 0 6 8 0 444444 88 8 66 66 0 0 0000 888 00000 0 0 8 000 0 000 0 00 00000000000000 444444 8 88888888 2 8 0 88 7 00 8 7 7 7 6 7 666 7 7 0 777777 1 6 99 7 3 7 3 5 0 0 22 333333 77 7 7 7 55 77777 33333 7 8 5555555 7 7 22 22 7 4 00 2 2 2 0 0 2 88 5 2 2 0 3 3 3 88 5 0 55 5 2 0 0 5 5 0 0 0 2 5 0 2 55 3 2 2 3 3 3 3 33 3 3 777 3 777777777 2 22 2 0 2 2 88 2 0 8888888888 8888 0 0 2 0 0 0 0 0 0 8 4 88 0 0 0 0 8 00 8 0 0 00 8 8 88 2 2 00 8 88 8 0 2 222 7 3
consensus : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATG-TAGGAG--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAA-CA--GAAACTGT--AAAAAAAAAA-TCAATCAAA-ACATGAAAATCTTTTTACTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGTGG-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCG-TTTACAAGGCA-C-GGTG---TG-AC---A----TGTAGGCC---CATA--AACACTG--TAC-----G----T-A---CAATG-GGTCGGAACGA-TTGCCGAGAGG-----GCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--T-TCT-TTT--------A-----AAGT--A--TT--TTATTTT----TA-AAA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-AAT--ATCTGATCNTG-C-GC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AA--TA-AT-----T----AG--TC------CCCGATGTCC-AATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGNGT-ATT-TAGTATCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAAATAGTTTATAT---GC--ATTTAGAGAA-A--TATGGCGCGGCGTT-CGTGCTAAAAC-GA-AA---GGATCATTTTGTT--GA-TTTTATATTTCTTTGCGCTAC-TAG-ATCAATAA--TTTGTTT--CTT-------ATCGGTC-TCTGCTTT-GTAG-ATACATCCATTTCGTAACCAC--G-G-GAATGTTA-TA----TAA-TCATGGATTCATGGTG-CATC-ATTCCG--GAAAA--TC-----AT-ACCAGGAAGTAC-ACATC---TC-T---TCCAA-GTGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTCTAAGGATAA-CTCA-AGTACTTTGTATTC-TATTCAAAACAAAATTTGGA-CATA-TGGATAC-GTACAAAG--A-GGG-AACATGGCC--TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATNTTAATTTAG-TG---GCAT-NTG-TTTCCA-CATGTATTC-TTCAGTGAT-AAAT-GA--ATTA--T--T-TGTTTGT-A-AC-AAATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATACATTTTATAACAAATCAT-ATATTGTAATTGATTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAATGGGTTCAAAACTTTGTT-CC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATATG-GTTTCGAATCTGCAG-TAGCAATTTCACAAAAAGTTTAAATTCAGGAACTCTTG-CTAGATTGAATTTT--TTGA-CAAAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTGTAGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCAAGGAAAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTA-TTTAAAAAGTTTAATT-CAATGAAAAAANT-TCATCTCACCAGAG-AACATCCTTAAG
Reference ( family-488 ) : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATG-TAGGAG--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAA-CA--GAAACTGT--AAAAAAAAAA-TCAATCAAA-ACATGAAAATCTTTTTACTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGTGG-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCG-TTTACAAGGCA-C-GGTG---TG-AC---A----TGTAGGCC---CATA--AACACTG--TAC-----G----T-A---CAATG-GGTCGGAACGA-TTGCCGAGAGG-----GCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--T-TCT-TTT--------A-----AAGT--A--TT--TTATTTT----TA-AAA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-AAT--ATCTGATCNTG-C-GC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AA--TA-AT-----T----AG--TC------CCCGATGTCC-AATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGNGT-ATT-TAGTATCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAAATAGTTTATAT---GC--ATTTAGAGAA-A--TATGGCGCGGCGTT-CGTGCTAAAAC-GA-AA---GGATCATTTTGTT--GA-TTTTATATTTCTTTGCGCTAC-TAG-ATCAATAA--TTTGTTT--CTT-------ATCGGTC-TCTGCTTT-GTAG-ATACATCCATTTCGTAACCAC--G-G-GAATGTTA-TA----TAA-TCATGGATTCATGGTG-CATC-ATTCCG--GAAAA--TC-----AT-ACCAGGAAGTAC-ACATC---TC-T---TCCAA-GTGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTCTAAGGATAA-CTCA-AGTACTTTGTATTC-TATTCAAAACAAAATTTGGA-CATA-TGGATAC-GTACAAAG--A-GGG-AACATGGCC--TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATNTTAATTTAG-TG---GCAT-NTG-TTTCCA-CATGTATTC-TTCAGTGAT-AAAT-GA--ATTA--T--T-TGTTTGT-A-AC-AAATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATACATTTTATAACAAATCAT-ATATTGTAATTGATTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAATGGGTTCAAAACTTTGTT-CC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATATG-GTTTCGAATCTGCAG-TAGCAATTTCACAAAAAGTTTAAATTCAGGAACTCTTG-CTAGATTGAATTTT--TTGA-CAAAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTGTAGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCAAGGAAAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTA-TTTAAAAAGTTTAATT-CAATGAAAAAANT-TCATCTCACCAGAG-AACATCCTTAAG
gi|1 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAT-A-TTTA-TATGTCGTAAATATT-TGCA-ACTG-TAGGAT--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATAAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAA-CA--AAAACTGTAAAAAAAAAAAA-TCAATCAAA-ACATGAGAATCATTTT-CTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--AC----AG-T-CTAGGGT-ATG-TTGT-G-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-ACG--TTACAAGGCA-CAGGTGGAATGTAC---AATATTGTAGGGC---CATA--AACACTG--TAC-----A----T-ACGTCAATGTGGTCGGAACGA-TTG-CGAGAGGACGACGCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGGCCTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GG--T-GCC-ATT--------A-----AAGT--A--TT--TTATATT----TA-AAA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-CCCCAAATTGATCTGATCCTG-C-GC-G--AGG--AAAGCC--T----T---T-------CGG-------AA--TA-AT-----T----AG--TC------CCTGATGTCC-AGTGCAATTATTTT-TT-AACTCATCATTTTGAATAAAAAGGGT-ATC-AAGTATCAGAGTTTTTAAAAAATC-ACCAATGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAAA--------AT---G-----TTAGAGAATA--TGCGGCGCGGCGTT-CATGCTAAAAC-GATAA---GGATCACTTTGTT--GATTTTTATATTTCTTTGCGCTAC-TAG-ATCAA-AA--TTTGTTC--CTT-------ATCGGT--TGTGCTTT-GTAG-ATACATCCATTTTGTAACCA---G-G-GAATG-TA-T-----TAA-TCATGGA-TCATGGTG-CATC-TTTC----GAAAA--CC-----AT-ACCAGGAAGTAC-ACA-C---TC-T---TCCAA--TGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTTTAAGGATAA-CTCA-AGTACTTGTTTTTC-TATTCAAAACAAAATTTGGA-CATA-TGGAT---GTACAAAG--A-GGA-AACATGGCC--TATTATTAT--TTTGGAGT-CA-AAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATT-GACAGTTTTAATTTAG-T-----CAC-TTGTTTTCCACCACGTAATT-TTCAGTGAT-AAATGGA--ATTAATT--T-TGTTCAT-ATAC-AAATTATTTATACC-TTTT-TAGACAGTTGATTGGTTA-TATAATTA--GATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATA-A-TTTATAACAAATCATCATATTGTAATTGATGTGAAATTTATGACAAAGATG-GAAGGG--GGT-GG-GACA--AAAATGGGTTCAAAACTTTGTTCCC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-C-AAATGAGCAAAAATATG-ATTTCAAATCTACAG-TAGCAATTTCAC-AAAAGTTT-AATTCAGAAACTCTTG-CTAGATTGGATTTT--TTGA-C-AAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTAT--A-TAATCTGTTATTA---TCTAGAATTTTTGAAAAAAAATTATG-AAAAGTTAT-AAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTA-TGTCATGAA-TATTTGTTTTATA-TT-G-TGTTTTC-TTGTGGAAAATGGTAAGTTTTAAAAGAAAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTCAGGGGCTG-TAACTC--TTTAAGGT-CCGCACT-AACATAC--TTTTTC-TTGTGTTTGAATTTGCCGTTCTGGTCAAGATGAATGAGTTTAAAATGGGTTA-TTCAAAAAGTTTAATT-CAA-GAAAAAAA---------ACCAGAG-AACATCCTTAAG
gi|10 : TTATTAT-TTCTAGAATTTTTG-AAAAAAATTCTGTGAAAGTTATAAAA--ATTATAAAT-TATGATTAATNGTGATTAATTTTCATGAAATAAAAGATGATGA--ATATTATTC-TGTCATGAAATATTTGTTTTATA-TTTG-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCA--GAAAAAAGTAACTTTCAGCAAAGAGG-TAAACT-TTGAGGGGCTG-TAACTTCTTTTAAAGT-CGCCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTATTTTAAAAAGTTAAATT-CAATGAAAAAAATGTCATCTCACCAGAGAAACATCATTAAG
gi|11 : A--------------TCT-AT-ATAC-AAT----CTGATCTTG-CCGC-GC-ATGT-CAAGCC--T---AG---T-------CAGTTAGCCTAAGGTA-ATA----T----AG--TC------CCCGATGTCC-AATG----CATTTT-TT-AA-tttcatcgttattttgttatattttcag
gi|11 : tatcC--ATATAGATAA-A--TTTAGCGCAGATTT-CGTCCTAAAAC-AA-AAAAGAGATCATTTTGTT--GA-aatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttctcccatatagataaatttagcgcagatttcgtcctaaaacaaaaaagagatcattttgttga
gi|12 : tatcatctatatacaatctgatcttgccgcgcatgtcaagcctagtcagttagcctaaggtaatatagtccccgatgtccaatgcattttttaaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttctccGGCA-C-AAT-------AC--------TGTACATC---CATAT-GACACGG--TGC-----G----T-A---CAATG-GGTCG-AACGA-TTGTCGAGAGG------CGT--GAATAGG--AGAAT---TATA-GCA-A-CGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--TGTCTATTT--------T-----AAGT--A--TT--TTATTTT----TA-AAA-ATCTACAAACTT-AGAAACTAAATA--------------TCG--------------ATCTGATCCTGCC-GC-GC-AGG--AAAGCG--T---AT---T-------------------------------------------------CCAATGCCC-AATGC-ATAATTTT-TT-AA-TCATCATTTTGAATAAAAAG
gi|13 : tT--ATT-TTCTCACAAG--T--GAAT-GGGCACGAAGAGA---A--TAA--A--CAG--ACCA-CT-CAGCAG--C-ACAA----TCAC-GCG-TTTACAA-GTA-C----G---TG-AC---A----TGTAGGCC---TATAC-AACACTACCTAC-----AAAATT-A---CTATG-GGTC-GAACGATTTGCC--GAAG-----GCGT---AATGGAGCAGACTGGATATA-ACA-CACATA-GT-G---TTAA-CC-ACAGG-C-------------TACTGAATGAAT---TCT-GTAA--GT--T-TTT-TTT--------CT----AAGT--G--TT--
gi|14 : tttgaatccatgtAAATTTGGA-CATA-TGGATAC-GCACAAAG--A-GGGAAACAT-GCC--TATTAATATNNNNNNNNNN-NNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NN---NNNN-NNN-NNNNNN-NNNNNNNNN-NNNNNNNNN-NNNN-NN--NNNN--N--N-NNNNNNN-N-NN-NNATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-Tatgagaagtaattgtctaaacaatc
gi|15 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAT-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATA-TGGGAG--TTCAAGTTTCT-ATATCA-T--GTATACATACGCAAAG-TAA---TACATTAATGTG-T-GTTTTTATTT-GTTATT-GT-TGAA-CA--GAAACTGT--AAAAAgnnnnnnnnnnnnnnnnnnnnnnnnnatat
gi|16 : AAGAAAAAAACTA--TTTCAGCAAAAGGG-AAA-CT-TTGAGGGGCTG-TA-TTG--TTTAGAGT-CCACACT-AACACAC--CCTTTTTTAGTGTTTAGA-TTGCCTTTCTAATCGAGATGAATCTGCCGAA-ATCGATTA--TTAAA
gi|17 : tttga--GGTGGACAACA-TGAAAAAGGTTCGAA-CTGTGTT-CC-AATGCACACTACCTCTAACATTTTT-TTCATT-CAAAATTAGC-AAAA-ATGTGATTCAAATTTACAG-TAACTATTTCAAAACAActagaagagaacacccttaacata
gi|18 : tG-TAGGAG--TTCAAGTTTTT-ATATCA-T--AT----ATATGCAAAA-TAG---TACATTAATGTT-T-ATTTTTGTTT-GTTACT-AT-TGAA-CA--GAAACTGT----AAAAAAAA-TCAATCA
gi|19 : AATGGG--GGAAT---TATA-GCA-A-CGTA-GG-AGC-TGAC-CC-CAGGG-CTGCTAA----AG-TATTGGGTGAAT---T-G-GTAA--GT--T-TTT-TTT--------A-----ATGT--A--
gi|2 : TCA-T--GT----AAACGCAAAA-TAG---TACATTTATGTT-T-GTTTT-GTTT-GTTATT-GT-TGAAACA---AAACTGT--AAAAAA-----TCAATCAAA-ACATGAAAATCTTTT-ACTTTTGCTCTCATTCTACTACG-CATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGT-G-AAGCAGACATGGACATTTC-GTCAGAAATTTGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA--A-GAAGAAA---AA-TAA-TA--CAG--ACTAGTTGCAGCAG-GC-ACAA----TCAC-GCG-T-----AAGCA-C-G--G---TG-AC---A----TGTA-------CAT---GACACTGT-TAC-----G----TAA---CAATG-GGTC-GAACGA-TTGCCGAGA-G-----ACGT--GAATGGG--AGAA----TATA-GCA-ATTATA-GT-GGCTTGAA--C-CAAGG-CTGTTGAT-ATAG-GTTTGAGTGAATTTGT-T-GTAA--GT--T-GTT-TCT--------AAT---AAGT--ATTTT--TTATTTT----T----A-A-----AAATCT-A-AAAC-AAATA--------------TCG-AT-ACCC-A----ATCTGATCATGCC-GCGGC-AGG--AAAGCCGGTA--AT---TAGA----CGG--------G--TA-AT-----T----AGATTCTATAGTCCTGATGTC---ATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGGGTAATG-TAGTATCAGAGTTTTT-AAAAATCAACCAACGTAAAACATGAATTTATTCATTCAAAAACGAAT-CCGA-GGT-AAATAGTATATATTC-GC--ATTTAGAGAA-A--TAAGGCGCGGCGTT-CGTGCTAAAAC--A-AA---AGATCATTTTGTT--G--TTTTATATTTC-TTG-GCTAC-TAG-AACAATGATTTTTGTTTAGCTTAACCCAGATCAGTC-TCTAGTTT-GTAATCTCCATTCATTGCGT-ACC-C--G-GTGAA-GTTATTA----TAA-TC-TGG-TT----ATG-CCTCGATTCCGTAGCAAACTTCCTTTGAT-ACCAGGAAGTA--ACATTGGATC-TACGTCCAAGGTGGCCTCATCCGGAATAAGACACATTCATGTTGGAAGTGCTG-TAAC--AATTTAGGTTTCTAAGG-CAA-CTC--AGTACTTTGTATTC-TATTCAAACAAAAATTT-GA-CATA-TGGATACGGCACAAAGAAA-GGG-AACAATGCCTGTATAAATAT--TTTGGAGTCCAGAAGGTCAAAGGTCGAATGTCACAGTGCATGGAAATTGGACAATGTTAATTTAGTTGATCGCATACTG-TTTCCA-CATAAATTCTTTCAGTGAT-AAAT-GGGCATTA-----T-TGTTTGT-A-ACAAAATTATTTATACC-TTTT-TAGAAAAT--A---GTTA-TATGATAA--AAT-AATACATAAAA-TTG-AAATATGGAATTGAAGGACAAATACATTTTATAACAATTCAT-ATATGGTAATGAGTTTGAAATTTATGACAAA-ATGAGAAGGGTTGGTGGG-GACACCAAAATGGTTTCAAAACTTTGTT-CCAAATGCACACTACCCCCAAC-TTTTTATTCATTAAAAAATGA-C-AAAATATG-GTTTCGAATCTGCAATTGGCAA-TTCACAAAAAGTTTAAATTCAGGA--TCTTGCCTATATTGAATTTTAATTGACCAAAATTTGACATAAAAATTTGGTC--ATTTTCCCCA-TAAGGAATGTAGAGTAATCTGTTA-TATATTCTAG-ATTTTTGTGAAAAAATTATCTAAAATTTCTAAAGACATT-TAAATCCATTATTAAT----------TTTCATGAAATAAAAGATAATGAAGA-ATTATTCATGTCCAGAA-TATTTGTTTT-TATTT-GCTG-TTTTGCTGTGGAAAATGGTGA-TTTTCAAGAAAACAAGTAA-TTTCGACAAAGGGGTTAA-TTCTTGGAGGGCTGTTAACTC--T---AAGTCCCGCACTAAACATACCTTTTTTCTTTGTG-TTGAA--TGCCTTTCT-GTCAAGATGAATGAG-TTAAG--GGG-TA-TTT-AAAAGTTTAATTCCAATGGAAAAATT-TCATcagagcagttgtcta
gi|20 : TTC-TATT-AAAACCAATTTTG----ATA-TAGATGC-GTACAAAA--ATGGG-AATATG-CC--TATCGAC----TTTGGGGC-CAGAAGGTCAAAAGTC-ATTGTCACAGTGC
gi|21 : -GCATTTT-ATCATTCTCACAAGGGT--GAGT-GA-CA-GAAGAAG---AA-TGATTA--CAG--AC------CAGCAA-GC-ACAAGATTTCGC-GGG-T-----AAGCACC-GGTG---TC-AT---A----CGT
gi|22 : CTGGTGGT-GATTTTT---ACC--G-CAGAGTGAGAT-C--T--ATAT-T-TTT--TATGTCGTAA-TATG-GGCA-AATG-TAGGAGTTTTC-AGTTTTT-
gi|23 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACA--G-C-GAGTTAG-T-T--TCCATA
gi|3 : taaT--ATTATTCTCACAAG--T--GAAT-GG-CA-GAAGGAG---AA-TAA-TA--CAG--ACCAGCT-CAGCAG-GC-ACAA----TCAC-GCG-TTTACAAG-TA-C-GGTG------AC---A----TGTAGGCC---TATAC-AACACTACCTACAAAATG----T-A---CTATG-GGTCG-AACGA-TTGCCGAGAGG------CGT--GAATGGG--AGAAT---TATA-TAACAGCATA-GT-GGC-TGAA-CC-CAAGG-CT-------------ACTGAATGAAT---T-T-GTAA--GT--T-TTT-TTTTAATGTAGA-----GAGT--A--------ATTGT----CT-AAA-A-----CAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-AAT----CTGGTCATG-CCAC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AAC-TATAT-----TCTATAG--TC------CCTGATGTCC-AATAC-ATCATTTA-TG-AA-TTATTATTTTGAATAAAAAGTGT-AATATAGTATCAGAATTTTT-AAAA-TC-ACCAACGTAAGCAATGAATTTATTCAAC--AAAAAGAATCCCGA-GGTAAAATAGTTTAT-C---GC--ATTTAGAGAA-A--TGTGGCGCGGCGTT-CATGCTAAAAC-GA-AA---GG-TCATTTTGTTTTAA-TTACATGTTTCTATGTGGTAC-TAG-ATCAATAA--TTTGTTT--CGG-------ATCTGT--TCTGTTTT-GTAG-ATACATCCATTTTGTAACCAC--ATG-GAATGTTA-TA-----AA-TCATGGATTCATGGTGCCATC-ATT-CG--GGAAA--TC-----AT-ACCAGGAAGTAC-GCATC---TC-T---TCGAA-GTGGGTACAT--GGAA--------------GTTG-A----CTGTTAAAATAATG--GGTTT-TAAGGAAAA-CTCA-AGTAGTTTGTATTC-TATTC-AAACCAAATTTGGA-TACA-TGGATAC-GTATAAAGA-A-GGG-AACAT-GTA--TATTA--GT--TTTGGAGT-CAGAAGGTCAAAGGAA-ATTGTCACAGTGCA-------TGGACAATATTGATTTCG-TG---GCAT-ATG-TTTCCA-CATGTATTT-TTCAGTGAT--AAT-TC--ATTA--TTAT-TGTTTGT-GTAC-TACTTATTTCTACT-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATAC--AAAATTTGCAAATAT-AAATTGAAGA--ATATGCATTTTATAACAAATCAT-ATATTGT
gi|4 : atgt-----G----T-G---TAATG-GGC--GAACGA-TT-CCGAGAGG------CGC--GAA---G--GCAAT---TA--------ATGT------GC-TCTA-C------G-TTGCTGATGATAG-TACTGAGTGAAT---T-TTATAAAGGT--T-TTT-TTT--------ATGTACAGATCAA--TTGTCTATTTTAACATACAAATA-----AAATCC-ACAAACTAAGTAAAGTTACTGGGTTATCGTATTACCC-AAT---TATGATCTTG-C-CT-CT-AGGTCAATACC--TTAGATAGCTGCAGGAGCG--------AA--TA-TC-----T----CG--TTA-----CCCGATGTCC-AATGC-TTTAGTTTATTGAA-TTATCACTTTGAATAGAAAATGA-AAT-TATTAACATAGTTTTT-AAATATC-ACGAACGAAAACAATGAATC------------AAT---TCCCGATGGTAAAATAAATCTTCT---CCCAGTTTAGAGAA-AGTTATGGCGCGGCGTTTCGTGCTGAAACCGA-A-----TATCATTTTGTT--GA-T---ATATTCCTTTGCTCTAGATAGTATCAATGT--ATTGTTT--CTTG------ATCGGTCCTCCGCTTTTGTAT-ATACATTC-TTTGATAACCACATG-G-AAAGGTTA-TA------A--CATGGATTACTAGTGTCATC-AGTC----GAAAA--TC-----ATTACCAGGAAGTACCACATC---TCGT---TCCTT-GTGGGTGCAT--GGAA--------------GTTGAC----TTGTTAAA------------------GATAATCTCAGAGTACTTTGTATTCGTATTNNNNNNNNNNNNNNNN-NNNN-NNNNNNN-NNNNNNNN--N-NNN-NNNNNNNNN--NNNNNNNNN--NNNNNNNN-NNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCT----TTAG--G---GGAT-ATG-TTTACA-CATGTATTC-TTCAGTTAT-AAAT-AA--ATTA-----T-TGTTT----------ATTATTTAT-CC-TTCTATAGACAAT--AT--GTTAGTATGATAA--tgt
gi|5 : aa-AA-TCATCATTTTGAATAAAAAG-GT-ATT-TAGT-TCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGA-TCCCGA-GGTAAA-TAGTTTATATATCGC--ATTTAGAGAA----TATGGCGCGGCGTT-CGTGCTAAA-C-GA-A-----GATCATTTTGTT--GA-TTTTATATTT--TTGCGCTAC-TAG-ATCAATAAA-TTTGTTT--CTT-------ATCG--T-TCTGCTTT-GTAG-ATACATCCATTT-GTAACCAC--A-G-GAATGTTA-TAAATCTAAATCATGGATTCATGGTC-CATC-ATTCCG--GAAA---TC-----AT-AC-AGGAAGTAC-ACATC---TC-T---TCCAA-GTGGTTGCAT--GGAA--------------GTTGA-----CTGTTAAA--A-TT--GGTTTCTAGAGATAA-CTCA-AGTACTTTGTATTC-TATTCAAA-CAAAATTTGGAACATAATGGATAC--TACAAA---A-GGG-AA-ATG--C--TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATGTT-ATTTAG-TG---GCAT-TTG-TTTCCA-CATGTATTC-TTCAGTAATAAAAT-GA--ATTA--T--TATGTTTGTAA-AC-AAATTA-TTATACCTTTTT-TAGACAGT--AT--GTTA-TATGATTATTAATAAATACATAAAATTTGTAAATAT-GAATTG-AGA--AAATACATTTTAT-ACAAATCAT-ATATTGT-ATTGAGTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAAT-GGTTCAAAACTTTATT-CC-AATGCACA-TA--CCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATAT--GTTTCGAATCTGCAta
gi|6 : GGGTGT-ACTCTGGTGGC-GATTTTTTACACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTAATATGTCGTAAATATG-GGCA-AATG-TAG-AG--TTCAAGTTTTT-ATATCA-T--GTC---ATACGCAAA--TAG---TACATTAATGTT-T-GTTTT-GTTT--TTATTAGA-TGAA-CA--GAAACTGT--ACAAAA-----TCAATCAAA-ACATGAAAAATTTTTCACTTTTGCTCTCATTCTAC----TCATAC--AATGATGAC-TATAC-AAATG--TAAACAA---ACTCA-CGACT-GAAC--TTGGA-TG--TAC-TC-GC-CA--AACATTTC--ACATTTAG-T-CTAGGGTTATA-TTGGGG-AAGCAGACATGGATTTTTCCGTCAGAAATTAGGCT-GCATCT--ATT-TTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACTAGTTGCAGC-G-GC-ACAA----TC-C-GCG-TTTGCAAGCCA-A-CGTGA--TGTAC--------TGTAGGCCA--TACA--AACACTG--TAC-----G----T-A---CAATG-GA-----------TGCCGAGA-G-----ACGT--GAATGGG--AGAAT---TATA-GC---ACGTA-GTGGGC-TGAAGCC-CAAGG-ATGTTGAT-ATAGTTTCTGAGTGAAT---T-TGGTAA--GT--TGTCT-ATT--------------AAGT--AT-TT--TTATTTT--------AA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-A----ATCTGATCATG-C-GC-GCAAGG--AAAGCC-------------------CGGT------AAATTAGATTTCTAT----AG--TC------CCTGATGTCCTAATGC-A
gi|7 : gaatttaGGTGTCACTCTGGTGGTAGATTTTT---ACCACG-C-GAGTGAG-T-CACTCCATAC-TATTTA-TTTGTCGTAAATATGCGGCACGATGGTAGGAG--TTCAACTTTTTTAT-TCAGTAAGT----AGACGCAAAAATAAGTTTACATTA-TGTT-T-GTTTTTGTTTTGTTATT-GTATGAA-CA--GAAACTCT--AAAA---AAA-TCAATCAAACACATGAAAATCATTTTAC-TTAGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCGACG-CT-GAAC---TGGAATG--TACTTC-GCACAAAAACATTTCAAACATTTAGAT-CTAGGGT-ATATTTGTGA-AAGCAGACATGGACATTTCGGTCAGAAATTA-GCTGGCATCTAAATTTTGCTCAC-AG--T--GAGTGGA-CA-GAAGGAATATAA-TAA-TACTCAGGCACCAGCTGCAGCAGCGCAACAA----TCAC-GCGTTTTACAA-ACA-C-TCCG---TG-ACAAAA----TGTAGGTCCCGCATA--CAAACTG--TAC-----G----T-A---CAATA-GGTCG--ACGA-TTGCCGAAGAC-----GCGTAGAAATGGGC-AGAAT---TCTA-GGC-AACGTACGT-GGC-TGAA-CCGCAAGG-CTGTTGAT-ATAG-TTCTGAGTGAAT---T-T-GTAA--GTTGT-TCT-ATT--------T-----AAGT--A--TT--TTATTTT----T---TA-A-----AAATCTAACAAAATAAATA--------------TCG-AT-
gi|8 : agtCTCTGGTGGT-GATTTTTT--ACA--GGC-GAGTGAG-TTC--TCCATACCT-TTTA-TTTGTCGTAA-TATG-GGCA-AATG-TAGGAG--TTCAACTTTTT-ATATCA-T--GT----ACACGCAAAA-TAG---TACATTAATGTTATAGTTTTTGTTT-GTTA-T-GT-TGAA-CAAGAAAACTCT--AAAAAAAAAATTCAA-CAAA-ACATGAAAATCTTTTTACTTTTGCTCTCA-TCTAC---GTCATACAAAATGATGACGTAT-CAAAATGCTTAAACAAGGGACGCG-CG-CTAGAACTTTTTGAATGTTTAC-TCAGC-CACTAACA-TTC--ACA-TTAG-TCCTAGGGT-ATA-TTGTGACCAGCAG-CATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATATTTCTCACAAG--TTGAAGT-GACCA-GAAGAAA---AATTAA-TA--CAG--ACCACTTGCAGCAG-GC-ACAA----TCACGGCGTTTTACAA-ACA-C---TG---TG-AC---A----TGTAGGCC---CATGACAACACTG--TAC-----G----T-A---CAATG-GGTC-GAACGATTTGCCGAGA-G-----ACGTG-GAATGGG--AGAAT---TCTATGCA-AGCGTA-GT-GGC-T
gi|9 : ATTTCACAAAAAGTTTAA-TTCAGGAACTCTTG-ATAGATTGAATTTT--TTGA-CAAAATCTGACTTAAAATTTGTGTCAT-TTCTCCCCAATAATG-CT--AGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAGAT-TAGGATTAAT----------TTTCATGAAATAACAGATAATGA--AGATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCAAG--AAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--CTTTTTCTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAG-TTCAGATAGGTTA-TTCAAAAAGTTTAATT-CAATGAAAAAATT-TCATTTCACCAGAG-AACATCCTTAA
blockSeqs : C A TAC AC G A A T AC TA A A C C G TT T G AA ATAC AA GTT A A T T A A A AGA . AAAAT C T CA TACG AA A A CT GGG A A A TTT TT T A A CA AA AT A C T T GAC C G AA A GG TG G G C TAT T T CT GC G G C A GATT G TTT GG C TCCGTGACAAAA CCG AC CC AAAATG A . . G T AGG AG GC GGA T ACAG C G T G G . TG T TTG C T AG TG G A TAATGTAGA CA TT GT AACATACAAATA A AAGTTACTGGGTTA T T AAT T CC G A TC GGTAATTAGACGGGTAATTAGATTCTATAGT T . A G . G A ATA . A T CA A T AT TA A A ATCGC AGT T CG . AAAGA TT . TT T T A T TT AG AACCCAG CC T T C ACATG T T T AAATCT AT AT CA C G CGTA ACT CTTTG T C GGA G ACG G CC TAAGACACATTCAT GAAGTG AATTTA C T AG G CA C A A A G GAA T A C TGCCTG A A NN C G N N N N NN TTGATC AC . . T AA GGGC TTA A N AACAA T A . . G A TT A A T C G A AC C T A . A . A TT G C CC A A . A C C A A A A G . T GT T T A A A A C AA C A AT A AATGTAGAG T TA A T T A AC A C NGTGATTAAT AGA A A A T T C . G . G AC T A C T CT C A CT T T G C GA TT C T ATG C A
blockSeqs : . . T . . . . . . CT . A . . . . . . . C G . . . T . . . . G . AAAA . T TA GT . . . . . . . . T . . . . AA . AT . . . . GG G . T A . . . C . . . . . . G G . . . . TTT AG . CGTGATGTAC A T CC AAAAT . . . G T ACG G C . . ACA . . . . . . T . . . G . . G . ATGTAC . T . TAAAAATCTAC . . . . AAT C CC . . T TTAGATAGCTGCAGGAGCGAATATCTCGTTA . . . . . T . TG . . A . A . AT TT A C TCGC A . A . AA . . TA T C . . A . G C . . T ACAT . G . AT T AT AC T . CG A . . . . . . . . . AC ATAATG C . A . NN A . . A . GA . . C NNNN A A . . . A T G G TA NN N . . . N NN N . G GTACT . . . . . A . A A T T . A . C T A . . . A . G . T G A . . C C . . . A G . T G . T A A . . . . . A A . CTAGA T T A . T A . A . . AT . . A . . . . . . A AC . . . . . . . . T T A C GA T . T TT T .
blockSeqs : . . . . . . . . . T . A . . . . . . . . A . . . T . . . . G . AAA . A TA GT . . . . . . . . T . . . . CT . AT . . . . GA . . . A . . . . . . . . . . G G . . . . TT AG . GGTGTCATA . C T G . . . G . GG . . . . AAT . . . . . . T . . . . . . . . AAT . . . CTAAAA . . . . AAT A CC . . . TAGTCAGTTAGCCTAAGGTAATATAGTC . . . . . T . AT . . T . . . AT AT T A CCCA A . G . AG . . TT . C . . . . . T . . G ACA . T . A T AT CA . . CG A . . . . . . . . . A ATT . . A . CA A . . G . G . . T GCC A G . . . T N G A TG TG A . . . A TC T . G AAACA . . . . . A . . . . . . . . C T . . . G . C . . . . . . . . . A . . . . . A . T . . T A . . . . AG . . . . . . . . . A A . . . . . . . . T T G . A T . T TT
blockSeqs : . . . . . . . . . T . . . . . . . . . . A . . . T . . . . G . . . T A T . . . . . . . . . . . . . . . A . . . . G . . . T . . . . . . . . . . G G . . . . TT GC . GGTGACA . C . G . . . G . GA . . . . CAA . . . . . . T . . . . . . . . CT . . . TTAA . . . . AA A CC . . . TATTCGGTAACTATATTCTATAGTC . . . . . . . TT . . . . . . T TT A . GC A . G . . . . . . . . . . . . . . . . CG . . . A . T . . . . . . . . . . . . . . A . . . . . A N . . A . A . . C GCC N N . . . T T N C T TG A . . . A AA . . G NNNN . . . . . T . . . . . . . . . . . C . . . G .
blockSeqs : . . . . . . . . T . . . . . . . . . . A . . . . . . . . G . . . . T . . . . . . . . . . C . . . . . TT G . GGTGACA . . . G . . . G . GG . . . . AAG . . . . . . T . . . . . . . . T . . . TAA . . . . AA T C . . . CGGTAAATTAGATTTCTATAGTC . . . . . . . . . . . . . C . . . N . N . . N GTA A A . . . N . G G . G T . . . . GA . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T G . TGTGACA . . . G . . . G . GG . . . . AA . . . . . . . . . . . . . . . A . . . AAA . . . . A A C . . . TATT . . . . . . A . . . . . GC . . . . . A
blockSeqs : . . . . . . . . . . . . . . . . . . T A . GTGACA . . . G . . . G . GA . . . . AA . . . . . . . . . . . . . . . T . . . . . .
blockSeqs : A . AATAC G . . . . . GA . . . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . . . A . . .
blockSeqCons : ** AAA** TA AT GG* TT* NGTGACA************** *** G* GG****** TTAA************* AAT**** CC* AT TT CCGC*** A*** C* ACGT** AT CG** A***** ATTG**** GCC*** TG**** NA*** T**** ** ** T*
originalCons : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATG-TAGGAG--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAA-CA--GAAACTGT--AAAAAAAAAA-TCAATCAAA-ACATGAAAATCTTTTTACTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGTGG-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCG-TTTACAAGGCA-C-GGTG---TG-AC---A----TGTAGGCC---CATA--AACACTG--TAC-----G----T-A---CAATG-GGTCGGAACGA-TTGCCGAGAGG-----GCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--T-TCT-TTT--------A-----AAGT--A--TT--TTATTTT----TA-AAA-A-----AAATCT-ACAAACTAAATA--------------TCG-AT-ACCC-AAT--ATCTGATCNTG-C-GC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AA--TA-AT-----T----AG--TC------CCCGATGTCC-AATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGNGT-ATT-TAGTATCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAAATAGTTTATAT---GC--ATTTAGAGAA-A--TATGGCGCGGCGTT-CGTGCTAAAAC-GA-AA---GGATCATTTTGTT--GA-TTTTATATTTCTTTGCGCTAC-TAG-ATCAATAA--TTTGTTT--CTT-------ATCGGTC-TCTGCTTT-GTAG-ATACATCCATTTCGTAACCAC--G-G-GAATGTTA-TA----TAA-TCATGGATTCATGGTG-CATC-ATTCCG--GAAAA--TC-----AT-ACCAGGAAGTAC-ACATC---TC-T---TCCAA-GTGGGTGCAT--GGAA--------------GTTGAA----CTGTTAAA--AATT--GGTTTCTAAGGATAA-CTCA-AGTACTTTGTATTC-TATTCAAAACAAAATTTGGA-CATA-TGGATAC-GTACAAAG--A-GGG-AACATGGCC--TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATNTTAATTTAG-TG---GCAT-NTG-TTTCCA-CATGTATTC-TTCAGTGAT-AAAT-GA--ATTA--T--T-TGTTTGT-A-AC-AAATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATACATTTTATAACAAATCAT-ATATTGTAATTGATTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAATGGGTTCAAAACTTTGTT-CC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATATG-GTTTCGAATCTGCAG-TAGCAATTTCACAAAAAGTTTAAATTCAGGAACTCTTG-CTAGATTGAATTTT--TTGA-CAAAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTGTAGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCAAGGAAAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTA-TTTAAAAAGTTTAATT-CAATGAAAAAANT-TCATCTCACCAGAG-AACATCCTTAAG
finalCons : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATG-TAGGAG--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTGTTT-GTTATT-GT-TGAA-CA--GAAACTGT--AAAAAAAAA--TCAATCAAA-ACATGAAAATCTTTTTACTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGTGG-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCGTT-TACAAGGCA-CNGTGACA--------------TGTAGGCC---CATA--AACACTG--TAC-----G----T-A---CAATG-GGTCG-AACGA-TTGCCGAGAGG------CGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGG-CTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--T-TCT-TTT--------A-----AAGT--A--TT--TTATTTTTTAA-------------AAATCT-ACAAACTAAATA--------------TCG-AT-ACCCAAT----TCTGATCNTGCC-GC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AA--TA-AT-----T----AG--TC------CCCGATGTCC-AATGC-ATCATTTT-TT-AA-TCATCATTTTGAATAAAAAGNGT-ATT-TAGTATCAGAGTTTTT-AAAAATC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAAATAGTTTATATCCGC---ATTTAGAGAAA---TATGGCGCGGCGTT-CGTGCTAAAAC-GA-AA---GGATCATTTTGTT--GA-TTTTATATTTCTTTGCGCTAC-TAG-ATCAATAA--TTTGTTT--CTT-------ATCGGTC-TCTGCTTT-GTAG-ATACATCCATTTCGTAACCACGT--G-GAATGTTA-TA----TAA-TCATGGATTCATGGTG-CATC-ATTCCG--GAAAA--TC-----AT-ACCAGGAAGTAC-ACATC---TC-T---TCCAA-GTGGGTGCAT--GGAA--------------GTTGA-----CTGTTAAAATTG----GGTTTCTAAGGATAA-CTCA-AGTACTTTGTATTC-TATTCAAAACAAAATTTGGA-CATA-TGGATAC-GTACAAAG--A-GGG-AACATGCC---TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATNTTAATTTAGTG----GCAT-NTG-TTTCCA-CATGTATTC-TTCAGTGAT-AAATNA---ATTAT----T-TGTTTGT-A-AC-AAATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATACATTTTATAACAAATCAT-ATATTGTAATTGATTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAATGGGTTCAAAACTTTGTT-CC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAAATGAGC-AAAATATG-GTTTCGAATCTGCAG-TAGCAATTTCACAAAAAGTTTAAATTCAGGAACTCTTG-CTAGATTGAATTTT--TTGA-CAAAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTGTAGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAATTATGTAAAAGTTATAAAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TG-TTTC-TTGTGGAAAATGGTGA-TTTTCAAGGAAAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--TTTTTCTTTGTGTTTGAAT-TGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTA-TTTAAAAAGTTTAATT-CAATGAAAAAANT-TCATCTCACCAGAG-AACATCCTTAAG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111
lowQualScore : 111 1111 111 222222 11111 11 11 111 111 11 11 1 11 1 11 1 1111 1 11 11111111111 22222222 111 22 11 1111111111 111111 11 44444444444444 2222222222 22222222 22222222222222 33333 11 22222222222222222222222222222222222222222222222222222222 1 11 222222 1111 22222 11 11 3333333 22 1 222 1111111111 1 2222 111 22222 111 111 11 44444444444444 2222222 22222 111 111 1 111111 11111 22222 1111111 11 1 11 1 1 11 11 11 2 1 1 1 11 11 1 2 1 11 1 111 1 222222222 11 1 1 111 1 4444444444 2222 1 1 1 1 1 111 1 11 11 1 1 111 1
lowQualScore : 8 5 555 77 5 5 5 5 77 888 6 7 6 6 5 77 5 5 77 7777 0 55 000 5 5 5 5 0 5 5 5 999 5 666666 8 1 44 0 0 44444 11 8 8 11 444 8 8 8 111 0 11 8 8 8 66 0 11 0 8 8 8 8 44 0 6 6 11 9 66 66 5 0 5 888 5 5 66 66 0 2 5 5 5 0000 5 0 66 22 33333333333 4 33333333 0 333 11 88 4444444444 4 777 4 1 4 8 4 222222 00 99 777 4 9999 4 4 4 4 4 66 66 4 777 4 8 66 66 8 4 22222222222222 66 999 5555555555 77 77 5 00000000 99999999999999 5 5 11111 1 8888 33 55555555555555555555555555555555555555555555555555555555 5 5 6 5 5 8 6 4 0 0 8 8 0 1 11 5 8 0 11 22 333333 6 5555 0 6 77 6 22222 99 8888 5 3 8 8 0 99 11 4444444 11 8 8 0 1 000 11 9999999999 88 0 0 666 6 8 1111 111 00000 8 8 0 444 8 444 8 11 77777777777777 2222222 8 00000 3 5 8 0 8 88 6 11 4 0 5 5 1 5 444 5 5 66 5 000 3 1 77 5 0 5 1 2 2 1 1 999999 77 6 6 6 77 66666 77777 6 2 9999999 6 6 99 99 6 1 11 3 3 3 7 0 3 33 2 3 3 0 7 3 7 33 66 66 6 3 0 2 2 0 0 0 3 2 33 22 3 3 3 3 7 3 88 3 7 333 3 333333333 3 33 3 0 0 3 777 3 0 3333333333 4444 0 0 3 0 0 0 444 0 0 6 55 8 8 8 8 0 11 0 8 8 11 3 0 88 3 3 44 0 88 0 0 3 444 3 3
lowQualScore : . . ... .. . . . . .. ... . . . . . .. . . .. .... . .. ... . . . . . . . . ... . ...... . . .. . . ..... .. . . .. ... . . . ... . .. . . . .. . .. . . . . . .. . . . .. . .. .. . . . ... . . .. .. . . . . . .... . . .. .. ........... . ........ . ... .. .. .......... . ... . . . . . ...... .. .. ... . .... . . . . . .. .. . ... . . .. .. . . .............. .. ... .......... .. .. . ........ .............. . . ..... . .... .. ........................................................ . . . . . . . . . . . . . . .. . . . .. .. ...... . .... . . .. . ..... .. .... . . . . . .. .. ....... .. . . . . ... .. .......... .. . . ... . . .... ... ..... . . . ... . ... . .. .............. ....... . ..... . . . . . .. . .. . . . . . . ... . . .. . ... . . .. . . . . . . . . ...... .. . . . .. ..... ..... . . ....... . . .. .. . . .. . . . . . . .. . . . . . . . .. .. .. . . . . . . . . . . .. .. . . . . . . .. . . ... . ......... . .. . . . . ... . . .......... .... . . . . . . ... . . . .. . . . . . .. . . . .. . . .. . . .. . .. . . . ... . .
lowQualScore : 0 7 777 99 7 7 7 7 99 777 7 3 7 7 7 99 7 7 99 9999 3 99 000 7 7 0 7 1 7 7 7 666 0 222222 0 4 66 8 8 88888 00 0 0 00 000 0 0 0 888 8 00 0 0 0 00 8 00 6 0 0 0 0 44 8 0 7 99 8 99 99 0 0 0 888 0 0 99 99 2 5 6 0 0 6666 0 0 44 11 22222222222 4 11111111 2 888 99 88 1111111111 4 888 4 9 4 9 4 888888 66 55 000 0 3333 0 0 0 4 4 33 22 4 888 4 9 11 11 9 4 77777777777777 11 333 0000000000 99 99 7 77777777 44444444444444 0 0 11111 0 0000 66 00000000000000000000000000000000000000000000000000000000 7 7 7 7 7 8 0 0 8 8 0 0 8 0 00 6 0 8 66 00 111111 7 0000 3 7 77 7 77777 22 6666 6 2 0 0 8 00 00 0000000 22 0 0 8 4 222 88 2222222222 88 8 8 444 0 0 0000 888 00000 0 0 8 000 0 000 0 00 00000000000000 0000000 0 88888 2 0 2 8 0 88 7 00 8 7 7 7 6 7 666 7 7 77 7 111 1 6 99 7 3 7 3 5 0 0 5 333333 77 7 7 7 55 00000 33333 7 8 5555555 7 7 22 22 7 4 00 2 2 2 0 0 2 88 5 2 2 0 3 3 3 88 55 55 5 2 0 5 5 0 0 0 2 5 22 55 3 2 2 7 3 3 33 3 3 777 3 777777777 2 22 2 0 0 2 000 2 0 8888888888 8888 0 0 2 0 0 0 000 0 8 4 88 0 0 0 0 8 00 8 0 0 00 8 8 88 2 2 00 8 88 8 0 2 222 7 3
consensus : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATG-TAGGAG--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTG-TTTGTTATT-GT-TGAA-CA--GAAACTGTAAAAAAAAA---TCAATCAAA-ACATGAAAATCTTTTTACTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGTGG-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCG-TTTACAAGGCA--CGG------TG-AC---A----TGTAGGCC---CATA--AACACTG--TAC-----G----T-AC---AATG-GGTCG-AACGA-TTGCCG-AGAGG------CGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGGC-TGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--T-TCT-TTT--------A-----AAGT--ATTTTAT-TTTTTAA----------A--AA--TCT-AC--------AAACTAAATA--------------TCG-AT-ACCCAA--T--TCTGATCNTGCCGC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AA--TA-AT-----TAG--TC------CCCGATGTCC-AATGCA-TCATTTT-TT-AA-TCATCATTTTGAATAAAAAGNGTAATNTAGTATCAGAGTTTTTAAAAA-TC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAAATAGTTTATAT-CCGCA-TTTAGAGAA-A--TATGGCGCGGCGTT-CGTGCTAAAAC-GA-AA---GGATCATTTTG--TTGATTTT-ATATTTCTTTGCGCTAC-TAG-ATCAATAA--TTTGTTT--CTT-------ATCGGTC-TCTGCTTT-GTAG-ATACATCCATTTCGTAACCACGTGGAATGTTA-TA----TAA-TCATGGATTCATGGTG-CATC-ATTCCG--GAAAA--TC-----AT-ACCAGGAAGTAC-ACATC---TC-T---TCCAA-GTGGGTGCAT--GGAA--------------GTTG-----A-C-TGTTAAAA-T--TGGGTTTCTAAGGATAA-CTCA-AGTACTTTGTATTC-TATTCAAAACAAAATTTGGA-CATA-TGGATAC-GTACAAAG--A-GGG-AAC-ATG-CC--TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATGTTAATTTAG-TG---GCAT-NTGTTT-CCAC-ATGTATTC-TTCAGTGAT-AAATG-A--ATTA--T--T-TGTTTGT-A-AC-AAATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATACATTTTATAACAAATCAT-ATATTGTAATTGATTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAATGGGTTCAAAACTTTGTTCC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAAATGAGCAAAA-TATG-GTTTCGAATCTGCAG-TAGCAATTTCACAAAAAGTTTAA-TTCAGGAACTCTTG-CTAGATTGAATTTT--TTGA-CAAAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTGTAGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAA-TTATGTAAAAGTTATAAAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TGTTT-C-TTGTGGAAAATGGTGA-TTTTCAAGGAAAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTA-TTTAAAAAGTTTAATT-CAATGAAAAAANT-TCATCTCACCAGAG-AACATCCTTAAG
Reference ( family-488 ) : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATG-TAGGAG--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATTAATGTT-T-GTTTTTG-TTTGTTATT-GT-TGAA-CA--GAAACTGTAAAAAAAAA---TCAATCAAA-ACATGAAAATCTTTTTACTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGTGG-AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-GCG-TTTACAAGGCA--CNG------TG-AC---A----TGTAGGCC---CATA--AACACTG--TAC-----G----T-AC---AATG-GGTCG-AACGA-TTGCCG-AGAGG------CGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGGC-TGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--T-TCT-TTT--------A-----AAGT--ATTTTAT-TTTTTAA----------A--AA--TCT-AC--------AAACTAAATA--------------TCG-AT-ACCCAA--T--TCTGATCNTGCCGC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AA--TA-AT-----TAG--TC------CCCGATGTCC-AATGCA-TCATTTT-TT-AA-TCATCATTTTGAATAAAAAGNGT-ATTTAGTATCAGAGTTTTTAAAAA-TC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAAATAGTTTATAT-CCGCA-TTTAGAGAA-A--TATGGCGCGGCGTT-CGTGCTAAAAC-GA-AA---GGATCATTTTG--TTGATTTT-ATATTTCTTTGCGCTAC-TAG-ATCAATAA--TTTGTTT--CTT-------ATCGGTC-TCTGCTTT-GTAG-ATACATCCATTTCGTAACCACGTGGAATGTTA-TA----TAA-TCATGGATTCATGGTG-CATC-ATTCCG--GAAAA--TC-----AT-ACCAGGAAGTAC-ACATC---TC-T---TCCAA-GTGGGTGCAT--GGAA--------------GTTG-----A-C-TGTTAAAA-T--TGGGTTTCTAAGGATAA-CTCA-AGTACTTTGTATTC-TATTCAAAACAAAATTTGGA-CATA-TGGATAC-GTACAAAG--A-GGG-AAC-ATG-CC--TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATNTTAATTTAG-TG---GCAT-NTGTTT-CCAC-ATGTATTC-TTCAGTGAT-AAATN-A--ATTA--T--T-TGTTTGT-A-AC-AAATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATACATTTTATAACAAATCAT-ATATTGTAATTGATTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAATGGGTTCAAAACTTTGTTCC-AATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAAATGAGCAAAA-TATG-GTTTCGAATCTGCAG-TAGCAATTTCACAAAAAGTTTAAATTCAGGAACTCTTG-CTAGATTGAATTTT--TTGA-CAAAATTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTGTAGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAA-TTATGTAAAAGTTATAAAA--ATTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TGTTT-C-TTGTGGAAAATGGTGA-TTTTCAAGGAAAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTA-TTTAAAAAGTTTAATT-CAATGAAAAAANT-TCATCTCACCAGAG-AACATCCTTAAG
gi|1 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAG-T-C--TCCATAT-A-TTTA-TATGTCGTAAATATT-TGCA-ACTG-TAGGAT--TTCAAGTTTTT-ATATCA-T--GT----ATACGCAAAA-TAG---TACATAAATGTT-T-GTTTTTG-TTTGTTATT-GT-TGAA-CA--AAAACTGTAAAAAAAAAAAATCAATCAAA-ACATGAGAATCATTTT-CTTTTGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACA----G-T-CTAGGGT-ATG-TTGTG--AAGCAGACATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACCAGCTGCAGCAG-GC-ACAA----TCAC-ACG-TT-ACAAGGCA--CAGGTGGAATGTAC---AATATTGTAGGGC---CATA--AACACTG--TAC-----A----T-ACGTCAATGTGGTCGGAACGA-TTGC-G-AGAGGACGACGCGT--GAATGGG--AGAAT---TATA-GCA-AACGTA-GT-GGC-TGAA-CC-CAAGGCCTGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GG--T-GCC-ATT--------A-----AAGT--ATTTTAT-ATTTAAA----------A--AAAATCT-AC--------AAACTAAATA--------------TCG-AT-CCCCAAATTGATCTGATCCTGC-GC-G--AGG--AAAGCC--T----T---T-------CGG-------AA--TA-AT-----TAG--TC------CCTGATGTCC-AGTGCAATTATTTT-TT-AACTCATCATTTTGAATAAAAAGGGT-ATCAAGTATCAGAGTTTTTAAAAAATC-ACCAATGTAAACAATGAATTTATTCATC--AAAATGAATCCCGA-GGTAAAA------ATGT---------TAGAGAATA--TGCGGCGCGGCGTT-CATGCTAAAAC-GATAA---GGATCACTTTG--TTGATTTTTATATTTCTTTGCGCTAC-TAG-ATCAA-AA--TTTGTTC--CTT-------ATCGGT--TGTGCTTT-GTAG-ATACATCCATTTTGTAACCA-G-GGAATGT-A-T-----TAA-TCATGGAT-CATGGTG-CATC-TTTC----GAAAA--CC-----AT-ACCAGGAAGTAC-ACA-C---TC-T---TCCAA--TGGGTGCAT--GGAA--------------GTTG-----AAC-TGTTAAAA-A--TTGGTTTTTAAGGATAA-CTCA-AGTACTTGTTTTTC-TATTCAAAACAAAATTTGGA-CATA-TGGAT---GTACAAAG--A-GGA-AAC-ATGGCC--TATTATTAT--TTTGGAGT-CA-AAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTG-ACAGTTTTAATTTAG-T-----CAC-TTGTTTTCCACCACGTAATT-TTCAGTGAT-AAATGGA--ATTAATT--T-TGTTCAT-ATAC-AAATTATTTATACC-TTTT-TAGACAGTTGATTGGTTA-TATAATTA--GATAAATACATAAAATTTGTAAATAT-GAATTGAAGG--AAATA-ATTT-ATAACAAATCATCATATTGTAATTGATGTGAAATTTATGACAAAGATG-GAAGGG--GGTGGG--ACA--AAAATGGGTTCAAAACTTTGTTCCCAATGCACACTACCCCCAAC-TTTTT-TTCATT-CAAA-TGAGCAAAAATATG-ATTTCAAATCTACAG-TAGCAATTTCACAAAA-GTTTAA-TTCAGAAACTCTTG-CTAGATTGGATTTT--TTGA-CAAA-TTTGACTTAAAATTTGGGTCATATTTTCCCCA-TAATG-CTATA---TAATCTGTTATTAT---CTAGAATTTTTG-AAAAAAAATTATG-AAAAGTTATAAAA---TTATAAAT-TATGATTAAT----------TTTCATGAAATAAAAGATAATGA--A-ATTATTA-TGTCATGAA-TATTTGTTTTATA-TT-G-TGTTTTC-TTGTGGAAAATGGTAAGTTTTAAAAGAAAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTCAGGGGCTG-TAACTC--TTTAAGGT-CCGCACT-AACATAC--TTTTTC-TTGTGTTTGAATTTGCCGTTCTGGTCAAGATGAATGAGTTTAAAATGGGTTA-TTCAAAAAGTTTAATT-CAA-GAAAAAAA---------ACCAGAG-AACATCCTTAAG
gi|10 : TTATTAT-TTCTAGAATTTTTG-AAAAAAA-TTCTGTGAAAGTTATAAAA--ATTATAAAT-TATGATTAATNGTGATTAATTTTCATGAAATAAAAGATGATGA--ATATTATTC-TGTCATGAAATATTTGTTTTATA-TTTG-TGTTT-C-TTGTGGAAAATGGTGA-TTTTCA--GAAAAAAGTAACTTTCAGCAAAGAGG-TAAACT-TTGAGGGGCTG-TAACTTCTTTTAAAGT-CGCCACT-AACATAC--TTTTTCTTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAGCTTAAGATGGGTTATTTTAAAAAGTTAAATT-CAATGAAAAAAATGTCATCTCACCAGAGAAACATCATTAAG
gi|11 : A--------------TCT-AT-ATACAA--T---CTGATCTTGCCGC-GC-ATGT-CAAGCC--T---AG---T-------CAGTTAGCCTAAGGTA-ATA----TAG--TC------CCCGATGTCC-AATG----CATTTT-TT-AA-tttcatcgttattttgttatattttcag
gi|11 : tatcT-CC-CA-TATAGATAA-A--TTTAGCGCAGATTT-CGTCCTAAAAC-AA-AAAAGAGATCATTTTG--TTGAaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttctcccatatagataaatttagcgcagatttcgtcctaaaacaaaaaagagatcattttgttga
gi|12 : tatcatctatatacaatctgatcttgccgcgcatgtcaagcctagtcagttagcctaaggtaatatagtccccgatgtccaatgcattttttaaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttcGGCA--CAA------T--AC--------TGTACATC---CATAT-GACACGG--TGC-----G----T-AC---AATG-GGTCG-AACGA-TTGTCG-AGAGG------CGT--GAATAGG--AGAAT---TATA-GCA-A-CGTA-GT-GGC-TGAA-CC-CAAGGC-TGTTGAT-ATAG-TACTGAGTGAAT---T-T-GTAA--GT--TGTCTATTT--------T-----AAGT--ATTTTA--TTTTTAA----------A--AA--TCT-ACAAACTTAGAAACTAAATA--------------TCG-A-------------TCTGATCCTGCCGC-GC-AGG--AAAGCG--T---AT---T---------------------------------------------CCAATGCCC-AATGCA-TAATTTT-TT-AA-TCATCATTTTGAATAAAAAG
gi|13 : tT--ATT-TTCTCACAAG--T--GAAT-GGGCACGAAGAGA---A--TAA--A--CAG--ACCA-CT-CAGCAG--C-ACAA----TCAC-GCG-TTTACAA-GTA--C-G------TG-AC---A----TGTAGGCC---TATAC-AACACTACCTAC-----AAAATT-AC---TATG-GGTCG-AACGATTTGCCG-A-AGG------CGT---AATGGAGCAGACTGGATATA-ACA-CACATA-GT-G---TTAA-CC-ACAGGC--------------TACTGAATGAAT---TCT-GTAA--GT--T-TTT-TTT--------CT----AAGT--GTT
gi|14 : tttgaatccatgtAAATTTGGA-CATA-TGGATAC-GCACAAAG--A-GGGAAAC-ATG-CC--TATTAATATNNNNNNNNNN-NNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NN---NNNN-NNNNNN-NNNN-NNNNNNNN-NNNNNNNNN-NNNNN-N--NNNN--N--N-NNNNNNN-N-NN-NNATTATTTATACC-TTTT-TAGACAGT--AT--GTTA-Tatgagaagtaattgtctaaacaatc
gi|15 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACC--G-C-GAGTGAT-T-C--TCCATAC-T-TTTA-TATGTCGTAAATATG-GGCA-AATA-TGGGAG--TTCAAGTTTCT-ATATCA-T--GTATACATACGCAAAG-TAA---TACATTAATGTG-T-GTTTTTA-TTTGTTATT-GT-TGAA-CA--GAAACTGTAAAAAgnnnnnnnnnnnnnnnnnnnnnnnnnatat
gi|16 : AAGAAAAAAACTA--TTTCAGCAAAAGGG-AAA-CT-TTGAGGGGCTG-TA-TTG--TTTAGAGT-CCACACT-AACACAC--CCTTTTTTAGTGTTTAGA-TTGCCTTTCTAATCGAGATGAATCTGCCGAA-ATCGATTA--TTAAA
gi|17 : tttga--GGTGGACAACA-TGAAAAAGGTTCGAA-CTGTGTTCC-AATGCACACTACCTCTAACATTTTT-TTCATT-CAAAATTAGCAAAA--ATGTGATTCAAATTTACAG-TAACTATTTCAAAACAActagaagagaacacccttaacata
gi|18 : tG-TAGGAG--TTCAAGTTTTT-ATATCA-T--AT----ATATGCAAAA-TAG---TACATTAATGTT-T-ATTTTTG-TTTGTTACT-AT-TGAA-CA--GAAACTGT-AAAAAAAA---TCAATCA
gi|19 : AATGGG--GGAAT---TATA-GCA-A-CGTA-GG-AGC-TGAC-CC-CAGGGC-TGCTAA----AG-TATTGGGTGAAT---T-G-GTAA--GT--T-TTT-TTT--------A-----ATGT--A
gi|2 : TCA-T--GT----AAACGCAAAA-TAG---TACATTTATGTT-T-GTTTT-G-TTTGTTATT-GT-TGAAACA---AAACTGTAAAAAA------TCAATCAAA-ACATGAAAATCTTTT-ACTTTTGCTCTCATTCTACTACG-CATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCG-CG-CT-GAAC--TTGGAATG--TAC-TC-GC-CACAAACATTTC--ACATTTAG-T-CTAGGGT-ATA-TTGT-G-AAGCAGACATGGACATTTC-GTCAGAAATTTGGCT-GCATCT--ATTATTCTCACAAG--T--GAGT-GA--A-GAAGAAA---AA-TAA-TA--CAG--ACTAGTTGCAGCAG-GC-ACAA----TCAC-GCG-T-----AAGCA--CGG------TG-AC---A----TGTA-------CAT---GACACTGT-TAC-----G----TAAC---AATG-GGTCG-AACGA-TTGCCG-AGAGA------CGT--GAATGGG--AGAA----TATA-GCA-ATTATA-GT-GGCTTGAA--C-CAAGGC-TGTTGAT-ATAG-GTTTGAGTGAATTTGT-T-GTAA--GT--T-GTT-TCT--------AAT---AAGT--ATTTTTTATTTTTAA----------A--AA--TCT-A---------AAAC-AAATA--------------TCG-AT-ACCCAA-----TCTGATCATGCCGCGGC-AGG--AAAGCCGGTA--AT---TAGA----CGG--------G--TA-AT-----TAGATTCTATAGTCCTGATGTC---ATGCA-TCATTTT-TT-AA-TCATCATTTTGAATAAAAAGGGTAATGTAGTATCAGAGTTTTTAAAAA-TCAACCAACGTAAAACATGAATTTATTCATTCAAAAACGAAT-CCGA-GGT-AAATAGTATATAT-TCGCA-TTTAGAGAA-A--TAAGGCGCGGCGTT-CGTGCTAAAAC--A-AA---AGATCATTTTG--TTG-TTTT-ATATTTC-TTG-GCTAC-TAG-AACAATGATTTTTGTTTAGCTTAACCCAGATCAGTC-TCTAGTTT-GTAATCTCCATTCATTGCGTACCCG-GTGAA--GTTATTA----TAA-TC-TGG-TT----ATG-CCTCGATTCCGTAGCAAACTTCCTTTGAT-ACCAGGAAGTA--ACATTGGATC-TACGTCCAAGGTGGCCTCATCCGGAATAAGACACATTCATGTTGGAAGTG-C-TGTAACAATT--TAGGTTTCTAAGG-CAA-CTC--AGTACTTTGTATTC-TATTCAAACAAAAATTT-GA-CATA-TGGATACGGCACAAAGAAA-GGG-AACAATG-CCTGTATAAATAT--TTTGGAGTCCAGAAGGTCAAAGGTCGAATGTCACAGTGCATGGAAATTGGACAATGTTAATTTAGTTGATCGCATACTGTTT-CCAC-ATAAATTCTTTCAGTGAT-AAATG-GGCATTA-----T-TGTTTGT-A-ACAAAATTATTTATACC-TTTT-TAGAAAAT--A---GTTA-TATGATAA--AAT-AATACATAAAA-TTG-AAATATGGAATTGAAGGACAAATACATTTTATAACAATTCAT-ATATGGTAATGAGTTTGAAATTTATGACAAA-ATGAGAAGGGTTGGTGGG-GACACCAAAATGGTTTCAAAACTTTGTTCCAAATGCACACTACCCCCAAC-TTTTTATTCATTAAAAAATGA-CAAAA-TATG-GTTTCGAATCTGCAATTGGCAA-TTCACAAAAAGTTTAAATTCAGGA--TCTTGCCTATATTGAATTTTAATTGACCAAAATTTGACATAAAAATTTGGTC--ATTTTCCCCA-TAAGGAATGTAGAGTAATCTGTTA-TATATTCTAG-ATTTTTGTGAAAAAA-TTATCTAAAATTTCTAAAGACATT-TAAATCCATTATTAAT----------TTTCATGAAATAAAAGATAATGAAGA-ATTATTCATGTCCAGAA-TATTTGTTTT-TATTT-GCTGTTT-TGCTGTGGAAAATGGTGA-TTTTCAAGAAAACAAGTAA-TTTCGACAAAGGGGTTAA-TTCTTGGAGGGCTGTTAACTC--T---AAGTCCCGCACTAAACATACCTTTTTTCTTTGTG-TTGAA--TGCCTTTCT-GTCAAGATGAATGAG-TTAAG--GGG-TA-TTT-AAAAGTTTAATTCCAATGGAAAAATT-TCATcagagcagttgtcta
gi|20 : TTC-TATT-AAAACCAATTTTG----ATA-TAGATGC-GTACAAAA--ATGGG-AAT-ATG-CC--TATCGAC----TTTGGGGC-CAGAAGGTCAAAAGTC-ATTGTCACAGTGC
gi|21 : -GCATTTT-ATCATTCTCACAAGGGT--GAGT-GA-CA-GAAGAAG---AA-TGATTA--CAG--AC------CAGCAA-GC-ACAAGATTTCGC-GGG-T-----AAGCAC-CGG------TG-TC---A----T
gi|22 : CTGGTGGT-GATTTTT---ACC--G-CAGAGTGAGAT-C--T--ATAT-T-TTT--TATGTCGTAA-TATG-GGCA-AATG-TAGGAGTTTTC-AGTTTTT-acgt
gi|23 : GGGTGT-ACTCTGGTGGT-GATTTTT---ACA--G-C-GAGTTAG-T-T--TCCATA
gi|3 : taaT--ATTATTCTCACAAG--T--GAAT-GG-CA-GAAGGAG---AA-TAA-TA--CAG--ACCAGCT-CAGCAG-GC-ACAA----TCAC-GCG-TTTACAAG-TA--CGG------TG-AC---A----TGTAGGCC---TATAC-AACACTACCTACAAAATG----T-AC---TATG-GGTCG-AACGA-TTGCCG-AGAGG------CGT--GAATGGG--AGAAT---TATA-TAACAGCATA-GT-GGC-TGAA-CC-CAAGGC--------------TACTGAATGAAT---T-T-GTAA--GT--T-TTT-TTTTAATGTAGA-----GAGT--A----AT-TGTCTAA----------AACAA--TCT-AC--------AAACTAAATA--------------TCG-AT-ACCCAA-----TCTGGTCATGCCAC-GC-AGG--AAAGCC--T---AT---T-------CGGT------AAC-TATATTCTA-TAG--TC------CCTGATGTCC-AATACA-TCATTTA-TG-AA-TTATTATTTTGAATAAAAAGTGTAATATAGTATCAGAATTTTT-AAAA-TC-ACCAACGTAAGCAATGAATTTATTCAAC--AAAAAGAATCCCGA-GGTAAAATAGTTTAT----CGCA-TTTAGAGAA-A--TGTGGCGCGGCGTT-CATGCTAAAAC-GA-AA---GG-TCATTTTGTTTTAATTAC-ATGTTTCTATGTGGTAC-TAG-ATCAATAA--TTTGTTT--CGG-------ATCTGT--TCTGTTTT-GTAG-ATACATCCATTTTGTAACCACATGGAATGTTA-TA-----AA-TCATGGATTCATGGTGCCATC-ATT-CG--GGAAA--TC-----AT-ACCAGGAAGTAC-GCATC---TC-T---TCGAA-GTGGGTACAT--GGAA--------------GTTG-----A-C-TGTTAAAA-TAATGGGTTT-TAAGGAAAA-CTCA-AGTAGTTTGTATTC-TATTC-AAACCAAATTTGGA-TACA-TGGATAC-GTATAAAGA-A-GGG-AAC-ATG-TA--TATTA--GT--TTTGGAGT-CAGAAGGTCAAAGGAA-ATTGTCACAGTGCA-------TGGACAATATTGATTTCG-TG---GCAT-ATGTTT-CCAC-ATGTATTT-TTCAGTGAT--AATT-C--ATTA--TTAT-TGTTTGT-GTAC-TACTTATTTCTACT-TTTT-TAGACAGT--AT--GTTA-TATGATAA--AATAAATAC--AAAATTTGCAAATAT-AAATTGAAGA--ATATGCATTTTATAACAAATCAT-ATATTGT
gi|4 : atgt-----G----T-GT---AATG-GG-CG-AACGA-TT-CCG-AGAGG------CGC--GAA---G--GCAAT---TA--------ATGT------GC-TCTA-C------GT-TGCTGATGATAG-TACTGAGTGAAT---T-TTATAAAGGT--T-TTT-TTT--------ATGTACAGATCAATTGTCT-ATTTTAACATACAAATAA--AA--TCC-AC--------AAACTAAGTAAAGTTACTGGGTTATCGTATTACCCAA--T--TATGATCTTGCCTC--T-AGGTCAATACC--TTAGATAGCTGCAGGAGCG--------AA--TA-TC-----TCG--TTA-----CCCGATGTCC-AATGCT-TTAGTTTATTGAA-TTATCACTTTGAATAGAAAATGA-AATTATTAACATAGTTTTTAAATA-TC-ACGAACGAAAACAATGAATC------------AAT---TCCCGATGGTAAAATAAATCTTCT-CC-CAGTTTAGAGAA-AGTTATGGCGCGGCGTTTCGTGCTGAAACCGA-A-----TATCATTTTG--TTGAT----ATATTCCTTTGCTCTAGATAGTATCAATGT--ATTGTTT--CTTG------ATCGGTCCTCCGCTTTTGTAT-ATACATTC-TTTGATAACCACATGGAAAGGT--TA----TAA--CATGGATTACTAGTGTCATC-AGTC----GAAAA--TC-----ATTACCAGGAAGTACCACATC---TCGT---TCCTT-GTGGGTGCAT--GGAA--------------GTTG-----A-CTTGTTAAA-----------------GATAATCTCAGAGTACTTTGTATTCGTATTNNNNNNNNNNNNNNNN-NNNN-NNNNNNN-NNNNNNNN--N-NNN-NNN-NNN-NN--NNNNNNNNN--NNNNNNNN-NNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCT---TTAG--G---GGAT-ATGTTT-ACAC-ATGTATTC-TTCAGTTAT-AAATA-A--ATTA-----T-TGTTT----------ATTATTTAT-CC-TTCTATAGACAAT--AT--GTTAGTATGATAA--tgt
gi|5 : aa-AA-TCATCATTTTGAATAAAAAG-GT-ATTTAGT-TCAGAGTTTTTAAAAA-TC-ACCAACGTAAACAATGAATTTATTCATC--AAAATGA-TCCCGA-GGTAAA-TAGTTTATATATCGCA-TTTAGAGAA----TATGGCGCGGCGTT-CGTGCTAAA-C-GA-A-----GATCATTTTG--TTGATTTT-ATATTT--TTGCGCTAC-TAG-ATCAATAAA-TTTGTTT--CTT-------ATCG--T-TCTGCTTT-GTAG-ATACATCCATTT-GTAACCACA-GGAATGTTA-TAAATCTAAATCATGGATTCATGGTC-CATC-ATTCCG--GAAA---TC-----AT-AC-AGGAAGTAC-ACATC---TC-T---TCCAA-GTGGTTGCAT--GGAA--------------GTTG-----A-C-TGTTAAAA-T--TGG-TTTCTAGAGATAA-CTCA-AGTACTTTGTATTC-TATTCAAA-CAAAATTTGGAACATAATGGATAC--TACAAA---A-GGG-AA--ATG-C---TATTAATAT--TTTGGAGT-CAGAAGGTCAAAGGTC-AATGTCACAGTGCATGGAAATTGGACAATGTT-ATTTAG-TG---GCAT-TTGTTT-CCAC-ATGTATTC-TTCAGTAATAAAATG-A--ATTA--T--TATGTTTGTAA-AC-AAATTA-TTATACCTTTTT-TAGACAGT--AT--GTTA-TATGATTATTAATAAATACATAAAATTTGTAAATAT-GAATTG-AGA--AAATACATTTTAT-ACAAATCAT-ATATTGT-ATTGAGTTGAAATTTATGACAAA-ATGAGAAGGG--GGTGGG-GACA-CAAAAT-GGTTCAAAACTTTATTCC-AATGCACA-TA--CCCAAC-TTTTT-TTCATT-CAAAATGAGCAAAA-TAT--GTTTCGAATCTGCAta
gi|6 : GGGTGT-ACTCTGGTGGC-GATTTTTTACACC--G-C-GAGTGAG-T-C--TCCATAC-T-TTTAATATGTCGTAAATATG-GGCA-AATG-TAG-AG--TTCAAGTTTTT-ATATCA-T--GTC---ATACGCAAA--TAG---TACATTAATGTT-T-GTTTT-G-TTT-TTATTAGA-TGAA-CA--GAAACTGTACAAAA------TCAATCAAA-ACATGAAAAATTTTTCACTTTTGCTCTCATTCTAC----TCATAC--AATGATGAC-TATAC-AAATG--TAAACAA---ACTCA-CGACT-GAAC--TTGGA-TG--TAC-TC-GC-CA--AACATTTC--ACATTTAG-T-CTAGGGTTATA-TTGGGG-AAGCAGACATGGATTTTTCCGTCAGAAATTAGGCT-GCATCT--ATT-TTCTCACAAG--T--GAGT-GA-CA-GAAGAAA---AA-TAA-TA--CAG--ACTAGTTGCAGC-G-GC-ACAA----TC-C-GCG-TTTGCAAGCCA--ACG------TG-AT---GTAC-TGTAGGCCA--TACA--AACACTG--TAC-----G----T-AC---AATG-GA-----------TGCCG-AGAGA------CGT--GAATGGG--AGAAT---TATA-GC---ACGTA-GTGGGC-TGAAGCC-CAAGGA-TGTTGAT-ATAGTTTCTGAGTGAAT---T-TGGTAA--GT--TGTCT-ATT--------------AAGT--ATTTTTA-TTTTAAA----------A--AA--TCT-AC--------AAACTAAATA--------------TCG-AT-ACCCAA-----TCTGATCATG-CGC-GCAAGG--AAAGCC-------------------CGGT------AAATTAGATTTCTATAG--TC------CCTGATGTCCTAATGCA-
gi|7 : gaatttaGGTGTCACTCTGGTGGTAGATTTTT---ACCACG-C-GAGTGAG-T-CACTCCATAC-TATTTA-TTTGTCGTAAATATGCGGCACGATGGTAGGAG--TTCAACTTTTTTAT-TCAGTAAGT----AGACGCAAAAATAAGTTTACATTA-TGTT-T-GTTTTTGTTTTGTTATT-GTATGAA-CA--GAAACTCT--AAAAAAA---TCAATCAAACACATGAAAATCATTTTAC-TTAGCTCTCATTCTAC---GTCATAC--AATGATGACGTAT-C-AAATG--TAAACAA---ACGCGACG-CT-GAAC---TGGAATG--TACTTC-GCACAAAAACATTTCAAACATTTAGAT-CTAGGGT-ATATTTGTGA-AAGCAGACATGGACATTTCGGTCAGAAATTA-GCTGGCATCTAAATTTTGCTCAC-AG--T--GAGTGGA-CA-GAAGGAATATAA-TAA-TACTCAGGCACCAGCTGCAGCAGCGCAACAA----TCAC-GCGTTTTACAA-ACACTCCG------TG-ACAAAA----TGTAGGTCCCGCATA--CAAACTG--TAC-----G----T-AC---AATA-GGTCG--ACGA-TTGCCGAAGACG------CGTAGAAATGGGC-AGAAT---TCTA-GGC-AACGTACGT-GGC-TGAA-CCGCAAGGC-TGTTGAT-ATAG-TTCTGAGTGAAT---T-T-GTAA--GTTGT-TCT-ATT--------T-----AAGT--ATTTTAT-TTTTTAA----------A--AA--TCTAAC--------AAAATAAATA--------------TCG-AT-
gi|8 : agtCTCTGGTGGT-GATTTTTT--ACA--GGC-GAGTGAG-TTC--TCCATACCT-TTTA-TTTGTCGTAA-TATG-GGCA-AATG-TAGGAG--TTCAACTTTTT-ATATCA-T--GT----ACACGCAAAA-TAG---TACATTAATGTTATAGTTTTTG-TTTGTTA-T-GT-TGAA-CAAGAAAACTCTAAAAAAAAAAT-TCAA-CAAA-ACATGAAAATCTTTTTACTTTTGCTCTCA-TCTAC---GTCATACAAAATGATGACGTAT-CAAAATGCTTAAACAAGGGACGCG-CG-CTAGAACTTTTTGAATGTTTAC-TCAGC-CACTAACA-TTC--ACA-TTAG-TCCTAGGGT-ATA-TTGTGACCAGCAG-CATGGACATTTC-GTCAGAAATTAGGCT-GCATCT--ATATTTCTCACAAG--TTGAAGT-GACCA-GAAGAAA---AATTAA-TA--CAG--ACCACTTGCAGCAG-GC-ACAA----TCACGGCGTTTTACAA-ACA--CTG------TG-AC---A----TGTAGGCC---CATGACAACACTG--TAC-----G----T-AC---AATG-GGTCG-AACGATTTGCCG-AGAGA------CGTG-GAATGGG--AGAAT---TCTATGCA-AGCGTA-GT-GGC-T
gi|9 : ATTTCACAAAAAGTTTAA-TTCAGGAACTCTTG-ATAGATTGAATTTT--TTGA-CAAAATCTGACTTAAAATTTGTGTCAT-TTCTCCCCAATAATG-CT--AGA-TAATCTGTTATTAT-TTCTAGAATTTTTG-AAAAAAA-TTATGTAAAAGTTATAAAA--ATTATAGAT-TAGGATTAAT----------TTTCATGAAATAACAGATAATGA--AGATTATTC-TGTCATGAA-TATTTGTTTTATA-TT-G-TGTTT-C-TTGTGGAAAATGGTGA-TTTTCAAG--AAAAAGTAACTTTCAGCAAAGGGG-TAA-CT-TTGAGGGGCTG-TAACTC--TTTAAAGT-CCGCACT-AACATAC--CTTTTTCTTGTGTTTGAA-TTGCCTTTCTGGTCAAGATGAATGAG-TTCAGATAGGTTA-TTCAAAAAGTTTAATT-CAATGAAAAAATT-TCATTTCACCAGAG-AACATCCTTAA