lowQualScore : 222 1 11 2222222 3333 1 11 2 11111 11 1111111 1 4444 4444444444444444444444 1111111 11111 222222 33333333 11111111111 2222222222 222222 2222
lowQualScore : 555 0 11 0 6666666 0 3333 0 0 77 9 666 5 77 5 5 1 2 44444 5 66 0 88 4 777 777 6666666 4 1 4 66 0 2222 77 8888888888888888888888 4444444 5 22222 9999 444444 777 22222222 4 66 66 77777777777 1 7777777777 8 888888 0 2 3333
lowQualScore : ... . .. . ....... . .... . . .. . ... . .. . . . . ..... . .. . .. . ... ... ....... . . . .. . .... .. ...................... ....... . ..... .... ...... ... ........ . .. .. ........... . .......... . ...... . . ....
lowQualScore : 000 0 00 8 8888888 8 0000 7 8 55 3 777 7 99 7 7 7 1 55555 0 99 1 55 4 888 888 6666666 4 0 4 11 0 0000 99 1111111111111111111111 9999999 0 55555 9999 666666 888 33333333 4 11 11 22222222222 7 5555555555 0 222222 7 5 0000
consensus : ATTTGTTGCCATCTTG-TAA--GACTATTGTCG-AA-GATGAAAAAACATTTTTT--GCTTGATTGTCCT-TTATACAAACATAT-AA-GAA--AAAAGT-AT-TCA-AAAATATCCATAAT-ATT--AATCACTGT-ATC---TT---TACT--G----AA-TCC-T--CTCC-ATCTT-AGTGACTGCAA--ACGAAA--T-T---GT-----------CTTTATA-T-A---GAGA-CT-----CTT---CTTA--NG--TTA---GA-AA-CCG-AAG-C--ATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TACGCAC-CAGTATATANAGTGGCGTAGCT
Reference ( gi|3 ) : ATTTGTTGCCATCTTG-TAA--GACTATTGTCG-A--GATGAAAAAACATTTTTTTGGCTTGACTGGCCT-ATAGACAAACATAC-AA-GAA--AAAAGT-AT-TCACAAAATATCCATAAT-ATT--AATCATTGT-ATC---TT---TACT--A----AA-TTC-T--CTCC-ATCTTCAATGACTACAA--ACGAAA--T-T---G------------CTTTATA-T-A---GAGA-CT-----CTT---CTTA--GG--TTA---GA-CA-CCG-AAG-C--ATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TATGCACCCAGTATACACAGTGGCGTAGCT
gi|4 : ATTTGTTGCCATCTTG-TAA--GACTATTGTCG-A--GATGAAAAAACATTTTTTTGGCTTGACTGGCCT-ATAGACAAACATAC-AA-GAA--AAAAGT-AT-TCACAAAATATCCATAAT-ATT--AATCATTGT-ATC---TT---TACT--A----AA-TTC-T--CTCC-ATCTTCAATGACTACAA--ACGAAA--T-T---G------------CTTTATA-T-A---GAGA-CT-----CTT---CTTA--GG--TTA---GA-CA-CCG-AAG-C--ATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TATGCACCCAGTATACACAGTGGCGTAGCT
gi|7 : TTTGTTGCCAT--TG-TAA--GACTATTG-CA-AAAGAT-AAAAAACATATTTT--GATTGATTGTCCT-TGATACAGACATAT-TA--AA--AAAAGT-AT-TTA-AAAATATC-ACA-T-ATT--AATC-CTGT-ATC---TT---TACT--G----AA-TCC-T--CTCC-ATCTT--GTGACTGCAA--ACGACAT-T-T---GT-----------CATTATATT-A---GAGA-CT-----CTT---TTTA--TC--TTA---GA--A-ACG-AAG-C--ATTGTT--AC------GG
gi|9 : aaacatatTTTGTTGCCAT---GATAA--GACTATTGTCGAA--GATG-AAAAATATTCTTT--AC-TGATTGTCCT-TTATACAAACATAC-AACGAA--AAAAGT-AT-TCA-AAAGTGTCGATCATCGTT--AATC--TGTAATC---TT---TACT--AGCTGAACTCC-T--CTCC-ATCCTT-GTGACTGCAtt
gi|6 : ttcTTTGTTACCAATTGG-TAAAAGAA-ATTCT-------GTGAAAAAAC---TTTTTG--TTGCCCGTCTTTGTAAACACACATAT-GA-GAATAAAAAGT----TTAAAAATTATATATA-T-ATT-------CTGT--TC---TT---TACT--G----AA-ATC-T--CTCCAATCT---GTGACTGCAA--AGGAAA--TCT---G------------TTTT----T-A---A-------------T---CTTA--G-----A---AA--------AAG-C--A--GTTACAC------GCTT-ATAAAACTTACAAATAATATG-TA-GCA--CAGTATATAAA----CATAGCT
gi|11 : acA--GACTATTGTAG-AA-GATGAAAAA-CATTTTTC---CTTGATTGTCCT-TTATTCAAACATATGAG-GAA--AAAAGT-AT-T--CAAAAGATC--TTAT-ATT--AATC-CTGT-ATC---TT---TACT--G----AA-TCC-T--C
gi|1 : AAACATTTTT---GCTTGATTGTCCT-TTATACAAACATAT-CA-GAA--AAAAGTAAT-TCA-AAAATATTCAT-AT-ATT--AATCAATTT-A-C---TT---TACT--G----AA-TCC-T--CTCC-AT-TTGA--GACTACAA--ACGAAT--G-T---GT-----------CTTTATATT-A---GAGACCT-----CTT---TTTA------TTATATGA-AATCCGCAAG-C--ATTGTT--ACAATGCAGTAT-AT-ATA---AC--AT-T
gi|2 : -AA-GAA--TAAA-T-ATGTCA-AAAATATCTATA-T-ATTGAAATCAT-GT-ATCCACTT---TACCTGA----AG-TTCCT--CTCC-ATCTTGA--GACTACAA--ACGAAA--T-TTGGG------------TCTTATA-T-----TAGA-CT-----CTTTCTCCTA--TG--TTA---GA-AA-C---GAG-C--ATTGTT--AC------GGATAATAAAG---AC--A--TTATGATA-GCA--CAGTATAagtagacagtatatatattacatgtatatttgtgttattactgtctacagttcccattgcatggcaactaccaaccacttgctatatgtgctttattgccaataaaatgaa
gi|5 : ctcagAT-ATT--A-TCAATGT-ATC---TT---T-CT--G----AA-TCC-TCGCTCCTATTT---GTGACTACAAGCACGAAAATT-T---GTTTTTTTATTTTTTTTATA-G-A---GAGA-CTATTTATTT---TTTAATGG--TTA---GA--A-CGA-AAGCC--ATCGT-----------------TGAAA---TC--A---TATG-TACAAATGCAATATATAttataaataccatgtatattttgtgctatatcctacattccagggctaatagaatacttgtatatgtgctttattgccaataaattgaaaa
gi|12 : tTGT-ATC---TTGTTTGTT--G----AA-TCC-T--CTCA-ATCTT--GTGTCTTCAA--AAGAAA--T-T---A------------ATTCATA-T-ATCAGAGA-CT-----GT-----TTA--TGTCTTA---GA-AA-CAA-AAG-C---TCGTT--AC------attattattacataatacatggagttttgtgtgctataatatacttctacattctcatgatacacacatggatattatatgctgctttattgcaataaattga
gi|16 : tccTATA-TTA---GAGA-CT-----CTT---TTTA--TC--TTA---GA-AA-AGG-AAG-C--ATTTTT--AC------AGCT-A
gi|8 : TA--GA--TTA---AAACG-CTG-AAG-CATATTGTT--AC-------AAT-ATAAAA---A------TTATG-
5 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|10 ): AAAACATTATGTAGCACAGTATATATAATTCTACATGTATATTTGGTGTTATACTTCTACATTCCATGGCTAACAACACTTGTATATAGAATTATGTGCTTTATTGCCAATAAATTGAATTG
Unaligned ( gi|13 ): AGCACAGTATAGATAATTATACATATATATTTTGTGTTATATAGTTACTTCTACATTCCATGGCTAACAACACTAGTTATATGTGCTTTATTACCGATAAA
Unaligned ( gi|14 ): GTGTTATGCTTAGACTACATTCCATGGCTTATTAAACAACACTTACAATATGAATTGAATTGAAAAATTGAATTG
Unaligned ( gi|15 ): CTACAGTTCCTATGGCTACAACACTTGTATATAATGTGCTTTTATAATGCCAAATAAACTGGAATTG
Unaligned ( gi|17 ): CACAGTATATTATAATTATACATGTATATTTTGTGTTATA
Alignments
lowQualScore : 111 1111 1111 1 11 11 22 333333333333333333333 111 111111111111 111111 11111 111111 111 22222 4444444
lowQualScore : 444 8 2 7 4444 5 5555 5 1 5 5 66 5 5 0 44 11 4 66 00 4 777 777 8888 4 99 55 4 44 1 66 444444444444444444444 444 4 111111111111 888888 777 66666 66 66 222222 1 5 1 111 22222 6 2222222 1 6
lowQualScore : ... . . . .... . .... . . . . .. . . . .. .. . .. .. . ... ... .... . .. .. . .. . .. ..................... ... . ............ ...... ... ..... .. .. ...... . . . ... ..... . ....... . .
lowQualScore : 444 0 5 3 2222 0 9999 7 6 0 0 99 0 0 0 88 44 4 11 44 0 000 000 5555 0 55 55 4 77 7 99 666666666666666666666 111 4 777777777777 777777 888 88888 11 11 888888 6 7 7 777 33333 7 5555555 0 7
consensus : ATTTGTTGCCATCTTG-TAAGACTATTGTCGAAG----ATGAAAAAACATTTTTT--GCTTGACTGTCCTT-TATACAAACATAC-GA-GAA--AAAAGT-AT-TCA-AAAATATCCATAAT-ATT--AATCACTGT-ATC---TT---TA----C-TGAA--TCCT--CTCC-ATCTT--GTGACTACAA--ACGAAA--T-T---G-----------TCTTTATA-T-AGAGA-CT-----CTT---CTTA--TG--TTA---GAAA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TACGCA-C-CAGTATATACAGTGGCGTAGCT
Reference ( family-2369 ) : ATTTGTTGCCATCTTG-TAAGACTATTGTCGAAG----ATGAAAAAACATTTTTT--GCTTGATTGTCCTT-TATACAAACATAT-AA-GAA--AAAAGT-AT-TCA-AAAATATCCATAAT-ATT--AATCACTGT-ATC---TT---TA----C-TGAA--TCCT--CTCC-ATCTT-AGTGACTGCAA--ACGAAA--T-T---G-----------TCTTTATA-T-AGAGA-CT-----CTT---CTTA--NG--TTA---GAAA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TACGCA-C-CAGTATATANAGTGGCGTAGCT
gi|1 : AAACATTTT-T--GCTTGATTGTCCTT-TATACAAACATAT-CA-GAA--AAAAGTAAT-TCA-AAAATATTCAT-AT-ATT--AATCAATTT-A-C---TT---TA----C-TGAA--TCCT--CTCC-ATTTG-A--GACTACAA--ACGAAT--G-T---G-----------TCTTTATATT-AGAGACCT-----CTT---TTTA------TTATATGAAATCCGCAAG--CATTGTT--ACAATGCAGTAT-AT-ATA---AC--A--TTA-G-TA---G-A-CAGTATATATA
gi|11 : AGACTATTGTAGAAG----ATGAAAAA-CATTTTTC---CTTGATTGTCCTT-TATTCAAACATATGAG-GAA--AAAAGT-AT-TCA-AAAG-ATC--TTAT-ATT--AATC-CTGT-ATC---TT---TA----C-TGAA--TCCT--Cttacatgtatatttgtgttattactgtctacagttcccattgcatggcaactaccaaccacttgctatatgtgctttattgccaataaaatgaa
gi|12 : CTGT-ATC---TTGTTTG----T-TGAA--TCCT--CTCA-ATCTT--GTGTCTTCAA--AAGAAA--T-TA--A-----------TTCATATA-TCAGAGA-CT-----GT-----TTA--TGTCTTA---GAAA-CAA-AAG--C-TCGTT--AC------
gi|16 : tcTATA-TTAGAGA-CT-----CTT---TTTA--TC--TTA---GAAA-AGG-AAG--CATTTTT--AC------AGCT-A
gi|2 : -AA-GAA--TAAA-T-ATGTCA-AAAATATCTATA-T-ATTGAAATCA-TGT-ATCCACTT---TA----CCTGAAGTTCCT--CTCC-ATCTT--GAGACTACAA--ACGAAA--T-TTGGG-----------TCTT-ATA-T--TAGA-CT-----CTTTCTCCTA--TG--TTA---GAAA-C---GAG--CATTGTT--AC------GGATAATAAAG---AC--A--TTATGATA-GCA---CAGTATAT
gi|3 : ctcagATTTGTTGCCATCTTG-TAAGACTATTGTCGA-G----ATGAAAAAACATTTTTTTGGCTTGACTGGCCTA-TAGACAAACATAC-AA-GAA--AAAAGT-AT-TCACAAAATATCCATAAT-ATT--AATCATTGT-ATC---TT---TA----C-TAAA--TTCT--CTCC-ATCTTCAATGACTACAA--ACGAAA--T-T---G------------CTTTATA-T-AGAGA-CT-----CTT---CTTA--GG--TTA---GACA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TATGCACC-CAGTATACACAGTGGCGTAGCTtataaataccatgtatattttgtgctatatcctacattccagggctaatagaatacttgtatatgtgctttattgccaataaattgaaaa
gi|4 : ATTTGTTGCCATCTTG-TAAGACTATTGTCGA-G----ATGAAAAAACATTTTTTTGGCTTGACTGGCCTA-TAGACAAACATAC-AA-GAA--AAAAGT-AT-TCACAAAATATCCATAAT-ATT--AATCATTGT-ATC---TT---TA----C-TAAA--TTCT--CTCC-ATCTTCAATGACTACAA--ACGAAA--T-T---G------------CTTTATA-T-AGAGA-CT-----CTT---CTTA--GG--TTA---GACA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TATGCACC-CAGTATACACAGTGGCGTAGCT
gi|5 : AT-ATT--A-TCAATGT-ATC---TT---T-----C-TGAA--TCCTCGCTCC--TATT-TGTGACTACAAGCACGAAAATT-T---GTTTTTTTATTTTTTTTATA-G-AGAGA-CTATTTATTT---TTTAATGG--TTA---GAA---CG-AAAGCCATCGT-----------------TGAAA---TC--A---TATG-TACAAA-TGCAATATATA
gi|6 : tTTTGTTACCAATTGG-TAAAA--------GAAATTCTGTGAAAAAAC--TTTTT--G-TTGCCCGTCTTTGTAAACACACATAT-GA-GAATAAAAAGT--T-TAA-AAATTATATATA-T-ATT-------CTGT--TC---TT---TA----C-TGAA--ATCT--CTCCAATCT---GTGACTGCAA--AGGAAA--TCT---G-----------TTTTTA---------------------------A--TC--TTA---GAAA-----AAG--CA--GTTACAC------GCTT-ATAAAACTTACAAATAATATG-TA-GCA---CAGTATATAAA----CATAGCTattattattacataatacatggagttttgtgtgctataatatacttctacattctcatgatacacacatggatattatatgctgctttattgcaataaattga
gi|7 : acTTTGTTGCCAT--TG-TAAGACTATTGCAAAAG----AT-AAAAAACATATTTT--GATTGATTGTCCTT-GATACAGACATAT-TA--AA--AAAAGT-AT-TTA-AAAATAT-CAC-AT-ATT--AATC-CTGT-ATC---TT---TA----C-TGAA--TCCT--CTCC-ATCTT--GTGACTGCAA--ACGACAT-T-T---G-----------TCATTATATT-AGAGA-CT-----CTT---TTTA--TC--TTA---GAAA--CG-AAG--CATTGTT--AC------GG
gi|9 : aaacatatTTTGTTGCCAT---GATAAGACTATTGTCGAAG----ATGAAAAA-TATTCTTT--ACT-GATTGTCCTT-TATACAAACATAC-AACGAA--AAAAGT-AT-TCA-AAAGTGTCGATCATCGTT--AAT--CTGTAATC---TT---TACTAGC-TGAAC-TCCT--CTCC-ATCCT-TGTGACTGCAtt
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): CTCCATCACAAACGAAATGATTTGTTTTGGCTTTTATCACTGTTAAAGGAGTAACGATCTTTTTCCTTATGCTTGTAGATTAAAACGCTGAAGCATATTGTTACAATATAAAAATTATGATAGAACAGTAAGGACCTACATATTATAATCGCCATGTATTAATTTTTGTGCTTCTTCTACCATTC
Unaligned ( gi|10 ): AAAACATTATGTAGCACAGTATATATAATTCTACATGTATATTTGGTGTTATACTTCTACATTCCATGGCTAACAACACTTGTATATAGAATTATGTGCTTTATTGCCAATAAATTGAATTG
Unaligned ( gi|13 ): AGCACAGTATAGATAATTATACATATATATTTTGTGTTATATAGTTACTTCTACATTCCATGGCTAACAACACTAGTTATATGTGCTTTATTACCGATAAA
Unaligned ( gi|14 ): GTGTTATGCTTAGACTACATTCCATGGCTTATTAAACAACACTTACAATATGAATTGAATTGAAAAATTGAATTG
Unaligned ( gi|15 ): CTACAGTTCCTATGGCTACAACACTTGTATATAATGTGCTTTTATAATGCCAAATAAACTGGAATTG
Unaligned ( gi|17 ): CACAGTATATTATAATTATACATGTATATTTTGTGTTATA
Alignments
lowQualScore : 111 1111 1111 1 1 11 11 11 333333333333333333333 111 111111111111 1111 11111 111111 111 22222 4444444
lowQualScore : 444 8 2 7 4444 5 5555 5 1 4 0 66 5 5 0 9 00 4 66 00 4 777 777 8888 4 99 55 4 77 22 66 444444444444444444444 2 444 4 111111111111 4 1111 4 66666 66 66 222222 1 5 1 111 22222 6 2222222 0 6
lowQualScore : ... . . . .... . .... . . . . .. . . . . .. . .. .. . ... ... .... . .. .. . .. .. .. ..................... . ... . ............ . .... . ..... .. .. ...... . . . ... ..... . ....... . .
lowQualScore : 444 0 5 3 2222 0 9999 7 6 0 0 99 0 0 0 6 77 4 11 44 0 000 000 5555 0 55 55 4 33 22 99 666666666666666666666 2 111 4 777777777777 4 7777 4 88888 11 11 888888 6 7 7 777 33333 7 5555555 2 7
consensus : ATTTGTTGCCATCTTG-TAAGACTATTGTCGAAG----ATGAAAAAACATTTTTT--GCTTGACTGTCCTT-TATACAAACATACGA-GAA--AAAAGT-AT-TCA-AAAATATCCATAAT-ATT--AATCACTGT-ATC---TT---TA----C-TGAA--TCCTC--TCC-AT-CTT--GTGACTACAA--ACGAAA--T-T---G-----------TCTTTATA-T-AGAGA-CT-----CT---TCTT-AT-G--TTA-GAAA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TACGCA-C-CAGTATATACAGTGGCGTAGCT
Reference ( family-2369 ) : ATTTGTTGCCATCTTG-TAAGACTATTGTCGAAG----ATGAAAAAACATTTTTT--GCTTGACTGTCCTT-TATACAAACATACGA-GAA--AAAAGT-AT-TCA-AAAATATCCATAAT-ATT--AATCACTGT-ATC---TT---TA----C-TGAA--TCCTC--TCC-AT-CTT--GTGACTACAA--ACGAAA--T-T---G-----------TCTTTATA-T-AGAGA-CT-----CT---TCTT-AT-G--TTA-GAAA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TACGCA-C-CAGTATATACAGTGGCGTAGCT
gi|1 : AAACATTTT-T--GCTTGATTGTCCTT-TATACAAACATATCA-GAA--AAAAGTAAT-TCA-AAAATATTCAT-AT-ATT--AATCAATTT-A-C---TT---TA----C-TGAA--TCCTC--TCC-AT--TT--GAGACTACAA--ACGAAT--G-T---G-----------TCTTTATATT-AGAGACCT-----CT---TTTT-AT-T--ATATGAAATCCGCAAG--CATTGTT--ACAATGCAGTAT-AT-ATA---AC--A--TTA-G-TA---G-A-CAGTATATATA
gi|11 : AGACTATTGTAGAAG----ATGAAAAA-CATTTTTC---CTTGATTGTCCTT-TATTCAAACATATGAGGAA--AAAAGT-AT-TCA-AAAG-ATC--TTAT-ATT--AATC-CTGT-ATC---TT---TA----C-TGAA--TCCTC--ttacatgtatatttgtgttattactgtctacagttcccattgcatggcaactaccaaccacttgctatatgtgctttattgccaataaaatgaa
gi|12 : CTGT-ATC---TTGTTTG----T-TGAA--TCCTC--TCA-AT-CTT--GTGTCTTCAA--AAGAAA--T-TA--A-----------TTCATATA-TCAGAGA-CT-----GT-----TT-AT-GTCTTA-GAAA-CAA-AAG--C-TCGTT--AC------
gi|16 : tcTATA-TTAGAGA-CT-----CT---TTTT-AT-C--TTA-GAAA-AGG-AAG--CATTTTT--AC------AGCT-A
gi|2 : A-GAA--TAAA-T-ATGTCA-AAAATATCTATA-T-ATTGAAATCA-TGT-ATCCACTT---TA----CCTGAAGTTCCTC--TCC-AT-CTT--GAGACTACAA--ACGAAA--T-TTGGG-----------TC-TTATA-T--TAGA-CT-----CTTTCTCCT-AT-G--TTA-GAAA-C---GAG--CATTGTT--AC------GGATAATAAAG---AC--A--TTATGATA-GCA---CAGTATAT
gi|3 : ctcagaATTTGTTGCCATCTTG-TAAGACTATTGTCGA-G----ATGAAAAAACATTTTTTTGGCTTGACTGGCCTA-TAGACAAACATACAA-GAA--AAAAGT-AT-TCACAAAATATCCATAAT-ATT--AATCATTGT-ATC---TT---TA----C-TAAA--TTCTC--TCC-AT-CTTCAATGACTACAA--ACGAAA--T-T---G------------CTTTATA-T-AGAGA-CT-----CT---TCTT-AG-G--TTA-GACA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TATGCACC-CAGTATACACAGTGGCGTAGCTtataaataccatgtatattttgtgctatatcctacattccagggctaatagaatacttgtatatgtgctttattgccaataaattgaaaa
gi|4 : ATTTGTTGCCATCTTG-TAAGACTATTGTCGA-G----ATGAAAAAACATTTTTTTGGCTTGACTGGCCTA-TAGACAAACATACAA-GAA--AAAAGT-AT-TCACAAAATATCCATAAT-ATT--AATCATTGT-ATC---TT---TA----C-TAAA--TTCTC--TCC-AT-CTTCAATGACTACAA--ACGAAA--T-T---G------------CTTTATA-T-AGAGA-CT-----CT---TCTT-AG-G--TTA-GACA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TATGCACC-CAGTATACACAGTGGCGTAGCT
gi|5 : AT-ATT--A-TCAATGT-ATC---TT---T-----C-TGAA--TCCTCGCTCCTAT--TT--GTGACTACAAGCACGAAAATT-T---GTTTTTTTATTTTTTTTATA-G-AGAGA-CTATTTATT---TTTTAATGG--TTA-GAA---CG-AAAGCCATCGT-----------------TGAAA---TC--A---TATG-TACAAA-TGCAATATATA
gi|6 : tTTTGTTACCAATTGG-TAAAA--------GAAATTCTGTGAAAAAAC--TTTTT--G-TTGCCCGTCTTTGTAAACACACATATGA-GAATAAAAAGT--T-TAA-AAATTATATATA-T-ATT-------CTGT--TC---TT---TA----C-TGAA--ATCTC--TCC-AA-TCT--GTGACTGCAA--AGGAAA--TCT---G-----------TTTTTA----------------------------AT-C--TTA-GAAA-----AAG--CA--GTTACAC------GCTT-ATAAAACTTACAAATAATATG-TA-GCA---CAGTATATAAA----CATAGCTattattattacataatacatggagttttgtgtgctataatatacttctacattctcatgatacacacatggatattatatgctgctttattgcaataaattga
gi|7 : acTTTGTTGCCAT--TG-TAAGACTATTGCAAAAG----AT-AAAAAACATATTTT--GATTGATTGTCCTT-GATACAGACATATTA--AA--AAAAGT-AT-TTA-AAAATATC-ACA-T-ATT--AATC-CTGT-ATC---TT---TA----C-TGAA--TCCTC--TCC-AT-CTT--GTGACTGCAA--ACGACAT-T-T---G-----------TCATTATATT-AGAGA-CT-----CT---TTTT-AT-C--TTA-GAAA--CG-AAG--CATTGTT--AC------GG
gi|9 : aaacatatTTTGTTGCCAT---GATAAGACTATTGTCGAAG----ATGAAAAA-TATTCTTT--ACT-GATTGTCCTT-TATACAAACATACAACGAA--AAAAGT-AT-TCA-AAAGTGTCGATCATCGTT--AAT--CTGTAATC---TT---TACTAGC-TGAAC-TCCTC--TCC-ATCCTT--GTGACTGCAtt
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): CTCCATCACAAACGAAATGATTTGTTTTGGCTTTTATCACTGTTAAAGGAGTAACGATCTTTTTCCTTATGCTTGTAGATTAAAACGCTGAAGCATATTGTTACAATATAAAAATTATGATAGAACAGTAAGGACCTACATATTATAATCGCCATGTATTAATTTTTGTGCTTCTTCTACCATTC
Unaligned ( gi|10 ): AAAACATTATGTAGCACAGTATATATAATTCTACATGTATATTTGGTGTTATACTTCTACATTCCATGGCTAACAACACTTGTATATAGAATTATGTGCTTTATTGCCAATAAATTGAATTG
Unaligned ( gi|13 ): AGCACAGTATAGATAATTATACATATATATTTTGTGTTATATAGTTACTTCTACATTCCATGGCTAACAACACTAGTTATATGTGCTTTATTACCGATAAA
Unaligned ( gi|14 ): GTGTTATGCTTAGACTACATTCCATGGCTTATTAAACAACACTTACAATATGAATTGAATTGAAAAATTGAATTG
Unaligned ( gi|15 ): CTACAGTTCCTATGGCTACAACACTTGTATATAATGTGCTTTTATAATGCCAAATAAACTGGAATTG
Unaligned ( gi|17 ): CACAGTATATTATAATTATACATGTATATTTTGTGTTATA
Alignments
lowQualScore : 111 1111 1111 1 1 11 11 11 333333333333333333333 111 111111111111 1111 11111 111111 111 22222 4444444
lowQualScore : 444 8 2 7 4444 5 5555 5 1 4 0 66 5 5 0 9 00 4 66 00 4 777 777 8888 4 99 55 4 77 22 66 444444444444444444444 2 444 4 111111111111 4 1111 4 66666 66 66 222222 1 5 1 111 22222 6 2222222 0 6
lowQualScore : ... . . . .... . .... . . . . .. . . . . .. . .. .. . ... ... .... . .. .. . .. .. .. ..................... . ... . ............ . .... . ..... .. .. ...... . . . ... ..... . ....... . .
lowQualScore : 444 0 5 3 2222 0 9999 7 6 0 0 99 0 0 0 6 77 4 11 44 0 000 000 5555 0 55 55 4 33 22 99 666666666666666666666 2 111 4 777777777777 4 7777 4 88888 11 11 888888 6 7 7 777 33333 7 5555555 2 7
consensus : ATTTGTTGCCATCTTG-TAAGACTATTGTCGAAG----ATGAAAAAACATTTTTT--GCTTGACTGTCCTT-TATACAAACATACGA-GAA--AAAAGT-AT-TCA-AAAATATCCATAAT-ATT--AATCACTGT-ATC---TT---TA----C-TGAA--TCCTC--TCC-AT-CTT--GTGACTACAA--ACGAAA--T-T---G-----------TCTTTATA-T-AGAGA-CT-----CT---TCTT-AT-G--TTA-GAAA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TACGCA-C-CAGTATATACAGTGGCGTAGCT
Reference ( family-2369 ) : ATTTGTTGCCATCTTG-TAAGACTATTGTCGAAG----ATGAAAAAACATTTTTT--GCTTGACTGTCCTT-TATACAAACATACGA-GAA--AAAAGT-AT-TCA-AAAATATCCATAAT-ATT--AATCACTGT-ATC---TT---TA----C-TGAA--TCCTC--TCC-AT-CTT--GTGACTACAA--ACGAAA--T-T---G-----------TCTTTATA-T-AGAGA-CT-----CT---TCTT-AT-G--TTA-GAAA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TACGCA-C-CAGTATATACAGTGGCGTAGCT
gi|1 : AAACATTTT-T--GCTTGATTGTCCTT-TATACAAACATATCA-GAA--AAAAGTAAT-TCA-AAAATATTCAT-AT-ATT--AATCAATTT-A-C---TT---TA----C-TGAA--TCCTC--TCC-AT--TT--GAGACTACAA--ACGAAT--G-T---G-----------TCTTTATATT-AGAGACCT-----CT---TTTT-AT-T--ATATGAAATCCGCAAG--CATTGTT--ACAATGCAGTAT-AT-ATA---AC--A--TTA-G-TA---G-A-CAGTATATATA
gi|11 : AGACTATTGTAGAAG----ATGAAAAA-CATTTTTC---CTTGATTGTCCTT-TATTCAAACATATGAGGAA--AAAAGT-AT-TCA-AAAG-ATC--TTAT-ATT--AATC-CTGT-ATC---TT---TA----C-TGAA--TCCTC--ttacatgtatatttgtgttattactgtctacagttcccattgcatggcaactaccaaccacttgctatatgtgctttattgccaataaaatgaa
gi|12 : CTGT-ATC---TTGTTTG----T-TGAA--TCCTC--TCA-AT-CTT--GTGTCTTCAA--AAGAAA--T-TA--A-----------TTCATATA-TCAGAGA-CT-----GT-----TT-AT-GTCTTA-GAAA-CAA-AAG--C-TCGTT--AC------
gi|16 : tcTATA-TTAGAGA-CT-----CT---TTTT-AT-C--TTA-GAAA-AGG-AAG--CATTTTT--AC------AGCT-A
gi|2 : A-GAA--TAAA-T-ATGTCA-AAAATATCTATA-T-ATTGAAATCA-TGT-ATCCACTT---TA----CCTGAAGTTCCTC--TCC-AT-CTT--GAGACTACAA--ACGAAA--T-TTGGG-----------TC-TTATA-T--TAGA-CT-----CTTTCTCCT-AT-G--TTA-GAAA-C---GAG--CATTGTT--AC------GGATAATAAAG---AC--A--TTATGATA-GCA---CAGTATAT
gi|3 : ctcagaATTTGTTGCCATCTTG-TAAGACTATTGTCGA-G----ATGAAAAAACATTTTTTTGGCTTGACTGGCCTA-TAGACAAACATACAA-GAA--AAAAGT-AT-TCACAAAATATCCATAAT-ATT--AATCATTGT-ATC---TT---TA----C-TAAA--TTCTC--TCC-AT-CTTCAATGACTACAA--ACGAAA--T-T---G------------CTTTATA-T-AGAGA-CT-----CT---TCTT-AG-G--TTA-GACA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TATGCACC-CAGTATACACAGTGGCGTAGCTtataaataccatgtatattttgtgctatatcctacattccagggctaatagaatacttgtatatgtgctttattgccaataaattgaaaa
gi|4 : ATTTGTTGCCATCTTG-TAAGACTATTGTCGA-G----ATGAAAAAACATTTTTTTGGCTTGACTGGCCTA-TAGACAAACATACAA-GAA--AAAAGT-AT-TCACAAAATATCCATAAT-ATT--AATCATTGT-ATC---TT---TA----C-TAAA--TTCTC--TCC-AT-CTTCAATGACTACAA--ACGAAA--T-T---G------------CTTTATA-T-AGAGA-CT-----CT---TCTT-AG-G--TTA-GACA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TATGCACC-CAGTATACACAGTGGCGTAGCT
gi|5 : AT-ATT--A-TCAATGT-ATC---TT---T-----C-TGAA--TCCTCGCTCCTAT--TT--GTGACTACAAGCACGAAAATT-T---GTTTTTTTATTTTTTTTATA-G-AGAGA-CTATTTATT---TTTTAATGG--TTA-GAA---CG-AAAGCCATCGT-----------------TGAAA---TC--A---TATG-TACAAA-TGCAATATATA
gi|6 : tTTTGTTACCAATTGG-TAAAA--------GAAATTCTGTGAAAAAAC--TTTTT--G-TTGCCCGTCTTTGTAAACACACATATGA-GAATAAAAAGT--T-TAA-AAATTATATATA-T-ATT-------CTGT--TC---TT---TA----C-TGAA--ATCTC--TCC-AA-TCT--GTGACTGCAA--AGGAAA--TCT---G-----------TTTTTA----------------------------AT-C--TTA-GAAA-----AAG--CA--GTTACAC------GCTT-ATAAAACTTACAAATAATATG-TA-GCA---CAGTATATAAA----CATAGCTattattattacataatacatggagttttgtgtgctataatatacttctacattctcatgatacacacatggatattatatgctgctttattgcaataaattga
gi|7 : acTTTGTTGCCAT--TG-TAAGACTATTGCAAAAG----AT-AAAAAACATATTTT--GATTGATTGTCCTT-GATACAGACATATTA--AA--AAAAGT-AT-TTA-AAAATATC-ACA-T-ATT--AATC-CTGT-ATC---TT---TA----C-TGAA--TCCTC--TCC-AT-CTT--GTGACTGCAA--ACGACAT-T-T---G-----------TCATTATATT-AGAGA-CT-----CT---TTTT-AT-C--TTA-GAAA--CG-AAG--CATTGTT--AC------GG
gi|9 : aaacatatTTTGTTGCCAT---GATAAGACTATTGTCGAAG----ATGAAAAA-TATTCTTT--ACT-GATTGTCCTT-TATACAAACATACAACGAA--AAAAGT-AT-TCA-AAAGTGTCGATCATCGTT--AAT--CTGTAATC---TT---TACTAGC-TGAAC-TCCTC--TCC-ATCCTT--GTGACTGCAtt
blockSeqs : CTT A C A TTCT A TGGC G T G G TA . G C T TA C GA AT A CAC GTT CTAG C GT GC T CC CA GC ATTTGTTTTTTTATTTT C TC . ATTTATTTT A GTC . CAA GC AC . C A A CTT AAATA A TGCACC G
blockSeqs : TTG . C A . A TGGC . G A C . . . C C AA . . AT . . . . . C . . C CA . TTTGGGT T TT . CTTTCTC . GG . AGG . . . A . A . AT . TGCACC .
blockSeqs : T . A A . A GA . G A . . . . . C AA . . AA . . . . . . . . C . . TTAAT T TT . CTTT . C . CCG . . . A . A . AT . CAAATG
blockSeqs : . . C . . A AC . A G . . . . . T CA . . C . . . . . . . . C . . TCTGT T T . CTTC . G . CCG . . . A . G . A . GCA
blockSeqs : . . . . C . T T . . . . . G A . . A . . . . . . . . C . . TTTGT T T . CTTC . G . CG . . . T . A . A . GCA
blockSeqs : . G . T A . . . . . . A . . C . . . . . . . . T . . TTG A T . CTTT . G . CG . . . . .
blockSeqs : . . . . . . A . . C . . . . . . . . C . . TTG . G . GT . C . C . . .
blockSeqs : . . C . . . . . . . . . . . . . . C . . . . .
blockSeqs : . . . . . . .
blockSeqCons : NA C* C* TTTGT**************** T** CG*** ****** CGCACC*
originalCons : ATTTGTTGCCATCTTG-TAAGACTATTGTCGAAG----ATGAAAAAACATTTTTT--GCTTGACTGTCCTT-TATACAAACATACGA-GAA--AAAAGT-AT-TCA-AAAATATCCATAAT-ATT--AATCACTGT-ATC---TT---TA----C-TGAA--TCCTC--TCC-AT-CTT--GTGACTACAA--ACGAAA--T-T---G-----------TCTTTATA-T-AGAGA-CT-----CT---TCTT-AT-G--TTA-GAAA-CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TACGCA-C-CAGTATATACAGTGGCGTAGCT
finalCons : ATTTGTTGCCATCTTG-TAAGACTATTGTCGAAG----ATGAAAAAACATTTTTT--GCTTGACTGTCCTT-TATACAAACATACGA-GAA--AAAAGT-AT-TCA-AAAATATCCATNAT-ATT--AATCC-TGT-ATC---TT---TA----C-TGAA--TCCTC--TCC-ATC-TT--GTGACTACAA--ACGAAATTTGT----------------CTTTATAT--AGAGA-CT-----CT---TCTT-AT-G--TTA-GAAACG---AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TACGCACC-CAGTATATACAGTGGCGTAGCT
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): CTCCATCACAAACGAAATGATTTGTTTTGGCTTTTATCACTGTTAAAGGAGTAACGATCTTTTTCCTTATGCTTGTAGATTAAAACGCTGAAGCATATTGTTACAATATAAAAATTATGATAGAACAGTAAGGACCTACATATTATAATCGCCATGTATTAATTTTTGTGCTTCTTCTACCATTC
Unaligned ( gi|10 ): AAAACATTATGTAGCACAGTATATATAATTCTACATGTATATTTGGTGTTATACTTCTACATTCCATGGCTAACAACACTTGTATATAGAATTATGTGCTTTATTGCCAATAAATTGAATTG
Unaligned ( gi|13 ): AGCACAGTATAGATAATTATACATATATATTTTGTGTTATATAGTTACTTCTACATTCCATGGCTAACAACACTAGTTATATGTGCTTTATTACCGATAAA
Unaligned ( gi|14 ): GTGTTATGCTTAGACTACATTCCATGGCTTATTAAACAACACTTACAATATGAATTGAATTGAAAAATTGAATTG
Unaligned ( gi|15 ): CTACAGTTCCTATGGCTACAACACTTGTATATAATGTGCTTTTATAATGCCAAATAAACTGGAATTG
Unaligned ( gi|17 ): CACAGTATATTATAATTATACATGTATATTTTGTGTTATA
Alignments
lowQualScore : 111 1111 1111 1 1 1111 111 11 3333333333333333 111 111111111111 1111 1111 111111 111 22222 222222
lowQualScore : 444 8 2 7 4444 5 5555 5 1 4 0 66 5 5 0 7777 4 66 666 4 777 777 8888 4 99 55 4 77 22 66 5 2222222222222222 2 444 4 111111111111 4 1111 4 4 7777 4 66 66 222222 1 5 1 111 22222 6 999999 0 6
lowQualScore : ... . . . .... . .... . . . . .. . . . .... . .. ... . ... ... .... . .. .. . .. .. .. . ................ . ... . ............ . .... . . .... . .. .. ...... . . . ... ..... . ...... . .
lowQualScore : 444 0 5 3 2222 0 9999 7 6 0 0 99 0 0 0 5555 4 11 777 0 000 000 5555 0 55 55 4 33 22 99 0 4444444444444444 2 111 4 777777777777 4 7777 4 4 8888 4 11 11 888888 6 7 7 777 33333 7 222222 2 7
consensus : ATTTGTTGCCATCTTG-TAAGACTATTGTCGAAG----ATGAAAAAACATTTTTT--GCTTGACTGTCCTT-TATACAAACATACGA-GAA--AAAAGT-AT-TCA-AAAATATCCAT-AT-ATT--AATC-C-TGT-ATC---TT---TA----C-TGAA--TCCTC--TCC-AT-CTT--GTGACTACAA--ACG-AAATTT--G-----------TCTTTATA-T-AGAGA-CT-----CT---TCTT-AT-G--TTA-G-AAA--C-G-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TACGCAC-CAGTATATACAGTGGCGTAGCT
Reference ( family-2369 ) : ATTTGTTGCCATCTTG-TAAGACTATTGTCGAAG----ATGAAAAAACATTTTTT--GCTTGACTGTCCTT-TATACAAACATACGA-GAA--AAAAGT-AT-TCA-AAAATATCCATNAT-ATT--AATC-C-TGT-ATC---TT---TA----C-TGAA--TCCTC--TCC-AT-CTT--GTGACTACAA--ACG-AAATTT--G-----------TCTTTATA-T-AGAGA-CT-----CT---TCTT-AT-G--TTA-G-AAA--C-G-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TACGCACCCAGTATATACAGTGGCGTAGCT
gi|1 : AAACATTTT-T--GCTTGATTGTCCTT-TATACAAACATATCA-GAA--AAAAGTAAT-TCA-AAAATATTCAT-AT-ATT--AATCAA-TTT-A-C---TT---TA----C-TGAA--TCCTC--TCC-AT--TT--GAGACTACAA--ACG--AATGT--G-----------TCTTTATATT-AGAGACCT-----CT---TTTT-AT-T--ATATG-AAATCC-GCAAG--CATTGTT--ACAATGCAGTAT-AT-ATA---AC--A--TTA-G-TAGA----CAGTATATATA
gi|11 : AGACTATTGTAGAAG----ATGAAAAA-CATTTTTC---CTTGATTGTCCTT-TATTCAAACATATGAGGAA--AAAAGT-AT-TCA-AAAG-ATC--TTAT-ATT--AATC-C-TGT-ATC---TT---TA----C-TGAA--TCCTC--ttacatgtatatttgtgttattactgtctacagttcccattgcatggcaactaccaaccacttgctatatgtgctttattgccaataaaatgaa
gi|12 : TC-C-TGT-ATC---TTGTTTG----T-TGAA--TCCTC--TCA-AT-CTT--GTGTCTTCAA--AAG-AAATTA--A-----------TTCATATA-TCAGAGA-CT-----GT-----TT-AT-GTCTTA-G-AAA--CAA-AAG--C-TCGTT--AC------
gi|16 : TATA-TTAGAGA-CT-----CT---TTTT-AT-C--TTA-GAAAA--G-G-AAG--CATTTTT--AC------AGCT-A
gi|2 : A-GAA--TAAA-T-ATGTCA-AAAATATCTAT-AT-ATTGAAATC-A-TGT-ATCCACTT---TA----CCTGAAGTTCCTC--TCC-AT-CTT--GAGACTACAA--ACG-AAATTTGGG-----------TC-TTATA-T--TAGA-CT-----CTTTCTCCT-AT-G--TTA-G-AAA--C-G--AG--CATTGTT--AC------GGATAATAAAG---AC--A--TTATGATA-GCA--CAGTATAT
gi|3 : ctcagaATTTGTTGCCATCTTG-TAAGACTATTGTCGA-G----ATGAAAAAACATTTTTTTGGCTTGACTGGCCTA-TAGACAAACATACAA-GAA--AAAAGT-AT-TCACAAAATATCCATAAT-ATT--AATCAT-TGT-ATC---TT---TA----C-TAAA--TTCTC--TCC-AT-CTTCAATGACTACAA--ACG-AAATT---G------------CTTTATA-T-AGAGA-CT-----CT---TCTT-AG-G--TTA-G-ACA--CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TATGCACCCAGTATACACAGTGGCGTAGCTtataaataccatgtatattttgtgctatatcctacattccagggctaatagaatacttgtatatgtgctttattgccaataaattgaaaa
gi|4 : ATTTGTTGCCATCTTG-TAAGACTATTGTCGA-G----ATGAAAAAACATTTTTTTGGCTTGACTGGCCTA-TAGACAAACATACAA-GAA--AAAAGT-AT-TCACAAAATATCCATAAT-ATT--AATCAT-TGT-ATC---TT---TA----C-TAAA--TTCTC--TCC-AT-CTTCAATGACTACAA--ACG-AAATT---G------------CTTTATA-T-AGAGA-CT-----CT---TCTT-AG-G--TTA-G-ACA--CCG-AAG--CATTGTT--AC------GGAT-ATAAAA---AC--AT-TTATG-TATGCACCCAGTATACACAGTGGCGTAGCT
gi|5 : AT-ATT--A-TC-AATGT-ATC---TT---T-----C-TGAA--TCCTCGCTCCTAT--TT--GTGACTACAAGCACGAAAATTT--GTTTTTTTATTTTTTTTATA-G-AGAGA-CTATTTATT---TTTTAATGG--TTA-G--AA--C-G-AAAGCCATCGT-----------------TGAAA---TC--A---TATG-TACAAATGCAATATATA
gi|6 : tTTTGTTACCAATTGG-TAAAA--------GAAATTCTGTGAAAAAAC--TTTTT--G-TTGCCCGTCTTTGTAAACACACATATGA-GAATAAAAAGT--T-TAA-AAATTAT--AT-AT-AT----ATT-C-TGT--TC---TT---TA----C-TGAA--ATCTC--TCC-AA-TCT--GTGACTGCAA--AGG-AAATCT--G-----------TTTTTA----------------------------AT-C--TTA-G-AAA------AAG--CA--GTTACAC------GCTT-ATAAAACTTACAAATAATATG-TA-GCA--CAGTATATAAA----CATAGCTattattattacataatacatggagttttgtgtgctataatatacttctacattctcatgatacacacatggatattatatgctgctttattgcaataaattga
gi|7 : acTTTGTTGCCAT--TG-TAAGACTATTGCAAAAG----AT-AAAAAACATATTTT--GATTGATTGTCCTT-GATACAGACATATTA--AA--AAAAGT-AT-TTA-AAAATATC-A-CAT-ATT--AATC-C-TGT-ATC---TT---TA----C-TGAA--TCCTC--TCC-AT-CTT--GTGACTGCAA--ACG-ACATTT--G-----------TCATTATATT-AGAGA-CT-----CT---TTTT-AT-C--TTA-G-AAA--C-G-AAG--CATTGTT--AC------GG
gi|9 : aaacatatTTTGTTGCCAT---GATAAGACTATTGTCGAAG----ATGAAAAA-TATTCTTT--ACT-GATTGTCCTT-TATACAAACATACAACGAA--AAAAGT-AT-TCA-AAAGTGTCGATCATCGTT--AAT--C-TGTAATC---TT---TACTAGC-TGAAC-TCCTC--TCC-ATCCTT--GTGACTGCAtt
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): CTCCATCACAAACGAAATGATTTGTTTTGGCTTTTATCACTGTTAAAGGAGTAACGATCTTTTTCCTTATGCTTGTAGATTAAAACGCTGAAGCATATTGTTACAATATAAAAATTATGATAGAACAGTAAGGACCTACATATTATAATCGCCATGTATTAATTTTTGTGCTTCTTCTACCATTC
Unaligned ( gi|10 ): AAAACATTATGTAGCACAGTATATATAATTCTACATGTATATTTGGTGTTATACTTCTACATTCCATGGCTAACAACACTTGTATATAGAATTATGTGCTTTATTGCCAATAAATTGAATTG
Unaligned ( gi|13 ): AGCACAGTATAGATAATTATACATATATATTTTGTGTTATATAGTTACTTCTACATTCCATGGCTAACAACACTAGTTATATGTGCTTTATTACCGATAAA
Unaligned ( gi|14 ): GTGTTATGCTTAGACTACATTCCATGGCTTATTAAACAACACTTACAATATGAATTGAATTGAAAAATTGAATTG
Unaligned ( gi|15 ): CTACAGTTCCTATGGCTACAACACTTGTATATAATGTGCTTTTATAATGCCAAATAAACTGGAATTG
Unaligned ( gi|17 ): CACAGTATATTATAATTATACATGTATATTTTGTGTTATA