lowQualScore : 111111111111111 1111111111 1111111 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 11111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 777777777777777 7777777777 1 1 1 3333333 1 1 1 11 1 1 1 555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 1 9999999999999999999999999999999999999999999999999 1 2222 11 44444444 1 1 2222 11 1 11 4444444444444444 1 1111 1111 2222 1111 11111 33333333333333333 222222222 1111 222222222222222222222 11111 11 33333333 1 2222 1 1 22 1 222 1 33333333333 1 888888888888888888888 1 11 1 11111 2222 11 11 111 1111 44444444444444444444444444444444444444444 444444444444 1 11 222222 11111 22222222 11 1 1 1 3333 11 44444444444 1 11111 22 33333333 1 11 111 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 22222 1 1 1 2222 44444444 1 1 444444444 1 11 44444 11 44444 22 4
lowQualScore : 6 6 888888888888888 5555555555 6 5 6 7 6 5 0000000 6 7 5 5 22 7 5 5 6 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 4 5 4 0000000000000000000000000000000000000000000000000 2 4 5 3 7777 8888 6 6 6 3 88 44444444 5 3 5 8888 88 5 6 6 55 7 1111111111111111 9 0 2 1 77 0 7777 6 6666 6 2 1 3 6 88 66 3 2 77 6666 6 3 0 2 6 4444 55555 77 00000000000000000 0 5 666666666 6 2222 1 99 5 666666666666666666666 4 4 6 7 22222 22 6 2 22 00000000 1 6 6 6 1 1 2 1 8 8 4 2 0 0000 6 4 5 11 6 777 6 6 3 44444444444 2 6 6 888888888888888888888 3 5 0 1 99 3 1 6 99999 6666 88 77 1 33 8 666 1 6 2 7 7 1 7777 11111111111111111111111111111111111111111 2 111111111111 6 8 11 0 333333 3 55555 5 4 22222222 1 22 0 3 0 4 0 77 0 6 5555 2 3 33 3 55555555555 0 77 00000 33 00000000 4 5 1 7 0 2 2 33 666 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 00000 3 6 5 2 8888 9 66666666 3 2 0 0 666666666 1 3 66 6 66666 2 4 2 77 6 6 6 6 88 55 66666 11 0
lowQualScore : . . ............... .......... . . . . . . ....... . . . . .. . . . . ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ . . . ................................................. . . . . .... .... . . . . .. ........ . . . .... .. . . . .. . ................ . . . . .. . .... . .... . . . . . .. .. . . .. .... . . . . . .... ..... .. ................. . . ......... . .... . .. . ..................... . . . . ..... .. . . .. ........ . . . . . . . . . . . . . .... . . . .. . ... . . . ........... . . . ..................... . . . . .. . . . ..... .... .. .. . .. . ... . . . . . . .... ......................................... . ............ . . .. . ...... . ..... . . ........ . .. . . . . . .. . . .... . . .. . ........... . .. ..... .. ........ . . . . . . . .. ... ....................................................................................................................................... ..... . . . . .... . ........ . . . . ......... . . .. . ..... . . . .. . . . . .. .. ..... .. .
lowQualScore : 0 0 000000000000000 0000000000 0 0 0 0 0 0 0000000 0 0 0 0 00 0 0 0 0 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 5 0 0000000000000000000000000000000000000000000000000 5 0 0 0 7777 3333 7 7 7 7 00 00000000 0 7 0 3333 33 0 7 7 77 7 7777777777777777 0 7 3 0 77 2 2222 7 8888 7 5 0 7 7 22 99 7 5 77 7777 7 7 7 2 7 2222 22222 99 00000000000000000 6 7 777777777 7 1111 7 00 7 888888888888888888888 2 2 7 8 22222 00 3 5 00 00000000 0 4 4 6 4 2 2 4 0 6 5 5 7 3333 0 0 0 00 0 777 7 7 3 77777777777 0 0 7 333333333333333333333 7 0 7 0 55 3 0 0 00000 7777 33 88 0 22 0 222 7 8 8 8 2 0 0000 00000000000000000000000000000000000000000 0 000000000000 8 0 88 8 000000 2 22222 0 6 22222222 2 55 2 0 0 0 0 00 5 0 2222 0 2 88 0 55555555555 5 33 22222 33 33333333 0 0 0 0 7 5 5 88 000 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 00000 3 7 7 0 7777 0 77777777 3 0 7 7 777777777 0 3 33 7 33333 5 0 5 00 0 0 0 0 00 55 00000 00 0
consensus : AAATAAAAAAA---------AAAC--AGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACTTGTAAAGAAATCCTTGGCAGAATGAAGACTCAACA-------CAAGAAGTGGATCTCGTCTCATACCATGAGAAAACCGGATGTGAGGAAGGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCACCAAAGGTAAAGGCTCAATA------GGTC--GGACATNTGAAGAGGNCATGTACGATGGCCANNAAGAAGCTATCTGGAAAACGAGTNTAAGCGAAATATTAGGAAAGANNAGCCGGGGNAAAAAACGGAAACCCTCTCGTAACAACTGAAGA-CAATTGAAGAGATGGGCAGAACATTTT-GG-AGATCTG-----------AACGGA--CC-AACGNCAGA--AC-T--CCACC--------GGAT-AT--ACAACCAGCCGA--TACAGACC-CCC--GATCA-ACTGCGGCGAA-CCAACAAA--------------AN-AGAGACACA-------GGAGAGCT-ATNACCACGCTTAAAAACGGNAANGCNCGGCGGGNCTCTGACGAGNTACCNNCGGAAGCANATCAGAGCNGATTTTT-GACAGCTACGGACTGGCATCCTCCACNCACCGCTTCAAGAGGAATATGGGAGGNAGTGGANANACTATTCCNGAGGGGCGGAAAGAGGGNACCNTAATCAAGCTNCCCCAAAGAANGGAAATCTGAGGGACTGTTGTGNNAACTACNGNGGAATCGCGCTCCTNTCA----GTTCCGGGCAAAGTNCTCAACNGAGTNCTNAACTAGANAGGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAAGCGGGTTTTTGNNGAAACAGATC-TGTACCGACCGGATCGCCAGCCTACGCACC--GT-CATC---GAACAAT-CANTGGAGT-GGAAGTCCC--CCCTATACGTNAGCTT-CATAGATTA-TG-AGAAAGCNTTCGATAGCG-TG----GACAGGGAGAC-GC-TG--TGG------AA-GC------TAC-TGAGG---------CAC-TATGG----AGTA-CCCG-AGAAGCTCG------TCTCC------CTCATTCGTAACAC-CTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGNCG--GAAAGTTTCGAGGTNAAGACTGGAGTTCGNCAAGGATGTCTGCTG-TCGCCGTTCCTNTTCTTNC--TGG-CATTGACTGGACCNTGAGGACCACCACGACAGGCAGGAACAACGNTATACANTGGACG-CTCCTGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTCTCGCACAGCCAC----AGG----TGCAGGACAAGACAACTCGCCTCGCAACGANATCAGCAGGAACGGGTCTCAAGATCAACNTGAAGAAA-ACGGAGCTGATGAAGATCAACACCACTGCC--CA-AT-ACC--AGTCACAGTCGGTGGAGAGCCCATCAGAGAAGTNGA--GTCCTTCGTTTACCTGGGGAGTGTGGTGGACAGACANGAGGGCACAGACCGA----GACG-----------------T----------AG--GN------AAGGCAAG------------AGCGG-CGTT-CGCCATGCT------CAAGAACATCTGGGCCTCNA---AGAACATTCGCAT--GAC-CACCAAAN-TGCGNATCTTCAAC-TCCAACGTNAA-ATCCGTCCTTCTTTACGGA-NCGGAAACATG--GNGGACNAC-------GAANACAGNNCTGCAGAAGATCCAGACA-TTTTACGNCA-CC--GNCT-AGGCGCATCTTTAGCATCCGATGGCCTGAA--AGGATC-ACAAACGA--AGGACTGTGGA--AGAGCAAATCAGGAA---C--T-------CAAATNAGG-------TGAAG--GAANTGGGGTT--GGATTGGACACACTNTGCG-AAGCCAC---CA---ACCAACATCGCAT--CAGG-C-C-TG-ACTCGGAACCCGCGGGGCAAGAGAAAG-AAGGGATGTCCAA----A-AACACCCG-GAGGCGAGATACGGA-G-------TCGG-AATTGAAAGAACATG---NCGCCACCTGGNAAGGNGCANCNCGAGCAGCCCAGAACTGTGTTCGCCGGAGGACTGTCGTNNATGGCCNATGTTCCTTACGGAACGACATACCTAAGTAAGTA
Reference ( gi|1 ) : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGC-------G--AGACACGTGTGAAGAATTCCTCGGCAGAAGGAAGACTCAACATTCAACACAAGGAGTGGATCTCGACTGATACCATTAGAAAATTGGATGAGAGGAATGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCAGCAAAGGCAAAGGCTCAAAAGCAGCGGGACAAGGAAATTTG-AGAGAGC-TGTAC-ATGGTCACCAAGAAGCTCTC----AAACAAGTTCCAGCAGACT-----GAAAAACCAGTGAAGGAAAAGAACGGAAACCCTCTCACAACAACTGAAGATCAATTGAAGAGAAGGGTAGAACACTTT-AG-AGATCTGCTTTACTGCTTAACAGA--CC-AACACTAGA-CAC-T--CCACC--------GGAT-AT--ACAGCCAGCTGA--TATAGATCTCCC--AATCA-ACCGTGACAAA-CCAACAAA--------------ATCAGAGAC-CA-------GGAGAGCT-ATTACCACACTTAAGAATGGAAAA--TCACCAAGGC-CTGCTGAAATACCAGCGGAAGC-CATCAAAGCTGACATTGAGACAGCTATAGAC----ATCCTGTATA-ACCTCTTCAAGA----TCTCGGAGGAAG----AATAC-ATCTCTGAAGAGTGGAAAGAGGGTATCCTCATTAAGCTGCC--AAAGAAGGGAGATTTGAGGAACAGC---AACAACTATCGAGGAATAATGCTCCTGTCA----GTGCCCGGCAAAGTCCTCAAAAGAATTCTT--CTCGAGAGGATTAAA----GAA--GCAGAGGACCCAAAGCTCCGTGACCAGCAGTCTGGTTTAAGGCGAAACAGAAAATGTGCCGATCAAACAGCCAGCCTACGCATT--AT-CATC---GAACAAT-CACTGGAGT-GGAAGTCCC--CTCTATATGTCAACTT-TATAGACGA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGAT-AC-TG--TGG------AA-GA------TAC-TGAGG---------CAC-TATGG----AATA-TCTG-AGAAGTTCG------TCTCC------CTCATTCGTAACAC-CTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGTCAGATGCCG--GAAAGTTTCGAGGTCAAGACAGGAGTTCGACAAGGATGCTTGCTG-TCACCATTTCTGTTCCTCC--TGGTCATTGATTGGATCATGACGACCATCACGAGGGGAAGGAACAATTGCATACAGTGGACA-CTCCTGACACAACTGTATGATATCGACTTCGCCGATGACCTGGCTCTCTTGTCGCACAACCAC----AGACA--TGCATGACAAGACAACTCGCCTTGCAACAACATCAGCAGCAACGGGTCTTAAGATCAACTTGAAGAAA-ACGGAACTGATGAAGATCAACGCCACTGTC--CA-ATCACC--AGTCACAGTTGGTGGAGATTCCATCAAAAAAGTTGA--TTCCTTCATTTACCTGAGGAGTGTAGTGGACAGACAGGGTGGTACAGACCAA----GAC------------------T----------AT--GA------AAAGCAAG------------AGTAG-CATT-CACCATGCT------CAAGAACATCTGGGCCTCAA---AGAACATTCGCAT--TAC-CACCAAAC-TGCGAATCTTCAAC-TCCAACGTAAA-ATCCATCTTACTCTATGGA-ACAGAGACATG--GAGAACTGC-------TAAAACAGCCCTGCAAAAGATCCAGACAATTTTACAACA-CT--GTCTCAGGTGAATCCTTAACATCCGATGGCCTGAA--AGGATC-ACAAATGA--AGAACTATAGAGGAGAGCAAATCAAGAA---CAATGGACATGCAAATCAGG-------TGGAG--GAAGTGGGGTT--GGATTGGACACACTCTGAGGAAGCCAC---CA---ACCAACCCCACACGACAGG-C-C-TG-ACTTGGAACCCTCAGGGCAAGAGAAAG-ATAGGACGTCCTA----G-AACACCTG-GAGGCGAGACACGGA-G-------TCAG-AATTGAAAGAGCAGG---A-ACCACCTGGCAAGAAGCAGCAAAAACAGCCTAGAACCGTGTTCGCTAGAGGACTGTCGTTGATGTTGTGTGTTCCTTACGGAACGACAGGCCTAAGT-AGTA
gi|8 : AAATAAAAAAA---------AAAC--AGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACTTGTAAAGAAATCCTTGGCAGAATGAAGACTCAACA-------CAAGAAGTGGATCTCGTCTCATACCATGAGAAAACCGGATGTGAGGAAGGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCACCAAAGGTAAAGGCTCAATA------GGTC--------TTGAAGAGGAC-TATAC-A--GCCACAAA--------C----AAAGAAGTT-AAGCGAAATATTAGGAAAGACAAACGGGGAAAAAAATCAGAGA
gi|2 : aGGACATATG-AAAGATTATGTACGATG--TAATAAGAAGCTATCTGGAAAACGAATGTAAACAA--------GAAAAAACAGTCAAAGCAAA--ACAGAAG-------GTGACATCT-AAGATCG-TTGTAG-GAAGG--AGAACATTTA-AGAAGA---------------AGCGAATTCG-AAT-TTAGAGCAT-TTACCACCTAATCTTTGGAT-ATTAACCACCAGCAAG--TA-AGG---CCCGAAATTAGACTGCGGAGCA-CCAACCAA--------------AG-AGAGAT-TAT------AGTAATCTTATGA--ACAGCTAAAAATGGTAACGCTCAGCGGAGCTCTGATAAACT-CCATCAGAAGCACA--AGAGCAGATTTTT-GACAGC-ACGGACTGGCATTCTCTACCCACTGTTTCAAGAGGAATAT--GAAGTAG----CAGACTATTCCTAAAGAATGGAAAG-GGGTA-CATAATCAAGCTCCCCCAAAGAAC-----TCTA--GAACTGTTGTATAAACTATAGAG-AATAACACT---ATTAAATTGTTCCAGGGAAA-TATTCAACCGA-TGTTTAACTAAACAGAATGAAAACAAGAAATGTGGATAAC---AAGCCACGTGACCAACAAGCAGGTTTTTCTTAAAA-AGGA---GTATCAA-CGGACCACAAGGCTACGTACCCCGT-CAT----GAACAATGTGCTGAA-T-GGAATTCCT--CCCTATATGTAGGCTTATA-AGATTACTG-AGAAAGATTTTGACAGTGTTGTGTTGACAGGGAGACGACATG--TGG------AACGC------TTCTTGGGG---------CATATATGACACTAAAA-T-TGTAAATATTTA------TCTGCAATTTTCTCAT--G-AACACTCT---------TGGCA-GCAGGGTCA-TTACA-----TAGATGACATTGA------CGGAGTTAA-ACTAGAGATCG-TAAGGATGTCTACTG-TCACCCTTTCTGTTCTTGCATTGG-CATTt
gi|14 : ACGGAAACCCTCTCACAACAACTG------AATTGAAGAAATGGGTTGAACACTTTGGG-AGATCTGC--TA------AACAGA--CCAAACAGCAGA-AACAT--CCACC--------GGATCAT--ACAGCCAGCTGATTTACAGATCGTCC--GATCA-ACTGTG-CAAATCCAACAAA--------------AT-AGAGAatagggatggaaattgaattctcccacacaataggatgaaggaacaccatgggacctccgttaacgaggtaaaactttgcagttgtcgacactctttttcacattactcggatccaaaatgccagagaaaatggccactggttgcaaacatcagcaacagttaggattaagaatagaacggacagaaggaagagaagatttaagagcaaatacattcaggatgctactttgaacatagaaaatgaagagaattaaagaagttgaaattgttacatacctttggtgtatagtggattgacaggagggaacagatcgaagcggacgtaaaacactttaaggccaaagcagacatacctgctttacttcaaaatatcttgaaatttactgatacgcaccagagtaagactgttcaacacccaatgtaagcagcgctctttgtttatgagtcagaaactgatgacaactgtattttcttaacacagatcaggatccagacattcatacggatcgcctgagacgaatttccagatcgatggcttggaccaaaatcaacgaacactaggactgtggagagagcaaaccaaatcccgatttcaaagaggagattcttgaagccgaatgggggttcaggaagggcaacactcttcgcaaaccacatacacataccaacatcgctagcaagcactatcctcggaaccgcagggaagcgcaagaagggttggccaaagagaaacacctgcgagagacctggaggtcggcacctaaaagaacaggg
gi|6 : AACCCTCTTATAACAACAGAAGAACAATGGAAGAGATGGGCAGGATATTCT-GG-AGATCTA-------G-TCAATAGA--CC-AGCGCCAGA-----------------------A--AT--ACAACCAGCCCA--TCCAAACCTCCC--GAACA-ACTGTGACAAG-TCAACAAAGACAAAGAAAAAAAACCAAAGACACAAAGATGAGGAGAGCA-ATCATCACGCTCCAAAACGGAAAA--GAGGCAGGTC-CTGACGAGATACCCGAGGAAGC-AATCAAAGCTGA----------GTTA---AC----ATCTTTCATA-ATCTCTTCAAGAAGA-TATGGGAGAGAGTGGAAATAC-----CAGAGGGGCGGAAAGAGGAAACCCT---------GCC--AAAGAAGGGAAATCTGAGGGACTGT---GGCAACTACCGTGGAATCGTGCTCCTCTCA----GTTTCCGACAAAGTCCACAAt
gi|20 : gc-------GGAGAGCT-ATTACCACACTTAAGAATG
gi|13 : CTCCTGTCA----GTGCCGGGCAAGGTTCTCAACAGAGTCCTG--CTAGAGAGGATGAAG----GAG--GCAGTTGACCCAAAGCTCCGAGACCAGTAGGCGGGCTTCTGCAGTAACATATCTTGTCCTGACCAGATCGCCAGCCTACGTATC--ATGCATCGTTGAGCAGT-CACTTGAGT-GGA---CCC--C
gi|7 : AAAGGATGAAA----GAA--GCAAATGACCCAAAGCTCCGT---CAGCAAGCTGCTTTTAGGCGAAACAGATCATGTACTGATCAAATAGCCAGCCTACACATC--AT-CATC---GAACAAT-CAATGGAGA-GGAAGGTCC--CTCTATATGTAAACTT-CATAGATTA-TG-AGAAATCTTTCGATAGCG-TG----GATCGGGAGAC-AC-TG--TGG------AA-GG------TAC-TGAGG---------CAC-TATGG----AGTA-CCTG-AGAAGCTCGTCTCTCTCTCT------CTCATTCGTAACAC-CTTCCAAGGCAAGACATGCAGGGTCGCCCTTGCT
gi|19 : gatcacaaattgccaccaacaaccaacaaaatcagagaaccacactcttaacagtggaGTCAATCTATGCACT--TT-CATA---GAACAGT-CACTGGAGT-GGAAGCCCC--CCC
gi|10 : T-TATT---GAACAAT-GAACCGAATAGGAAGTCCT--TCCTATATGTAAGCTT-TATTGATTG-TG-ATAAAGTTTTTGATGGTG-TT----GACAGGG---------G--T------------C------TTC-TGGGA---------TAT-TATGG----AGTACCCTG-ATAAA---------------------CTTATTCTTAAGAA-C-ACT------TGGCATACAGGTTCATACTTGGAGGACAACTGACG--CAAGCATTTGAAGTTAAAACTAGAGTTTGTAACGGATATCTACTA-TCACC----CTGTT
gi|15 : T-TATC---GAACAAG-CAATATAAT-GGAA-TACCAGCTC-ATACATCTGATT-CGTAGATT--TGTAAAAGGCATTCGATAACG-TA----CATAGAAAAAT-AT-TA--TGGAGATCAAA-GAAAACATTAC-AGAAGGTCACGAACCAC-TATGA----AATA-TCTG-AAAAGttgct
gi|18 : CCT--CTCTCTACACCAACTT-CATCGTTTA-TT-AGAAAGCGTTCGATACAG-TG----CACTGAGAGAC-GC-TGCACGG------AG-GC------TAC-GGAG
gi|4 : CC--TTCTACAT--CAATTC-CATAGGCTA-CT-AGAAGGCATTCGACAGTG-TA----GATAGAGAGAC-GC-TG--TGG------AA-GC------TGC-TGAGA---------CAT-TACGG----AGTT-CCCC-AGAAGATCA------TCTCC------CTCATCCGCTGCAC-CTTCCA-GGAATGAGTTGCAAGATCGCGCA-GCTG-TCAGAC---------AGTTTCGGGGTGAAGACTGGAGTACGTCAGGGTTGCATTCTG-TCGCCATTCCTCTTCTTCC--TGGTCATTGATTGGATCTTGAAGACCACTACAACAGGCAGGAAAAATGTTATACATTGGGGGGCTCTGGACACAGTTGGATGACCTCGACTTTGCGGACGATCTGGCACTTCTGTCACACAGCTACTCCCAGA----TGCAGGACAAGACCACTCGCCTTGAAACAAAATCAGCAGAGACAGGGCTTAAAATCAGCA-GAAAAAATACCGAACTGATGAAGATCAACACTACTGCCAACA-A--ACC--AGTCACAGTCGGTGGAGAGCCTATCAGAGAGGTGGA--GTCTTTTGTCTACCTGGGAAGTGTGATCGACAAGCACGAGGGCACAGACCGA----GACG-----------------TCACAGCAAGGATTGGC------AAGGCAAG------------AGGGG-CTTC-CGTAATGTT------GAAGAACATCTGGGCCTCCA---AACAGATCAGTAG--GAA-GACGAAAA-TGCGCATCTTCAAT-TCCAACGTTAA-ATCCGTTCTTCTTTACGGA-TGTGAAACATG--ACGGACGAC-------AAAGACA
gi|3 : a--TGG------AA-GA------TAC-TGAGG---------CAC-CATGG----AGTA-CCCG-AGAAGCTCG------TCTCT------CTCATTCATAACAC-CTACCAAGGCATAACATGCAGAGTTGCCCATGCTGGCCAGATGTCG--GAAAGTTTCGAGGTCAAGACAGGAGTTCAACAAGGATGCTTGCTGTTCATCAatgcatttttcaacacctgcctaag
gi|12 : aagcaaca----AGTA-ACCG-AGAAACTCT------TCTCC------CTGTTCCGCAGCAC-CTACCAAAGCATGACATGCAGGGTCGCCTACCCTGGCCAGATGTAC--GAGAGTTTCGAGGTAAAAACAGAAAATCGACGAGAATGTTTGCTG-TCGTCGTTCCTCTTCCTTA--TGGACTTCGACTGAACCATGAGGACCAcgacaggtaggagcaatggaatacagtggacactcctaacacaactggatgatctcgacttagccaatgacctagctctcctctcgcaaaaccacaggcagatgcagggcaagacaactcgccttacaacgataacagcaggaacagatctcaagatcaaattgaagaaaatgcagaggatgaagatcaacaccactgtccaatcaccagtcacagttggtggagagtccatcaaagaagtggattccttcatttacctggtgagtgtagtggacagacaagatggcaaaaaccaagacatcatgacaagtcaagaataggaaaagcaagagaagtattcaccatgctcaagaacatctgggcctcaaagaacatttgcattaccaccatacggtgaatcttcaacttcaatgtaaagtccatcttactttatggagtggagacatggagaactatgaacacagccctgcaaaagatccagacattttacaacacctgtcccaggtgcatccttaacatccgatggcctgaaaggatcacaaataatcaggtgaaggaagtggggttggattggacacactgtgaacaacaccgcaaaccaggccctgacttggaacccacagggcaagagaaagaagggatgtcctaggaacacccggaggcaagatacggagttggaattgaaagaacatgacaccacctggcaagaaacagcaaaagcagcccagaactgtgttcgctggaggactgtcattgatggccgatgttccttacagaacgaca
gi|3 : gtCATCACGACAGGTAGGAGCAATGGAATACAGTGGACA-CTCCTAACACAACTGGATGATCTCGACTTAGCCAATGACCTAGCTCTCCTCTCGCAAAACCAC----AGGCAGATGCAGGGCAAGACAACTCGCCTTACAACGATAACAGCAGGAACAGATCTCAAGATCAAATTGAAGAAA-ATGCAGAGGATGAAGATCAACACCACTGTC--CA-ATCACC--AGTCACAGTTGGTGGAGAGTCCATCAAAGAAGTGGA--TTCCTTCATTTACCTGGTGAGTGTAGTGGACAGACAAGATGGCAAAAACCAA----GACATCATGACAAGTCAAGAAT----------AG--GA------AAAGCAAG------------AGAAG-TATT-CACCATGCT------CAAGAACATCTGGGCCTCAA---AGAACATTTGCAT--TAC-CACCATAC-GGTGAATCTTCAAC-TTCAATGTAAA-GTCCATCTTACTTTATGGA-GTGGAGACATG--GAGAACTAT-------GAACACAGCCCTGCAAAAGATCCAGAC-ATTTTACAACACCT--GTCCCAGGTGCATCCTTAACATCCGATGGCCTGAA--AGGATC-ACAAATAA--
gi|9 : aagcaacatggaagatactgaggcaccatggagtacccgagaagctcgtctctctcattcataacacctaccaaggcataacatgcagagttgcccatgctggccagatgtcggaaagtttcgaggtcaagacaggagttcaacaaggatgcttgctgttGGAACAACGATATAAACTG-ACA-CTCCTGAGACA---GT-----------TTAACCGATGACCTGGCTTTCCTCTAGCACAG--------------------GACAAGACAATTCGTCTCGCAACACCATTAACtcaggtgaaggaagtggggttggattggacacactgtgaacaacaccgcaaaccaggccctgacttggaacccacagggcaagagaaagaagggatgtcctaggaacacccggaggcaagatacggagttggaattgaaagaacatgacaccacctggcaagaaacagcaaaagcagcccagaactgtgttcgctggaggactgtcattgatggccgatgttccttacagaacgaca
gi|5 : AACGGGTCTCAAGATCAACttgaacgattagctaaaacgattcgcagtgagttggtagcgagcctatcagaatagtcgagtccttcgtttacctggggagtgtggtggacagacaggggtgccatgtcaagaatcgctaaggcatatatcacaa
gi|16 : aactggAG-ACGGAGCTAATGAAGATGAACACCACT--C--CATAT-ACCCAAGTCTCAATCGGTGGAGAACTCAT-GAGAGGGTGGA--GTCCTTCATTTACCTGAGACGTATAGTTGACAAGCATGGAGGCAattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcccatcagatgaaccgagtccttcgattatggagtgtggtgaacagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcagtgttcaccatgctcaagaacatttagccctccaaggacatccacatgaccaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcgtagaagatccaaacatttcacatcacctaggctaagcgcatctttagcatccaatggcctgaaaagaacacaaatgaggaactgtaaaggaaatcaggacaagaactgatagaccttacggaagctattattcagcatcacattccaggtcctgacttgaaacccgcgaggtaagagaaagcgcgggaattccagaaacacatggaagcgagatatggagaaaacattcatgattgaaagcatgtgtcgccacctggaaaggtgcacctcgagtagctcagaactgtatttgtcggaggactcgtgtatgacctatgttccttacggaacgatatacctaagtaagta
gi|9 : AGTTGGTAGCGAGCCTATCAGAATAGTCGA--GTCCTTCGTTTACCTGGGGAGTGTGGTGGACAGACAGGG
gi|5 : ggaacaacgatataaactgacactcctgagacagtttaaccgatgacctggctttcctctagcacaggacaagacaattcgtctcgcaacaccattaacttgaacgattagctaaaacgattcgcagtgCCATCAGATGAACCGA--GTCCTTCGATTAT----GGAGTGTGGTGAACAGACANNNNNNNNNNNNNNNN----NNN------------------N----------NN--NN------NNNNNNNNNNNNNNNNNNNNAGCAG-TGTT-CACCATGCT------CAAGAACATTTAGCCCTCCA---AGGACATCCACAT--GAC-CACCgtgccatgtcaagaatcgctaaggcatatatcacaa
gi|2 : aactggaacgggtctcaagatcaacattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcATTAAAGAAGTTGAAATTGTTACAT--ACCTTTGGTGTATAGTGGATTGACAGGAGGGAACAGATCGAAGCGGACG-----------------T----------AA--AACACTTTAAGGCCAA------------AGCAGACAT---ACC-TGCTTTACTTCAA-AATATCT-----T-------GAA-ATTTAC-TGATACGCACCAGAG-TAAGACTGTTCAACACCCAATGTAAGCAGCGCTCTTTGTTTATGAG-TCAGAAAC-TGATGACAACTGTATTTTCTTAACACAGATC-----AGGATCCAGACATTCATACGG-A-TC--GCCTGAGACGAATTTCCAG-AT-CGATGGCTTGGACCAAAATCAACGAAC-ACTAGGACTGTGGA-GAGAGCAAACCA--AATCCCGAT-----TTCAAA-GAGGAGATTCTTGAAGCCGAATGGGGGTTCAGGAAGGGCAACACTCTTCGCAAACCACATACACATACCAACATCGC-TAGCAAG-CAC-TATCCTCGGAA-CCGCAGGG-AAGCGCAAG-AAGGGTTGGCCAAAGAGA-AACACCTGCGA---GAGACCTGGAGG-------TCGGCACCTAAAAGAACAGG---nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcgtagaagatccaaacatttcacatcacctaggctaagcgcatctttagcatccaatggcctgaaaagaacacaaatgaggaactgtaaaggaaatcaggacaagaactgatagaccttacggaagctattattcagcatcacattccaggtcctgacttgaaacccgcgaggtaagagaaagcgcgggaattccagaaacacatggaagcgagatatggagaaaacattcatgattgaaagcatgtgtcgccacctggaaaggtgcacctcgagtagctcagaactgtatttgtcggaggactcgtgtatgacctatgttccttacggaacgatatacctaagtaagta
gi|11 : ggacatatgaaagattatgtacgatgtaataagaagctatctggaaaacgaatgtaaacaagaaaaaacagtcaaagcaaaacagaaggtgacatctaagatcgttgtaggaaggagaacatttaagaagaagcgaattcgaatttagagcatttaccacctaatctttggatattaaccaccagcaagtaaggcccgaaattagactgcggagcaccaaccaaagagagattatagtaatcttatgaacagctaaaaatggtaacgctcagcggagctctgataaactccatcagaagcacaagagcagatttttgacagcacggactggcattctctacccactgtttcaagaggaatatgaagtagcagactattcctaaagaatggaaaggggtacataatcaagctcccccaaagaactctagaactgttgtataaactatagagaataacactattaaattgttccagggaaatattcaaccgatgtttaactaaacagaatgaaaacaagaaatgtggataacaagccacgtgaccaacaagcaggtttttcttaaaaaggagtatcaacggaccacaaggctacgtaccccgtcatgaacaatgtgctgaatggaattcctccctatatgtaggcttataagattactgagaaagattttgacagtgttgtgttgacagggagacgacatgtggaacgcttcttggggcatatatgacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattgacggagttaaactagagatcgtaaggatgtctactgtcaccctttctgttcttgcattggcattatagggatggaaattgaattctcccacacaataggatgaaggaacaccatgggacctccgttaacgaggtaaaactttgcagttgtcgacactctttttcacattactcggatccaaaatgccagagaaaatggccactggttgcaaacatcagcaacagttaggattaagaatagaacggacagaaggaagagaagatttaagagcaaatacattcaggatgctactttgaacatagaaaatgaagaga----GAC------------------A----------AG--GC------AAGGCAAG------------AG-GG-CATTTCGTAATGTT------GAAGAACATTTGGGCCTCAAAACAGATCAGTTGAAA--GA-----CAAACATGCGCATCCTTAAT-TTCAACGTTAA-ATCAGTCCTTCTTTACGGATGC-GAAGCATG--GCGGACGAC-------AAAGACAATGCTGg
gi|5 : gctgagacgtcacagcaaggattGTAGAAGATCCAAACA-TTTCACATCA-CCTAGGCT-AAGCGCATCTTTAGCATCCAATGGCCTGAA--AAGA---ACA------------------------CAAATGAGGAA---C--TGTAAAGG-AAATCAGG--------ACAA--GAACTGA----------TAGAC---CT-TACGGAAGCTAT---TA---TTCAGCATCACATTCCAGGTC-C-TG-ACTTGAAACCCGCGAGGTAAGAGAAAGCGCGGGAATTCCAG----A-AACACATG-GAAGCGAGATATGGA-GAAAACATTCAT-GATTGAAAG--CATGTGTC-GCCACCTGGAAAGGTGCACCTCGAGTAGCTCAGAACTGTATTTGTCGGAGGACT--CGTGTATGACCTATGTTCCTTACGGAACGATATACCTAAGTAAGTAtt
gi|17 : aactggaacgggtctcaagatcaacattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcccatcagatgaaccgagtccttcgattatggagtgtggtgaacagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcagtgttcaccatgctcaagaacatttagccctccaaggacatccacatgaccaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcTTAACATCCAATGGCCTGAA--AGGAAC-ACAA-TGA--AGAACTATGAAGCAGAGCAAATCAAGAA--------------CGAATAAGG----------------AGTGGGATT--GGATTGGACACACTTTG
gi|3 : AATCAGG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTGTGAA-----------CA---AC--ACCGCAAAC--CAGG-C-CCTG-ACTTGGAACCCACAGGGCAAGAGAAAG-AAGGGATGTCCTA----GGAACACCCG-GAGGCAAGATACGGA-G-------TTGG-AATTGAAAGAACATG---ACACCACCTGGCAAGAAACAGCAAAAGCAGCCCAGAACTGTGTTCGCTGGAGGACTGTCATTGATGGCCGATGTTCCTTACAGAACGACA
Alignments
lowQualScore : 111111111111111111111111111111111111111111
lowQualScore : 888888888 22 4444444444 6666666 5555555555555555 11 2 222222 44444444 1 55555555 1 111 22 1 99999999999999999999999999999999999999999999999999999 1 11 11 3 1 1 111111 66666666666666666666666666 222 2 22 5555555555555555555555 222 2222 1 44444444444444 1 1111111111111 2222 2222 1 222222 1 2222 11 444 1 11111 1111 1111 11111111111111111 222222222 2222222 11 3 22222 1 1 22222 2222 11111 11 11 1 7777777777777777777777777 111 111 222222 22222222222222 11 22222 111 1111 888888888888888888888888888888888888888888 33333333333 11 111 111 111 44444444444 1 1 22222222 11 1111 44444 333333333333333333333333333333333333333333 11 444444444444444444444 444444 2 1 1 11 2222222 11 1 3333333 1 1
lowQualScore : 000000000 77 0000000000 3 4 3 5555555 4 2 2 4 2 2 4 8888888888888888 1 44 11 3 777777 22 6 77777777 0 4 0 66666666 0 22 7 11 1 444 2 22 55 00 3 4 66 0 3 00000000000000000000000000000000000000000000000000000 0 33 44 33 6 0 0 44 2 0 999999 77777777777777777777777777 1 0 2 7 2 1 1 444 0 1 3 0 11 7 22 11 7 0 1 3333333333333333333333 44 555 6 4444 5 1 77777777777777 1 0 0 0 7 1 2 1 6666666666666 99999 6 0 5555 222 11 77 888 2 1 1111 3 6 2 1 1 2 1 333333 0 1 0 1111 33 2 2 2 6 55 22 222 0 0 2 2 11111 5 3333 0 1 77 5 44 1 1 5 55 5 1 0 5 2222 7777 66 88888888888888888 5 222222222 5 5 5 0000000 3 6 0 1 1 3 4 33 2 6 1 1 11 0 55555 0 4 1 2 55555 6 0 4444 33333 1 77 11 1 88888888 666 1 0 3333333333333333333333333 444 0 3 2 4 1 33 33 444 0 8 333333 1 0 8 8 77777777777777 11 00000 2 3 1 000 1 1 1 4444 666666666666666666666666666666666666666666 11111111111 00 666 6 99 1 1 1 3 111 2 2 111 9 3 1 8 1 8 1 1 000 0 1 6 1 11111111111 1 22 3 0 4 0 0 555 99999999 2 11 1 8 3 4444 4 1 22222 666666666666666666666666666666666666666666 1 11 11 1 888888888888888888888 666666 0 0 0 2 22 2 6 11 1 7777777 44 0 0 33 0 2222222 0 7 1 0 1 11 1 888 0 7 22 3 1 3 5
lowQualScore : ......... .. .......... . . . ....... . . . . . . . ................ . .. .. . ...... .. . ........ . . . ........ . .. . .. . ... . .. .. .. . . .. . . ..................................................... . .. .. .. . . . .. . . ...... .......................... . . . . . . . ... . . . . .. . .. .. . . . ...................... .. ... . .... . . .............. . . . . . . . . ............. ..... . . .... ... .. .. ... . . .... . . . . . . . ...... . . . .... .. . . . . .. .. ... . . . . ..... . .... . . .. . .. . . . .. . . . . .... .... .. ................. . ......... . . . ....... . . . . . . . .. . . . . .. . ..... . . . . ..... . . .... ..... . .. .. . ........ ... . . ......................... ... . . . . . .. .. ... . . ...... . . . . .............. .. ..... . . . ... . . . .... .......................................... ........... .. ... . .. . . . . ... . . ... . . . . . . . . ... . . . . ........... . .. . . . . . ... ........ . .. . . . .... . . ..... .......................................... . .. .. . ..................... ...... . . . . .. . . .. . ....... .. . . .. . ....... . . . . . .. . ... . . .. . . . .
lowQualScore : 000000000 55 0000000000 0 0 0 0000000 0 5 5 0 5 5 0 2222222222222222 0 00 77 7 000000 00 7 33333333 7 0 7 33333333 7 00 3 33 0 333 5 22 88 22 2 0 88 0 2 55555555555555555555555555555555555555555555555555555 0 88 55 88 5 0 0 55 0 0 555555 11111111111111111111111111 0 2 5 0 0 0 0 333 7 0 7 7 77 3 00 33 3 7 0 7777777777777777777777 33 000 7 7777 0 0 33333333333333 0 7 7 7 3 0 0 0 7777777777777 00000 7 7 7777 777 77 77 000 5 0 2222 0 5 5 0 0 0 0 222222 8 0 0 2222 88 0 5 5 5 22 00 222 8 5 0 5 66666 7 0000 7 0 99 7 44 0 7 7 99 7 0 4 7 1111 7777 99 11111111111111111 0 999999999 7 7 2 2222222 2 3 6 0 0 7 0 55 2 4 0 0 00 0 00000 5 2 0 8 00000 5 2 0000 22222 0 66 00 4 22222222 222 0 0 8888888888888888888888888 000 6 2 8 6 0 55 88 444 2 0 000000 0 8 0 0 66666666666666 00 00000 2 9 0 000 7 0 0 2222 000000000000000000000000000000000000000000 77777777777 00 888 7 22 0 0 0 3 777 5 2 777 0 8 0 0 0 0 4 4 666 8 0 4 0 44444444444 0 00 2 2 2 0 0 555 55555555 5 00 4 0 8 6666 6 4 00000 888888888888888888888888888888888888888888 0 00 66 0 999999999999999999999 888888 0 0 0 0 88 0 5 22 2 2222222 55 2 8 88 0 5555555 0 3 0 7 0 77 0 333 7 3 00 7 0 0 5
consensus : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGACA------TTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-TAAGCGAA-T-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT-GGAGATCTGCTN--------AA-CAGAC-C-AACGCCAG-A-ACA--T-CCACC--------GGAT-AT--ACAGCCAGCCGA--TACAGACCTCCCGATCA-ACTGTGGCAAA-CCAACAAA---AN-AGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGC-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGAC-TT--GACAGCTACGGAC--GCATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAGGNAG----AATAC-ATCCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCT-CCCCAAAGAAGGGAGATCTGAGGAAC-GCTGTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGA----AAGAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGGTCATT-----GATTGGATCNTGANGA-----CCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCA-----CAG--CCAC----AGACA--TGCAGGACAA---GACAACTCGCCTTGCAACAACATCAGCAGGAACGGGTCTTAAGATCAACNTGAAGAAA-ACGGA------GCTGATGAAGATC-AACACCAC-TGC--C--CA--ATCACC--AGT-----CACAGTCGGTGGAGAGCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCNCTGCAAAAGATCCAGACA-TTT-TACAACACCT-G-CCT-AGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTGTGGAG-AGAGCAAATCAA-----GAA---------T-CAAAT-AGG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC-----CA-ACCAACACCGC--AC--CAGGCC-CTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC-AG----GAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
Reference ( family-19 ) : AAATAAAAAAA---------AAAC--AGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACTTGTAAAGAAATCCTTGGCAGAATGAAGACTCAACA-------CAAGAAGTGGATCTCGTCTCATACCATGAGAAAACCGGATGTGAGGAAGGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCACCAAAGGTAAAGGCTCAATAG--GTCGGACA------TNTGAAGAGGNCATGTACGATGGCCANNAAGAAGCTATCTGGAAAACGAGTNTAAGCGAAATATTAGGAAAGANNAGCCGGGGNAAAAAA-CGGAAACCCTCTCGTAACAACTGAAGA-CAATTGAAGAGATGGGCAGAACATTTT-GGAGATCTG-----------AA-CGGAC-C-AACGNCAG-A-AC---T-CCACC--------GGAT-AT--ACAACCAGCCGA--TACAGACC-CCCGATCA-ACTGCGGCGAA-CCAACAAA---AN-AGA------------GAC-ACA-------GGAGAGCTATNACCACGCTTAAAAACGGNAANGCNCGGCGGGNCTCTGACGAGNTACCNNCGGAAGCANATCAGAGCNGATTTTT-GACAGCTACGGACTGGCATCCTCCACNCACCGCTTCAAGAGGAATATGGGAGGNAGTGGANANACTATTCCNGAGGGGCGGAAAGAGGGNACCNTAATCAAGCTNCCCCAAAGAANGGAAATCTGAGGGACTGTTGTGNNAACTACNGNGGAATCGCGCTCCTNTCA----GTTCCGGGCAAAGTNCTCAACNGAGTNCTNAAC--TAGANA-GGATGA----AAGAA--GCGGATGACCCAAAGCTCCGTGACCAGCAAGCGGGTTTTTGNNGAAACAGATC-TGTACCGACCGGATCGCCAGCCTACGCA--CCGT-CATC---GAACAATCANTG--GAGT-GGAAGTCCCCCCTATACGTNAGCTTCAT-AGATTA-TG-AGAAAGCNTTCGATAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGNCGGAAAGTTTCGAGGTNAAGACTGGAGTTCGNCAAGGATGTCTGCTGTCGCCGTTCCTNTTCTTNC--TGG-CATT-----GACTGGACCNTGAGGA-----CCACCACGACAGGC---AGGAACAACGNTATACANTGGACG-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTCTCGCA-----CAG--CCAC----AGG----TGCAGGACAA---GACAACTCGCCTCGCAACGANATCAGCAGGAACGGGTCTCAAGATCAACNTGAAGAAA-ACGGA------GCTGATGAAGATC-AACACCAC-TGC--C--CA--AT-ACC--AGT-----CACAGTCGGTGGAGAGCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACANGAGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CGTT-C--GCCATGCTCAAGAACATCTGGGCCTCNAA---GAACATTCGCATGAC---CACCAAANTGCGNATCTTCAAC-TCCAACGTNAA-ATCCGTCCTTCTTTACGGANCGGAAACATGGNGGACNAC-G---------AANACAGNNCTGCAGAAGATCCAGACA-TTT-TACGNCACC--G-NCT-AGGCGCATCTTTAGCATCCGATGGCCTGAA--AGGATCA-CAAACGA-AGGACTGTGGA--AGAGCAAATCAG-----GAAC--------T-CAAATNAGG-------TGAAG--GAANTGGGGTT--GGATTGGACACACTNTGCG-AAGCCAC-----CA-ACCAACATCGC--AT--CAGG-C-CTG-ACTCGGAACCCGCGGGGCAAGAGAAAGAA-GGGATGTCC-AA----AAACACCCGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACATGNCGCCACCTGGNAAGGNGCANCNCGAGCAGCCCAGAACTGTGTTCGCCGGAGGACTGTCGTNNATGGCCNATGTTCCTTACGGAACGACATACCTAAGTAAGTA
gi|1 : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGC-------G--AGACACGTGTGAAGAATTCCTCGGCAGAAGGAAGACTCAACATTCAACACAAGGAGTGGATCTCGACTGATACCATTAGAAAATTGGATGAGAGGAATGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCAGCAAAGGCAAAGGCTCAAAAGCAGCGGGACAAGGAAATTTGA-GAGAGC-TGTAC-ATGGTCACCAAGAAGCTCTC----AAACAAGTTCCAGCAGACT-----GAAAAACCAGTGAAGGAAAAGAA-CGGAAACCCTCTCACAACAACTGAAGATCAATTGAAGAGAAGGGTAGAACACTTT-AGAGATCTGCTTTACTGCTTAA-CAGAC-C-AACACTAG-ACAC---T-CCACC--------GGAT-AT--ACAGCCAGCTGA--TATAGATCTCCCAATCA-ACCGTGACAAA-CCAACAAA---ATCAGA------------GAC--CA-------GGAGAGCTATTACCACACTTAAGAATGGAAAATCAC--CAAGGC-CTGCTGAAATACCAGCGGAAGC-CATCAAAGCTGACATTGAGACAGCTATAGAC----ATCCTGTATA-ACCTCTTCAAGA----TCTCGGAGGAAG----AATAC-ATCTCTGAAGAGTGGAAAGAGGGTATCCTCATTAAGCTGCC--AAAGAAGGGAGATTTGAGGAACAGC---AACAACTATCGAGGAATAATGCTCCTGTCA----GTGCCCGGCAAAGTCCTCAAAAGAATTCTT--C--TCGAGA-GGATTA----AAGAA--GCAGAGGACCCAAAGCTCCGTGACCAGCAGTCTGGTTTAAGGCGAAACAGAAAATGTGCCGATCAAACAGCCAGCCTACGCA--TTAT-CATC---GAACAATCACTG--GAGT-GGAAGTCCCCTCTATATGTCAACTTTAT-AGACGA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGATA-C-TG--TGG------AA-G------ATAC-TGAGG---------CAC-TATGGAATATCT-GAGAAGTTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGTCAGATGCCGGAAAGTTTCGAGGTCAAGACAGGAGTTCGACAAGGATGCTTGCTGTCACCATTTCTGTTCCTCC--TGGTCATT-----GATTGGATCATGACGA-----CCATCACGAGGGGA---AGGAACAATTGCATACAGTGGACA-CTCC--TGACACAACTGTATGATATCGACTTCGCCGATGACCTGGCTCTCTTGTCGCA-----CAA--CCAC----AGACA--TGCATGACAA---GACAACTCGCCTTGCAACAACATCAGCAGCAACGGGTCTTAAGATCAACTTGAAGAAA-ACGGA------ACTGATGAAGATC-AACGCCAC-TGT--C--CA--ATCACC--AGT-----CACAGTTGGTGGAGATTCCATCAAAAAAGTTGATTCCTTCATT---TACCTGAGGAGTGTAGTGGACAGACAGGGTGGTACAGACCAA----GAC------------------T-A-----------TGA------AAAGCAAG-----------AGTAG-CATT-C--ACCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATTAC---CACCAAACTGCGAATCTTCAAC-TCCAACGTAAA-ATCCATCTTACTCTATGGAACAGAGACATGGAGAACTGC-T---------AAAACAGCCCTGCAAAAGATCCAGACAATTT-TACAACACT--G-TCTCAGGTGAATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTATAGAGGAGAGCAAATCAA-----GAACAATGGACATGCAAATCAGG-------TGGAG--GAAGTGGGGTT--GGATTGGACACACTCTGAGGAAGCCAC-----CA-ACCAACCCCAC--ACGACAGG-C-CTG-ACTTGGAACCCTCAGGGCAAGAGAAAGAT-AGGACGTCC-TA----GAACACCTGGAGGCGAGACAC--GGA-G-------TCAG-AATTGAAAGAGCA-GGAACCACCTGGCAAGAAGCAGCAAAAACAGCCTAGAACCGTGTTCGCTAGAGGACTGTCGTTGATGTTGTGTGTTCCTTACGGAACGACAGGCCTAAGT-AGTA
gi|10 : T-TATT---GAACAATGAACC--GAATAGGAAGTCCTTCCTATATGTAAGCTTTAT-TGATTG-TG-ATAAAGTTTTTGATGGTG-TT----GACAGGG---------G--T------------------CTTC-TGGGA---------TAT-TATGGAGTACCCTGATAAA---------------CTTATTCTTAAGAAC-ACT------TGGCATACAGGTTCATACTTGGAGGACAACTGACGCAAGCATTTGAAGTTAAAACTAGAGTTTGTAACGGATATCTACTATCAC----CCTGTT-TTGC--T
gi|11 : -A-----------GGC------AAGGCAAG-----------AG-GG-CATTTC--GTAATGTTGAAGAACATTTGGGCCTCAAAACAGATCAGTTGAAAGAC---AAACA---TGCGCATCCTTAAT-TTCAACGTTAA-ATCAGTCCTTCTTTACGGATGCGAAGCATGGCGGACGAC-A---------AAGACAATGCTG
gi|12 : gctgagacgtcacagcaaggattgacaAGTAACC-GAGAAACTCT------TCTCCCTGTTCCGCAGCACCTACCAAAGCATGACATGCAGGGTCGCCTACCCTGGCCAGATGTACGAGAGTTTCGAGGTAAAAACAGAAAATCGACGAGAATGTTTGCTGTCGTCGTTCCTCTTCCTTA--TGGACTTC-----GACTGAACCATGAGGA-----CCAtt
gi|13 : gtCTCCTGTCA----GTGCCGGGCAAGGTTCTCAACAGAGTCCTG--C--TAGAGA-GGATGA----AGGAG--GCAGTTGACCCAAAGCTCCGAGACCAGTAGGCGGGCTTCTGCAGTAACATATCTTGTCCTGACCAGATCGCCAGCCTACGTA--TCATGCATCGTTGAGCAGTCACTT--GAGT-GGA---CCCC
gi|14 : A-CGGAAACCCTCTCACAACAACTG------AATTGAAGAAATGGGTTGAACACTTTGGGAGATCTGCTA--------AA-CAGAC-CAAACAGCAGAA-ACA--T-CCACC--------GGATCAT--ACAGCCAGCTGATTTACAGATCGTCCGATCA-ACTGT-GCAAATCCAACAAA---AT-AGA------------GA
gi|15 : T-TATC---GAACAAGCAATA--TAAT-GGAATACCAGCTCATACATCTGATTCGT-AGATT--TGTAAAAGGCATTCGATAACG-TA----CATAGAAAAATA-T-TA--TGGAGATCAAA-GAAAACATTAC-AGAAGGTCACGAACCAC-TATGAAATATCT-GAAAAGt
gi|16 : AG-ACGGA------GCTAATGAAGATG-AACACCAC-T----C--CAT-AT-ACCCAAGT-----CTCAATCGGTGGAGAACTCATGAGAG-GGTGGAGTCCTTCATT---TACCTGAGACGTATAGTTGACAAGCATGGAGGCA
gi|17 : TTAACATCCAATGGCCTGAA--AGGAACA-C-AATGA-AGAACTATGAAGCAGAGCAAATCAA-----GAA-----------CGAATAAGG----------------AGTGGGATT--GGATTGGACACACTTTG
gi|18 : CCTCTCTCTACACCAACTTCAT-CGTTTA-TT-AGAAAGCGTTCGATACAG-TG----CACTGAGAGACG-C-TGCACGG------AG-G------CTAC-GGAG
gi|19 : GTCAATCTATGCA--CTTT-CATA---GAACAGTCACTG--GAGT-GGAAGCCCCCCC
gi|2 : GGACA------TATGAA-AGATTATGTACGATG--TAATAAGAAGCTATCTGGAAAACGAATGTAAACAA--------GAAAAAACAGTCAAAGCAAAA---CAGAAG-------GTGACATCT-AAGA-TCGTTGTAG-GAAGG--AGAACATTTA-AGAA----G-----------AAGCGAATTC-GAATTTAG-A-GCATTTACCACCTAATCTTTGGAT-ATTAACCACCAGCAAG--TA-AGGCC-CGAAATTAGACTGCGGAGCA-CCAACCAA---AG-AGA------------GATTATA-------GTAATCTTATGAACA-GCT-AAAAATGGTAACGCTCAGCGGAGCTCTGATAAACT-CCATCAGAAGCACA--AGAGCAGATTTTT-GACAGC-ACGGACTGGCATTCTCTACCCACTGTTTCAAGAGGAATAT--GAAGTAG----CAGACTATTCCTAAAGAATGGAAAG-GGGTA-CATAATCAAGCTCCCCCAAAGAAC-----TCT--AGAACTGTTGTATAAACTATAGA-GAATAACA---CTATTAAATTGTTCCAGGGAAA-TATTCAACCGA-TGTTTAAC--TAAACA-GAATGAAAACAAGAAATGTGGATAAC---AAGCCACGTGACCAACAAGCAGGTTTTTCTTAAAAAGGA----GTATCAA-CGGACCACAAGGCTACGTACCCCGT-CAT----GAACAAT--GTGCTGAAT-GGAATTCCTCCCTATATGTAGGCTT-ATAAGATTACTG-AGAAAGATTTTGACAGTGTTGTGTTGACAGGGAGACGACATG--TGG------AACG------CTTCTTGGGG---------CATATATG
gi|2 : CGGAGTTAA-ACTAGAGATCGT-AAGGATGTCTACTGTCACCCTTTCTGTTCTTGCATTGG-CATTATAGGGA-TGGAAATTGA--ATTCTCCCAC-ACAATAGGATGAAGGAACA-C------CATGGGAC--CTCCGTTAACG-AGGTAAA--ACTTTG---CAGTTGTCGAC---ACTCTTTT-TCACATTACTCGGATCCA-----AAA----TGCCAGAGAAAATGGCCACTGG--TTGCAA--ACATCAGCA---ACAG---TTAGGATTAA---GAATAGA-ACGGACAGAAGGAAGA-GAAGATTTAAGAGCAAATACATT--CAGGAT-GCT--ACTTTGAACATAGAAAATGAAGAGA--ATTAAAGAAGTTGAAA---TTGTTACATACCTTTGGTGTATAGTGGATTGACAGGAGGGAACAGATCGAAGCGGAC-----------------GT-A-----------AAACACTTTAAGGCCAA-----------AGCAGACATA-CCTGCTTTACTTCAAAATATCT-----T-------GAA-ATTTAC-TGATACGCACCAGAGTAAGACTGTTCAACACCCAATGTAAGCAGCGCTCTTTGTTTATGAGTCAGAAAC-TGATG-ACAACTGTATTTTCTTAACACAGATC-----AGGATCCAGACA-TTCATACGG-ATC--G-CCTGAGACGAATTTCCAG-ATC-GATGGCTTGGACCAAAATCAACGAACACTAGGACTGTGGAG-AGAGCAAACCAAATCCCGATT--------T-CAAA-GAGGAGATTCTTGAAGCCGAATGGGGGTTCAGGAAGGGCAACACTCTTCGCAAACCACATACACATACCAACATCGCT-AG--CAAG-CACTATCCTCGGAACC-GCAGGG-AAGCGCAAGAA-GGGTTGGCC-AAAGAGAAACACCT----GCGAGAGACCTGGAGG-------TCGGCACCTAAAAGAACAacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattgacggagttaaactagagatcgtaaggatgtctactgtcaccctttctgttcttgcattggcattatagggatggaaattgaattctcccacacaataggatgaaggaacaccatgggacctccgttaacgaggtaaaactttgcagttgtcgacactctttttcacattactcggatccaaaatgccagagaaaatggccactggttgcaaacatcagcaacagttaggattaagaatagaacggacagaaggaagagaagatttaagagcaaatacattcaggatgctactttgaacatagaaaatgaagagaattaaagaagttgaaattgttacatacctttggtgtatagtggattgacaggagggaacagatcgaagcggacgtaaaacactttaaggccaaagcagacatacctgctttacttcaaaatatcttgaaatttactgatacgcaccagagtaagactgttcaacacccaatgtaagcagcgctctttgtttatgagtcagaaactgatgacaactgtattttcttaacacagatcaggatccagacattcatacggatcgcctgagacgaatttccagatcgatggcttggaccaaaatcaacgaacactaggactgtggagagagcaaaccaaatcccgatttcaaagaggagattcttgaagccgaatgggggttcaggaagggcaacactcttcgcaaaccacatacacataccaacatcgctagcaagcactatcctcggaaccgcagggaagcgcaagaagggttggccaaagagaaacacctgcgagagacctggaggtcggcacctaaaagaacaggg
gi|20 : ggacatatgaaagattatgtacgatgtaataagaagctatctggaaaacgaatgtaaacaagaaaaaacagtcaaagcaaaacagaaggtgacatctaagatcgttgtaggaaggagaacatttaagaagaagcgaattcgaatttagagcatttaccacctaatctttggatattaaccaccagcaagtaaggcccgaaattagactgcggagcaccaaccaaagagagattatagtaatcttatgaacagctaaaaatggtaacgctcagcggagctctgataaactccatcagaagcacaagagcagatttttgacagcacggactggcattctctacccactgtttcaagaggaatatgaagtagcagactattcctaaagaatggaaaggggtacataatcaagctcccccaaagaactctagaactgttgtataaactatagagaataacactattaaattgttccagggaaatattcaaccgatgtttaactaaacagaatgaaaacaagaaatgtggataacaagccacgtgaccaacaagcaggtttttcttaaaaaggagtatcaacggaccacaaggctacgtaccccgtcatgaacaatgtgctgaatggaattcctccctatatgtaggcttataagattactgagaaagattttgacagtgttgtgttgacagggagacgacatgtggaacgcttcttggggcatatatgacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattga-------GGAGAGCTATTACCACACTTAAGAATGggg
gi|3 : --TGG------AA-G------ATAC-TGAGG---------CAC-CATGGAGTACCC-GAGAAGCTCG------TCTCTCTCATTCATAACACCTACCAAGGCATAACATGCAGAGTTGCCCATGCTGGCCAGATGTCGGAAAGTTTCGAGGTCAAGACAGGAGTTCAACAAGGATGCTTGCTGT
gi|3 : aagcaacaCATCACGACAGGT---AGGAGCAATGGAATACAGTGGACA-CTCC--TAACACAACTGGATGATCTCGACTTAGCCAATGACCTAGCTCTCCTCTCGCA-----AAA--CCAC----AGGCAGATGCAGGGCAA---GACAACTCGCCTTACAACGATAACAGCAGGAACAGATCTCAAGATCAAATTGAAGAAA-ATGCA------GAGGATGAAGATC-AACACCAC-TGT--C--CA--ATCACC--AGT-----CACAGTTGGTGGAGAGTCCATCAAAGAAGTGGATTCCTTCATT---TACCTGGTGAGTGTAGTGGACAGACAAGATGGCAAAAACCAA----GACATCATGACAAGTCAAGAAT-A-----------GGA------AAAGCAAG-----------AGAAG-TATT-C--ACCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTTGCATTAC---CACCATACGGTGAATCTTCAAC-TTCAATGTAAA-GTCCATCTTACTTTATGGAGTGGAGACATGGAGAACTAT-G---------AACACAGCCCTGCAAAAGATCCAGACA-TTT-TACAACACCT-GTCCC-AGGTGCATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAAT----------------------AATCAG---------------------------G-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTGT--G-AA---------------CAACACCGCAAAC--CAGGCC-CTG-ACTTGGAACCCACAGGGCAAGAGAAAGAA-GGGATGTCCTAG----GAACACCCGGAGGCAAGATAC--GGA-G-------TTGG-AATTGAAAGAACATGACACCACCTGGCAAGAAACAGCAAAAGCAGCCCAGAACTGTGTTCGCTGGAGGACTGTCATTGATGGCCGATGTTCCTTACAGAACGACAtcatcacgacaggtaggagcaatggaatacagtggacactcctaacacaactggatgatctcgacttagccaatgacctagctctcctctcgcaaaaccacaggcagatgcagggcaagacaactcgccttacaacgataacagcaggaacagatctcaagatcaaattgaagaaaatgcagaggatgaagatcaacaccactgtccaatcaccagtcacagttggtggagagtccatcaaagaagtggattccttcatttacctggtgagtgtagtggacagacaagatggcaaaaaccaagacatcatgacaagtcaagaataggaaaagcaagagaagtattcaccatgctcaagaacatctgggcctcaaagaacatttgcattaccaccatacggtgaatcttcaacttcaatgtaaagtccatcttactttatggagtggagacatggagaactatgaacacagccctgcaaaagatccagacattttacaacacctgtcccaggtgcatccttaacatccgatggcctgaaaggatcacaaataatcaggtgaaggaagtggggttggattggacacactgtgaacaacaccgcaaaccaggccctgacttggaacccacagggcaagagaaagaagggatgtcctaggaacacccggaggcaagatacggagttggaattgaaagaacatgacaccacctggcaagaaacagcaaaagcagcccagaactgtgttcgctggaggactgtcattgatggccgatgttccttacagaacgaca
gi|4 : aagcaacatggaagatactgaggcaccatggagtacccgagaagctcgtctctctcattcataacacctaccaaggcataacatgcagagttgcccatgctggccagatgtcggaaagtttcgaggtcaagacaggagttcaacaaggatgcttgctgttCCTTCTACATCAATTCCAT-AGGCTA-CT-AGAAGGCATTCGACAGTG-TA----GATAGAGAGACG-C-TG--TGG------AA-G------CTGC-TGAGA---------CAT-TACGGAGTTCCC-CAGAAGATCA------TCTCCCTCATCCGCTGCACCTTCCA-GGAATGAGTTGCAAGATCGCGCA-----GC----TGTCAGACAGTTTCGGGGTGAAGACTGGAGTACGTCAGGGTTGCATTCTGTCGCCATTCCTCTTCTTCC--TGGTCATT-----GATTGGATCTTGAAGA-----CCACTACAACAGGC---AGGAAAAATGTTATACATTGGGGGGCTCT--GGACACAGTTGGATGACCTCGACTTTGCGGACGATCTGGCACTTCTGTCACA-----CAG--CTACTCCCAGA----TGCAGGACAA---GACCACTCGCCTTGAAACAAAATCAGCAGAGACAGGGCTTAAAATCAGCA-GAAAAAATACCGA------ACTGATGAAGATC-AACACTAC-TGC--CAACA--A--ACC--AGT-----CACAGTCGGTGGAGAGCCTATCAGAGAGGTGGAGTCTTTTGTC---TACCTGGGAAGTGTGATCGACAAGCACGAGGGCACAGACCGA----GAC-----------------GTCACAGCAAGGATTGGC------AAGGCAAG-----------AGGGG-CTTC-C--GTAATGTTGAAGAACATCTGGGCCTCCAA---ACAGATCAGTAGGAA---GACGAAAATGCGCATCTTCAAT-TCCAACGTTAA-ATCCGTTCTTCTTTACGGATGTGAAACATGACGGACGAC-A---------AAGACAATGC
gi|5 : aGGAACGGGTCTCAAGATCAACATatttttcaacacctgcctaag
gi|5 : aactGCCCATCAGATGAACCGAGTCCTTCGAT---TAT----GGAGTGTGGTGAACAGACANNNNNNNNNNNNNNNN----NNN-----------------NN-N-----------NNN------NNNNNNNNNNNNNNNNNNNAGCAG-TGTT-C--ACCATGCTCAAGAACATTTAGCCCTCCAA---GGACATCCACATGAC---CACCtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcccatcagatgaaccgagtccttcgattatggagtgtggtgaacagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcagtgttcaccatgctcaagaacatttagccctccaaggacatccacatgaccaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcgtagaagatccaaacatttcacatcacctaggctaagcgcatctttagcatccaatggcctgaaaagaacacaaatgaggaactgtaaaggaaatcaggacaagaactgatagaccttacggaagctattattcagcatcacattccaggtcctgacttgaaacccgcgaggtaagagaaagcgcgggaattccagaaacacatggaagcgagatatggagaaaacattcatgattgaaagcatgtgtcgccacctggaaaggtgcacctcgagtagctcagaactgtatttgtcggaggactcgtgtatgacctatgttccttacggaacgatatacctaagtaagta
gi|5 : aactggaacgggtctcaagatcaacattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGTAGAAGATCCAAACA-TTT-CACATCACCTAG-GCT-AAGCGCATCTTTAGCATCCAATGGCCTGAA--AAGAACA-CAAATGA-GGAACTGT-----AAAGGAAATCAG-----GA------------CAA--------------------GAACTG--------------ATAGACCTTACGGAAGCTAT-----TA-TTCAGCATCAC--ATTCCAGGTC-CTG-ACTTGAAACCCGCGAGGTAAGAGAAAGCGCGGGAATTCC-AG----AAACACATGGAAGCGAGATAT--GGA-GAAAACATTCAT-GATTGAAAGCATGTGTCGCCACCTGGAAAGGTGCACCTCGAGTAGCTCAGAACTGTATTTGTCGGAGGAC--TCGTGTATGACCTATGTTCCTTACGGAACGATATACCTAAGTAAGTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcgtagaagatccaaacatttcacatcacctaggctaagcgcatctttagcatccaatggcctgaaaagaacacaaatgaggaactgtaaaggaaatcaggacaagaactgatagaccttacggaagctattattcagcatcacattccaggtcctgacttgaaacccgcgaggtaagagaaagcgcgggaattccagaaacacatggaagcgagatatggagaaaacattcatgattgaaagcatgtgtcgccacctggaaaggtgcacctcgagtagctcagaactgtatttgtcggaggactcgtgtatgacctatgttccttacggaacgatatacctaagtaagta
gi|6 : aactggaacgggtctcaagatcaacattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcccatcagatgaaccgagtccttcgattatggagtgtggtgaacagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcagtgttcaccatgctcaagaacatttagccctccaaggacatccacatgaccaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcAACCCTCTTATAACAACAGAAGAACAATGGAAGAGATGGGCAGGATATTCT-GGAGATCTAGTC--------AA-TAGAC-C-AGCGCCAG-A-A------------------------AT--ACAACCAGCCCA--TCCAAACCTCCCGAACA-ACTGTGACAAG-TCAACAAAGACAA-AGAAAAAAAACCAAAGAC-ACAAAGATGAGGAGAGCAATCATCACGCTCCAAAACGGAAAAGA--GGCAGGTC-CTGACGAGATACCCGAGGAAGCA-ATCAAAGCTGA----------GTTA-------ACATCTTTCATA-ATCTCTTCAAGAAGA-TATGGGAGAGAGTGGAAATAC-----CAGAGGGGCGGAAAGAGGAAACCCTG-----------CCAAAGAAGGGAAATCTGAGGGAC---TGTGGCAACTACCGTGGAATCGTGCTCCTCTCA----GTTTCCGACAAAGTCCACAA
gi|7 : gcCTTAACAGTGGAAAAGGATGA----AAGAA--GCAAATGACCCAAAGCTCCGT---CAGCAAGCTGCTTTTAGGCGAAACAGATCATGTACTGATCAAATAGCCAGCCTACACA--TCAT-CATC---GAACAATCAATG--GAGA-GGAAGGTCCCTCTATATGTAAACTTCAT-AGATTA-TG-AGAAATCTTTCGATAGCG-TG----GATCGGGAGACA-C-TG--TGG------AA-G------GTAC-TGAGG---------CAC-TATGGAGTACCT-GAGAAGCTCGTCTCTCTCTCTCTCATTCGTAACACCTTCCAAGGCAAGACATGCAGGGTCGCCCTTGCT
gi|8 : gatcacaaattgccaccaacaaccaacaaaatcagagaaccacactAAATAAAAAAA---------AAAC--AGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACTTGTAAAGAAATCCTTGGCAGAATGAAGACTCAACA-------CAAGAAGTGGATCTCGTCTCATACCATGAGAAAACCGGATGTGAGGAAGGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCACCAAAGGTAAAGGCTCAATAG--GTC------------TTGAAGAGGAC-TATAC---AGCCACAAA----C--------AAAGAAGT-TAAGCGAAATATTAGGAAAGACAAA-CGGGGAAAAAAATCAGAGA
gi|9 : aGGAACAACGATATAAACTG-ACA-CTCC--TGAGACAGTT--------------TAACCGATGACCTGGCTTTCCTCTAGCA---------------------------CAGGACAA---GACAATTCGTCTCGCAACACCATTAACTTGAACGt
gi|9 : AGTTGGTAGCGAGCCTATCAGAATAGTCGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGTGC-CATGTCAA----GA------------------AT-C-----------GCT------AAGGCAattagctaaaacgattcgcagtgagttggtagcgagcctatcagaatagtcgagtccttcgtttacctggggagtgtggtggacagacaggggtgccatgtcaagaatcgctaaggcatatatcacaa
Alignments
lowQualScore : 1111111111111111111111111111111111111111111
lowQualScore : 333333333 11 4444444444 3333333 4444444444444444 1 222222 4444444444444 111 66666666666 111 2222 11 1 333333333 1 1111 555555555555555555555 1 11 1111 11 1 1 111111 66666666666666666666666666 33333 1 11 11 666666666666666666 1 1 1 11 2222 22222222222 1 444 2222 1 111111 1 2222 11 111 11 1111 1111 11111111111111111 222222222 2222222 11 11 2222222222 1111 111 11 11 55555555555555555555555 111 111 66666666666666666666666 222222222222 11111 111 1111 888888888888888888888888888888888888888888 33333333333 11 111 111 44444444444 11111111 11 11111 11 111 222222 3333333333333333333333333333333333333333333 11 11 33333333333 33333333 1 11 3333 11 1 3333333 1 1
lowQualScore : 777777777 77 0000000000 1 1 1 2222222 1 1 1 1 1 1 1 9999999999999999 7 6 1 3 000000 1 4444444444444 0 777 00000000000 7 0 444 2 0 2 2 4444 3 1 33 6 33 0 999999999 22 4 0 0000 3 222222222222222222222 0 33 44 7777 99 33 0 2 0 999999 77777777777777777777777777 0 0 2 7 11111 0 3 0 7 44 7 77 888888888888888888 1 3 999 3 3 7 88 1 4 4444 3 0 7 6 66666666666 3 7777 7 555 1 6 0 2 0 1111 1 1 2 0 2 1 777777 0 0 0 1111 33 2 2 2 1 22 11 555 0 7 2 11 4 5 3333 0 1 77 5 33 0 1 5 55 5 1 0 5 2222 7777 66 88888888888888888 5 222222222 5 5 5 0000000 3 6 0 1 3 1 33 0 6 1 11 33 7777777777 8 1 99 1 6 0 8888 0 222 1 11 11 1 88888888 666 1 3 1 88888888888888888888888 444 0 3 6 1 444 0 77777777777777777777777 6 0 2 555555555555 99 66666 2 3 1 000 1 1 1 4444 666666666666666666666666666666666666666666 11111111111 00 6 6 99 1 1 1 3 111 2 2 111 9 3 0 8 1 8 1 1 333 0 3 6 3 11111111111 1 44444444 8 8 11 1 8 88888 1 11 1 8 0 111 1 888888 4444444444444444444444444444444444444444444 0 11 1 0 8 00 6 0 66666666666 88888888 6 0 2 0 6 11 4 1111 2 0 0 33 0 2222222 0 88 1 0 0 0 7 1 1 5
lowQualScore : ......... .. .......... . . . ....... . . . . . . . ................ . . . . ...... . ............. . ... ........... . . ... . . . . .... . . .. . .. . ......... .. . . .... . ..................... . .. .. .... .. .. . . . ...... .......................... . . . . ..... . . . . .. . .. .................. . . ... . . . .. . . .... . . . . ........... . .... . ... . . . . . .... . . . . . . ...... . . . .... .. . . . . .. .. ... . . . .. . . .... . . .. . .. . . . .. . . . . .... .... .. ................. . ......... . . . ....... . . . . . . .. . . . .. .. .......... . . .. . . . .... . ... . .. .. . ........ ... . . . ....................... ... . . . . ... . ....................... . . . ............ .. ..... . . . ... . . . .... .......................................... ........... .. . . .. . . . . ... . . ... . . . . . . . . ... . . . . ........... . ........ . . .. . . ..... . .. . . . ... . ...... ........................................... . .. . . . .. . . ........... ........ . . . . . .. . .... . . . .. . ....... . .. . . . . . . . .
lowQualScore : 555555555 55 0000000000 0 0 0 5555555 0 0 0 0 0 0 0 2222222222222222 3 7 0 3 333333 0 3333333333333 7 777 77777777777 3 7 333 5 2 5 5 0000 2 0 22 5 88 0 555555555 88 5 0 8888 2 222222222222222222222 0 88 55 2222 55 88 0 5 0 555555 11111111111111111111111111 8 2 5 0 00000 7 3 7 3 00 3 00 000000000000000000 0 3 333 3 3 3 33 0 0 3333 7 7 3 7 33333333333 3 7777 3 777 0 7 7 5 2 2222 0 0 5 2 0 0 000000 8 2 0 2222 88 0 5 5 0 22 22 888 8 0 5 00 6 7 0000 7 0 99 7 77 7 7 7 99 7 9 4 7 1111 7777 99 11111111111111111 0 999999999 7 7 2 2222222 2 3 6 0 7 0 55 3 4 0 00 88 2222222222 0 0 44 0 5 2 5555 8 222 0 88 00 4 22222222 222 0 2 0 66666666666666666666666 000 6 2 0 0 000 6 66666666666666666666666 7 2 8 777777777777 22 77777 0 9 0 000 7 0 0 2222 000000000000000000000000000000000000000000 77777777777 00 7 7 22 0 0 0 0 777 5 2 777 0 8 6 0 4 0 4 4 000 8 2 4 2 44444444444 0 44444444 0 0 00 4 0 00000 0 00 4 0 8 888 4 000000 2222222222222222222222222222222222222222222 8 00 0 8 2 77 5 2 22222222222 55555555 5 0 5 2 5 22 2 2222 5 2 8 88 0 5555555 0 00 0 7 7 7 3 0 0 5
consensus : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGAC------ATTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-T-AAGC-G-A-T-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT--GG-AGAT--------CTGCTNAACAGAC-CAA-CGCCAGAA-CA-T---CCACC--------GGAT-AT--ACAGCCAGCCGAT--ACAGACCTCCCGA--TCA-ACTGTGGCAAA-CCAACAAA---A-NAGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGN-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGAN-TT--GACAGC-ACGGA----CATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAG--GNAGANT--A-ATNCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCT--CC-AAAGAAGGGAGATCTGAGGAAC-G-TGTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGG--TCAT-----TG---ATTGGAT-CNTGANGACCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCA-----CAGCCAC----AGACA--TGCAGGACAA---GACAACTCGCCTTGCAACAACATCAGCAGGAACGG---GTCTTAAGATCA------ACAT-------------GAAGAAA-ACGGAGCTGATGAAGATCAACACCACTGTC--CA--ATCACC--AGT-----CACAGTCGGTGGAGAGCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-G-CCT-AGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTGTGGA-G-AGAGCAAATCAA-----GA-A-----------CAAAT-AGG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC---CA---ACCAACACCGC--A--C--CAGGCCCTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC----AGGAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
Reference ( family-19 ) : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGAC------ATTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-T-AAGC-G-AAT-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT--GG-AGAT--------CTGCTNAACAGAC-CAA-CGCCAGAA-CA-T---CCACC--------GGAT-AT--ACAGCCAGCCGAT--ACAGACCTCCCGA--TCA-ACTGTGGCAAA-CCAACAAA---A-NAGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGC-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGAC-TT--GACAGCTACGGAC--GCATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAG--GNAGAAT--ACATCCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCTCCCC-AAAGAAGGGAGATCTGAGGAAC-GCTGTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGG--TCAT-----TG---ATTGGAT-CNTGANGACCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCA-----CAGCCAC----AGACA--TGCAGGACAA---GACAACTCGCCTTGCAACAACATCAGCAGGAACGG---GTCTTAAGATCA------ACNT-------------GAAGAAA-ACGGAGCTGATGAAGATCAACACCACTGCC--CA--ATCACC--AGT-----CACAGTCGGTGGAGAGCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCNCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-G-CCT-AGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTGTGGA-G-AGAGCAAATCAA-----GA-AT----------CAAAT-AGG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC---CA---ACCAACACCGC--A--C--CAGGCCCTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC----AGGAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
gi|1 : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGC-----G----AGACACGTGTGAAGAATTCCTCGGCAGAAGGAAGACTCAACATTCAACACAAGGAGTGGATCTCGACTGATACCATTAGAAAATTGGATGAGAGGAATGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCAGCAAAGGCAAAGGCTCAAAAGCAGCGGGACAAGGAAATTTG-AGAGAGC-TGTAC-ATGGTCACCAAGAAGCTCTC----AAACAAGT-TCCAGCAG-ACT-----GAAAAACCAGTGAAGGAAAAGAA-CGGAAACCCTCTCACAACAACTGAAGATCAATTGAAGAGAAGGGTAGAACACTTT--AG-AGATCTGCTTTACTGCTTAACAGAC-CAA-CACTAG-A-CACT---CCACC--------GGAT-AT--ACAGCCAGCTGAT--ATAGATCTCCCAA--TCA-ACCGTGACAAA-CCAACAAA---ATCAGA------------GAC--CA-------GGAGAGCTATTACCACACTTAAGAATGGAAAA-T-CACCAAGGC-CTGCTGAAATACCAGCGGAAGC-CATCAAAGCTGACATTGAGACAGCTATAGA----CATCCTGTATA-ACCTCTTCAA---GA-TCTCGGAG--GAAGAAT--ACATCTCTGAAGAGTGGAAAGAGGGTATCCTCATTAAGCT-GCC-AAAGAAGGGAGATTTGAGGAAC-A--GCAACAACTATCGAGGAATAATGCTCCTGTCA----GTGCCCGGCAAAGTCCTCAAAAGAATTCTT--C--TCGAGA-GGATTAAA----GAA--GCAGAGGACCCAAAGCTCCGTGACCAGCAGTCTGGTTTAAGGCGAAACAGAAAATGTGCCGATCAAACAGCCAGCCTACGCA--TTAT-CATC---GAACAATCACTG--GAGT-GGAAGTCCCCTCTATATGTCAACTTTAT-AGACGA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGATA-C-TG--TGG------AA-G------ATAC-TGAGG---------CAC-TATGGAATATCT-GAGAAGTTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGTCAGATGCCGGAAAGTTTCGAGGTCAAGACAGGAGTTCGACAAGGATGCTTGCTGTCACCATTTCTGTTCCTCC--TGG--TCAT-----TG---ATTGGAT-CATGACGACCATCACGAGGGGA---AGGAACAATTGCATACAGTGGACA-CTCC--TGACACAACTGTATGATATCGACTTCGCCGATGACCTGGCTCTCTTGTCGCA-----CAACCAC----AGACA--TGCATGACAA---GACAACTCGCCTTGCAACAACATCAGCAGCAACGG---GTCTTAAGATCA------ACTT-------------GAAGAAA-ACGGAACTGATGAAGATCAACGCCACTGTC--CA--ATCACC--AGT-----CACAGTTGGTGGAGATTCCATCAAAAAAGTTGATTCCTTCATT---TACCTGAGGAGTGTAGTGGACAGACAGGGTGGTACAGACCAA----GAC------------------T-A-----------TGA------AAAGCAAG-----------AGTAG-CATT-C--ACCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATTAC---CACCAAACTGCGAATCTTCAAC-TCCAACGTAAA-ATCCATCTTACTCTATGGAACAGAGACATGGAGAACTGC-T---------AAAACAGCCCTGCAAAAGATCCAGACAATTT-TAC--AACA-CT-G-TCTCAGGTGAATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTATAGAGG-AGAGCAAATCAA-----GA-ACAATGGACATGCAAATCAGG-------TGGAG--GAAGTGGGGTT--GGATTGGACACACTCTGAGGAAGCCAC---CA---ACCAACCCCAC--A--CGACAGG-CCTG-ACTTGGAACCCTCAGGGCAAGAGAAAGAT-AGGACGTCC----TAGAACACCTGGAGGCGAGACAC--GGA-G-------TCAG-AATTGAAAGAGCA-GGAACCACCTGGCAAGAAGCAGCAAAAACAGCCTAGAACCGTGTTCGCTAGAGGACTGTCGTTGATGTTGTGTGTTCCTTACGGAACGACAGGCCTAAGT-AGTA
gi|10 : T-TATT---GAACAATGAACC--GAATAGGAAGTCCTTCCTATATGTAAGCTTTAT-TGATTG-TG-ATAAAGTTTTTGATGGTG-TT----GACAGGG---------G--T------------------CTTC-TGGGA---------TAT-TATGGAGTACCCTGATAAA---------------CTTATTCTTAAGAAC-ACT------TGGCATACAGGTTCATACTTGGAGGACAACTGACGCAAGCATTTGAAGTTAAAACTAGAGTTTGTAACGGATATCTACTATCAC----CCTGTT-TTGC--T
gi|11 : -A-----------GGC------AAGGCAAG-----------AG-GG-CATTTC--GTAATGTTGAAGAACATTTGGGCCTCAAAACAGATCAGTTGAAAGAC---AAACA---TGCGCATCCTTAAT-TTCAACGTTAA-ATCAGTCCTTCTTTACGGATGCGAAGCATGGCGGACGAC-A---------AAGACAATGCTG
gi|12 : gctgagacgtcacagcaaggattgacaAGTAACC-GAGAAACTCT------TCTCCCTGTTCCGCAGCACCTACCAAAGCATGACATGCAGGGTCGCCTACCCTGGCCAGATGTACGAGAGTTTCGAGGTAAAAACAGAAAATCGACGAGAATGTTTGCTGTCGTCGTTCCTCTTCCTTA--TGG--ACTT-----CG---ACTGAAC-CATGAGGACCAtt
gi|13 : gtCTCCTGTCA----GTGCCGGGCAAGGTTCTCAACAGAGTCCT--GC--TAGAGA-GGATGAAG----GAG--GCAGTTGACCCAAAGCTCCGAGACCAGTAGGCGGGCTTCTGCAGTAACATATCTTGTCCTGACCAGATCGCCAGCCTACGTA--TCATGCATCGTTGAGCAGTCACTT--GAGT-GGA---CCCC
gi|14 : A-CGGAAACCCTCTCACAACAACTGAA------TTGAAGAAATGGGTTGAACACTTT--GGGAGAT--------CTGCTAAACAGAC-CAAACAGCAGAAACA-T---CCACC--------GGATCAT--ACAGCCAGCTGATTTACAGATCGTCCGA--TCA-ACTGT-GCAAATCCAACAAA---A-TAGA------------GA
gi|15 : T-TATC---GAACAAGCAATA--TAAT-GGAATACCAGCTCATACATCTGATTCGT-AGATT--TGTAAAAGGCATTCGATAACG-TA----CATAGAAAAATA-T-TA--TGGAGATCAAA-GAAAACATTAC-AGAAGGTCACGAACCAC-TATGAAATATCT-GAAAAGt
gi|16 : AG-ACGGAGCTAATGAAGATGAACACCACT--C--CAT-AT-ACCCAAGT-----CTCAATCGGTGGAGAACTCATGAGAG-GGTGGAGTCCTTCATT---TACCTGAGACGTATAGTTGACAAGCATGGAGGCA
gi|17 : TTAACATCCAATGGCCTGAA--AGGAACA-CAA-TGA-AGAACTATGAA-GCAGAGCAAATCAA-----GA-A-----------CGAAT-------------AAG--G-AGTGGGATT--GGATTGGACACACTTTG
gi|18 : CCTCTCTCTACACCAACTTCAT-CGTTTA-TT-AGAAAGCGTTCGATACAG-TG----CACTGAGAGACG-C-TGCACGG------AG-G------CTAC-GGAG
gi|19 : GTCAATCTATGCA--CTTT-CATA---GAACAGTCACTG--GAGT-GGAAGCCCCCCC
gi|2 : GGAC------ATATGAA-AGATTATGTACGATG--TAATAAGAAGCTATCTGGAAAACGAATGT-AAAC-A-A-------GAAAAAACAGTCAAAGCAAAA---CAGAAG-------GTGACATCT-AAGA-TCGTTGTAG-GAAGG--AGAACA-TTTAAGA-AGA---------------AGCGAATTCGA-ATTTAGAG-CA-TTTACCACCTAATCTTTGGAT-ATTAACCACCAGCAAGT--A-AGGCC---CGAAATTAGACTGCGGAGCA-CCAACCAA---A-GAGA------------GATTATA-------GTAATCTTATGAACA-GCT-AAAAATGGTAACGCTCAGCGGAGCTCTGATAAACT-CCATCAGAAGCACA--AGAGCAGAT-TTTTGACAGC-ACGGACTGGCATTCTCTACCCACTGTTTCAAGAGGAATAT-GAAGTAGCAGACT--A--TTCCTAAAGAATGGAAAG-GGGTACA-TAATCAAGCTCCCCCAAAGAAC-----TCTA--GAACTGTTGTATAAACTATAGAG-AATAACACT---ATTAAATTGTTCCAGGGAAA-TATTCAACCGA-TGTTTAAC--TAAACA-GAATGAAAACAAGAAATGTGGATAAC---AAGCCACGTGACCAACAAGCAGGTTTTTCTTAAAAAGGA----GTATCAA-CGGACCACAAGGCTACGTACCCCGT-CAT----GAACAAT--GTGCTGAAT-GGAATTCCTCCCTATATGTAGGCTT-ATAAGATTACTG-AGAAAGATTTTGACAGTGTTGTGTTGACAGGGAGACGACATG--TGG------AACG------CTTCTTGGGG---------CATATATG
gi|2 : CGGAGTTAA-ACTAGAGATCGT-AAGGATGTCTACTGTCACCCTTTCTGTTCTTGCATTGGCATTATAGGGATGGAAATTGAAT-TCTC----CCAC-ACAATAGGATGAAGGAAC-AC------CATGGGAC--CTCCGTTAACG-AGGTAAA--ACTTTG---CAGTTGTCGAC---ACTCTT-TTTCACATTACTCGGATCC----AAA-A--TGCCAGAGAAAATGGCCACTGG--TTGCAA--ACATCAGC---AACAGTTAGGATTAAGAATAGAACGGACA--------------GAAGGAA-GAGAAGAT--TTAAGAGCAAATACATT-----CAGGAT-GCT--ACTTTGAACATAGAAAATGAAGAGA--ATTAAAGAAGTTGAAA---TTGTTACATACCTTTGGTGTATAGTGGATTGACAGGAGGGAACAGATCGAAGCGGAC-----------------GT-A-----------AAACACTTTAAGGCCAA-----------AGCAGACATA-CCTGCTTTACTTCAAAATATCT-----T-------GAA-ATTTAC-TGATACGCACCAGAGTAAGACTGTTCAACACCCAATGTAAGCAGCGCTCTTTGTTTATGAGTCAGAAAC-TGATG-ACAACTGTATTTTCTTAACACAGATC-----AGGATCCAGAC-ATTCATACGGATCGCCT-G-----AGACGAATTTCCAG-ATC-GATGGCTTGGACCAAAATCAACGAACACTAGGACTGTGGA-G-AGAGCAAACCAAATCCCGATTT----------CAAAG-AGGAGATTCTTGAAGCCGAATGGGGGTTCAGGAAGGGCAACACTCTTCGCAAACCACATACACATACCAACATCGCT-A--G--CAAGCACTATCCTCGGAA-CCGCAGGG-AAGCGCAAGAA-GGGTTGGCCAAAGAGAAACACCT----GCGAGAGACCTGGAGG-------TCGGCACCTAAAAGAACacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattgacggagttaaactagagatcgtaaggatgtctactgtcaccctttctgttcttgcattggcattatagggatggaaattgaattctcccacacaataggatgaaggaacaccatgggacctccgttaacgaggtaaaactttgcagttgtcgacactctttttcacattactcggatccaaaatgccagagaaaatggccactggttgcaaacatcagcaacagttaggattaagaatagaacggacagaaggaagagaagatttaagagcaaatacattcaggatgctactttgaacatagaaaatgaagagaattaaagaagttgaaattgttacatacctttggtgtatagtggattgacaggagggaacagatcgaagcggacgtaaaacactttaaggccaaagcagacatacctgctttacttcaaaatatcttgaaatttactgatacgcaccagagtaagactgttcaacacccaatgtaagcagcgctctttgtttatgagtcagaaactgatgacaactgtattttcttaacacagatcaggatccagacattcatacggatcgcctgagacgaatttccagatcgatggcttggaccaaaatcaacgaacactaggactgtggagagagcaaaccaaatcccgatttcaaagaggagattcttgaagccgaatgggggttcaggaagggcaacactcttcgcaaaccacatacacataccaacatcgctagcaagcactatcctcggaaccgcagggaagcgcaagaagggttggccaaagagaaacacctgcgagagacctggaggtcggcacctaaaagaacaggg
gi|20 : ggacatatgaaagattatgtacgatgtaataagaagctatctggaaaacgaatgtaaacaagaaaaaacagtcaaagcaaaacagaaggtgacatctaagatcgttgtaggaaggagaacatttaagaagaagcgaattcgaatttagagcatttaccacctaatctttggatattaaccaccagcaagtaaggcccgaaattagactgcggagcaccaaccaaagagagattatagtaatcttatgaacagctaaaaatggtaacgctcagcggagctctgataaactccatcagaagcacaagagcagatttttgacagcacggactggcattctctacccactgtttcaagaggaatatgaagtagcagactattcctaaagaatggaaaggggtacataatcaagctcccccaaagaactctagaactgttgtataaactatagagaataacactattaaattgttccagggaaatattcaaccgatgtttaactaaacagaatgaaaacaagaaatgtggataacaagccacgtgaccaacaagcaggtttttcttaaaaaggagtatcaacggaccacaaggctacgtaccccgtcatgaacaatgtgctgaatggaattcctccctatatgtaggcttataagattactgagaaagattttgacagtgttgtgttgacagggagacgacatgtggaacgcttcttggggcatatatgacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattga-------GGAGAGCTATTACCACACTTAAGAATGaggg
gi|3 : --TGG------AA-G------ATAC-TGAGG---------CAC-CATGGAGTACCC-GAGAAGCTCG------TCTCTCTCATTCATAACACCTACCAAGGCATAACATGCAGAGTTGCCCATGCTGGCCAGATGTCGGAAAGTTTCGAGGTCAAGACAGGAGTTCAACAAGGATGCTTGCTGT
gi|3 : aagcaacaGGATGCTTGCTGTTCATCACGACAGGT---AGGAGCAATGGAATACAGTGGACA-CTCC--TAACACAACTGGATGATCTCGACTTAGCCAATGACCTAGCTCTCCTCTCGCA-----AAACCAC----AGGCAGATGCAGGGCAA---GACAACTCGCCTTACAACGATAACAGCAGGAACAG---ATCTCAAGATCA------AATT-------------GAAGAAA-ATGCAGAGGATGAAGATCAACACCACTGTC--CA--ATCACC--AGT-----CACAGTTGGTGGAGAGTCCATCAAAGAAGTGGATTCCTTCATT---TACCTGGTGAGTGTAGTGGACAGACAAGATGGCAAAAACCAA----GACATCATGACAAGTCAAGAAT-A-----------GGA------AAAGCAAG-----------AGAAG-TATT-C--ACCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTTGCATTAC---CACCATACGGTGAATCTTCAAC-TTCAATGTAAA-GTCCATCTTACTTTATGGAGTGGAGACATGGAGAACTAT-G---------AACACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-GTCCC-AGGTGCATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAAT-----------------------AATCAG-----G------------------------------TGAAG--GAAGTGGGGTT--GGATTGGACACACTGT---GAA---------------CAACACCGCAAA--C--CAGGCCCTG-ACTTGGAACCCACAGGGCAAGAGAAAGAA-GGGATGTCCT---AGGAACACCCGGAGGCAAGATAC--GGA-G-------TTGG-AATTGAAAGAACATGACACCACCTGGCAAGAAACAGCAAAAGCAGCCCAGAACTGTGTTCGCTGGAGGACTGTCATTGATGGCCGATGTTCCTTACAGAACGACAtcatcacgacaggtaggagcaatggaatacagtggacactcctaacacaactggatgatctcgacttagccaatgacctagctctcctctcgcaaaaccacaggcagatgcagggcaagacaactcgccttacaacgataacagcaggaacagatctcaagatcaaattgaagaaaatgcagaggatgaagatcaacaccactgtccaatcaccagtcacagttggtggagagtccatcaaagaagtggattccttcatttacctggtgagtgtagtggacagacaagatggcaaaaaccaagacatcatgacaagtcaagaataggaaaagcaagagaagtattcaccatgctcaagaacatctgggcctcaaagaacatttgcattaccaccatacggtgaatcttcaacttcaatgtaaagtccatcttactttatggagtggagacatggagaactatgaacacagccctgcaaaagatccagacattttacaacacctgtcccaggtgcatccttaacatccgatggcctgaaaggatcacaaataatcaggtgaaggaagtggggttggattggacacactgtgaacaacaccgcaaaccaggccctgacttggaacccacagggcaagagaaagaagggatgtcctaggaacacccggaggcaagatacggagttggaattgaaagaacatgacaccacctggcaagaaacagcaaaagcagcccagaactgtgttcgctggaggactgtcattgatggccgatgttccttacagaacgaca
gi|4 : aagcaacatggaagatactgaggcaccatggagtacccgagaagctcgtctctctcattcataacacctaccaaggcataacatgcagagttgcccatgctggccagatgtcggaaagtttcgaggtcaagacaggagttcaacaaCCTTCTACATCAATTCCAT-AGGCTA-CT-AGAAGGCATTCGACAGTG-TA----GATAGAGAGACG-C-TG--TGG------AA-G------CTGC-TGAGA---------CAT-TACGGAGTTCCC-CAGAAGATCA------TCTCCCTCATCCGCTGCACCTTCCA-GGAATGAGTTGCAAGATCGCGCA-----GC----TGTCAGACAGTTTCGGGGTGAAGACTGGAGTACGTCAGGGTTGCATTCTGTCGCCATTCCTCTTCTTCC--TGG--TCAT-----TG---ATTGGAT-CTTGAAGACCACTACAACAGGC---AGGAAAAATGTTATACATTGGGGGGCTCT--GGACACAGTTGGATGACCTCGACTTTGCGGACGATCTGGCACTTCTGTCACA-----CAGCTACTCCCAGA----TGCAGGACAA---GACCACTCGCCTTGAAACAAAATCAGCAGAGACAG---GGCTTAAAATCA------GCA--------------GAAAAAATACCGAACTGATGAAGATCAACACTACTGCCAACA--A--ACC--AGT-----CACAGTCGGTGGAGAGCCTATCAGAGAGGTGGAGTCTTTTGTC---TACCTGGGAAGTGTGATCGACAAGCACGAGGGCACAGACCGA----GAC-----------------GTCACAGCAAGGATTGGC------AAGGCAAG-----------AGGGG-CTTC-C--GTAATGTTGAAGAACATCTGGGCCTCCAA---ACAGATCAGTAGGAA---GACGAAAATGCGCATCTTCAAT-TCCAACGTTAA-ATCCGTTCTTCTTTACGGATGTGAAACATGACGGACGAC-A---------AAGACAA---TG-------------C-ATTT-TTC--AACACCT-G-CCT-AAG
gi|5 : aGGAACGG---GTCTCAAGATCA------ACATTNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--NN--NNNNNN--NNN-----NNNNNNNNNNNNNNNGCCCATCAGATGAACCGAGTCCTTCGAT---TAT----GGAGTGTGGTGAACAGACANNNNNNNNNNNNNNNN----NNN-----------------NN-N-----------NNN------NNNNNNNNNNNNNNNNNNNAGCAG-TGTT-C--ACCATGCTCAAGAACATTTAGCCCTCCAA---GGACATCCACATGAC---CACC
gi|5 : aactGTAGAAGATCCAAAC-ATTT-CAC--ATCACCTAG-GCT-AAGCGCATCTTTAGCATCCAATGGCCTGAA--AAGAACA-CAAATGA-GGAACTGT------AAAGGAAATCAG-----GA-------------CAA--------------------GAACTGA----------TAGAC---CT-TACGGAAGCTAT---TA---TTCAGCATCAC--ATTC--CAGGTCCTG-ACTTGAAACCCGCGAGGTAAGAGAAAGCGCGGGAATTCC----AGAAACACATGGAAGCGAGATAT--GGA-GAAAACATTCAT-GATTGAAAGCATGTGTCGCCACCTGGAAAGGTGCACCTCGAGTAGCTCAGAACTGTATTTGTCGGAGGAC--TCGTGTATGACCTATGTTCCTTACGGAACGATATACCTAAGTAAGTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcgtagaagatccaaacatttcacatcacctaggctaagcgcatctttagcatccaatggcctgaaaagaacacaaatgaggaactgtaaaggaaatcaggacaagaactgatagaccttacggaagctattattcagcatcacattccaggtcctgacttgaaacccgcgaggtaagagaaagcgcgggaattccagaaacacatggaagcgagatatggagaaaacattcatgattgaaagcatgtgtcgccacctggaaaggtgcacctcgagtagctcagaactgtatttgtcggaggactcgtgtatgacctatgttccttacggaacgatatacctaagtaagta
gi|6 : aactggaacgggtctcaagatcaacattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcccatcagatgaaccgagtccttcgattatggagtgtggtgaacagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcagtgttcaccatgctcaagaacatttagccctccaaggacatccacatgaccaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcAACCCTCTTATAACAACAGAAGAACAATGGAAGAGATGGGCAGGATATTCT--GG-AGAT--------CTAGTCAATAGAC-CAG-CGCCAGAA--------------------------AT--ACAACCAGCCCAT--CCAAACCTCCCGA--ACA-ACTGTGACAAG-TCAACAAAGACA-AAGAAAAAAAACCAAAGAC-ACAAAGATGAGGAGAGCAATCATCACGCTCCAAAACGGAAAAGA--GGCAGGTC-CTGACGAGATACCCGAGGAAGCA-ATCAAAGCTGAG-TT--AACA--------------TCTTTCATA-ATCTCTTCAAGAAGA-TAT-GG-G--AGAGAGTGGAAATACCAGAGGGGCGGAAAGAGGAAACCCTG----------CC-AAAGAAGGGAAATCTGAGGGAC---TGTGGCAACTACCGTGGAATCGTGCTCCTCTCA----GTTTCCGACAAAGTCCACAA
gi|7 : gcCTTAACAGTGGAAAAGGATGAAA----GAA--GCAAATGACCCAAAGCTCCGT---CAGCAAGCTGCTTTTAGGCGAAACAGATCATGTACTGATCAAATAGCCAGCCTACACA--TCAT-CATC---GAACAATCAATG--GAGA-GGAAGGTCCCTCTATATGTAAACTTCAT-AGATTA-TG-AGAAATCTTTCGATAGCG-TG----GATCGGGAGACA-C-TG--TGG------AA-G------GTAC-TGAGG---------CAC-TATGGAGTACCT-GAGAAGCTCGTCTCTCTCTCTCTCATTCGTAACACCTTCCAAGGCAAGACATGCAGGGTCGCCCTTGCT
gi|8 : gatcacaaattgccaccaacaaccaacaaaatcagagaaccacactAAATAAAAAAA---------AAAC--AGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACTTGTAAAGAAATCCTTGGCAGAATGAAGACTCAACA-------CAAGAAGTGGATCTCGTCTCATACCATGAGAAAACCGGATGTGAGGAAGGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCACCAAAGGTAAAGGCTCAATAG------GTC--------TTGAAGAGGAC-TATAC-A--GCCACAAA--------C----AAAGAAGT-T-AAGC-GAAATATTAGGAAAGACAAA-CGGGGAAAAAAATCAGAGA
gi|9 : aGGAACAACGATATAAACTG-ACA-CTCC--TGAGACAGTT--------------TAACCGATGACCTGGCTTTCCTCTAGCA-------------------------CAGGACAA---GACAATTCGTCTCGCAACACCATTAACTTGAACGt
gi|9 : AGTTGGTAGCGAGCCTATCAGAATAGTCGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGTGC-CATGTCAA----GA------------------AT-C-----------GCT------AAGGCAattagctaaaacgattcgcagtgagttggtagcgagcctatcagaatagtcgagtccttcgtttacctggggagtgtggtggacagacaggggtgccatgtcaagaatcgctaaggcatatatcacaa
Alignments
lowQualScore : 111111111111111111111111111111111111111111111
lowQualScore : 333333333 11 4444444444 3333333 4444444444444444 11 1 222222 4444444444444 1111 777777777777 111 2222 11 1 444444444 1 1111 5555555555555555555555 1 11 1111 11 1 1 111111 66666666666666666666666666 22222 1 11 11 5555555555555555555 1 1 1 11 333333 1111111111 222 4444 2222 1 111111 1 2222 11 111 11 1111 1111 11111111111111111 222222222 2222222 11 22222 1111 1111 11111 11 11 55555555555555555555555 111 6666666666666666 22222222 1111111111 11111 111 1111 888888888888888888888888888888888888888888 33333333333 11 111 111 44444444444 11111111 11 11111 11 111 222222 222222222222222222222222222222222222222222222 11 11 33333333333 33333333 1 11 3333 11 1 3333333 1 1
lowQualScore : 777777777 77 0000000000 1 1 1 2222222 1 1 1 1 1 1 1 9999999999999999 44 1 3 000000 1 4444444444444 0 6666 222222222222 7 0 444 2 0 2 2 4444 3 1 33 6 33 0 3 22 000000000 0 0000 9999999999999999999999 0 33 44 7777 99 33 0 2 0 999999 77777777777777777777777777 0 0 2 7 88888 0 3 0 7 44 7 44 2222222222222222222 1 3 999 3 3 7 88 1 1 555555 1 0 7 6 8888888888 333 7777 7 6666 1 6 0 2 0 1111 1 1 2 0 2 1 777777 0 0 0 1111 33 2 2 2 1 22 11 555 0 7 2 11 4 5 3333 0 1 77 5 33 0 1 5 55 5 1 0 5 2222 7777 66 88888888888888888 5 222222222 5 5 5 0000000 3 6 0 1 3 1 33 0 6 1 11 9 55555 3 8 1 1 5555 6 0 8888 22222 1 11 11 1 88888888 666 1 3 1 88888888888888888888888 444 0 3 33 33 0000000000000000 0 6 44444444 55 0 6 33 99 8888888888 99 66666 2 3 1 000 1 1 1 4444 666666666666666666666666666666666666666666 11111111111 00 6 6 99 1 1 1 3 111 2 2 111 9 3 0 8 1 8 1 1 333 0 3 6 3 11111111111 1 33333333 8 8 11 1 8 88888 1 11 1 8 0 111 1 888888 000000000000000000000000000000000000000000000 0 11 1 0 8 00 6 0 66666666666 88888888 6 0 2 0 6 11 4 1111 2 0 0 33 0 2222222 0 88 1 0 0 0 7 1 1 5
lowQualScore : ......... .. .......... . . . ....... . . . . . . . ................ .. . . ...... . ............. . .... ............ . . ... . . . . .... . . .. . .. . . .. ......... . .... ...................... . .. .. .... .. .. . . . ...... .......................... . . . . ..... . . . . .. . .. ................... . . ... . . . .. . . ...... . . . . .......... ... .... . .... . . . . . .... . . . . . . ...... . . . .... .. . . . . .. .. ... . . . .. . . .... . . .. . .. . . . .. . . . . .... .... .. ................. . ......... . . . ....... . . . . . . .. . . . .. . ..... . . . . .... . . .... ..... . .. .. . ........ ... . . . ....................... ... . . .. .. ................ . . ........ .. . . .. .. .......... .. ..... . . . ... . . . .... .......................................... ........... .. . . .. . . . . ... . . ... . . . . . . . . ... . . . . ........... . ........ . . .. . . ..... . .. . . . ... . ...... ............................................. . .. . . . .. . . ........... ........ . . . . . .. . .... . . . .. . ....... . .. . . . . . . . .
lowQualScore : 555555555 55 0000000000 0 0 0 5555555 0 0 0 0 0 0 0 2222222222222222 00 0 3 333333 0 3333333333333 7 7777 000000000000 3 7 333 5 2 5 5 0000 2 0 22 5 88 0 2 88 888888888 0 8888 2222222222222222222222 0 88 55 2222 55 88 0 5 0 555555 11111111111111111111111111 8 2 5 0 33333 7 3 7 3 00 3 33 7777777777777777777 0 3 333 3 3 3 33 0 0 000000 0 7 3 7 0000000000 333 7777 3 0000 0 7 7 5 2 2222 0 0 5 2 0 0 000000 8 2 0 2222 88 0 5 5 0 22 22 888 8 0 5 00 6 7 0000 7 0 99 7 77 7 7 7 99 7 9 4 7 1111 7777 99 11111111111111111 0 999999999 7 7 2 2222222 2 3 6 0 7 0 55 3 4 0 00 8 00000 2 0 0 0 0000 5 2 5555 66666 0 88 00 4 22222222 222 0 2 0 66666666666666666666666 000 6 2 55 88 8888888888888888 4 7 22222222 00 8 7 77 22 2222222222 22 77777 0 9 0 000 7 0 0 2222 000000000000000000000000000000000000000000 77777777777 00 7 7 22 0 0 0 0 777 5 2 777 0 8 6 0 4 0 4 4 000 8 2 4 2 44444444444 0 88888888 0 0 00 4 0 00000 0 00 4 0 8 888 4 000000 666666666666666666666666666666666666666666666 8 00 0 8 2 77 5 2 22222222222 55555555 5 0 5 2 5 22 2 2222 5 2 8 88 0 5555555 0 00 0 7 7 7 3 0 0 5
consensus : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGACA------TTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-TA-AGC-G--A-T-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT--GG-AGATCTGCTN--------AACAGAC-CAA-CGCCAGA-A-CAT---CCACC--------GGAT-AT--ACAGCCAGCCGAT--ACAGACCTCCCGA--TCA-ACTGTGGCAAA-CCAACAAA---AN-AGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGN-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGA-NTT--GACAGC-ACGGAC----ATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAG--GNAGANT---A-ATNCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCT-CC---AAAGAAGGGAGATCTGAGGAAC-GT-GTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGGTCATT-----GATTGGAT-CTTGANG---ACCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCA-----CAGCCAC----AGACA--TGCAGGACAA---GACAACTCGCCTTGCAACAACATCAGCAGGAACGGGTCTTAAGATCAACNT-------------GAAGAAA-AC--------GGAACTGATGAAGATC-AACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTCGGTGGAGAGCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-G-CCT-AGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTGTGGA-G-AGAGCAAATCAA-----GAA--CAA-----AT-------AGG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC---CA---ACCAACACCGC--A--C--CAGGCCCTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC----AGGAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
Reference ( family-19 ) : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGACA------TTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-TA-AGC-G--A-T-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT--GG-AGATCTGCTN--------AACAGAC-CAA-CGCCAGA-A-CAT---CCACC--------GGAT-AT--ACAGCCAGCCGAT--ACAGACCTCCCGA--TCA-ACTGTGGCAAA-CCAACAAA---AN-AGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGN-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGA-NTT--GACAGC-ACGGAC----ATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAG--GNAGANT---A-ATNCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCT-CC---AAAGAAGGGAGATCTGAGGAAC-GT-GTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGGTCATT-----GATTGGAT-CNTGANG---ACCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCA-----CAGCCAC----AGACA--TGCAGGACAA---GACAACTCGCCTTGCAACAACATCAGCAGGAACGGGTCTTAAGATCAACAT-------------GAAGAAA-AC--------GGAGCTGATGAAGATC-AACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTCGGTGGAGAGCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-G-CCT-AGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTGTGGA-G-AGAGCAAATCAA-----GAA--CAA-----AT-------AGG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC---CA---ACCAACACCGC--A--C--CAGGCCCTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC----AGGAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
gi|1 : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGC-------G--AGACACGTGTGAAGAATTCCTCGGCAGAAGGAAGACTCAACATTCAACACAAGGAGTGGATCTCGACTGATACCATTAGAAAATTGGATGAGAGGAATGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCAGCAAAGGCAAAGGCTCAAAAGCAGCGGGACAAGGAAATTTGA-GAGAGC-TGTAC-ATGGTCACCAAGAAGCTCTC----AAACAAGT-TCCAGCAG--ACT-----GAAAAACCAGTGAAGGAAAAGAA-CGGAAACCCTCTCACAACAACTGAAGATCAATTGAAGAGAAGGGTAGAACACTTT--AG-AGATCTGCTTTACTGCTTAACAGAC-CAA-CACTAGACA-C-T---CCACC--------GGAT-AT--ACAGCCAGCTGAT--ATAGATCTCCCAA--TCA-ACCGTGACAAA-CCAACAAA---ATCAGA------------GAC--CA-------GGAGAGCTATTACCACACTTAAGAATGGAAAA-T-CACCAAGGC-CTGCTGAAATACCAGCGGAAGC-CATCAAAGCTGACATTGAGACAGCTATAGAC----ATCCTGTATA-ACCTCTTCAA---GA-TCTCGGAG--GAAGAAT---ACATCTCTGAAGAGTGGAAAGAGGGTATCCTCATTAAGCTGCC---AAAGAAGGGAGATTTGAGGAAC-A--GCAACAACTATCGAGGAATAATGCTCCTGTCA----GTGCCCGGCAAAGTCCTCAAAAGAATTCTT--C--TCGAGA-GGATTAAA----GAA--GCAGAGGACCCAAAGCTCCGTGACCAGCAGTCTGGTTTAAGGCGAAACAGAAAATGTGCCGATCAAACAGCCAGCCTACGCA--TTAT-CATC---GAACAATCACTG--GAGT-GGAAGTCCCCTCTATATGTCAACTTTAT-AGACGA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGATA-C-TG--TGG------AA-G------ATAC-TGAGG---------CAC-TATGGAATATCT-GAGAAGTTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGTCAGATGCCGGAAAGTTTCGAGGTCAAGACAGGAGTTCGACAAGGATGCTTGCTGTCACCATTTCTGTTCCTCC--TGGTCATT-----GATTGGAT-CATGACG---ACCATCACGAGGGGA---AGGAACAATTGCATACAGTGGACA-CTCC--TGACACAACTGTATGATATCGACTTCGCCGATGACCTGGCTCTCTTGTCGCA-----CAACCAC----AGACA--TGCATGACAA---GACAACTCGCCTTGCAACAACATCAGCAGCAACGGGTCTTAAGATCAACTT-------------GAAGAAA-AC--------GGAACTGATGAAGATC-AACGCCACTGTC--CA-ATCA-----CC--AGT-----CACAGTTGGTGGAGATTCCATCAAAAAAGTTGATTCCTTCATT---TACCTGAGGAGTGTAGTGGACAGACAGGGTGGTACAGACCAA----GAC------------------T-A-----------TGA------AAAGCAAG-----------AGTAG-CATT-C--ACCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATTAC---CACCAAACTGCGAATCTTCAAC-TCCAACGTAAA-ATCCATCTTACTCTATGGAACAGAGACATGGAGAACTGC-T---------AAAACAGCCCTGCAAAAGATCCAGACAATTT-TAC--AACA-CT-G-TCTCAGGTGAATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTATAGAGG-AGAGCAAATCAA-----GAA--CAATGGACATGCAAATCAGG-------TGGAG--GAAGTGGGGTT--GGATTGGACACACTCTGAGGAAGCCAC---CA---ACCAACCCCAC--A--CGACAGG-CCTG-ACTTGGAACCCTCAGGGCAAGAGAAAGAT-AGGACGTCC----TAGAACACCTGGAGGCGAGACAC--GGA-G-------TCAG-AATTGAAAGAGCA-GGAACCACCTGGCAAGAAGCAGCAAAAACAGCCTAGAACCGTGTTCGCTAGAGGACTGTCGTTGATGTTGTGTGTTCCTTACGGAACGACAGGCCTAAGT-AGTA
gi|10 : T-TATT---GAACAATGAACC--GAATAGGAAGTCCTTCCTATATGTAAGCTTTAT-TGATTG-TG-ATAAAGTTTTTGATGGTG-TT----GACAGGG---------G--T------------------CTTC-TGGGA---------TAT-TATGGAGTACCCTGATAAA---------------CTTATTCTTAAGAAC-ACT------TGGCATACAGGTTCATACTTGGAGGACAACTGACGCAAGCATTTGAAGTTAAAACTAGAGTTTGTAACGGATATCTACTATCAC----CCTGTT-TTGC--T
gi|11 : -A-----------GGC------AAGGCAAG-----------AG-GG-CATTTC--GTAATGTTGAAGAACATTTGGGCCTCAAAACAGATCAGTTGAAAGAC---AAACA---TGCGCATCCTTAAT-TTCAACGTTAA-ATCAGTCCTTCTTTACGGATGCGAAGCATGGCGGACGAC-A---------AAGACAATGCTG
gi|12 : gctgagacgtcacagcaaggattgacaAGTAACC-GAGAAACTCT------TCTCCCTGTTCCGCAGCACCTACCAAAGCATGACATGCAGGGTCGCCTACCCTGGCCAGATGTACGAGAGTTTCGAGGTAAAAACAGAAAATCGACGAGAATGTTTGCTGTCGTCGTTCCTCTTCCTTA--TGGACTTC-----GACTGAAC-CATGAGG---ACCAtt
gi|13 : gtCTCCTGTCA----GTGCCGGGCAAGGTTCTCAACAGAGTCCT--GC--TAGAGA-GGATGAAG----GAG--GCAGTTGACCCAAAGCTCCGAGACCAGTAGGCGGGCTTCTGCAGTAACATATCTTGTCCTGACCAGATCGCCAGCCTACGTA--TCATGCATCGTTGAGCAGTCACTT--GAGT-GGA---CCCC
gi|14 : A-CGGAAACCCTCTCACAACAACTGAA------TTGAAGAAATGGGTTGAACACTTT--GGGAGATCTGCTA--------AACAGAC-CAAACAGCAGA-AACAT---CCACC--------GGATCAT--ACAGCCAGCTGATTTACAGATCGTCCGA--TCA-ACTGT-GCAAATCCAACAAA---AT-AGA------------GA
gi|15 : T-TATC---GAACAAGCAATA--TAAT-GGAATACCAGCTCATACATCTGATTCGT-AGATT--TGTAAAAGGCATTCGATAACG-TA----CATAGAAAAATA-T-TA--TGGAGATCAAA-GAAAACATTAC-AGAAGGTCACGAACCAC-TATGAAATATCT-GAAAAGt
gi|16 : AG-AC--------GGAGCTAATGAAGATG-AACACCACT--C--CATAT-A-----CCCAAGT-----CTCAATCGGTGGAGAACTCATGAGAG-GGTGGAGTCCTTCATT---TACCTGAGACGTATAGTTGACAAGCATGGAGGCA
gi|17 : TTAACATCCAATGGCCTGAA--AGGAACA-CAA-TGA-AGAACTATGAA-GCAGAGCAAATCAA-----GAA--CGA-----AT-------------------AAG--G-AGTGGGATT--GGATTGGACACACTTTG
gi|18 : CCTCTCTCTACACCAACTTCAT-CGTTTA-TT-AGAAAGCGTTCGATACAG-TG----CACTGAGAGACG-C-TGCACGG------AG-G------CTAC-GGAG
gi|19 : GTCAATCTATGCA--CTTT-CATA---GAACAGTCACTG--GAGT-GGAAGCCCCCCC
gi|2 : GGACA------TATGAA-AGATTATGTACGATG--TAATAAGAAGCTATCTGGAAAACGAATGTA-AAC-A--A-------GAAAAAACAGTCAAAGCAAAA---CAGAAG-------GTGACATCT-AAGA-TCGTTGTAG-GAAGG--AGAACA-TTTAAGA-AGA---------------AGCGAATTCGA-ATTTAGA-G-CATTTACCACCTAATCTTTGGAT-ATTAACCACCAGCAAGT--A-AGGCC---CGAAATTAGACTGCGGAGCA-CCAACCAA---AG-AGA------------GATTATA-------GTAATCTTATGAACA-GCT-AAAAATGGTAACGCTCAGCGGAGCTCTGATAAACT-CCATCAGAAGCACA--AGAGCAGA-TTTTTGACAGC-ACGGACTGGCATTCTCTACCCACTGTTTCAAGAGGAATAT-GAAGTAGCAGACT---A--TTCCTAAAGAATGGAAAG-GGGTACA-TAATCAAGCT-CCCCCAAAGAAC-----TCTA--GAACTGTTGTATAAACTATAGAG-AATAACACT---ATTAAATTGTTCCAGGGAAA-TATTCAACCGA-TGTTTAAC--TAAACA-GAATGAAAACAAGAAATGTGGATAAC---AAGCCACGTGACCAACAAGCAGGTTTTTCTTAAAAAGGA----GTATCAA-CGGACCACAAGGCTACGTACCCCGT-CAT----GAACAAT--GTGCTGAAT-GGAATTCCTCCCTATATGTAGGCTT-ATAAGATTACTG-AGAAAGATTTTGACAGTGTTGTGTTGACAGGGAGACGACATG--TGG------AACG------CTTCTTGGGG---------CATATATG
gi|2 : CGGAGTTAA-ACTAGAGATCGT-AAGGATGTCTACTGTCACCCTTTCTGTTCTTGCATTGG-CATTATAGGGAT-GGAA-ATTGAATTCTCCCAC-ACAATAGGATGAAGGAACA-C------CATGGGAC--CTCCGTTAACG-AGGTAAA--ACTTTG---CAGTTGTCGAC---ACTCTT-TTTCACATTACTCGGATCC----AAA-A--TGCCAGAGAAAATGGCCACTGG--TTGCAA--ACATCAGCA---ACAG---TTAGGATTAA----------------GAATAGA-ACGGACAGAAGGAA--GA-GAAGATTTAAGAGCAA-ATA--CA-TTCAGGATGCT--ACTTTGAACATAGAAAATGAAGAGA--ATTAAAGAAGTTGAAA---TTGTTACATACCTTTGGTGTATAGTGGATTGACAGGAGGGAACAGATCGAAGCGGAC-----------------GT-A-----------AAACACTTTAAGGCCAA-----------AGCAGACATA-CCTGCTTTACTTCAAAATATCT-----T-------GAA-ATTTAC-TGATACGCACCAGAGTAAGACTGTTCAACACCCAATGTAAGCAGCGCTCTTTGTTTATGAGTCAGAAAC-TGATG-ACAACTGTATTTTCTTAACACAGATC-----AGGATCCAGAC-ATTCATACGGATCGCCT-G-----AGACGAATTTCCAG-ATC-GATGGCTTGGACCAAAATCAACGAACACTAGGACTGTGGA-G-AGAGCAAACCAAATCCCGATTTCAA-----AG-------AGGAGATTCTTGAAGCCGAATGGGGGTTCAGGAAGGGCAACACTCTTCGCAAACCACATACACATACCAACATCGCT-A--G--CAAGCACTATCCTCGGAA-CCGCAGGG-AAGCGCAAGAA-GGGTTGGCCAAAGAGAAACACCT----GCGAGAGACCTGGAGG-------TCGGCACCTAAAAGAACacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattgacggagttaaactagagatcgtaaggatgtctactgtcaccctttctgttcttgcattggcattatagggatggaaattgaattctcccacacaataggatgaaggaacaccatgggacctccgttaacgaggtaaaactttgcagttgtcgacactctttttcacattactcggatccaaaatgccagagaaaatggccactggttgcaaacatcagcaacagttaggattaagaatagaacggacagaaggaagagaagatttaagagcaaatacattcaggatgctactttgaacatagaaaatgaagagaattaaagaagttgaaattgttacatacctttggtgtatagtggattgacaggagggaacagatcgaagcggacgtaaaacactttaaggccaaagcagacatacctgctttacttcaaaatatcttgaaatttactgatacgcaccagagtaagactgttcaacacccaatgtaagcagcgctctttgtttatgagtcagaaactgatgacaactgtattttcttaacacagatcaggatccagacattcatacggatcgcctgagacgaatttccagatcgatggcttggaccaaaatcaacgaacactaggactgtggagagagcaaaccaaatcccgatttcaaagaggagattcttgaagccgaatgggggttcaggaagggcaacactcttcgcaaaccacatacacataccaacatcgctagcaagcactatcctcggaaccgcagggaagcgcaagaagggttggccaaagagaaacacctgcgagagacctggaggtcggcacctaaaagaacaggg
gi|20 : ggacatatgaaagattatgtacgatgtaataagaagctatctggaaaacgaatgtaaacaagaaaaaacagtcaaagcaaaacagaaggtgacatctaagatcgttgtaggaaggagaacatttaagaagaagcgaattcgaatttagagcatttaccacctaatctttggatattaaccaccagcaagtaaggcccgaaattagactgcggagcaccaaccaaagagagattatagtaatcttatgaacagctaaaaatggtaacgctcagcggagctctgataaactccatcagaagcacaagagcagatttttgacagcacggactggcattctctacccactgtttcaagaggaatatgaagtagcagactattcctaaagaatggaaaggggtacataatcaagctcccccaaagaactctagaactgttgtataaactatagagaataacactattaaattgttccagggaaatattcaaccgatgtttaactaaacagaatgaaaacaagaaatgtggataacaagccacgtgaccaacaagcaggtttttcttaaaaaggagtatcaacggaccacaaggctacgtaccccgtcatgaacaatgtgctgaatggaattcctccctatatgtaggcttataagattactgagaaagattttgacagtgttgtgttgacagggagacgacatgtggaacgcttcttggggcatatatgacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattga-------GGAGAGCTATTACCACACTTAAGAATGaggg
gi|3 : --TGG------AA-G------ATAC-TGAGG---------CAC-CATGGAGTACCC-GAGAAGCTCG------TCTCTCTCATTCATAACACCTACCAAGGCATAACATGCAGAGTTGCCCATGCTGGCCAGATGTCGGAAAGTTTCGAGGTCAAGACAGGAGTTCAACAAGGATGCTTGCTGT
gi|3 : aagcaacaGGATGCTTGCTG---TTCATCACGACAGGT---AGGAGCAATGGAATACAGTGGACA-CTCC--TAACACAACTGGATGATCTCGACTTAGCCAATGACCTAGCTCTCCTCTCGCA-----AAACCAC----AGGCAGATGCAGGGCAA---GACAACTCGCCTTACAACGATAACAGCAGGAACAGATCTCAAGATCAAATT-------------GAAGAAA-AT--------GCAGAGGATGAAGATC-AACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTTGGTGGAGAGTCCATCAAAGAAGTGGATTCCTTCATT---TACCTGGTGAGTGTAGTGGACAGACAAGATGGCAAAAACCAA----GACATCATGACAAGTCAAGAAT-A-----------GGA------AAAGCAAG-----------AGAAG-TATT-C--ACCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTTGCATTAC---CACCATACGGTGAATCTTCAAC-TTCAATGTAAA-GTCCATCTTACTTTATGGAGTGGAGACATGGAGAACTAT-G---------AACACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-GTCCC-AGGTGCATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAAT-----------------------AATCA-----------------------------GG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTGT---GAA---------------CAACACCGCAAA--C--CAGGCCCTG-ACTTGGAACCCACAGGGCAAGAGAAAGAA-GGGATGTCCT---AGGAACACCCGGAGGCAAGATAC--GGA-G-------TTGG-AATTGAAAGAACATGACACCACCTGGCAAGAAACAGCAAAAGCAGCCCAGAACTGTGTTCGCTGGAGGACTGTCATTGATGGCCGATGTTCCTTACAGAACGACAtcatcacgacaggtaggagcaatggaatacagtggacactcctaacacaactggatgatctcgacttagccaatgacctagctctcctctcgcaaaaccacaggcagatgcagggcaagacaactcgccttacaacgataacagcaggaacagatctcaagatcaaattgaagaaaatgcagaggatgaagatcaacaccactgtccaatcaccagtcacagttggtggagagtccatcaaagaagtggattccttcatttacctggtgagtgtagtggacagacaagatggcaaaaaccaagacatcatgacaagtcaagaataggaaaagcaagagaagtattcaccatgctcaagaacatctgggcctcaaagaacatttgcattaccaccatacggtgaatcttcaacttcaatgtaaagtccatcttactttatggagtggagacatggagaactatgaacacagccctgcaaaagatccagacattttacaacacctgtcccaggtgcatccttaacatccgatggcctgaaaggatcacaaataatcaggtgaaggaagtggggttggattggacacactgtgaacaacaccgcaaaccaggccctgacttggaacccacagggcaagagaaagaagggatgtcctaggaacacccggaggcaagatacggagttggaattgaaagaacatgacaccacctggcaagaaacagcaaaagcagcccagaactgtgttcgctggaggactgtcattgatggccgatgttccttacagaacgaca
gi|4 : aagcaacatggaagatactgaggcaccatggagtacccgagaagctcgtctctctcattcataacacctaccaaggcataacatgcagagttgcccatgctggccagatgtcggaaagtttcgaggtcaagacaggagttcaacaaCCTTCTACATCAATTCCAT-AGGCTA-CT-AGAAGGCATTCGACAGTG-TA----GATAGAGAGACG-C-TG--TGG------AA-G------CTGC-TGAGA---------CAT-TACGGAGTTCCC-CAGAAGATCA------TCTCCCTCATCCGCTGCACCTTCCA-GGAATGAGTTGCAAGATCGCGCA-----GC----TGTCAGACAGTTTCGGGGTGAAGACTGGAGTACGTCAGGGTTGCATTCTGTCGCCATTCCTCTTCTTCC--TGGTCATT-----GATTGGAT-CTTGAAG---ACCACTACAACAGGC---AGGAAAAATGTTATACATTGGGGGGCTCT--GGACACAGTTGGATGACCTCGACTTTGCGGACGATCTGGCACTTCTGTCACA-----CAGCTACTCCCAGA----TGCAGGACAA---GACCACTCGCCTTGAAACAAAATCAGCAGAGACAGGGCTTAAAATCAGCA--------------GAAAAAATAC--------CGAACTGATGAAGATC-AACACTACTGCCAACA-A--A-----CC--AGT-----CACAGTCGGTGGAGAGCCTATCAGAGAGGTGGAGTCTTTTGTC---TACCTGGGAAGTGTGATCGACAAGCACGAGGGCACAGACCGA----GAC-----------------GTCACAGCAAGGATTGGC------AAGGCAAG-----------AGGGG-CTTC-C--GTAATGTTGAAGAACATCTGGGCCTCCAA---ACAGATCAGTAGGAA---GACGAAAATGCGCATCTTCAAT-TCCAACGTTAA-ATCCGTTCTTCTTTACGGATGTGAAACATGACGGACGAC-A---------AAGACAA---TG-------------C-ATTT-TTC--AACACCT-G-CCT-AAG
gi|5 : aGGAACGGGTCTCAAGATCAACATTNNNNNNNNNNNNNNNNNNN-NN--------NNNNNNNNNNNNNNNN-NNNNNNNNNNNN--NN-NNNN-----NN--NNN-----NNNNNNNNNNNNNNNGCCCATCAGATGAACCGAGTCCTTCGAT---TAT----GGAGTGTGGTGAACAGACANNNNNNNNNNNNNNNN----NNN-----------------NN-N-----------NNN------NNNNNNNNNNNNNNNNNNNAGCAG-TGTT-C--ACCATGCTCAAGAACATTTAGCCCTCCAA---GGACATCCACATGAC---CACC
gi|5 : aactGTAGAAGATCCAAAC-ATTT-CAC--ATCACCTAG-GCT-AAGCGCATCTTTAGCATCCAATGGCCTGAA--AAGAACA-CAAATGA-GGAACTGT------AAAGGAAATCAG-----GA---CAA-------------------------------GAACTGA----------TAGAC---CT-TACGGAAGCTAT---TA---TTCAGCATCAC--ATTC--CAGGTCCTG-ACTTGAAACCCGCGAGGTAAGAGAAAGCGCGGGAATTCC----AGAAACACATGGAAGCGAGATAT--GGA-GAAAACATTCAT-GATTGAAAGCATGTGTCGCCACCTGGAAAGGTGCACCTCGAGTAGCTCAGAACTGTATTTGTCGGAGGAC--TCGTGTATGACCTATGTTCCTTACGGAACGATATACCTAAGTAAGTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcgtagaagatccaaacatttcacatcacctaggctaagcgcatctttagcatccaatggcctgaaaagaacacaaatgaggaactgtaaaggaaatcaggacaagaactgatagaccttacggaagctattattcagcatcacattccaggtcctgacttgaaacccgcgaggtaagagaaagcgcgggaattccagaaacacatggaagcgagatatggagaaaacattcatgattgaaagcatgtgtcgccacctggaaaggtgcacctcgagtagctcagaactgtatttgtcggaggactcgtgtatgacctatgttccttacggaacgatatacctaagtaagta
gi|6 : aactggaacgggtctcaagatcaacattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcccatcagatgaaccgagtccttcgattatggagtgtggtgaacagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcagtgttcaccatgctcaagaacatttagccctccaaggacatccacatgaccaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcAACCCTCTTATAACAACAGAAGAACAATGGAAGAGATGGGCAGGATATTCT--GG-AGATCTAGTC--------AATAGAC-CAG-CGCCAGA-A-------------------------AT--ACAACCAGCCCAT--CCAAACCTCCCGA--ACA-ACTGTGACAAG-TCAACAAAGACAA-AGAAAAAAAACCAAAGAC-ACAAAGATGAGGAGAGCAATCATCACGCTCCAAAACGGAAAAGA--GGCAGGTC-CTGACGAGATACCCGAGGAAGCA-ATCAAAGCTGA-GTT--AACA--------------TCTTTCATA-ATCTCTTCAAGAAGA-TAT-GG-G--AGAGAGTGGAA-ATACCAGAGGGGCGGAAAGAGGAAACCCTG---------CC---AAAGAAGGGAAATCTGAGGGAC--T-GTGGCAACTACCGTGGAATCGTGCTCCTCTCA----GTTTCCGACAAAGTCCACAA
gi|7 : gcCTTAACAGTGGAAAAGGATGAAA----GAA--GCAAATGACCCAAAGCTCCGT---CAGCAAGCTGCTTTTAGGCGAAACAGATCATGTACTGATCAAATAGCCAGCCTACACA--TCAT-CATC---GAACAATCAATG--GAGA-GGAAGGTCCCTCTATATGTAAACTTCAT-AGATTA-TG-AGAAATCTTTCGATAGCG-TG----GATCGGGAGACA-C-TG--TGG------AA-G------GTAC-TGAGG---------CAC-TATGGAGTACCT-GAGAAGCTCGTCTCTCTCTCTCTCATTCGTAACACCTTCCAAGGCAAGACATGCAGGGTCGCCCTTGCT
gi|8 : gatcacaaattgccaccaacaaccaacaaaatcagagaaccacactAAATAAAAAAA---------AAAC--AGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACTTGTAAAGAAATCCTTGGCAGAATGAAGACTCAACA-------CAAGAAGTGGATCTCGTCTCATACCATGAGAAAACCGGATGTGAGGAAGGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCACCAAAGGTAAAGGCTCAATAG------GTC--------TTGAAGAGGAC-TATAC-A--GCCACAAA--------C----AAAGAAGT-TA-AGC-GAAA-TATTAGGAAAGACAAA-CGGGGAAAAAAATCAGAGA
gi|9 : aGGAACAACGATATAAACTG-ACA-CTCC--TGAGACAGTT--------------TAACCGATGACCTGGCTTTCCTCTAGCA-------------------------CAGGACAA---GACAATTCGTCTCGCAACACCATTAACTTGAACGt
gi|9 : AGTTGGTAGCGAGCCTATCAGAATAGTCGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGTGC-CATGTCAA----GA------------------AT-C-----------GCT------AAGGCAattagctaaaacgattcgcagtgagttggtagcgagcctatcagaatagtcgagtccttcgtttacctggggagtgtggtggacagacaggggtgccatgtcaagaatcgctaaggcatatatcacaa
Alignments
lowQualScore : 111111111111111111111111111111111111111111111
lowQualScore : 333333333 11 4444444444 3333333 4444444444444444 11 1 222222 4444444444444 1111 777777777777 111 2222 11 1 444444444 1 1111 5555555555555555555555 1 11 1111 11 1 1 111111 66666666666666666666666666 22222 1 11 11 5555555555555555555 1 1 1 11 333333 1111111111 222 4444 2222 1 111111 1 2222 11 111 11 1111 1111 11111111111111111 222222222 2222222 11 22222 1111 1111 11111 11 11 55555555555555555555555 111 5555555555555555 111111 1111111111 11111 111 1111 888888888888888888888888888888888888888888 33333333333 11 111 111 44444444444 11111111 11 11111 11 111 222222 222222222222222222222222222222222222222222222 11 11 33333333333 33333333 1 11 3333 11 1 3333333 1 1
lowQualScore : 777777777 77 0000000000 1 1 1 2222222 1 1 1 1 1 1 1 9999999999999999 44 1 3 000000 1 4444444444444 0 6666 222222222222 7 0 444 2 0 2 2 4444 3 1 33 6 33 0 3 22 000000000 0 0000 9999999999999999999999 0 33 44 7777 99 33 0 2 0 999999 77777777777777777777777777 0 0 2 7 88888 0 3 0 7 44 7 44 2222222222222222222 1 3 999 3 3 7 88 1 1 555555 1 0 7 6 8888888888 333 7777 7 6666 1 6 0 2 0 1111 1 1 2 0 2 1 777777 0 0 0 1111 33 2 2 2 1 22 11 555 0 7 2 11 4 5 3333 0 1 77 5 33 0 1 5 55 5 1 0 5 2222 7777 66 88888888888888888 5 222222222 5 5 5 0000000 3 6 0 1 3 1 33 0 6 1 11 9 55555 3 8 1 1 5555 6 0 8888 22222 1 11 11 1 88888888 666 1 3 1 88888888888888888888888 444 0 3 33 33 8888888888888888 0 6 0 1 6 999999 33 99 8888888888 99 66666 2 3 1 000 1 1 1 4444 666666666666666666666666666666666666666666 11111111111 00 6 6 99 1 1 1 3 111 2 2 111 9 3 0 8 1 8 1 1 333 0 3 6 3 11111111111 1 33333333 8 8 11 1 8 88888 1 11 1 8 0 111 1 888888 000000000000000000000000000000000000000000000 0 11 1 0 8 00 6 0 66666666666 88888888 6 0 2 0 6 11 4 1111 2 0 0 33 0 2222222 0 88 1 0 0 0 7 1 1 5
lowQualScore : ......... .. .......... . . . ....... . . . . . . . ................ .. . . ...... . ............. . .... ............ . . ... . . . . .... . . .. . .. . . .. ......... . .... ...................... . .. .. .... .. .. . . . ...... .......................... . . . . ..... . . . . .. . .. ................... . . ... . . . .. . . ...... . . . . .......... ... .... . .... . . . . . .... . . . . . . ...... . . . .... .. . . . . .. .. ... . . . .. . . .... . . .. . .. . . . .. . . . . .... .... .. ................. . ......... . . . ....... . . . . . . .. . . . .. . ..... . . . . .... . . .... ..... . .. .. . ........ ... . . . ....................... ... . . .. .. ................ . . . . . ...... .. .. .......... .. ..... . . . ... . . . .... .......................................... ........... .. . . .. . . . . ... . . ... . . . . . . . . ... . . . . ........... . ........ . . .. . . ..... . .. . . . ... . ...... ............................................. . .. . . . .. . . ........... ........ . . . . . .. . .... . . . .. . ....... . .. . . . . . . . .
lowQualScore : 555555555 55 0000000000 0 0 0 5555555 0 0 0 0 0 0 0 2222222222222222 00 0 3 333333 0 3333333333333 7 7777 000000000000 3 7 333 5 2 5 5 0000 2 0 22 5 88 0 2 88 888888888 0 8888 2222222222222222222222 0 88 55 2222 55 88 0 5 0 555555 11111111111111111111111111 8 2 5 0 33333 7 3 7 3 00 3 33 7777777777777777777 0 3 333 3 3 3 33 0 0 000000 0 7 3 7 0000000000 333 7777 3 0000 0 7 7 5 2 2222 0 0 5 2 0 0 000000 8 2 0 2222 88 0 5 5 0 22 22 888 8 0 5 00 6 7 0000 7 0 99 7 77 7 7 7 99 7 9 4 7 1111 7777 99 11111111111111111 0 999999999 7 7 2 2222222 2 3 6 0 7 0 55 3 4 0 00 8 00000 2 0 4 0 0000 5 2 5555 66666 0 88 00 4 22222222 222 0 2 0 66666666666666666666666 000 6 2 55 88 4444444444444444 4 7 8 0 7 222222 77 22 2222222222 22 77777 0 9 0 000 7 0 0 2222 000000000000000000000000000000000000000000 77777777777 00 7 7 22 0 0 0 0 777 5 2 777 0 8 6 0 4 0 4 4 000 8 2 4 2 44444444444 0 88888888 0 0 00 4 0 00000 0 00 4 0 8 888 4 000000 666666666666666666666666666666666666666666666 8 00 0 8 2 77 5 2 22222222222 55555555 5 0 5 2 5 22 2 2222 5 2 8 88 0 5555555 0 00 0 7 7 7 3 0 0 5
consensus : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGACA------TTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-TA-AGC-G--A-T-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT--GG-AGATCTGCTN--------AACAGAC-CAA-CGCCAGA-A-CAT---CCACC--------GGAT-AT--ACAGCCAGCCGAT--ACAGACCTCCCGA--TCA-ACTGTGGCAAA-CCAACAAA---AN-AGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGN-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGA-NTT--GACAGC-ACGGAC----ATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAG--GNAGANT---A-ATNCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCT-CC---AAAGAAGGGAGATCTGAGGAAC-GT-GTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGGTCATT-----GATTGGAT-CTTGANG---ACCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCA-----CAGCCAC----AGACA--TGCAGGACAA---GACAACTCGCCTTGCAACAACATCAGCAGGAACGGGTCTTAAGATCAACNT-------------GAAGAAA-ACGGAACTGA-TGAAGA------TCAACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTCGGTGGAGAGCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-G-CCT-AGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTGTGGA-G-AGAGCAAATCAA-----GAA--CAA-----AT-------AGG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC---CA---ACCAACACCGC--A--C--CAGGCCCTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC----AGGAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
Reference ( family-19 ) : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGACA------TTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-TA-AGC-G--A-T-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT--GG-AGATCTGCTN--------AACAGAC-CAA-CGCCAGA-A-CAT---CCACC--------GGAT-AT--ACAGCCAGCCGAT--ACAGACCTCCCGA--TCA-ACTGTGGCAAA-CCAACAAA---AN-AGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGN-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGA-NTT--GACAGC-ACGGAC----ATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAG--GNAGANT---A-ATNCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCT-CC---AAAGAAGGGAGATCTGAGGAAC-GT-GTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGGTCATT-----GATTGGAT-CTTGANG---ACCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCA-----CAGCCAC----AGACA--TGCAGGACAA---GACAACTCGCCTTGCAACAACATCAGCAGGAACGGGTCTTAAGATCAACNT-------------GAAGAAA-ACGGAACTGA-TGAAGA------TCAACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTCGGTGGAGAGCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-G-CCT-AGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTGTGGA-G-AGAGCAAATCAA-----GAA--CAA-----AT-------AGG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC---CA---ACCAACACCGC--A--C--CAGGCCCTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC----AGGAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
gi|1 : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGC-------G--AGACACGTGTGAAGAATTCCTCGGCAGAAGGAAGACTCAACATTCAACACAAGGAGTGGATCTCGACTGATACCATTAGAAAATTGGATGAGAGGAATGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCAGCAAAGGCAAAGGCTCAAAAGCAGCGGGACAAGGAAATTTGA-GAGAGC-TGTAC-ATGGTCACCAAGAAGCTCTC----AAACAAGT-TCCAGCAG--ACT-----GAAAAACCAGTGAAGGAAAAGAA-CGGAAACCCTCTCACAACAACTGAAGATCAATTGAAGAGAAGGGTAGAACACTTT--AG-AGATCTGCTTTACTGCTTAACAGAC-CAA-CACTAGACA-C-T---CCACC--------GGAT-AT--ACAGCCAGCTGAT--ATAGATCTCCCAA--TCA-ACCGTGACAAA-CCAACAAA---ATCAGA------------GAC--CA-------GGAGAGCTATTACCACACTTAAGAATGGAAAA-T-CACCAAGGC-CTGCTGAAATACCAGCGGAAGC-CATCAAAGCTGACATTGAGACAGCTATAGAC----ATCCTGTATA-ACCTCTTCAA---GA-TCTCGGAG--GAAGAAT---ACATCTCTGAAGAGTGGAAAGAGGGTATCCTCATTAAGCTGCC---AAAGAAGGGAGATTTGAGGAAC-A--GCAACAACTATCGAGGAATAATGCTCCTGTCA----GTGCCCGGCAAAGTCCTCAAAAGAATTCTT--C--TCGAGA-GGATTAAA----GAA--GCAGAGGACCCAAAGCTCCGTGACCAGCAGTCTGGTTTAAGGCGAAACAGAAAATGTGCCGATCAAACAGCCAGCCTACGCA--TTAT-CATC---GAACAATCACTG--GAGT-GGAAGTCCCCTCTATATGTCAACTTTAT-AGACGA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGATA-C-TG--TGG------AA-G------ATAC-TGAGG---------CAC-TATGGAATATCT-GAGAAGTTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGTCAGATGCCGGAAAGTTTCGAGGTCAAGACAGGAGTTCGACAAGGATGCTTGCTGTCACCATTTCTGTTCCTCC--TGGTCATT-----GATTGGAT-CATGACG---ACCATCACGAGGGGA---AGGAACAATTGCATACAGTGGACA-CTCC--TGACACAACTGTATGATATCGACTTCGCCGATGACCTGGCTCTCTTGTCGCA-----CAACCAC----AGACA--TGCATGACAA---GACAACTCGCCTTGCAACAACATCAGCAGCAACGGGTCTTAAGATCAACTT-------------GAAGAAA-ACGGAACTGA-TGAAGA------TCAACGCCACTGTC--CA-ATCA-----CC--AGT-----CACAGTTGGTGGAGATTCCATCAAAAAAGTTGATTCCTTCATT---TACCTGAGGAGTGTAGTGGACAGACAGGGTGGTACAGACCAA----GAC------------------T-A-----------TGA------AAAGCAAG-----------AGTAG-CATT-C--ACCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATTAC---CACCAAACTGCGAATCTTCAAC-TCCAACGTAAA-ATCCATCTTACTCTATGGAACAGAGACATGGAGAACTGC-T---------AAAACAGCCCTGCAAAAGATCCAGACAATTT-TAC--AACA-CT-G-TCTCAGGTGAATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTATAGAGG-AGAGCAAATCAA-----GAA--CAATGGACATGCAAATCAGG-------TGGAG--GAAGTGGGGTT--GGATTGGACACACTCTGAGGAAGCCAC---CA---ACCAACCCCAC--A--CGACAGG-CCTG-ACTTGGAACCCTCAGGGCAAGAGAAAGAT-AGGACGTCC----TAGAACACCTGGAGGCGAGACAC--GGA-G-------TCAG-AATTGAAAGAGCA-GGAACCACCTGGCAAGAAGCAGCAAAAACAGCCTAGAACCGTGTTCGCTAGAGGACTGTCGTTGATGTTGTGTGTTCCTTACGGAACGACAGGCCTAAGT-AGTA
gi|10 : T-TATT---GAACAATGAACC--GAATAGGAAGTCCTTCCTATATGTAAGCTTTAT-TGATTG-TG-ATAAAGTTTTTGATGGTG-TT----GACAGGG---------G--T------------------CTTC-TGGGA---------TAT-TATGGAGTACCCTGATAAA---------------CTTATTCTTAAGAAC-ACT------TGGCATACAGGTTCATACTTGGAGGACAACTGACGCAAGCATTTGAAGTTAAAACTAGAGTTTGTAACGGATATCTACTATCAC----CCTGTT-TTGC--T
gi|11 : -A-----------GGC------AAGGCAAG-----------AG-GG-CATTTC--GTAATGTTGAAGAACATTTGGGCCTCAAAACAGATCAGTTGAAAGAC---AAACA---TGCGCATCCTTAAT-TTCAACGTTAA-ATCAGTCCTTCTTTACGGATGCGAAGCATGGCGGACGAC-A---------AAGACAATGCTG
gi|12 : gctgagacgtcacagcaaggattgacaAGTAACC-GAGAAACTCT------TCTCCCTGTTCCGCAGCACCTACCAAAGCATGACATGCAGGGTCGCCTACCCTGGCCAGATGTACGAGAGTTTCGAGGTAAAAACAGAAAATCGACGAGAATGTTTGCTGTCGTCGTTCCTCTTCCTTA--TGGACTTC-----GACTGAAC-CATGAGG---ACCAtt
gi|13 : gtCTCCTGTCA----GTGCCGGGCAAGGTTCTCAACAGAGTCCT--GC--TAGAGA-GGATGAAG----GAG--GCAGTTGACCCAAAGCTCCGAGACCAGTAGGCGGGCTTCTGCAGTAACATATCTTGTCCTGACCAGATCGCCAGCCTACGTA--TCATGCATCGTTGAGCAGTCACTT--GAGT-GGA---CCCC
gi|14 : A-CGGAAACCCTCTCACAACAACTGAA------TTGAAGAAATGGGTTGAACACTTT--GGGAGATCTGCTA--------AACAGAC-CAAACAGCAGA-AACAT---CCACC--------GGATCAT--ACAGCCAGCTGATTTACAGATCGTCCGA--TCA-ACTGT-GCAAATCCAACAAA---AT-AGA------------GA
gi|15 : T-TATC---GAACAAGCAATA--TAAT-GGAATACCAGCTCATACATCTGATTCGT-AGATT--TGTAAAAGGCATTCGATAACG-TA----CATAGAAAAATA-T-TA--TGGAGATCAAA-GAAAACATTAC-AGAAGGTCACGAACCAC-TATGAAATATCT-GAAAAGt
gi|16 : AG-ACGGAGCTAA-TGAAGA------TGAACACCACT--C--CATAT-A-----CCCAAGT-----CTCAATCGGTGGAGAACTCATGAGAG-GGTGGAGTCCTTCATT---TACCTGAGACGTATAGTTGACAAGCATGGAGGCA
gi|17 : TTAACATCCAATGGCCTGAA--AGGAACA-CAA-TGA-AGAACTATGAA-GCAGAGCAAATCAA-----GAA--CGA-----AT-------------------AAG--G-AGTGGGATT--GGATTGGACACACTTTG
gi|18 : CCTCTCTCTACACCAACTTCAT-CGTTTA-TT-AGAAAGCGTTCGATACAG-TG----CACTGAGAGACG-C-TGCACGG------AG-G------CTAC-GGAG
gi|19 : GTCAATCTATGCA--CTTT-CATA---GAACAGTCACTG--GAGT-GGAAGCCCCCCC
gi|2 : GGACA------TATGAA-AGATTATGTACGATG--TAATAAGAAGCTATCTGGAAAACGAATGTA-AAC-A--A-------GAAAAAACAGTCAAAGCAAAA---CAGAAG-------GTGACATCT-AAGA-TCGTTGTAG-GAAGG--AGAACA-TTTAAGA-AGA---------------AGCGAATTCGA-ATTTAGA-G-CATTTACCACCTAATCTTTGGAT-ATTAACCACCAGCAAGT--A-AGGCC---CGAAATTAGACTGCGGAGCA-CCAACCAA---AG-AGA------------GATTATA-------GTAATCTTATGAACA-GCT-AAAAATGGTAACGCTCAGCGGAGCTCTGATAAACT-CCATCAGAAGCACA--AGAGCAGA-TTTTTGACAGC-ACGGACTGGCATTCTCTACCCACTGTTTCAAGAGGAATAT-GAAGTAGCAGACT---A--TTCCTAAAGAATGGAAAG-GGGTACA-TAATCAAGCT-CCCCCAAAGAAC-----TCTA--GAACTGTTGTATAAACTATAGAG-AATAACACT---ATTAAATTGTTCCAGGGAAA-TATTCAACCGA-TGTTTAAC--TAAACA-GAATGAAAACAAGAAATGTGGATAAC---AAGCCACGTGACCAACAAGCAGGTTTTTCTTAAAAAGGA----GTATCAA-CGGACCACAAGGCTACGTACCCCGT-CAT----GAACAAT--GTGCTGAAT-GGAATTCCTCCCTATATGTAGGCTT-ATAAGATTACTG-AGAAAGATTTTGACAGTGTTGTGTTGACAGGGAGACGACATG--TGG------AACG------CTTCTTGGGG---------CATATATG
gi|2 : CGGAGTTAA-ACTAGAGATCGT-AAGGATGTCTACTGTCACCCTTTCTGTTCTTGCATTGG-CATTATAGGGAT-GGAA-ATTGAATTCTCCCAC-ACAATAGGATGAAGGAACA-C------CATGGGAC--CTCCGTTAACG-AGGTAAA--ACTTTG---CAGTTGTCGAC---ACTCTT-TTTCACATTACTCGGATCC----AAA-A--TGCCAGAGAAAATGGCCACTGG--TTGCAA--ACATCAGCA---ACAG---TTAGGATTAA----------------GAATAGA-ACGG-ACAGAAGGAAGAGAAGATTTAAGAGCAA-ATA--CA-TTCAGGATGCT--ACTTTGAACATAGAAAATGAAGAGA--ATTAAAGAAGTTGAAA---TTGTTACATACCTTTGGTGTATAGTGGATTGACAGGAGGGAACAGATCGAAGCGGAC-----------------GT-A-----------AAACACTTTAAGGCCAA-----------AGCAGACATA-CCTGCTTTACTTCAAAATATCT-----T-------GAA-ATTTAC-TGATACGCACCAGAGTAAGACTGTTCAACACCCAATGTAAGCAGCGCTCTTTGTTTATGAGTCAGAAAC-TGATG-ACAACTGTATTTTCTTAACACAGATC-----AGGATCCAGAC-ATTCATACGGATCGCCT-G-----AGACGAATTTCCAG-ATC-GATGGCTTGGACCAAAATCAACGAACACTAGGACTGTGGA-G-AGAGCAAACCAAATCCCGATTTCAA-----AG-------AGGAGATTCTTGAAGCCGAATGGGGGTTCAGGAAGGGCAACACTCTTCGCAAACCACATACACATACCAACATCGCT-A--G--CAAGCACTATCCTCGGAA-CCGCAGGG-AAGCGCAAGAA-GGGTTGGCCAAAGAGAAACACCT----GCGAGAGACCTGGAGG-------TCGGCACCTAAAAGAACacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattgacggagttaaactagagatcgtaaggatgtctactgtcaccctttctgttcttgcattggcattatagggatggaaattgaattctcccacacaataggatgaaggaacaccatgggacctccgttaacgaggtaaaactttgcagttgtcgacactctttttcacattactcggatccaaaatgccagagaaaatggccactggttgcaaacatcagcaacagttaggattaagaatagaacggacagaaggaagagaagatttaagagcaaatacattcaggatgctactttgaacatagaaaatgaagagaattaaagaagttgaaattgttacatacctttggtgtatagtggattgacaggagggaacagatcgaagcggacgtaaaacactttaaggccaaagcagacatacctgctttacttcaaaatatcttgaaatttactgatacgcaccagagtaagactgttcaacacccaatgtaagcagcgctctttgtttatgagtcagaaactgatgacaactgtattttcttaacacagatcaggatccagacattcatacggatcgcctgagacgaatttccagatcgatggcttggaccaaaatcaacgaacactaggactgtggagagagcaaaccaaatcccgatttcaaagaggagattcttgaagccgaatgggggttcaggaagggcaacactcttcgcaaaccacatacacataccaacatcgctagcaagcactatcctcggaaccgcagggaagcgcaagaagggttggccaaagagaaacacctgcgagagacctggaggtcggcacctaaaagaacaggg
gi|20 : ggacatatgaaagattatgtacgatgtaataagaagctatctggaaaacgaatgtaaacaagaaaaaacagtcaaagcaaaacagaaggtgacatctaagatcgttgtaggaaggagaacatttaagaagaagcgaattcgaatttagagcatttaccacctaatctttggatattaaccaccagcaagtaaggcccgaaattagactgcggagcaccaaccaaagagagattatagtaatcttatgaacagctaaaaatggtaacgctcagcggagctctgataaactccatcagaagcacaagagcagatttttgacagcacggactggcattctctacccactgtttcaagaggaatatgaagtagcagactattcctaaagaatggaaaggggtacataatcaagctcccccaaagaactctagaactgttgtataaactatagagaataacactattaaattgttccagggaaatattcaaccgatgtttaactaaacagaatgaaaacaagaaatgtggataacaagccacgtgaccaacaagcaggtttttcttaaaaaggagtatcaacggaccacaaggctacgtaccccgtcatgaacaatgtgctgaatggaattcctccctatatgtaggcttataagattactgagaaagattttgacagtgttgtgttgacagggagacgacatgtggaacgcttcttggggcatatatgacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattga-------GGAGAGCTATTACCACACTTAAGAATGaggg
gi|3 : --TGG------AA-G------ATAC-TGAGG---------CAC-CATGGAGTACCC-GAGAAGCTCG------TCTCTCTCATTCATAACACCTACCAAGGCATAACATGCAGAGTTGCCCATGCTGGCCAGATGTCGGAAAGTTTCGAGGTCAAGACAGGAGTTCAACAAGGATGCTTGCTGT
gi|3 : aagcaacaGGATGCTTGCTG---TTCATCACGACAGGT---AGGAGCAATGGAATACAGTGGACA-CTCC--TAACACAACTGGATGATCTCGACTTAGCCAATGACCTAGCTCTCCTCTCGCA-----AAACCAC----AGGCAGATGCAGGGCAA---GACAACTCGCCTTACAACGATAACAGCAGGAACAGATCTCAAGATCAAATT-------------GAAGAAA-ATGCAGAGGA-TGAAGA------TCAACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTTGGTGGAGAGTCCATCAAAGAAGTGGATTCCTTCATT---TACCTGGTGAGTGTAGTGGACAGACAAGATGGCAAAAACCAA----GACATCATGACAAGTCAAGAAT-A-----------GGA------AAAGCAAG-----------AGAAG-TATT-C--ACCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTTGCATTAC---CACCATACGGTGAATCTTCAAC-TTCAATGTAAA-GTCCATCTTACTTTATGGAGTGGAGACATGGAGAACTAT-G---------AACACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-GTCCC-AGGTGCATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAAT-----------------------AATCA-----------------------------GG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTGT---GAA---------------CAACACCGCAAA--C--CAGGCCCTG-ACTTGGAACCCACAGGGCAAGAGAAAGAA-GGGATGTCCT---AGGAACACCCGGAGGCAAGATAC--GGA-G-------TTGG-AATTGAAAGAACATGACACCACCTGGCAAGAAACAGCAAAAGCAGCCCAGAACTGTGTTCGCTGGAGGACTGTCATTGATGGCCGATGTTCCTTACAGAACGACAtcatcacgacaggtaggagcaatggaatacagtggacactcctaacacaactggatgatctcgacttagccaatgacctagctctcctctcgcaaaaccacaggcagatgcagggcaagacaactcgccttacaacgataacagcaggaacagatctcaagatcaaattgaagaaaatgcagaggatgaagatcaacaccactgtccaatcaccagtcacagttggtggagagtccatcaaagaagtggattccttcatttacctggtgagtgtagtggacagacaagatggcaaaaaccaagacatcatgacaagtcaagaataggaaaagcaagagaagtattcaccatgctcaagaacatctgggcctcaaagaacatttgcattaccaccatacggtgaatcttcaacttcaatgtaaagtccatcttactttatggagtggagacatggagaactatgaacacagccctgcaaaagatccagacattttacaacacctgtcccaggtgcatccttaacatccgatggcctgaaaggatcacaaataatcaggtgaaggaagtggggttggattggacacactgtgaacaacaccgcaaaccaggccctgacttggaacccacagggcaagagaaagaagggatgtcctaggaacacccggaggcaagatacggagttggaattgaaagaacatgacaccacctggcaagaaacagcaaaagcagcccagaactgtgttcgctggaggactgtcattgatggccgatgttccttacagaacgaca
gi|4 : aagcaacatggaagatactgaggcaccatggagtacccgagaagctcgtctctctcattcataacacctaccaaggcataacatgcagagttgcccatgctggccagatgtcggaaagtttcgaggtcaagacaggagttcaacaaCCTTCTACATCAATTCCAT-AGGCTA-CT-AGAAGGCATTCGACAGTG-TA----GATAGAGAGACG-C-TG--TGG------AA-G------CTGC-TGAGA---------CAT-TACGGAGTTCCC-CAGAAGATCA------TCTCCCTCATCCGCTGCACCTTCCA-GGAATGAGTTGCAAGATCGCGCA-----GC----TGTCAGACAGTTTCGGGGTGAAGACTGGAGTACGTCAGGGTTGCATTCTGTCGCCATTCCTCTTCTTCC--TGGTCATT-----GATTGGAT-CTTGAAG---ACCACTACAACAGGC---AGGAAAAATGTTATACATTGGGGGGCTCT--GGACACAGTTGGATGACCTCGACTTTGCGGACGATCTGGCACTTCTGTCACA-----CAGCTACTCCCAGA----TGCAGGACAA---GACCACTCGCCTTGAAACAAAATCAGCAGAGACAGGGCTTAAAATCAGCA--------------GAAAAAATACCGAACTGA-TGAAGA------TCAACACTACTGCCAACA-A--A-----CC--AGT-----CACAGTCGGTGGAGAGCCTATCAGAGAGGTGGAGTCTTTTGTC---TACCTGGGAAGTGTGATCGACAAGCACGAGGGCACAGACCGA----GAC-----------------GTCACAGCAAGGATTGGC------AAGGCAAG-----------AGGGG-CTTC-C--GTAATGTTGAAGAACATCTGGGCCTCCAA---ACAGATCAGTAGGAA---GACGAAAATGCGCATCTTCAAT-TCCAACGTTAA-ATCCGTTCTTCTTTACGGATGTGAAACATGACGGACGAC-A---------AAGACAA---TG-------------C-ATTT-TTC--AACACCT-G-CCT-AAG
gi|5 : aGGAACGGGTCTCAAGATCAACATTNNNNNNNNNNNNNNNNNNN-NNNNNNNNNN-NNNNNN------NNNNNNNNNNNNNN--NN-NNNN-----NN--NNN-----NNNNNNNNNNNNNNNGCCCATCAGATGAACCGAGTCCTTCGAT---TAT----GGAGTGTGGTGAACAGACANNNNNNNNNNNNNNNN----NNN-----------------NN-N-----------NNN------NNNNNNNNNNNNNNNNNNNAGCAG-TGTT-C--ACCATGCTCAAGAACATTTAGCCCTCCAA---GGACATCCACATGAC---CACC
gi|5 : aactGTAGAAGATCCAAAC-ATTT-CAC--ATCACCTAG-GCT-AAGCGCATCTTTAGCATCCAATGGCCTGAA--AAGAACA-CAAATGA-GGAACTGT------AAAGGAAATCAG-----GA---CAA-------------------------------GAACTGA----------TAGAC---CT-TACGGAAGCTAT---TA---TTCAGCATCAC--ATTC--CAGGTCCTG-ACTTGAAACCCGCGAGGTAAGAGAAAGCGCGGGAATTCC----AGAAACACATGGAAGCGAGATAT--GGA-GAAAACATTCAT-GATTGAAAGCATGTGTCGCCACCTGGAAAGGTGCACCTCGAGTAGCTCAGAACTGTATTTGTCGGAGGAC--TCGTGTATGACCTATGTTCCTTACGGAACGATATACCTAAGTAAGTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcgtagaagatccaaacatttcacatcacctaggctaagcgcatctttagcatccaatggcctgaaaagaacacaaatgaggaactgtaaaggaaatcaggacaagaactgatagaccttacggaagctattattcagcatcacattccaggtcctgacttgaaacccgcgaggtaagagaaagcgcgggaattccagaaacacatggaagcgagatatggagaaaacattcatgattgaaagcatgtgtcgccacctggaaaggtgcacctcgagtagctcagaactgtatttgtcggaggactcgtgtatgacctatgttccttacggaacgatatacctaagtaagta
gi|6 : aactggaacgggtctcaagatcaacattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcccatcagatgaaccgagtccttcgattatggagtgtggtgaacagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcagtgttcaccatgctcaagaacatttagccctccaaggacatccacatgaccaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcAACCCTCTTATAACAACAGAAGAACAATGGAAGAGATGGGCAGGATATTCT--GG-AGATCTAGTC--------AATAGAC-CAG-CGCCAGA-A-------------------------AT--ACAACCAGCCCAT--CCAAACCTCCCGA--ACA-ACTGTGACAAG-TCAACAAAGACAA-AGAAAAAAAACCAAAGAC-ACAAAGATGAGGAGAGCAATCATCACGCTCCAAAACGGAAAAGA--GGCAGGTC-CTGACGAGATACCCGAGGAAGCA-ATCAAAGCTGA-GTT--AACA--------------TCTTTCATA-ATCTCTTCAAGAAGA-TAT-GG-G--AGAGAGTGGAA-ATACCAGAGGGGCGGAAAGAGGAAACCCTG---------CC---AAAGAAGGGAAATCTGAGGGAC--T-GTGGCAACTACCGTGGAATCGTGCTCCTCTCA----GTTTCCGACAAAGTCCACAA
gi|7 : gcCTTAACAGTGGAAAAGGATGAAA----GAA--GCAAATGACCCAAAGCTCCGT---CAGCAAGCTGCTTTTAGGCGAAACAGATCATGTACTGATCAAATAGCCAGCCTACACA--TCAT-CATC---GAACAATCAATG--GAGA-GGAAGGTCCCTCTATATGTAAACTTCAT-AGATTA-TG-AGAAATCTTTCGATAGCG-TG----GATCGGGAGACA-C-TG--TGG------AA-G------GTAC-TGAGG---------CAC-TATGGAGTACCT-GAGAAGCTCGTCTCTCTCTCTCTCATTCGTAACACCTTCCAAGGCAAGACATGCAGGGTCGCCCTTGCT
gi|8 : gatcacaaattgccaccaacaaccaacaaaatcagagaaccacactAAATAAAAAAA---------AAAC--AGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACTTGTAAAGAAATCCTTGGCAGAATGAAGACTCAACA-------CAAGAAGTGGATCTCGTCTCATACCATGAGAAAACCGGATGTGAGGAAGGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCACCAAAGGTAAAGGCTCAATAG------GTC--------TTGAAGAGGAC-TATAC-A--GCCACAAA--------C----AAAGAAGT-TA-AGC-GAAA-TATTAGGAAAGACAAA-CGGGGAAAAAAATCAGAGA
gi|9 : aGGAACAACGATATAAACTG-ACA-CTCC--TGAGACAGTT--------------TAACCGATGACCTGGCTTTCCTCTAGCA-------------------------CAGGACAA---GACAATTCGTCTCGCAACACCATTAACTTGAACGt
gi|9 : AGTTGGTAGCGAGCCTATCAGAATAGTCGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGTGC-CATGTCAA----GA------------------AT-C-----------GCT------AAGGCAattagctaaaacgattcgcagtgagttggtagcgagcctatcagaatagtcgagtccttcgtttacctggggagtgtggtggacagacaggggtgccatgtcaagaatcgctaaggcatatatcacaa
Alignments
lowQualScore : 111111111111111111111111111111111111111111111
lowQualScore : 333333333 11 4444444444 3333333 4444444444444444 11 1 222222 4444444444444 1111 777777777777 111 2222 11 1 444444444 1 1111 5555555555555555555555 1 11 1111 11 1 1 111111 66666666666666666666666666 22222 1 11 11 5555555555555555555 1 1 1 11 333333 1111111111 222 4444 2222 1 111111 1 2222 11 111 11 1111 1111 11111111111111111 222222222 2222222 11 22222 1111 1111 11111 11 11 55555555555555555555555 111 5555555555555555 111111 1111111111 11111 111 1111 888888888888888888888888888888888888888888 33333333333 11 111 111 44444444444 11111111 11 11111 11 111 222222 222222222222222222222222222222222222222222222 11 11 33333333333 33333333 1 11 3333 11 1 3333333 1 1
lowQualScore : 777777777 77 0000000000 1 1 1 2222222 1 1 1 1 1 1 1 9999999999999999 44 1 3 000000 1 4444444444444 0 6666 222222222222 7 0 444 2 0 2 2 4444 3 1 33 6 33 0 3 22 000000000 0 0000 9999999999999999999999 0 33 44 7777 99 33 0 2 0 999999 77777777777777777777777777 0 0 2 7 88888 0 3 0 7 44 7 44 2222222222222222222 1 3 999 3 3 7 88 1 1 555555 1 0 7 6 8888888888 333 7777 7 6666 1 6 0 2 0 1111 1 1 2 0 2 1 777777 0 0 0 1111 33 2 2 2 1 22 11 555 0 7 2 11 4 5 3333 0 1 77 5 33 0 1 5 55 5 1 0 5 2222 7777 66 88888888888888888 5 222222222 5 5 5 0000000 3 6 0 1 3 1 33 0 6 1 11 9 55555 3 8 1 1 5555 6 0 8888 22222 1 11 11 1 88888888 666 1 3 1 88888888888888888888888 444 0 3 33 33 8888888888888888 0 6 0 1 6 999999 33 99 8888888888 99 66666 2 3 1 000 1 1 1 4444 666666666666666666666666666666666666666666 11111111111 00 6 6 99 1 1 1 3 111 2 2 111 9 3 0 8 1 8 1 1 333 0 3 6 3 11111111111 1 33333333 8 8 11 1 8 88888 1 11 1 8 0 111 1 888888 000000000000000000000000000000000000000000000 0 11 1 0 8 00 6 0 66666666666 88888888 6 0 2 0 6 11 4 1111 2 0 0 33 0 2222222 0 88 1 0 0 0 7 1 1 5
lowQualScore : ......... .. .......... . . . ....... . . . . . . . ................ .. . . ...... . ............. . .... ............ . . ... . . . . .... . . .. . .. . . .. ......... . .... ...................... . .. .. .... .. .. . . . ...... .......................... . . . . ..... . . . . .. . .. ................... . . ... . . . .. . . ...... . . . . .......... ... .... . .... . . . . . .... . . . . . . ...... . . . .... .. . . . . .. .. ... . . . .. . . .... . . .. . .. . . . .. . . . . .... .... .. ................. . ......... . . . ....... . . . . . . .. . . . .. . ..... . . . . .... . . .... ..... . .. .. . ........ ... . . . ....................... ... . . .. .. ................ . . . . . ...... .. .. .......... .. ..... . . . ... . . . .... .......................................... ........... .. . . .. . . . . ... . . ... . . . . . . . . ... . . . . ........... . ........ . . .. . . ..... . .. . . . ... . ...... ............................................. . .. . . . .. . . ........... ........ . . . . . .. . .... . . . .. . ....... . .. . . . . . . . .
lowQualScore : 555555555 55 0000000000 0 0 0 5555555 0 0 0 0 0 0 0 2222222222222222 00 0 3 333333 0 3333333333333 7 7777 000000000000 3 7 333 5 2 5 5 0000 2 0 22 5 88 0 2 88 888888888 0 8888 2222222222222222222222 0 88 55 2222 55 88 0 5 0 555555 11111111111111111111111111 8 2 5 0 33333 7 3 7 3 00 3 33 7777777777777777777 0 3 333 3 3 3 33 0 0 000000 0 7 3 7 0000000000 333 7777 3 0000 0 7 7 5 2 2222 0 0 5 2 0 0 000000 8 2 0 2222 88 0 5 5 0 22 22 888 8 0 5 00 6 7 0000 7 0 99 7 77 7 7 7 99 7 9 4 7 1111 7777 99 11111111111111111 0 999999999 7 7 2 2222222 2 3 6 0 7 0 55 3 4 0 00 8 00000 2 0 4 0 0000 5 2 5555 66666 0 88 00 4 22222222 222 0 2 0 66666666666666666666666 000 6 2 55 88 4444444444444444 4 7 8 0 7 222222 77 22 2222222222 22 77777 0 9 0 000 7 0 0 2222 000000000000000000000000000000000000000000 77777777777 00 7 7 22 0 0 0 0 777 5 2 777 0 8 6 0 4 0 4 4 000 8 2 4 2 44444444444 0 88888888 0 0 00 4 0 00000 0 00 4 0 8 888 4 000000 666666666666666666666666666666666666666666666 8 00 0 8 2 77 5 2 22222222222 55555555 5 0 5 2 5 22 2 2222 5 2 8 88 0 5555555 0 00 0 7 7 7 3 0 0 5
consensus : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGACA------TTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-TA-AGC-G--A-T-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT--GG-AGATCTGCTN--------AACAGAC-CAA-CGCCAGA-A-CAT---CCACC--------GGAT-AT--ACAGCCAGCCGAT--ACAGACCTCCCGA--TCA-ACTGTGGCAAA-CCAACAAA---AN-AGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGN-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGA-NTT--GACAGC-ACGGAC----ATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAG--GNAGANT---A-ATNCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCT-CC---AAAGAAGGGAGATCTGAGGAAC-GT-GTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGGTCATT-----GATTGGAT-CTTGANG---ACCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCA-----CAGCCAC----AGACA--TGCAGGACAA---GACAACTCGCCTTGCAACAACATCAGCAGGAACGGGTCTTAAGATCAACNT-------------GAAGAAA-ACGGAACTGA-TGAAGA------TCAACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTCGGTGGAGAGCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-G-CCT-AGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTGTGGA-G-AGAGCAAATCAA-----GAA--CAA-----AT-------AGG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC---CA---ACCAACACCGC--A--C--CAGGCCCTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC----AGGAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
Reference ( family-19 ) : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGACA------TTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-TA-AGC-G--A-T-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT--GG-AGATCTGCTN--------AACAGAC-CAA-CGCCAGA-A-CAT---CCACC--------GGAT-AT--ACAGCCAGCCGAT--ACAGACCTCCCGA--TCA-ACTGTGGCAAA-CCAACAAA---AN-AGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGN-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGA-NTT--GACAGC-ACGGAC----ATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAG--GNAGANT---A-ATNCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCT-CC---AAAGAAGGGAGATCTGAGGAAC-GT-GTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGGTCATT-----GATTGGAT-CTTGANG---ACCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCA-----CAGCCAC----AGACA--TGCAGGACAA---GACAACTCGCCTTGCAACAACATCAGCAGGAACGGGTCTTAAGATCAACNT-------------GAAGAAA-ACGGAACTGA-TGAAGA------TCAACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTCGGTGGAGAGCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-G-CCT-AGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTGTGGA-G-AGAGCAAATCAA-----GAA--CAA-----AT-------AGG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC---CA---ACCAACACCGC--A--C--CAGGCCCTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC----AGGAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
gi|1 : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGC-------G--AGACACGTGTGAAGAATTCCTCGGCAGAAGGAAGACTCAACATTCAACACAAGGAGTGGATCTCGACTGATACCATTAGAAAATTGGATGAGAGGAATGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCAGCAAAGGCAAAGGCTCAAAAGCAGCGGGACAAGGAAATTTGA-GAGAGC-TGTAC-ATGGTCACCAAGAAGCTCTC----AAACAAGT-TCCAGCAG--ACT-----GAAAAACCAGTGAAGGAAAAGAA-CGGAAACCCTCTCACAACAACTGAAGATCAATTGAAGAGAAGGGTAGAACACTTT--AG-AGATCTGCTTTACTGCTTAACAGAC-CAA-CACTAGACA-C-T---CCACC--------GGAT-AT--ACAGCCAGCTGAT--ATAGATCTCCCAA--TCA-ACCGTGACAAA-CCAACAAA---ATCAGA------------GAC--CA-------GGAGAGCTATTACCACACTTAAGAATGGAAAA-T-CACCAAGGC-CTGCTGAAATACCAGCGGAAGC-CATCAAAGCTGACATTGAGACAGCTATAGAC----ATCCTGTATA-ACCTCTTCAA---GA-TCTCGGAG--GAAGAAT---ACATCTCTGAAGAGTGGAAAGAGGGTATCCTCATTAAGCTGCC---AAAGAAGGGAGATTTGAGGAAC-A--GCAACAACTATCGAGGAATAATGCTCCTGTCA----GTGCCCGGCAAAGTCCTCAAAAGAATTCTT--C--TCGAGA-GGATTAAA----GAA--GCAGAGGACCCAAAGCTCCGTGACCAGCAGTCTGGTTTAAGGCGAAACAGAAAATGTGCCGATCAAACAGCCAGCCTACGCA--TTAT-CATC---GAACAATCACTG--GAGT-GGAAGTCCCCTCTATATGTCAACTTTAT-AGACGA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGATA-C-TG--TGG------AA-G------ATAC-TGAGG---------CAC-TATGGAATATCT-GAGAAGTTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGTCAGATGCCGGAAAGTTTCGAGGTCAAGACAGGAGTTCGACAAGGATGCTTGCTGTCACCATTTCTGTTCCTCC--TGGTCATT-----GATTGGAT-CATGACG---ACCATCACGAGGGGA---AGGAACAATTGCATACAGTGGACA-CTCC--TGACACAACTGTATGATATCGACTTCGCCGATGACCTGGCTCTCTTGTCGCA-----CAACCAC----AGACA--TGCATGACAA---GACAACTCGCCTTGCAACAACATCAGCAGCAACGGGTCTTAAGATCAACTT-------------GAAGAAA-ACGGAACTGA-TGAAGA------TCAACGCCACTGTC--CA-ATCA-----CC--AGT-----CACAGTTGGTGGAGATTCCATCAAAAAAGTTGATTCCTTCATT---TACCTGAGGAGTGTAGTGGACAGACAGGGTGGTACAGACCAA----GAC------------------T-A-----------TGA------AAAGCAAG-----------AGTAG-CATT-C--ACCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATTAC---CACCAAACTGCGAATCTTCAAC-TCCAACGTAAA-ATCCATCTTACTCTATGGAACAGAGACATGGAGAACTGC-T---------AAAACAGCCCTGCAAAAGATCCAGACAATTT-TAC--AACA-CT-G-TCTCAGGTGAATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTATAGAGG-AGAGCAAATCAA-----GAA--CAATGGACATGCAAATCAGG-------TGGAG--GAAGTGGGGTT--GGATTGGACACACTCTGAGGAAGCCAC---CA---ACCAACCCCAC--A--CGACAGG-CCTG-ACTTGGAACCCTCAGGGCAAGAGAAAGAT-AGGACGTCC----TAGAACACCTGGAGGCGAGACAC--GGA-G-------TCAG-AATTGAAAGAGCA-GGAACCACCTGGCAAGAAGCAGCAAAAACAGCCTAGAACCGTGTTCGCTAGAGGACTGTCGTTGATGTTGTGTGTTCCTTACGGAACGACAGGCCTAAGT-AGTA
gi|10 : T-TATT---GAACAATGAACC--GAATAGGAAGTCCTTCCTATATGTAAGCTTTAT-TGATTG-TG-ATAAAGTTTTTGATGGTG-TT----GACAGGG---------G--T------------------CTTC-TGGGA---------TAT-TATGGAGTACCCTGATAAA---------------CTTATTCTTAAGAAC-ACT------TGGCATACAGGTTCATACTTGGAGGACAACTGACGCAAGCATTTGAAGTTAAAACTAGAGTTTGTAACGGATATCTACTATCAC----CCTGTT-TTGC--T
gi|11 : -A-----------GGC------AAGGCAAG-----------AG-GG-CATTTC--GTAATGTTGAAGAACATTTGGGCCTCAAAACAGATCAGTTGAAAGAC---AAACA---TGCGCATCCTTAAT-TTCAACGTTAA-ATCAGTCCTTCTTTACGGATGCGAAGCATGGCGGACGAC-A---------AAGACAATGCTG
gi|12 : gctgagacgtcacagcaaggattgacaAGTAACC-GAGAAACTCT------TCTCCCTGTTCCGCAGCACCTACCAAAGCATGACATGCAGGGTCGCCTACCCTGGCCAGATGTACGAGAGTTTCGAGGTAAAAACAGAAAATCGACGAGAATGTTTGCTGTCGTCGTTCCTCTTCCTTA--TGGACTTC-----GACTGAAC-CATGAGG---ACCAtt
gi|13 : gtCTCCTGTCA----GTGCCGGGCAAGGTTCTCAACAGAGTCCT--GC--TAGAGA-GGATGAAG----GAG--GCAGTTGACCCAAAGCTCCGAGACCAGTAGGCGGGCTTCTGCAGTAACATATCTTGTCCTGACCAGATCGCCAGCCTACGTA--TCATGCATCGTTGAGCAGTCACTT--GAGT-GGA---CCCC
gi|14 : A-CGGAAACCCTCTCACAACAACTGAA------TTGAAGAAATGGGTTGAACACTTT--GGGAGATCTGCTA--------AACAGAC-CAAACAGCAGA-AACAT---CCACC--------GGATCAT--ACAGCCAGCTGATTTACAGATCGTCCGA--TCA-ACTGT-GCAAATCCAACAAA---AT-AGA------------GA
gi|15 : T-TATC---GAACAAGCAATA--TAAT-GGAATACCAGCTCATACATCTGATTCGT-AGATT--TGTAAAAGGCATTCGATAACG-TA----CATAGAAAAATA-T-TA--TGGAGATCAAA-GAAAACATTAC-AGAAGGTCACGAACCAC-TATGAAATATCT-GAAAAGt
gi|16 : AG-ACGGAGCTAA-TGAAGA------TGAACACCACT--C--CATAT-A-----CCCAAGT-----CTCAATCGGTGGAGAACTCATGAGAG-GGTGGAGTCCTTCATT---TACCTGAGACGTATAGTTGACAAGCATGGAGGCA
gi|17 : TTAACATCCAATGGCCTGAA--AGGAACA-CAA-TGA-AGAACTATGAA-GCAGAGCAAATCAA-----GAA--CGA-----AT-------------------AAG--G-AGTGGGATT--GGATTGGACACACTTTG
gi|18 : CCTCTCTCTACACCAACTTCAT-CGTTTA-TT-AGAAAGCGTTCGATACAG-TG----CACTGAGAGACG-C-TGCACGG------AG-G------CTAC-GGAG
gi|19 : GTCAATCTATGCA--CTTT-CATA---GAACAGTCACTG--GAGT-GGAAGCCCCCCC
gi|2 : GGACA------TATGAA-AGATTATGTACGATG--TAATAAGAAGCTATCTGGAAAACGAATGTA-AAC-A--A-------GAAAAAACAGTCAAAGCAAAA---CAGAAG-------GTGACATCT-AAGA-TCGTTGTAG-GAAGG--AGAACA-TTTAAGA-AGA---------------AGCGAATTCGA-ATTTAGA-G-CATTTACCACCTAATCTTTGGAT-ATTAACCACCAGCAAGT--A-AGGCC---CGAAATTAGACTGCGGAGCA-CCAACCAA---AG-AGA------------GATTATA-------GTAATCTTATGAACA-GCT-AAAAATGGTAACGCTCAGCGGAGCTCTGATAAACT-CCATCAGAAGCACA--AGAGCAGA-TTTTTGACAGC-ACGGACTGGCATTCTCTACCCACTGTTTCAAGAGGAATAT-GAAGTAGCAGACT---A--TTCCTAAAGAATGGAAAG-GGGTACA-TAATCAAGCT-CCCCCAAAGAAC-----TCTA--GAACTGTTGTATAAACTATAGAG-AATAACACT---ATTAAATTGTTCCAGGGAAA-TATTCAACCGA-TGTTTAAC--TAAACA-GAATGAAAACAAGAAATGTGGATAAC---AAGCCACGTGACCAACAAGCAGGTTTTTCTTAAAAAGGA----GTATCAA-CGGACCACAAGGCTACGTACCCCGT-CAT----GAACAAT--GTGCTGAAT-GGAATTCCTCCCTATATGTAGGCTT-ATAAGATTACTG-AGAAAGATTTTGACAGTGTTGTGTTGACAGGGAGACGACATG--TGG------AACG------CTTCTTGGGG---------CATATATG
gi|2 : CGGAGTTAA-ACTAGAGATCGT-AAGGATGTCTACTGTCACCCTTTCTGTTCTTGCATTGG-CATTATAGGGAT-GGAA-ATTGAATTCTCCCAC-ACAATAGGATGAAGGAACA-C------CATGGGAC--CTCCGTTAACG-AGGTAAA--ACTTTG---CAGTTGTCGAC---ACTCTT-TTTCACATTACTCGGATCC----AAA-A--TGCCAGAGAAAATGGCCACTGG--TTGCAA--ACATCAGCA---ACAG---TTAGGATTAA----------------GAATAGA-ACGG-ACAGAAGGAAGAGAAGATTTAAGAGCAA-ATA--CA-TTCAGGATGCT--ACTTTGAACATAGAAAATGAAGAGA--ATTAAAGAAGTTGAAA---TTGTTACATACCTTTGGTGTATAGTGGATTGACAGGAGGGAACAGATCGAAGCGGAC-----------------GT-A-----------AAACACTTTAAGGCCAA-----------AGCAGACATA-CCTGCTTTACTTCAAAATATCT-----T-------GAA-ATTTAC-TGATACGCACCAGAGTAAGACTGTTCAACACCCAATGTAAGCAGCGCTCTTTGTTTATGAGTCAGAAAC-TGATG-ACAACTGTATTTTCTTAACACAGATC-----AGGATCCAGAC-ATTCATACGGATCGCCT-G-----AGACGAATTTCCAG-ATC-GATGGCTTGGACCAAAATCAACGAACACTAGGACTGTGGA-G-AGAGCAAACCAAATCCCGATTTCAA-----AG-------AGGAGATTCTTGAAGCCGAATGGGGGTTCAGGAAGGGCAACACTCTTCGCAAACCACATACACATACCAACATCGCT-A--G--CAAGCACTATCCTCGGAA-CCGCAGGG-AAGCGCAAGAA-GGGTTGGCCAAAGAGAAACACCT----GCGAGAGACCTGGAGG-------TCGGCACCTAAAAGAACacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattgacggagttaaactagagatcgtaaggatgtctactgtcaccctttctgttcttgcattggcattatagggatggaaattgaattctcccacacaataggatgaaggaacaccatgggacctccgttaacgaggtaaaactttgcagttgtcgacactctttttcacattactcggatccaaaatgccagagaaaatggccactggttgcaaacatcagcaacagttaggattaagaatagaacggacagaaggaagagaagatttaagagcaaatacattcaggatgctactttgaacatagaaaatgaagagaattaaagaagttgaaattgttacatacctttggtgtatagtggattgacaggagggaacagatcgaagcggacgtaaaacactttaaggccaaagcagacatacctgctttacttcaaaatatcttgaaatttactgatacgcaccagagtaagactgttcaacacccaatgtaagcagcgctctttgtttatgagtcagaaactgatgacaactgtattttcttaacacagatcaggatccagacattcatacggatcgcctgagacgaatttccagatcgatggcttggaccaaaatcaacgaacactaggactgtggagagagcaaaccaaatcccgatttcaaagaggagattcttgaagccgaatgggggttcaggaagggcaacactcttcgcaaaccacatacacataccaacatcgctagcaagcactatcctcggaaccgcagggaagcgcaagaagggttggccaaagagaaacacctgcgagagacctggaggtcggcacctaaaagaacaggg
gi|20 : ggacatatgaaagattatgtacgatgtaataagaagctatctggaaaacgaatgtaaacaagaaaaaacagtcaaagcaaaacagaaggtgacatctaagatcgttgtaggaaggagaacatttaagaagaagcgaattcgaatttagagcatttaccacctaatctttggatattaaccaccagcaagtaaggcccgaaattagactgcggagcaccaaccaaagagagattatagtaatcttatgaacagctaaaaatggtaacgctcagcggagctctgataaactccatcagaagcacaagagcagatttttgacagcacggactggcattctctacccactgtttcaagaggaatatgaagtagcagactattcctaaagaatggaaaggggtacataatcaagctcccccaaagaactctagaactgttgtataaactatagagaataacactattaaattgttccagggaaatattcaaccgatgtttaactaaacagaatgaaaacaagaaatgtggataacaagccacgtgaccaacaagcaggtttttcttaaaaaggagtatcaacggaccacaaggctacgtaccccgtcatgaacaatgtgctgaatggaattcctccctatatgtaggcttataagattactgagaaagattttgacagtgttgtgttgacagggagacgacatgtggaacgcttcttggggcatatatgacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattga-------GGAGAGCTATTACCACACTTAAGAATGaggg
gi|3 : --TGG------AA-G------ATAC-TGAGG---------CAC-CATGGAGTACCC-GAGAAGCTCG------TCTCTCTCATTCATAACACCTACCAAGGCATAACATGCAGAGTTGCCCATGCTGGCCAGATGTCGGAAAGTTTCGAGGTCAAGACAGGAGTTCAACAAGGATGCTTGCTGT
gi|3 : aagcaacaGGATGCTTGCTG---TTCATCACGACAGGT---AGGAGCAATGGAATACAGTGGACA-CTCC--TAACACAACTGGATGATCTCGACTTAGCCAATGACCTAGCTCTCCTCTCGCA-----AAACCAC----AGGCAGATGCAGGGCAA---GACAACTCGCCTTACAACGATAACAGCAGGAACAGATCTCAAGATCAAATT-------------GAAGAAA-ATGCAGAGGA-TGAAGA------TCAACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTTGGTGGAGAGTCCATCAAAGAAGTGGATTCCTTCATT---TACCTGGTGAGTGTAGTGGACAGACAAGATGGCAAAAACCAA----GACATCATGACAAGTCAAGAAT-A-----------GGA------AAAGCAAG-----------AGAAG-TATT-C--ACCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTTGCATTAC---CACCATACGGTGAATCTTCAAC-TTCAATGTAAA-GTCCATCTTACTTTATGGAGTGGAGACATGGAGAACTAT-G---------AACACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-GTCCC-AGGTGCATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAAT-----------------------AATCA-----------------------------GG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTGT---GAA---------------CAACACCGCAAA--C--CAGGCCCTG-ACTTGGAACCCACAGGGCAAGAGAAAGAA-GGGATGTCCT---AGGAACACCCGGAGGCAAGATAC--GGA-G-------TTGG-AATTGAAAGAACATGACACCACCTGGCAAGAAACAGCAAAAGCAGCCCAGAACTGTGTTCGCTGGAGGACTGTCATTGATGGCCGATGTTCCTTACAGAACGACAtcatcacgacaggtaggagcaatggaatacagtggacactcctaacacaactggatgatctcgacttagccaatgacctagctctcctctcgcaaaaccacaggcagatgcagggcaagacaactcgccttacaacgataacagcaggaacagatctcaagatcaaattgaagaaaatgcagaggatgaagatcaacaccactgtccaatcaccagtcacagttggtggagagtccatcaaagaagtggattccttcatttacctggtgagtgtagtggacagacaagatggcaaaaaccaagacatcatgacaagtcaagaataggaaaagcaagagaagtattcaccatgctcaagaacatctgggcctcaaagaacatttgcattaccaccatacggtgaatcttcaacttcaatgtaaagtccatcttactttatggagtggagacatggagaactatgaacacagccctgcaaaagatccagacattttacaacacctgtcccaggtgcatccttaacatccgatggcctgaaaggatcacaaataatcaggtgaaggaagtggggttggattggacacactgtgaacaacaccgcaaaccaggccctgacttggaacccacagggcaagagaaagaagggatgtcctaggaacacccggaggcaagatacggagttggaattgaaagaacatgacaccacctggcaagaaacagcaaaagcagcccagaactgtgttcgctggaggactgtcattgatggccgatgttccttacagaacgaca
gi|4 : aagcaacatggaagatactgaggcaccatggagtacccgagaagctcgtctctctcattcataacacctaccaaggcataacatgcagagttgcccatgctggccagatgtcggaaagtttcgaggtcaagacaggagttcaacaaCCTTCTACATCAATTCCAT-AGGCTA-CT-AGAAGGCATTCGACAGTG-TA----GATAGAGAGACG-C-TG--TGG------AA-G------CTGC-TGAGA---------CAT-TACGGAGTTCCC-CAGAAGATCA------TCTCCCTCATCCGCTGCACCTTCCA-GGAATGAGTTGCAAGATCGCGCA-----GC----TGTCAGACAGTTTCGGGGTGAAGACTGGAGTACGTCAGGGTTGCATTCTGTCGCCATTCCTCTTCTTCC--TGGTCATT-----GATTGGAT-CTTGAAG---ACCACTACAACAGGC---AGGAAAAATGTTATACATTGGGGGGCTCT--GGACACAGTTGGATGACCTCGACTTTGCGGACGATCTGGCACTTCTGTCACA-----CAGCTACTCCCAGA----TGCAGGACAA---GACCACTCGCCTTGAAACAAAATCAGCAGAGACAGGGCTTAAAATCAGCA--------------GAAAAAATACCGAACTGA-TGAAGA------TCAACACTACTGCCAACA-A--A-----CC--AGT-----CACAGTCGGTGGAGAGCCTATCAGAGAGGTGGAGTCTTTTGTC---TACCTGGGAAGTGTGATCGACAAGCACGAGGGCACAGACCGA----GAC-----------------GTCACAGCAAGGATTGGC------AAGGCAAG-----------AGGGG-CTTC-C--GTAATGTTGAAGAACATCTGGGCCTCCAA---ACAGATCAGTAGGAA---GACGAAAATGCGCATCTTCAAT-TCCAACGTTAA-ATCCGTTCTTCTTTACGGATGTGAAACATGACGGACGAC-A---------AAGACAA---TG-------------C-ATTT-TTC--AACACCT-G-CCT-AAG
gi|5 : aGGAACGGGTCTCAAGATCAACATTNNNNNNNNNNNNNNNNNNN-NNNNNNNNNN-NNNNNN------NNNNNNNNNNNNNN--NN-NNNN-----NN--NNN-----NNNNNNNNNNNNNNNGCCCATCAGATGAACCGAGTCCTTCGAT---TAT----GGAGTGTGGTGAACAGACANNNNNNNNNNNNNNNN----NNN-----------------NN-N-----------NNN------NNNNNNNNNNNNNNNNNNNAGCAG-TGTT-C--ACCATGCTCAAGAACATTTAGCCCTCCAA---GGACATCCACATGAC---CACC
gi|5 : aactGTAGAAGATCCAAAC-ATTT-CAC--ATCACCTAG-GCT-AAGCGCATCTTTAGCATCCAATGGCCTGAA--AAGAACA-CAAATGA-GGAACTGT------AAAGGAAATCAG-----GA---CAA-------------------------------GAACTGA----------TAGAC---CT-TACGGAAGCTAT---TA---TTCAGCATCAC--ATTC--CAGGTCCTG-ACTTGAAACCCGCGAGGTAAGAGAAAGCGCGGGAATTCC----AGAAACACATGGAAGCGAGATAT--GGA-GAAAACATTCAT-GATTGAAAGCATGTGTCGCCACCTGGAAAGGTGCACCTCGAGTAGCTCAGAACTGTATTTGTCGGAGGAC--TCGTGTATGACCTATGTTCCTTACGGAACGATATACCTAAGTAAGTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcgtagaagatccaaacatttcacatcacctaggctaagcgcatctttagcatccaatggcctgaaaagaacacaaatgaggaactgtaaaggaaatcaggacaagaactgatagaccttacggaagctattattcagcatcacattccaggtcctgacttgaaacccgcgaggtaagagaaagcgcgggaattccagaaacacatggaagcgagatatggagaaaacattcatgattgaaagcatgtgtcgccacctggaaaggtgcacctcgagtagctcagaactgtatttgtcggaggactcgtgtatgacctatgttccttacggaacgatatacctaagtaagta
gi|6 : aactggaacgggtctcaagatcaacattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcccatcagatgaaccgagtccttcgattatggagtgtggtgaacagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcagtgttcaccatgctcaagaacatttagccctccaaggacatccacatgaccaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcAACCCTCTTATAACAACAGAAGAACAATGGAAGAGATGGGCAGGATATTCT--GG-AGATCTAGTC--------AATAGAC-CAG-CGCCAGA-A-------------------------AT--ACAACCAGCCCAT--CCAAACCTCCCGA--ACA-ACTGTGACAAG-TCAACAAAGACAA-AGAAAAAAAACCAAAGAC-ACAAAGATGAGGAGAGCAATCATCACGCTCCAAAACGGAAAAGA--GGCAGGTC-CTGACGAGATACCCGAGGAAGCA-ATCAAAGCTGA-GTT--AACA--------------TCTTTCATA-ATCTCTTCAAGAAGA-TAT-GG-G--AGAGAGTGGAA-ATACCAGAGGGGCGGAAAGAGGAAACCCTG---------CC---AAAGAAGGGAAATCTGAGGGAC--T-GTGGCAACTACCGTGGAATCGTGCTCCTCTCA----GTTTCCGACAAAGTCCACAA
gi|7 : gcCTTAACAGTGGAAAAGGATGAAA----GAA--GCAAATGACCCAAAGCTCCGT---CAGCAAGCTGCTTTTAGGCGAAACAGATCATGTACTGATCAAATAGCCAGCCTACACA--TCAT-CATC---GAACAATCAATG--GAGA-GGAAGGTCCCTCTATATGTAAACTTCAT-AGATTA-TG-AGAAATCTTTCGATAGCG-TG----GATCGGGAGACA-C-TG--TGG------AA-G------GTAC-TGAGG---------CAC-TATGGAGTACCT-GAGAAGCTCGTCTCTCTCTCTCTCATTCGTAACACCTTCCAAGGCAAGACATGCAGGGTCGCCCTTGCT
gi|8 : gatcacaaattgccaccaacaaccaacaaaatcagagaaccacactAAATAAAAAAA---------AAAC--AGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACTTGTAAAGAAATCCTTGGCAGAATGAAGACTCAACA-------CAAGAAGTGGATCTCGTCTCATACCATGAGAAAACCGGATGTGAGGAAGGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCACCAAAGGTAAAGGCTCAATAG------GTC--------TTGAAGAGGAC-TATAC-A--GCCACAAA--------C----AAAGAAGT-TA-AGC-GAAA-TATTAGGAAAGACAAA-CGGGGAAAAAAATCAGAGA
gi|9 : aGGAACAACGATATAAACTG-ACA-CTCC--TGAGACAGTT--------------TAACCGATGACCTGGCTTTCCTCTAGCA-------------------------CAGGACAA---GACAATTCGTCTCGCAACACCATTAACTTGAACGt
gi|9 : AGTTGGTAGCGAGCCTATCAGAATAGTCGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGTGC-CATGTCAA----GA------------------AT-C-----------GCT------AAGGCAattagctaaaacgattcgcagtgagttggtagcgagcctatcagaatagtcgagtccttcgtttacctggggagtgtggtggacagacaggggtgccatgtcaagaatcgctaaggcatatatcacaa
blockSeqs : . . TACATGGGCT T A T . T C G T G C T GTC AG T A GATG T GAAGCTATCTGGA GTA GAAATATTAG T AAT C G G ACAA A T GT C AA G T GC A T ACAG GCATTTACCACCTAATCTTT C TA TG TTAC GT AA G G T GACAA AAAAAAACCAAAGACACAAAGATGA C T GCTCA T A AC T T TTGACAGCACGGACTGGC C C GAG A . A TA C C GGAAA T A C AATCAAGCT CCC GGAA A TGTT T G C AATT G G G G C TAACAG A ACAA AT A C G G CT CA TCT C C CC A G CGTT A CT A GT T A AC T T T TGTT GACA CA AGATCAAAGAAAACAT T GTCACGAAC A T C GTCTCTC A T T A T TA G G AT A ATAGG T G A G TCTC C ATGA ATGGA T GG GT G GGATGATC ACT A C T TTACTCGGATCCAAAA AAT C GG AT CATTNNNNNNNNNNNN T T A GAAGAT TG AA TTCAGGATG CA TTGAA C A G ACA A T A AGCG CATCATGACAAGTCAAGAATAGGA NNNNNNNNNNN CA A T CT A G G A ACA C T ACG G G A T C G T TGC C G G TGTATTTTCTT G CCCTGCAA . A GG T A TCCC A CC A A ACT A GAAGC AATCCCGATTTCAAAGAGGAGATTCTTGAAGCC CA T T TC A CATACACATAC AAAC C T C C GC T AAAG G CT G AAAACAT C AT A T G T A
blockSeqs : A A . AGC A C TA AA . . C G G TCG A A GC T . . T AG C . ATT AACATCCACC . . AA CC TC . . G . AT GATTATA C C GAG . . A . G AACA T . GAA . . . . G G A A . . G . . . T G . C . T A G . G TAAC . . . G C G A TT TT TCA T C . T . T C . . TA C . G . A . . AT . AACGC . . . . C T A C A A A AC C T . T . T . T A A T T ATGTT G A . C GGATGACC ACT A C C AAACCACAGGCAGA . C GA GG ATT . A . . TG . TATA . . A A T . T G G . CGTCACAGCAAGGATTGGC . AA . . . T T G A . C T . T C . A . C T TCA T A A A C ATC . . . A . CCT C . T . GA G GGAG AGAACGAATAAG . A C AC G TTATT ATTC C . C T A T T G . . . . GT T . A
blockSeqs : . . . . . T . . . . . . . . CGC A . . CC A . . . . . AG . . . . T C . GC . . . A . . T TA GC . . A . G . C A . . GC C . A . G . . GC . AGGC . . . . A G A T T G T AC A G . . . . . T T T . C ACGAT T A . T AAAACT . T C G CAGCTACTCCCAGA . T GG GT CA . G . . NN . ATCA . . T A G . G A T . CGTAAAACACTTT . GG . . . C C G C . G T . A A . A . A A GTG A G T G C TG . . . A . GCT C . T . GA G . GGTGAAG . T G . . . TAG T . . . A A . . . . . .
blockSeqs : . A . A C . . TT C . A . T . . GC . AAGA . . . . C A . T C G A TC . C . . T A A C C . . T . . A . C . . . TG . . . T . . T . NNNN . . C G G . G C G . NNNNNNN . CA . . . A G A C . C A . . . . T . G T TGT C . G A G . . . T . . . A . . . . GGACAA . . .
blockSeqs : . C G . . GG C . A . A . . AC . AAGC . . . . . . . . G . T T . . N . . A . AA . . N T C . G N N . ATCGCT . G . . . C C . . . . C .
blockSeqs : . . A . . . . . . . T . . . . AAGG . . . . T . C . . G G
blockSeqs : . C .
blockSeqCons : CACCAGA**************** ATT************* CC*** ****** GGAGCGAAG************************************
originalCons : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGACA------TTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-TA-AGC-G--A-T-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT--GG-AGATCTGCTN--------AACAGAC-CAA-CGCCAGA-A-CAT---CCACC--------GGAT-AT--ACAGCCAGCCGAT--ACAGACCTCCCGA--TCA-ACTGTGGCAAA-CCAACAAA---AN-AGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGN-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGA-NTT--GACAGC-ACGGAC----ATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAG--GNAGANT---A-ATNCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCT-CC---AAAGAAGGGAGATCTGAGGAAC-GT-GTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGGTCATT-----GATTGGAT-CTTGANG---ACCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCA-----CAGCCAC----AGACA--TGCAGGACAA---GACAACTCGCCTTGCAACAACATCAGCAGGAACGGGTCTTAAGATCAACNT-------------GAAGAAA-ACGGAACTGA-TGAAGA------TCAACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTCGGTGGAGAGCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-G-CCT-AGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTGTGGA-G-AGAGCAAATCAA-----GAA--CAA-----AT-------AGG-------TGAAG--GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC---CA---ACCAACACCGC--A--C--CAGGCCCTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC----AGGAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
finalCons : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGACA------TTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-TA-AGC-G--A-T-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT--GG-AGATCTGCTN--------AACAGAC-CAA-CGCCAGA-A-CAT---CCACC--------GGAT-AT--ACAGCCAGCCGAT--ACAGACCTCCCGA--TCA-ACTGTGGCAAA-CCAACAAA---AN-AGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGN-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGA-NTT--GACAGC-ACGGAC----ATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAG--GNAGANT---A-ATNCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCT-CC---AAAGAAGGGAGATCTGAGGAAC-GT-GTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGGTCATT-----GATTGGAT-CTTGANG---ACCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCACACCAGA----------------TGCAGGACAA---GACAACTCGCCTTGCAACAACATCAGCAGGAACGGGTCTTAAGATCAAATT-------------GAAGAAA-ACGGAACTGA-TGAAGA------TCAACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTCGGTGGAGAGCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT-GCC---AGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACTGT------AGAGCAAATCAGGAGCGAAG------------------------------------GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC---CA---ACCAACACCGC--A--C--CAGGCCCTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC----AGGAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 333333333 11 4444444444 3333333 4444444444444444 11 1 222222 4444444444444 1111 777777777777 111 2222 11 1 444444444 1 1111 5555555555555555555555 1 11 1111 11 1 1 111111 66666666666666666666666666 22222 1 11 11 5555555555555555555 1 1 1 11 333333 1111111111 222 4444 2222 1 111111 1 2222 11 111 11 1111 1111 11111111111111111 222222222 2222222 11 22222 1111 1111 11111 11 11 777777777777777777 11 111 22222 22 11 1111111111 11111 222222222222 111 1111 888888888888888888888888888888888888888888 33333333333 11 111 111 44444444444 11111111 11 222222 11 111 3333333333333333333333333333333333333333333333333333333333333333333333333333333333 11 11 33333333333 33333333 1 11 3333 11 1 3333333 1 1
lowQualScore : 777777777 77 0000000000 1 1 1 2222222 1 1 1 1 1 1 1 9999999999999999 44 1 3 000000 1 4444444444444 0 6666 222222222222 7 0 444 2 0 2 2 4444 3 1 33 6 33 0 3 22 000000000 0 0000 9999999999999999999999 0 33 44 7777 99 33 0 2 0 999999 77777777777777777777777777 0 0 2 7 88888 0 3 0 7 44 7 44 2222222222222222222 1 3 999 3 3 7 88 1 1 555555 1 0 7 6 8888888888 333 7777 7 6666 1 6 0 2 0 1111 1 1 2 0 2 1 777777 0 0 0 1111 33 2 2 2 1 22 11 555 0 7 2 11 4 5 3333 0 1 77 5 33 0 1 5 55 5 1 0 5 2222 7777 66 88888888888888888 5 222222222 5 5 5 0000000 3 6 0 1 3 1 33 0 6 1 11 9 55555 3 8 1 1 5555 6 0 8888 22222 1 11 11 1 88888888 666 1 3 1 666666666666666666 11 444 8 3 00000 33 33 77 11 11 6 6 55 0 6 33 99 8888888888 99 66666 2 999999999999 3 1 000 1 1 1 4444 666666666666666666666666666666666666666666 11111111111 00 6 6 99 1 1 1 3 111 2 2 111 9 3 0 8 1 8 1 1 333 0 3 6 3 11111111111 1 33333333 8 8 11 1 666666 1 11 1 8 3 111 5555555555555555555555555555555555555555555555555555555555555555555555555555555555 11 1 0 8 00 6 0 66666666666 88888888 6 0 2 0 6 11 4 1111 2 0 0 33 0 2222222 0 88 1 0 0 0 7 1 1 5
lowQualScore : ......... .. .......... . . . ....... . . . . . . . ................ .. . . ...... . ............. . .... ............ . . ... . . . . .... . . .. . .. . . .. ......... . .... ...................... . .. .. .... .. .. . . . ...... .......................... . . . . ..... . . . . .. . .. ................... . . ... . . . .. . . ...... . . . . .......... ... .... . .... . . . . . .... . . . . . . ...... . . . .... .. . . . . .. .. ... . . . .. . . .... . . .. . .. . . . .. . . . . .... .... .. ................. . ......... . . . ....... . . . . . . .. . . . .. . ..... . . . . .... . . .... ..... . .. .. . ........ ... . . . .................. .. ... . . ..... .. .. .. .. .. . . .. . . .. .. .......... .. ..... . ............ . . ... . . . .... .......................................... ........... .. . . .. . . . . ... . . ... . . . . . . . . ... . . . . ........... . ........ . . .. . ...... . .. . . . ... .................................................................................. .. . . . .. . . ........... ........ . . . . . .. . .... . . . .. . ....... . .. . . . . . . . .
lowQualScore : 555555555 55 0000000000 0 0 0 5555555 0 0 0 0 0 0 0 2222222222222222 00 0 3 333333 0 3333333333333 7 7777 000000000000 3 7 333 5 2 5 5 0000 2 0 22 5 88 0 2 88 888888888 0 8888 2222222222222222222222 0 88 55 2222 55 88 0 5 0 555555 11111111111111111111111111 8 2 5 0 33333 7 3 7 3 00 3 33 7777777777777777777 0 3 333 3 3 3 33 0 0 000000 0 7 3 7 0000000000 333 7777 3 0000 0 7 7 5 2 2222 0 0 5 2 0 0 000000 8 2 0 2222 88 0 5 5 0 22 22 888 8 0 5 00 6 7 0000 7 0 99 7 77 7 7 7 99 7 9 4 7 1111 7777 99 11111111111111111 0 999999999 7 7 2 2222222 2 3 6 0 7 0 55 3 4 0 00 8 00000 2 0 4 0 0000 5 2 5555 66666 0 88 00 4 22222222 222 0 2 0 222222222222222222 00 000 0 2 00000 55 88 00 88 00 7 7 00 8 7 77 22 2222222222 22 77777 0 333333333333 9 0 000 7 0 0 2222 000000000000000000000000000000000000000000 77777777777 00 7 7 22 0 0 0 0 777 5 2 777 0 8 6 0 4 0 4 4 000 8 2 4 2 44444444444 0 88888888 0 0 00 4 222222 0 00 4 0 8 888 8888888888888888888888888888888888888888888888888888888888888888888888888888888888 00 0 8 2 77 5 2 22222222222 55555555 5 0 5 2 5 22 2 2222 5 2 8 88 0 5555555 0 00 0 7 7 7 3 0 0 5
consensus : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGACA------TTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-TA-AGC-G--A-T-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT--GG-AGATCTGCTN--------AACAGAC-CAA-CGCCAGA-A-CAT---CCACC--------GGAT-AT--ACAGCCAGCCGAT--ACAGACCTCCCGA--TCA-ACTGTGGCAAA-CCAACAAA---AN-AGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGN-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGA-NTT--GACAGC-ACGGAC----ATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAG--GNAGANT---A-ATNCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCT-CC---AAAGAAGGGAGATCTGAGGAAC-GT-GTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGGTCATT-----GATTGGAT-CTTGANG---ACCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCA----C-A-------C---CAG--ATGCAGGA---CA-AGACAACTCGCC-----TTGCAACAACATCAGCAGGAACGGGTCTTAAGATCAAC-ATTGAA--GA-AA-ACGGAACTGATGAAGATC-AACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTCGGTGGAGA------------GCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT--GTCCCAGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACT-----GT-----AGAG---------CAAATC------------AGGA--------------------G-----CGA--AG--GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC---CA---ACCAACACCGC--A--C--CAGGCCCTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC----AGGAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
Reference ( family-19 ) : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACNTGTGAAGAANTCCTCGGCAGAANGAAGACTCAACATTCAACACAAGGAGTGGATCTCGNCTNATACCATNAGAAAACCGGATGNGAGGAANGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCANCAAAGGCAAAGGCTCAANAGCAGCGGGACA------TTTGAAGAGANC-TGTAC-ATGGCCACNAAGAAGCT-TC----AAACGAGT-TA-AGC-G--A-T-----GAAAAACCAGTCGAGGAAAAAAA-CGGAAACCCTCTCACAACAACTGAAGA-CAATTGAAGAGANGGGTAGAACACTTT--GG-AGATCTGCTN--------AACAGAC-CAA-CGCCAGA-A-CAT---CCACC--------GGAT-AT--ACAGCCAGCCGAT--ACAGACCTCCCGA--TCA-ACTGTGGCAAA-CCAACAAA---AN-AGA------------GAC-ACA-------GGAGAGCTATTACCACGCTTAAGAATGGAAAAGN-CGGCGGGGC-CTGACGAAATACCAGCGGAAGCACATCAAAGCTGA-NTT--GACAGC-ACGGAC----ATCCTNTATA-ACCTCTTCAAGAGGA-TAT-GGAG--GNAGANT---A-ATNCCTGAAGAGCGGAAAGAGGGTACCCTNATCAAGCT-CC---AAAGAAGGGAGATCTGAGGAAC-GT-GTANCAACTATCGAGGAATAACGCTCCTGTCA----GTNCCNGGCAAAGTCCTCAACAGAGTNCTTAAC--TAGAGA-GGATGAAA----GAA--GCGGATGACCCAAAGCTCCGTGACCAGCAGGCNGGTTTTNGNCGAAACAGATCATGTACCGATCAGACCGCCAGCCTACGCA--TCGT-CATC---GAACAATCANTG--GAGT-GGAAGNCCCCCCTATACGTCAGCTTCAT-AGATTA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGACG-C-TG--TGG------AA-G------CTAC-TGAGG---------CAC-TATGGAGTACCC-GAGAAGCTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGCCAGATGTCGGAAAGTTTCGAGGTNAAGACNGGAGTTCGNCAAGGATGCTTGCTGTCGCCGTTCCTGTTCTTNC--TGGTCATT-----GATTGGAT-CTTGANG---ACCACCACGACAGGN---AGGAACAACGGTATACANTGGACA-CTCC--TGACACAGCTGGATGACCTCGACTTAGCCGACGACCTGGCTCTCCTNTCGCA----C-A-------C---CAG--ATGCAGGA---CA-AGACAACTCGCC-----TTGCAACAACATCAGCAGGAACGGGTCTTAAGATCAA--ATTGAA--GA-AA-ACGGAACTGATGAAGATC-AACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTCGGTGGAGA------------GCCCATCAGAGAAGTNGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGGGCACAGACCGA----GAC-----------------GT-A-----------GGN------AAGGCAAG-----------AGCGG-CATT-C--GCCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATGAC---CACCAAANTGCGAATCTTCAAC-TCCAACGTAAA-ATCCGTCTTTCTTTACGGATNNGAAACATGGCGGACGAC-G---------AANACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT--G--CCAGGCGNATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACT-----GT-----AGAG---------CAAATC------------AGGA--------------------G-----CGA--AG--GAAGTGGGGTT--GGATTGGACACACTCTGCGGAAGCCAC---CA---ACCAACACCGC--A--C--CAGGCCCTG-ACTTGGAACCCGCAGGGCAAGAGAAAGAA-GGGACGTCC----AGGAACACCTGGAGGCGAGATAC--GGA-G-------TCGG-AATTGAAAGAACGTGNCGCCACCTGGCAAGAAGCAGCAAAAGCAGCCCAGAACCGTGTTCGCCGGAGGACTGTCGTTGATGNCCTATGTTCCTTACGGAACGACANGCCTAAGTAAGTA
gi|1 : AAATAGAGAAACCAACATTGAAACCCAGTGGCAGAACATCAAGGAACTGTGGC-------G--AGACACGTGTGAAGAATTCCTCGGCAGAAGGAAGACTCAACATTCAACACAAGGAGTGGATCTCGACTGATACCATTAGAAAATTGGATGAGAGGAATGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCAGCAAAGGCAAAGGCTCAAAAGCAGCGGGACAAGGAAATTTGA-GAGAGC-TGTAC-ATGGTCACCAAGAAGCTCTC----AAACAAGT-TCCAGCAG--ACT-----GAAAAACCAGTGAAGGAAAAGAA-CGGAAACCCTCTCACAACAACTGAAGATCAATTGAAGAGAAGGGTAGAACACTTT--AG-AGATCTGCTTTACTGCTTAACAGAC-CAA-CACTAGACA-C-T---CCACC--------GGAT-AT--ACAGCCAGCTGAT--ATAGATCTCCCAA--TCA-ACCGTGACAAA-CCAACAAA---ATCAGA------------GAC--CA-------GGAGAGCTATTACCACACTTAAGAATGGAAAA-T-CACCAAGGC-CTGCTGAAATACCAGCGGAAGC-CATCAAAGCTGACATTGAGACAGCTATAGAC----ATCCTGTATA-ACCTCTTCAA---GA-TCTCGGAG--GAAGAAT---ACATCTCTGAAGAGTGGAAAGAGGGTATCCTCATTAAGCTGCC---AAAGAAGGGAGATTTGAGGAAC-A--GCAACAACTATCGAGGAATAATGCTCCTGTCA----GTGCCCGGCAAAGTCCTCAAAAGAATTCTT--C--TCGAGA-GGATTAAA----GAA--GCAGAGGACCCAAAGCTCCGTGACCAGCAGTCTGGTTTAAGGCGAAACAGAAAATGTGCCGATCAAACAGCCAGCCTACGCA--TTAT-CATC---GAACAATCACTG--GAGT-GGAAGTCCCCTCTATATGTCAACTTTAT-AGACGA-TG-AGAAAGCTTTCGACAGCG-TG----GACAGGGAGATA-C-TG--TGG------AA-G------ATAC-TGAGG---------CAC-TATGGAATATCT-GAGAAGTTCG------TCTCCCTCATTCGTAACACCTACCAAGGCATGACATGCAGGGTCGCCCACGCTGGTCAGATGCCGGAAAGTTTCGAGGTCAAGACAGGAGTTCGACAAGGATGCTTGCTGTCACCATTTCTGTTCCTCC--TGGTCATT-----GATTGGAT-CATGACG---ACCATCACGAGGGGA---AGGAACAATTGCATACAGTGGACA-CTCC--TGACACAACTGTATGATATCGACTTCGCCGATGACCTGGCTCTCTTGTCGCA----CAA-------CCA-CAGACATGCATGA---CA-AGACAACTCGCC-----TTGCAACAACATCAGCAGCAACGGGTCTTAAGATCAA--CTTGAA--GA-AA-ACGGAACTGATGAAGATC-AACGCCACTGTC--CA-ATCA-----CC--AGT-----CACAGTTGGTGGAGA------------TTCCATCAAAAAAGTTGATTCCTTCATT---TACCTGAGGAGTGTAGTGGACAGACAGGGTGGTACAGACCAA----GAC------------------T-A-----------TGA------AAAGCAAG-----------AGTAG-CATT-C--ACCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTCGCATTAC---CACCAAACTGCGAATCTTCAAC-TCCAACGTAAA-ATCCATCTTACTCTATGGAACAGAGACATGGAGAACTGC-T---------AAAACAGCCCTGCAAAAGATCCAGACAATTT-TAC--AACA-CT--GTCTCAGGTGAATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAATGA-AGAACT-----ATAGAGGAGAG---------CAAATC------------AAGAACAATGGACATGCAAATCAGG-----TGG--AG--GAAGTGGGGTT--GGATTGGACACACTCTGAGGAAGCCAC---CA---ACCAACCCCAC--A--CGACAGG-CCTG-ACTTGGAACCCTCAGGGCAAGAGAAAGAT-AGGACGTCC----TAGAACACCTGGAGGCGAGACAC--GGA-G-------TCAG-AATTGAAAGAGCA-GGAACCACCTGGCAAGAAGCAGCAAAAACAGCCTAGAACCGTGTTCGCTAGAGGACTGTCGTTGATGTTGTGTGTTCCTTACGGAACGACAGGCCTAAGT-AGTA
gi|10 : T-TATT---GAACAATGAACC--GAATAGGAAGTCCTTCCTATATGTAAGCTTTAT-TGATTG-TG-ATAAAGTTTTTGATGGTG-TT----GACAGGG---------G--T------------------CTTC-TGGGA---------TAT-TATGGAGTACCCTGATAAA---------------CTTATTCTTAAGAAC-ACT------TGGCATACAGGTTCATACTTGGAGGACAACTGACGCAAGCATTTGAAGTTAAAACTAGAGTTTGTAACGGATATCTACTATCAC----CCTGTT-TTGC--T
gi|11 : -A-----------GGC------AAGGCAAG-----------AG-GG-CATTTC--GTAATGTTGAAGAACATTTGGGCCTCAAAACAGATCAGTTGAAAGAC---AAACA---TGCGCATCCTTAAT-TTCAACGTTAA-ATCAGTCCTTCTTTACGGATGCGAAGCATGGCGGACGAC-A---------AAGACAATGCTG
gi|12 : gctgagacgtcacagcaaggattgacaAGTAACC-GAGAAACTCT------TCTCCCTGTTCCGCAGCACCTACCAAAGCATGACATGCAGGGTCGCCTACCCTGGCCAGATGTACGAGAGTTTCGAGGTAAAAACAGAAAATCGACGAGAATGTTTGCTGTCGTCGTTCCTCTTCCTTA--TGGACTTC-----GACTGAAC-CATGAGG---ACCAtt
gi|13 : gtCTCCTGTCA----GTGCCGGGCAAGGTTCTCAACAGAGTCCT--GC--TAGAGA-GGATGAAG----GAG--GCAGTTGACCCAAAGCTCCGAGACCAGTAGGCGGGCTTCTGCAGTAACATATCTTGTCCTGACCAGATCGCCAGCCTACGTA--TCATGCATCGTTGAGCAGTCACTT--GAGT-GGA---CCCC
gi|14 : A-CGGAAACCCTCTCACAACAACTGAA------TTGAAGAAATGGGTTGAACACTTT--GGGAGATCTGCTA--------AACAGAC-CAAACAGCAGA-AACAT---CCACC--------GGATCAT--ACAGCCAGCTGATTTACAGATCGTCCGA--TCA-ACTGT-GCAAATCCAACAAA---AT-AGA------------GA
gi|15 : T-TATC---GAACAAGCAATA--TAAT-GGAATACCAGCTCATACATCTGATTCGT-AGATT--TGTAAAAGGCATTCGATAACG-TA----CATAGAAAAATA-T-TA--TGGAGATCAAA-GAAAACATTAC-AGAAGGTCACGAACCAC-TATGAAATATCT-GAAAAGt
gi|16 : -AG-ACGGAGCTAATGAAGATG-AACACCACT--C--CATAT-A-----CCCAAGT-----CTCAATCGGTGGAGA------------ACTCATGAGAG-GGTGGAGTCCTTCATT---TACCTGAGACGTATAGTTGACAAGCATGGAGGCA
gi|17 : TTAACATCCAATGGCCTGAA--AGGAACA-C-AATGA-AGAACTATGAAGC-----AGAG---------CAAATC------------AAGA--------------------A-----CGAATAA--GGAGTGGGATT--GGATTGGACACACTTTG
gi|18 : CCTCTCTCTACACCAACTTCAT-CGTTTA-TT-AGAAAGCGTTCGATACAG-TG----CACTGAGAGACG-C-TGCACGG------AG-G------CTAC-GGAG
gi|19 : GTCAATCTATGCA--CTTT-CATA---GAACAGTCACTG--GAGT-GGAAGCCCCCCC
gi|2 : GGACA------TATGAA-AGATTATGTACGATG--TAATAAGAAGCTATCTGGAAAACGAATGTA-AAC-A--A-------GAAAAAACAGTCAAAGCAAAA---CAGAAG-------GTGACATCT-AAGA-TCGTTGTAG-GAAGG--AGAACA-TTTAAGA-AGA---------------AGCGAATTCGA-ATTTAGA-G-CATTTACCACCTAATCTTTGGAT-ATTAACCACCAGCAAGT--A-AGGCC---CGAAATTAGACTGCGGAGCA-CCAACCAA---AG-AGA------------GATTATA-------GTAATCTTATGAACA-GCT-AAAAATGGTAACGCTCAGCGGAGCTCTGATAAACT-CCATCAGAAGCACA--AGAGCAGA-TTTTTGACAGC-ACGGACTGGCATTCTCTACCCACTGTTTCAAGAGGAATAT-GAAGTAGCAGACT---A--TTCCTAAAGAATGGAAAG-GGGTACA-TAATCAAGCT-CCCCCAAAGAAC-----TCTA--GAACTGTTGTATAAACTATAGAG-AATAACACT---ATTAAATTGTTCCAGGGAAA-TATTCAACCGA-TGTTTAAC--TAAACA-GAATGAAAACAAGAAATGTGGATAAC---AAGCCACGTGACCAACAAGCAGGTTTTTCTTAAAAAGGA----GTATCAA-CGGACCACAAGGCTACGTACCCCGT-CAT----GAACAAT--GTGCTGAAT-GGAATTCCTCCCTATATGTAGGCTT-ATAAGATTACTG-AGAAAGATTTTGACAGTGTTGTGTTGACAGGGAGACGACATG--TGG------AACG------CTTCTTGGGG---------CATATATG
gi|2 : CGGAGTTAA-ACTAGAGATCGT-AAGGATGTCTACTGTCACCCTTTCTGTTCTTGCATTGG-CATTATAGGGAT-GGAA-ATTGAATTCTCCCAC-ACAATAGGATGAAGGAACA-C------CATGGGAC--CTCCGTTAACG-AGGTAAA--ACTTTG---CAGTTGTCGAC---ACTCTT-TTTCACA----TTA-------CT--CGG--ATCCAAAATGCCAGAGAAAA-TGGCCACTGGTTGCAA--ACATCAGCA---ACAG---TTAGGATTAAGAATAGAACGGACAG-AAGGAA--GA-GAAGATTTAAGAGCAA-ATA--CA-TTCAGGATGCT--ACTTTGAACATAGAAAATGAAGA------------GA--ATTAAAGAAGTTGAAA---TTGTTACATACCTTTGGTGTATAGTGGATTGACAGGAGGGAACAGATCGAAGCGGAC-----------------GT-A-----------AAACACTTTAAGGCCAA-----------AGCAGACATA-CCTGCTTTACTTCAAAATATCT-----T-------GAA-ATTTAC-TGATACGCACCAGAGTAAGACTGTTCAACACCCAATGTAAGCAGCGCTCTTTGTTTATGAGTCAGAAAC-TGATG-ACAACTGTATTTTCTTAACACAGATC-----AGGATCCAGAC-ATTCATACGGATCGCCT--G----AGACGAATTTCCAG-ATC-GATGGCTTGGACCAAAATCAACGAACACTAGGACT-----GT-----GGAGAGAGCAAACCAAATCCCGATTTCAAAGAGGA--------------------GATTCTTGA--AGCCGAATGGGGGTTCAGGAAGGGCAACACTCTTCGCAAACCACATACACATACCAACATCGCT-A--G--CAAGCACTATCCTCGGAA-CCGCAGGG-AAGCGCAAGAA-GGGTTGGCCAAAGAGAAACACCT----GCGAGAGACCTGGAGG-------TCGGCACCTAAAAGAACacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattgacggagttaaactagagatcgtaaggatgtctactgtcaccctttctgttcttgcattggcattatagggatggaaattgaattctcccacacaataggatgaaggaacaccatgggacctccgttaacgaggtaaaactttgcagttgtcgacactctttttcacattactcggatccaaaatgccagagaaaatggccactggttgcaaacatcagcaacagttaggattaagaatagaacggacagaaggaagagaagatttaagagcaaatacattcaggatgctactttgaacatagaaaatgaagagaattaaagaagttgaaattgttacatacctttggtgtatagtggattgacaggagggaacagatcgaagcggacgtaaaacactttaaggccaaagcagacatacctgctttacttcaaaatatcttgaaatttactgatacgcaccagagtaagactgttcaacacccaatgtaagcagcgctctttgtttatgagtcagaaactgatgacaactgtattttcttaacacagatcaggatccagacattcatacggatcgcctgagacgaatttccagatcgatggcttggaccaaaatcaacgaacactaggactgtggagagagcaaaccaaatcccgatttcaaagaggagattcttgaagccgaatgggggttcaggaagggcaacactcttcgcaaaccacatacacataccaacatcgctagcaagcactatcctcggaaccgcagggaagcgcaagaagggttggccaaagagaaacacctgcgagagacctggaggtcggcacctaaaagaacaggg
gi|20 : ggacatatgaaagattatgtacgatgtaataagaagctatctggaaaacgaatgtaaacaagaaaaaacagtcaaagcaaaacagaaggtgacatctaagatcgttgtaggaaggagaacatttaagaagaagcgaattcgaatttagagcatttaccacctaatctttggatattaaccaccagcaagtaaggcccgaaattagactgcggagcaccaaccaaagagagattatagtaatcttatgaacagctaaaaatggtaacgctcagcggagctctgataaactccatcagaagcacaagagcagatttttgacagcacggactggcattctctacccactgtttcaagaggaatatgaagtagcagactattcctaaagaatggaaaggggtacataatcaagctcccccaaagaactctagaactgttgtataaactatagagaataacactattaaattgttccagggaaatattcaaccgatgtttaactaaacagaatgaaaacaagaaatgtggataacaagccacgtgaccaacaagcaggtttttcttaaaaaggagtatcaacggaccacaaggctacgtaccccgtcatgaacaatgtgctgaatggaattcctccctatatgtaggcttataagattactgagaaagattttgacagtgttgtgttgacagggagacgacatgtggaacgcttcttggggcatatatgacactaaaattgtaaatatttatctgcaattttctcatgaacactcttggcagcagggtcattacatagatgacattga-------GGAGAGCTATTACCACACTTAAGAATGaggg
gi|3 : --TGG------AA-G------ATAC-TGAGG---------CAC-CATGGAGTACCC-GAGAAGCTCG------TCTCTCTCATTCATAACACCTACCAAGGCATAACATGCAGAGTTGCCCATGCTGGCCAGATGTCGGAAAGTTTCGAGGTCAAGACAGGAGTTCAACAAGGATGCTTGCTGT
gi|3 : aagcaacaGGATGCTTGCTG---TTCATCACGACAGGT---AGGAGCAATGGAATACAGTGGACA-CTCC--TAACACAACTGGATGATCTCGACTTAGCCAATGACCTAGCTCTCCTCTCGCAAAACC-A-------CAGGCAG--ATGCAGGG---CA-AGACAACTCGCC-----TTACAACGATAACAGCAGGAACAGATCTCAAGATCAA--ATTGAA--GA-AA-ATGCAGAGGATGAAGATC-AACACCACTGTC--CA-ATCA-----CC--AGT-----CACAGTTGGTGGAGA------------GTCCATCAAAGAAGTGGATTCCTTCATT---TACCTGGTGAGTGTAGTGGACAGACAAGATGGCAAAAACCAA----GACATCATGACAAGTCAAGAAT-A-----------GGA------AAAGCAAG-----------AGAAG-TATT-C--ACCATGCTCAAGAACATCTGGGCCTCAAA---GAACATTTGCATTAC---CACCATACGGTGAATCTTCAAC-TTCAATGTAAA-GTCCATCTTACTTTATGGAGTGGAGACATGGAGAACTAT-G---------AACACAGCCCTGCAAAAGATCCAGAC-ATTT-TAC--AACACCT--GTCCCAGGTGCATCCTTAACATCCGATGGCCTGAA--AGGATCA-CAAAT------------------------------------AATC------------AG----------------------G-----TGA--AG--GAAGTGGGGTT--GGATTGGACACACTGT---GAA---------------CAACACCGCAAA--C--CAGGCCCTG-ACTTGGAACCCACAGGGCAAGAGAAAGAA-GGGATGTCCT---AGGAACACCCGGAGGCAAGATAC--GGA-G-------TTGG-AATTGAAAGAACATGACACCACCTGGCAAGAAACAGCAAAAGCAGCCCAGAACTGTGTTCGCTGGAGGACTGTCATTGATGGCCGATGTTCCTTACAGAACGACAtcatcacgacaggtaggagcaatggaatacagtggacactcctaacacaactggatgatctcgacttagccaatgacctagctctcctctcgcaaaaccacaggcagatgcagggcaagacaactcgccttacaacgataacagcaggaacagatctcaagatcaaattgaagaaaatgcagaggatgaagatcaacaccactgtccaatcaccagtcacagttggtggagagtccatcaaagaagtggattccttcatttacctggtgagtgtagtggacagacaagatggcaaaaaccaagacatcatgacaagtcaagaataggaaaagcaagagaagtattcaccatgctcaagaacatctgggcctcaaagaacatttgcattaccaccatacggtgaatcttcaacttcaatgtaaagtccatcttactttatggagtggagacatggagaactatgaacacagccctgcaaaagatccagacattttacaacacctgtcccaggtgcatccttaacatccgatggcctgaaaggatcacaaataatcaggtgaaggaagtggggttggattggacacactgtgaacaacaccgcaaaccaggccctgacttggaacccacagggcaagagaaagaagggatgtcctaggaacacccggaggcaagatacggagttggaattgaaagaacatgacaccacctggcaagaaacagcaaaagcagcccagaactgtgttcgctggaggactgtcattgatggccgatgttccttacagaacgaca
gi|4 : aagcaacatggaagatactgaggcaccatggagtacccgagaagctcgtctctctcattcataacacctaccaaggcataacatgcagagttgcccatgctggccagatgtcggaaagtttcgaggtcaagacaggagttcaacaaCCTTCTACATCAATTCCAT-AGGCTA-CT-AGAAGGCATTCGACAGTG-TA----GATAGAGAGACG-C-TG--TGG------AA-G------CTGC-TGAGA---------CAT-TACGGAGTTCCC-CAGAAGATCA------TCTCCCTCATCCGCTGCACCTTCCA-GGAATGAGTTGCAAGATCGCGCA-----GC----TGTCAGACAGTTTCGGGGTGAAGACTGGAGTACGTCAGGGTTGCATTCTGTCGCCATTCCTCTTCTTCC--TGGTCATT-----GATTGGAT-CTTGAAG---ACCACTACAACAGGC---AGGAAAAATGTTATACATTGGGGGGCTCT--GGACACAGTTGGATGACCTCGACTTTGCGGACGATCTGGCACTTCTGTCACA----C-AGCTACTCC---CAG--ATGCAGGA---CA-AGACCACTCGCC-----TTGAAACAAAATCAGCAGAGACAGGGCTTAAAATCAGC-A--GAA--AA-AATACCGAACTGATGAAGATC-AACACTACTGCCAACA-A--A-----CC--AGT-----CACAGTCGGTGGAGA------------GCCTATCAGAGAGGTGGAGTCTTTTGTC---TACCTGGGAAGTGTGATCGACAAGCACGAGGGCACAGACCGA----GAC-----------------GTCACAGCAAGGATTGGC------AAGGCAAG-----------AGGGG-CTTC-C--GTAATGTTGAAGAACATCTGGGCCTCCAA---ACAGATCAGTAGGAA---GACGAAAATGCGCATCTTCAAT-TCCAACGTTAA-ATCCGTTCTTCTTTACGGATGTGAAACATGACGGACGAC-A---------AAGACAA---TG-------------C-ATTT-TTC--AACACCT--G--CC
gi|5 : aGGAACGGGTCTCAAGATCAAC-ATTNNN--NN-NN-NNNNNNNNNNNNNNNNNN-NNNNNNNNNNNN--NN-NNNN-----NN--NNN-----NNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCATCAGATGAACCGAGTCCTTCGAT---TAT----GGAGTGTGGTGAACAGACANNNNNNNNNNNNNNNN----NNN-----------------NN-N-----------NNN------NNNNNNNNNNNNNNNNNNNAGCAG-TGTT-C--ACCATGCTCAAGAACATTTAGCCCTCCAA---GGACATCCACATGAC---CACCtaag
gi|5 : aactGTAGAAGATCCAAAC-ATTT-CAC--ATCACCTAGG--CTAAGCGCATCTTTAGCATCCAATGGCCTGAA--AAGAACA-CAAATGA-GGAACT-----GT-----AAAG---------GAAATC------------AGGA--------------------------CAA------GAACTGA----------TAGAC---CT-TACGGAAGCTAT---TA---TTCAGCATCAC--ATTC--CAGGTCCTG-ACTTGAAACCCGCGAGGTAAGAGAAAGCGCGGGAATTCC----AGAAACACATGGAAGCGAGATAT--GGA-GAAAACATTCAT-GATTGAAAGCATGTGTCGCCACCTGGAAAGGTGCACCTCGAGTAGCTCAGAACTGTATTTGTCGGAGGAC--TCGTGTATGACCTATGTTCCTTACGGAACGATATACCTAAGTAAGTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcgtagaagatccaaacatttcacatcacctaggctaagcgcatctttagcatccaatggcctgaaaagaacacaaatgaggaactgtaaaggaaatcaggacaagaactgatagaccttacggaagctattattcagcatcacattccaggtcctgacttgaaacccgcgaggtaagagaaagcgcgggaattccagaaacacatggaagcgagatatggagaaaacattcatgattgaaagcatgtgtcgccacctggaaaggtgcacctcgagtagctcagaactgtatttgtcggaggactcgtgtatgacctatgttccttacggaacgatatacctaagtaagta
gi|6 : aactggaacgggtctcaagatcaacattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcccatcagatgaaccgagtccttcgattatggagtgtggtgaacagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcagtgttcaccatgctcaagaacatttagccctccaaggacatccacatgaccaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatcAACCCTCTTATAACAACAGAAGAACAATGGAAGAGATGGGCAGGATATTCT--GG-AGATCTAGTC--------AATAGAC-CAG-CGCCAGA-A-------------------------AT--ACAACCAGCCCAT--CCAAACCTCCCGA--ACA-ACTGTGACAAG-TCAACAAAGACAA-AGAAAAAAAACCAAAGAC-ACAAAGATGAGGAGAGCAATCATCACGCTCCAAAACGGAAAAGA--GGCAGGTC-CTGACGAGATACCCGAGGAAGCA-ATCAAAGCTGA-GTT--AACA--------------TCTTTCATA-ATCTCTTCAAGAAGA-TAT-GG-G--AGAGAGTGGAA-ATACCAGAGGGGCGGAAAGAGGAAACCCTG---------CC---AAAGAAGGGAAATCTGAGGGAC--T-GTGGCAACTACCGTGGAATCGTGCTCCTCTCA----GTTTCCGACAAAGTCCACAA
gi|7 : gcCTTAACAGTGGAAAAGGATGAAA----GAA--GCAAATGACCCAAAGCTCCGT---CAGCAAGCTGCTTTTAGGCGAAACAGATCATGTACTGATCAAATAGCCAGCCTACACA--TCAT-CATC---GAACAATCAATG--GAGA-GGAAGGTCCCTCTATATGTAAACTTCAT-AGATTA-TG-AGAAATCTTTCGATAGCG-TG----GATCGGGAGACA-C-TG--TGG------AA-G------GTAC-TGAGG---------CAC-TATGGAGTACCT-GAGAAGCTCGTCTCTCTCTCTCTCATTCGTAACACCTTCCAAGGCAAGACATGCAGGGTCGCCCTTGCT
gi|8 : gatcacaaattgccaccaacaaccaacaaaatcagagaaccacactAAATAAAAAAA---------AAAC--AGTGGCAGAACATCAAGGAACTGTGGCTACATGGGCTAGGCACTTGTAAAGAAATCCTTGGCAGAATGAAGACTCAACA-------CAAGAAGTGGATCTCGTCTCATACCATGAGAAAACCGGATGTGAGGAAGGAAAAGAAAATGGCACTAAACACAAGCCGAACAAGAGCACCAAAGGTAAAGGCTCAATAG------GTC--------TTGAAGAGGAC-TATAC-A--GCCACAAA--------C----AAAGAAGT-TA-AGC-GAAA-TATTAGGAAAGACAAA-CGGGGAAAAAAATCAGAGA
gi|9 : aGGAACAACGATATAAACTG-ACA-CTCC--TGAGACAGTT--------------TAACCGATGACCTGGCTTTCCTCTAGCA----C-A---------------------GGA---CA-AGACAATTCGTC-----TCGCAACACCATTAACTTGAACGt
gi|9 : AGTTGGTAGCGA------------GCCTATCAGAATAGTCGAGTCCTTCGTT---TACCTGGGGAGTGTGGTGGACAGACAGGGGTGC-CATGTCAA----GA------------------AT-C-----------GCT------AAGGCAattagctaaaacgattcgcagtgagttggtagcgagcctatcagaatagtcgagtccttcgtttacctggggagtgtggtggacagacaggggtgccatgtcaagaatcgctaaggcatatatcacaa