lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111
lowQualScore : 2 1 22 11 77777777777 2 22222 222 11 111 3333333 777777777777777 22222 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 222 11 11 11 1111 555555555555555 3333 000000000000000000000000000000000000000000000000000000000 22222 11 111 44 1 11 333 2 2222 111 22 11 111 6666666666666 1 666666666 33 4444444444444444 11 333333333 333 22222 333333 77777777777777777777777777777777777777777 1 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 11 2222 2222 22222222222 111111 22 1111 111111111 333333333333 111 33333 2222222 333 1111 22 77777777777777777777777777777777777777777777777777 111 1111 1111 1 777777777777777777777777777777777 22 111 111 4444444444 11111 44444444444444444444444444444444444444444444444444444444444 111 111111111 5555555 1 111 1111 3 111 1 2222 1 111 333 22222222 111111 2 222222222 2
lowQualScore : 55 7 1 3 7 88 55 3 3 22 6 22 33333333333 3 99 1 99999 444 55 6 6 111 6 5555555 6 99 888888888888888 77 4 44444 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 5 666 5 55 66 77 99 77 5 2222 5 000000000000000 4 2222 888888888888888888888888888888888888888888888888888888888 4 4 66666 33 5 7 666 6 3 22 0 33 2 999 3 1 6666 777 3 33 33 999 2 1111111111111 0 000000000 00 2 2 1111111111111111 6 6 88 444444444 99 6 222 4 00000 77 888 5 888888 888 44444444444444444444444444444444444444444 0 5 5 66 5 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 4 4 1 99 55 33 6666 8 555 4 3333 3 55555555555 99999 3 99 444 99999 777777 66 3 3 6 9999 888888888 222222222222 000 44 3 3 55 00000 4 4 1111111 4 666 55 3 1111 3 00 3 44 2 33 33333333333333333333333333333333333333333333333333 0 444 000 5 2 1 55 66666 2 3333 3 8 2222 5 99 4 4 777 4 4 4 444444444444444444444444444444444 8 8 44 4 3 3 888 44 3 3 888 2 66 666 4444444444 4 55 4 00000 4 8 22222222222222222222222222222222222222222222222222222222222 3 333 666666666 0000000 6 111 4 4 1111 444 2 8888 55 000 8 77 4 3333 4 3 4 66 8 222 4 4 4 8 777 55555555 777 222222 4 55 4 4 4 444444444 3 4 4 55 1 5 9
lowQualScore : .. . . . . .. .. . . .. . .. ........... . .. . ..... ... .. . . ... . ....... . .. ............... .. . ..... ................................................................................................... . ... . .. .. .. .. .. . .... . ............... . .... ......................................................... . . ..... .. . . ... . . .. . .. . ... . . .... ... . .. .. ... . ............. . ......... .. . . ................ . . .. ......... .. . ... . ..... .. ... . ...... ... ......................................... . . . .. . ............................................................................................. . . . .. .. .. .... . ... . .... . ........... ..... . .. ... ..... ...... .. . . . .... ......... ............ ... .. . . .. ..... . . ....... . ... .. . .... . .. . .. . .. .................................................. . ... ... . . . .. ..... . .... . . .... . .. . . ... . . . ................................. . . .. . . . ... .. . . ... . .. ... .......... . .. . ..... . . ........................................................... . ... ......... ....... . ... . . .... ... . .... .. ... . .. . .... . . . .. . ... . . . . ... ........ ... ...... . .. . . . ......... . . . .. . . .
lowQualScore : 00 3 8 6 8 66 00 6 6 11 7 77 55555555555 0 22 0 77777 555 00 7 7 777 7 0000000 7 22 000000000000000 99 3 00000 666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 7 111 7 77 00 99 33 99 7 1111 7 666666666666666 4 1111 111111111111111111111111111111111111111111111111111111111 0 0 55555 66 7 9 444 7 2 55 0 22 5 000 2 5 8888 555 0 22 88 888 5 0000000000000 0 000000000 22 5 5 1111111111111111 7 7 77 222222222 22 7 444 3 99999 99 888 0 888888 888 55555555555555555555555555555555555555555 0 0 0 99 0 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 4 4 1 99 66 99 0000 0 333 5 6666 6 44444444444 66666 6 66 111 22222 999999 00 6 6 6 7777 222222222 555555555555 000 66 3 3 55 55555 0 0 0000000 0 888 00 6 4444 6 77 3 66 9 77 99999999999999999999999999999999999999999999999999 7 444 333 0 5 7 99 22222 5 7777 6 0 7777 5 55 4 4 888 4 4 4 222222222222222222222222222222222 0 9 99 4 1 1 555 66 1 1 555 3 33 222 7777777777 8 55 0 00000 0 0 44444444444444444444444444444444444444444444444444444444444 6 666 000000000 5555555 0 000 0 0 0000 222 5 5555 55 999 1 22 0 0000 2 3 4 11 9 222 4 4 4 9 444 22222222 000 777777 0 55 0 0 0 000000000 4 0 0 66 9 0 6
consensus : AAGAT--G-GGTGACTTT-ATC--GA--GCG-GA-GTG-NCCTATTCA-C-GACTCAGGGTAC-----ATTGCGAAAATCGGGAGTTTAAAAT--CCGC-ATTNATTTTA-C-CTGTA-T-TTA-CAATAGA---TACA-GTAC------C-G--TTCTAAAA--------------GTGCTA--TTCAAAAT--A--ATGCATT----C-----N--------A--AAAANACAA----ACA-TAGA--TC--A--TGC--ATCAAAG--CA-GA-A----TAN-T--ATA--------CAG-AA-TCAT-TCGTCAG-AA--TTGGTTTCACGGG--CA-GCA--T-C----AT-GTAT-------T-TTCA-GACATT-AAGCGG-G-TTTTCAACA----CT--CA------CA-----T------A---------T--------------TACATTG-ATGTCTGG-AGTAC-C--AAGGTA--CCAAA-TGACAC-TGGCATATAT-CAGAGTT-TTTGAAATT-GTT-CTCTT-C-AACTTTCCTTTCAA-CTGCCGTTTA-N--AAC---CANCACCCGTACTTC--ACGGGGA-GNCCCATAA--ACT-TGTTTACATTT-AT--CCGCT--AGCCGC-ATGTTCGAATCAAGTTTACTTTGT-A--GT-CGT-CAATTAA--GAC-A--C--A-TATTT-ATTCGTAAA---C-TT--AGCA---T-AAAA-T--GCC---AAA---AAGA---TAT-----TATA-AT----GGT-AT------GTTT-AGAAT-AA-A--TT-CAT--CACC-----A------C----------AAAGAGAAAAA---------AA------------------AA-----------AC---A-----CG-T-AGGAAAAAATG-G-GTATTCGAA--CCACAGGTATA-CATTATGNA----TTC-ATCA-NT------AAGA--C--T-GTCGCTAT-A-C-GAT-TC-CGGCC----TATTCATCTC-T-TGCAC-G-ATAA---G--G--GAATT-------T--NNAG---CT--ATTTA-AA-GTC-ACCTGGCTTA-GGAC-TTAG-A-----AAT-TTTCTTG---AT--AA-TGCG----G-CAAAAG-TTAT-A--T-ACAA--AA--A----AGTAAG-TT----T---TTT-----------TT----------TTTC---A---TAG-A-GTGGGTC--AA-----GTCTCCAT-A--C-T-TTTATTT-ACA---AAAACATT--TT-A-C---ACA-TGAA-C-AT--A--A-CTA--CCAT--ATTTT------TAC-TCAGTTTA-CAA-TGGAGA-CT-TG-ACCC-CACT-C-TA---TGCGAAAT-TT-TTGCTTGGAAA---A--GTC-AAATTTGC--TGTT-ATT-----T-T-GTG-CNTTT-T---TCGCGTATAACGT--CATTTTC-AAA----T--------T-TG--A--TTTT-T---CAATGTTCCTTTTA---------CTTGN-G--C-ACACAAGAA---AA-G-TTN---TT-T-TTGA-ACAC----TAT--GGN-CTGATT-TGT-TTT--AACTAGAA-T-T--AAA-TTT---TCCG-TTT-TCT-GGGG-AGTTTTCAATTTT--AAACCTTTG---AT----ATT-TG--TCCC-TC-TG---------TGGGCACTC-CGCT-C-GATAAAG-TCACC-CATCTTCT
Reference ( gi|3 ) : AAGAT--G-G-TGACTTTTATC--GA--GCG-GA-GTG-GCCTATTCA-C-AACTCAGGGTACCGTT-ATTGCGGAAATCGGGAGTTTAAAAT--CCACCATTCATTTTAAC-CTGTT-T-TTA-CAATAGA---TACA-GTA-------C-G--TTCTAAAA------A------GGTGCTA--TTCCAAAT--A--ATGCATT----T-----T--------A--ATAATATAA----ACA-TAGA--TC--A--TGC--ATCAAAA--CA-GA-A----TAA-C--ATA--------CA--AA-TCAT-TCGTCAG-AA--TTGTTTTCACAGG--C--GCA--T-C----AT-GTAT-------T-TTC--GACATT-AAGCGG-GTTTTTCAA-A----CT--CA------C------T------A---------T--------------TACATTG-ATGTCTGG-AGTA--C--AAGGTA--CCAAA-TGACAC-TAGCATATAT-CAGAGTGGTTTGAAATT-GTT-CTCTT-A-AACTTTCCTTTCAAACTGCCGTTTA-A--AAC---CAACACCCGTA-TTC--ACGGGGA-GGCCCATAAA-ACT-T--TTACATTT-AT--CAGCTTTAGCCGCTATGTTCGAATCAAGTTTACTTTGTTA--GT-CGT-CAATTAA--AGC-A--C--A-TATTTAATTCGTAAA---C-TT--AGCA---T-AA---T--GCC---AAA---G------T-T-----TATA-A-----GGT-AT------GTTT-AGAAT-AA-A--TT-CAT--CACC-----A------C----------AAAGAGAAAAA---------AA------------------AA-----------AC--GA-----CG-T-AGGAAAAAATG-G-GTATTCGAA--C-ACAGGTATA-CATTATGTAC---TTC-ATCA-AT------ATGA--C--T-GTCGCTAT-A-C-GAT-TC-CGGCC----TATTC-TCTC-T-TGCA--G-ATAA---G--G--GAATT-------T--ACAG---CT--ATTTA-AA-GTT-ACCTGGCTTA-GGAC-TTAG-A-----A-T-TTTCTTGTT-AT--AA-TGCG----G-CAAAAGGTTAT-A--T-ACAA--AA--A----AGTAAATTT----T---TTT-----------TT----------TTTC---A---TAG-A-GTGGGTC--AA-----GTCTCCAT-A--C-T-TTTATTT-ACA---AAAACATT--TT-A-C---ACA-TGAA-C-AT--A--A-CTA--CCTG--ATTTT-----ATAC-TCAGCTTA-CAATTGGAAA-CT-TG-ACCC-CACT-C-TA---TGTGAAAT-TT-TTGCTTGGAAA---AATGTCAAAATTTGC--TGTT-ATT-----T-T-GTG-ATATT-A---TCGCGTATAACGT-TCATTTTTCAAA----T--------T-TG--A--TTTT-T---CAATGTTCCTTTTA---------CTTGC-GCTC-ACACAA-AA---AA-G-TTA---TT-T-TTGACACAC----TAT--GGT-CTGATT-TGT-TTTA-AACTGGAA-T-T--AAA-TTT---TCTG-TTT-TCT-GGGG-AGTATACAATTTT--AAACTTTTG---AT----ATT-TG--T-CC-TC-TG---------TGGGCACTC-CGCT-C-GATAAAG-TCACCTCATCTTCT
gi|7 : AAGAT--G-GGTGACTT--ATC--GA--GCG-GA-GTG-CCC
gi|8 : cggttttcaacactcactaattacattgatgtctggagtacccaaggtaccaaatgacactgcatatagcagagtttttgaaattgttctttcaactttcctttcaacctgccgtttaacaaaacacaacccgtacttcacggaggccccatacttgtttacatttattcactaaaccgcatgttcgaatcagttacttgtagttcgtcattaagactacatattattcgtaaaacttagcataaaaagccaaaaagatattaataatggtatgtttagaataaattcatgccatcaagaaaaaaaaacacgtaggaaaaaatggtattcgaaaccacaggtatacattatgtattcatcactaagactgtcgctatacgatctccggcttattcatctcttgcacgataagggaattttagctatttaaagtcacctggcttggacttagaaattttctgataatgcggcaaaagtttatatacaaaagtatattttttttcaatagagtgggtcaagtctccatacttttatttacaaaacattttacacatgaacatttactcagtttcaatggagacttgacccactcctatgtgaaattttgcttggaaaagtcaaatttgctgttatttttgtgcgtttatcgcgtgtacgtcattttcaatttgattttttcaatgttccttttacttgcgcacacaagaaaagttattgtttgaacactatggtctgattgttttaactagaatttaaattttctgttttctggggaagtttcattttaacttgattttgtccctctgtAAGAT--G-GGTGACTTT-ATC--GA--GCGTGA---G-GCCCActtt
gi|2 : gtttattcgtaaacttagcataaaatgccaaaaagatattataatgatatgtttagaataaattcataccaccaaagagagaaaaaaagaaaaaaaagaaaaagaaaaacacgtaggaaaaagcggtaatcgaaccacaggtatgcattttggactcatcagtaagactgtcgctatacgatctcggctattcatctcttgcacgatatgggaattttaagctatttaaagtcaactggcttggacttagaaattttcttgataatgcggcaaaagttatatacaaaaagtaagtttttttcatagagtgggtcaagtctccattttttatttacaaaacattttacacatgaacatacactaccatattttactcagtttacaatggagatcttgacccactttatgtgaaattttgcttggaaaagtcaaatttgctgttatttcgtgcgtttttcgcgtatacgtcatgttcaatttgattttttcaatgtcttttacttgcgcacacaagaaaagttatttttgaacactatggtgctattgtgttaactagaatttaaatttttctgttttcaggggagtttcaattttaactttgatatttgtccctctgAAGAT--G-G-CGTGTTTAATC--GATTGCG-AC-GTG--CCTATTCA-CTGACTCAGGGTACTCTG-ATTTCGAAATTCGGAGTTTTATTCT--CCGTCATGCA-TTTA---CTGTA-T-TTATCAATAAA---TACATGTATCCTATTT-G--TTCTAAAATGCCTTACTGGTTGGTG-TA--TTTCAAAA--A--ATACATC----CGCA--TGAAA----A--AAAAGATAC----ACACTAGA--TCTTA--TGCG-ATC-AAG--CAGGA-A----TAC-T--GTAATTC----CATGAATTCATATCGTCAGTAATCTTG-TTTCACAGGTCC--GCA--TGC----ATGGTA--------T-TTCAGGACATTGAAGCGACGTTTTTCAACA----CT--CC------G------TCATGTAA---------T--------------TACATTGAATGTCTGG-AGTA--c
gi|4 : aagAAGAT--G-GGTGA-TTTTGGC--GA--AC---A-ATATGCCTTTGCAAC-GACTCA---------T-AT-GCG---ATCGGGAGTTTAAAAT--CCAT--TTGATATTA-C-CTGTA-T-TTA-CAATAGA---TACG-GTAC------C-G--TTC---AA------A------TATGCTA--TT-CAAAT--ATTATGCATTCACGC-----C--------A--AAAACACAAT---ACA-T-GG--TC--A--TACAAATCAAAAGCTA-GA-G----TAGTC--ATAATAAGGTCCAG-AA-TCA--TCGTCAA-AT--TTG-CTTCACAGG--CA-GCGATT-C----AT-GCATATTATA-T-TTC--AGAATT-AAGCGT-G--TTTCAACA----CTTGCA------CATG---T------ACAATGTAATT--------------TACATTG-GAGTCTGG-ACTAT-C--CAAGTA--CAAAA-CAA-GT-GGGCATATAT-atcctgattgcatagttggcttctatactttatcttgaagtaacttcctttagagtttttgaaatttgtttctcttgcaactttcctttcaatgccgtttacaacacacaccactcgtactctcacgggaggccctacttgttacattttattcactagccgtatgttgaatcagttaacttgtagtcgttcataagacatacatattttttcgtaagcttagcaaaataaaatgctcaaaaagatattatacactggtacgtttaaaataagatccataccaaccaaacgagagagaaaaaagagaaagaaaaaacacgatagggaaaatggtattcgaaacaggacagtatgcatttggatcaatccagctaagacgtcgcaaaaccgactcggctaggtcattatctttgcacgtataacatgggaatttttaagctatttaagtccctgcttggacttagaaattttcttgatatatggcgtgcaaaagttatatacaaatgtaagctttttttcatagagtggtcaagtctccatatctgtttatttataaatacattgttaacactgaaccattatcaatccggatattttacctcggttacaatggagactctgtaccgcactctattggaaatttgtgcttggtaaaagtaaatttgctgtatttctgtgcgtctttccgcgtacaaagtcatttttcaaattctggaattttttcatgtttcttttacttgctgcacacaagacaagttatttttgaacactatggtcctaattgtagttaatctagaatttaaaattttctgtttttctgggggagtttcaatttttaaaacttgaatatatttgtttcctcttgctgggcactccgctctgataaagtcacccaatctctttg
gi|4 : AAGAT--GTG-TGACTTT-AT---GA--GCG-GA-GTG-ACCgcgcgcagcacttaaacagtacggctcgcatttgctattgacaaaaccaatcacaaaataattgtagggtgaaattaccacaagttgtaatgattttagctttgtgtgtcagagattgaaattttgccattgtcgcaattaagactacataattaaaggtaaagattagcataaaattgccaaaattaagaatataatctgtagactagtttaaataaattcataccaccaaagagaaaaatataattaaaaaaaatacgtagaaaattggtattcgaaccacagagatacatgtacagactcatcataaagacaatatcgcttcatctaggctgtttatctctgtgagaaatgctgaaatatcaagaaactatttaaaagtcacctgtattggacttaaaaattttcctttgaaactgcggcaaatctgatacaaaaaggtaagttttttcataagtgggtcagtctccataaattttattttacaaaacattttacatatgaacatacaactaccaatatttactcagtttacaatggagacttgcccactctattgcgaaattgtcttggaaaggttcaaatttactttattttggctttatcgcgtaacgtattttctaatatgattttttcaatgttccttttactggtacacaagaaagctttttttcgacactatggattggtttaactagaatctaatgttccgtttgtattaggagatttcaatttaacctttgatattgtccctcttggtcactccgctcataaagtcacacatcttc
gi|10 : aagatgggtgattttggcgaacaatatgcctttgcaacgactcatatgcgatcgggagtttaaaatccatttgatattacctgtatttacaatagatacggtaccgttcaaatatgctattcaaatattatgcattcacgccaaaaacacaatacatggtcatacaaatcaaaagctagagtagtcataataaggtccagaatcatcgtcaaatttgcttcacaggcagcgattcatgcatattatatttcagaattaagcgtgtttcaacacttgcacatgtacaatgtaatttacattggagtctggactatccaagtacaaaacaagtgggcatatatgcgcgcagcacttaaacagtacggctcgcatttgctattgacaaaaccaatcacaaaataattgtagggtgaaattaccacaagttgtaatgattttagctttgtgtgtcagagattgaaattttgccattgtcgcaattaagactacataattaaaggtaaagattagcataaaattgccaaaattaagaatataatctgtagactagtttaaataaattcataccaccaaagagaaaaatataattaaaaaaaatacgtagaaaattggtattcgaaccacagagatacatgtacagactcatcataaagacaatatcgcttcatctaggctgtttatctctgtgagaaatgctgaaatatcaagaaactatttaaaagtcacctgtattggacttaaaaattttcctttgaaactgcggcaaatctgatacaaaaaggtaagttttttcataagtgggtcagtctccataaattttattttacaaaacattttacatatgaacatacaactaccaatatttactcagtttacaatggagacttgcccactctattgcgaaattgtcttggaaaggttcaaatttactttattttggctttatcgcgtaacgtattttctaatatgattttttcaatgttccttttactggtacacaagaaagctttttttcgacactatggattggtttaactagaatctaatgttccgtttgtattaggagatttcaatttaacctttgatattgtccctcttAAGAT--G-GGTGACTTT-AT---GA--GCG-GA-GTG--CCTATTCA-C-GACTCAGGGTAC-G---ATTGCG--AATCGGGAGTTTAAAAT--CCGC-ATTCATTTTA-C-CTGTA-T-TTA-CAATAGA---TACA-GTA-------CCG--TTCTAAAA---------------TGCTA--TTCAAAAT--A--ATGCATT----A-----A--------A--AAAA-ATA------CA-TAGA--TC--A--TGC--ATCAAGC--AA-GA-AATATTAA-T-------------CAG-AA-TCAT--CGTCAG-AA--TTTGTTTCACAG---C--GCA--T-C----AT-GTAT-------T-TCA--GACATT-AAGCGG---TTTTCAACA----CT--CA------CA-----TA-----A---------T--------------TACATTG-ATGTCTGG-ACTACCC--AAGGTA--CCAAA-TGACAC-T-GCATATAT-c
gi|1 : gAAGAT--GAG-TGACTTT-ATC--GA--GCG-GA-GTgcgcgcaacaccctacagtacgtgccccgcatttgcactgacaaaaccaaccacaaatacttgtaggcgaatattttacccacaggttgtaaagcgttttgctagtgtatcgagattggatttttgcatgaagtaaattaggctccatctcggacacgtcaatgtggtactgtccattctgaagatgctctgcaacataagaatttgcttg
gi|11 : tttggcaaacaataagctttcttaatttcacgactcattgcgaaattggggagtttaaaattctcgctatgatttttaacattgttatgttacaatagatattacagtacggtttctaaaatgctatcttcaaaatacatgcaatgccaaatactataatataaaaatacatagagttctatacatcaaagcagatatttttaatgcagaaatcattcgtcataaatttgtttcaacgggcaagcattgctaatgtacatattaaagtgtttcccaaatacccccatatatgcaattacattggtgttggcagtacccaaggtaaccttaatgacactaggatataatgcgccgcagccaccgaacaagtacgtgatgctgggtggccgcatttgcattgactcaataccattccacagtaaaactatgtggtgaaatatgttttatcccacaagttgtaaacgagttttgtctttgttgtgtcgatattgtggaatccattttggcatgtgttcgtcattaagactatcgatacaatgtattattggtagaaatacgtaaggatcataatggcaaaaagactctttataatgtaagttttagaattaaatttcataccacccttatacagtgagaaaaaaaaattattttaaaaattacgtagcaaaatgtggcgtattcgaatccacaggtatgcatattgaattcatcatttaggacttgtcgctaattcatttttctcgtgaataaagtcgaattggggtcatttagttaaaattaaagtcacgtggtatggactttagaaatttatttccttttgataattgcggccaaaggttatatttacataaaagtaaagttttttgttcaaattagagtgggcaagtcgtcatattcttttatttttatctaaaacattttaactagacattggacatactctaccatatttctttcagtgtttagctaataaggagacttgacccacatctattttgccaaatattgtgcttggaaaagtaatatccaaatttatcttatttattattgtgcgtattaatttcgcgttaataccgtcttttaaatannnnnnnnnnnnnnnnnnnnnnnnnttttaaaatatgattttttcaatgtaagaaaagctttttttgaacactatggattgattgttgtaactagaatctaaattttctgtttcctggggagttttaattttaactttgatatttgtccctctgtgggaAAGAT--G-GGTGAACTTTATC--GA--GTG-GA-GTG-CCCc
gi|12 : actatgtttaagattcacctggtatggacttaaaaattttcttgataatatggcacaacttatatacaaaagatcagctttgtttcatagagtggattcaaagttcttatacgttttattttacaaaatattctttaacatgaaacatacaaatactatattttgacgtcagtttacagatggagacttgacccactactatgtgaaattgtgcttggaaaaataaatctgccttgttattttagtgcgtttttcgagtataacgtcattttaatgtgattttttcaatgttccttttacttgagacacaaaaaaagcttttaatgaacaccaaatatggattgattgttgtaacttagatttaaattttctgttttcttggagtttcattttactttgatattctgtcctctgtAAGAT--G-GGTGA-TTTTGGC--GA--AC---A-ATATGCCTATTCA-C-GATTCA------------TTGCGAAGA--GGGAGTTTAAAAT--CCGC-ATTGATTTTA-C-CTGTA-T-TTA-CAATAGA---TACA-GTAC------C-G--TTCTAAAA---------------TGCTA--TTCAAAAT--GT-ATGCATT----C-----A--------ACCAAAAAACAAT---ACA-TAGA--TC--A--TAC--ATCAAAG--CA-GA-A----TAT-CTAAT---------CAG-AA-TCA--TCGTCAG-AA--TTTGTTTCACGGG--CA-GCA--T-C----AT-GTACATATGTAT-TTCA-GACATT-AAGCGG---TTTTCAACA----CA--CA------CACACAATCATGTAA---------T--------------TACATTG-ATGTCTGG-ACTA--C--
gi|9 : agAAAT--G-G-TGACTTTTATCCGGA--GCG-GAAGTG--CCTATTCA-C-GACTC-GGGTACCGTTTATTGCG-AAATCGGGAGTTTAAAAT--CCAC-----ATTTTTAC-CTGTT-T-T-A-CAATAGA---TACA-GT--------C-G--TTCTAAAA--------------GTGCTA--TTCCAAAA--T--ATGCATT----T--------------A--A-AATA--------CA-TAGA--TC--A--TGC---TCAAAA-----AA-A----TAA----AT---------CA--A---TAT---GTCAG-AA--TTGTT---ACAGG--C--G-A--T-C----AT-GT-T-------T-TCC--GACATT-AAGCG----TTTTCAA-A----CT--CA------C------T------A---------T--------------T-CATTG-ATGTCTGG-AGTA--C--AAGGTA--CCAAA-TGA-ACTTAGCATATATGCAG-GT-GTTTGAAATT-GTT-CTCTT---AACTTTCC-TTCAAACTGCCGTTTACA--AAC---CAACACCCGT--TTC--ACGGGGAGGGCCCATAAATACTGT--TTACATTT-AT--CAGC--TAGCCGC-ATGTTCGAAT-AAG--TAC-TTG-TA--GT-C-T-C-ATTAA--A-C-A--C--A-TATT--ATTCGT-AC---C-TT--AGCA---TCAA---T--GCC---AAA---G------T-T-----TAT--A-----GGT-AT------GTTTCAGA---AA-A--TT-CAA--CAC-------------C----------AAAGAG-AAAA---------AA------------------AA-----------AC--GA-----CG-T-AGGAAAAAAT--G-GTATT-GAA--C-ACAGGTATA-CATTA-GTA-----TC-ATCA-AT------ATGA-----T-GTCGCTA--A-C-GAT-T--CGGCC----TATTC-TCTC-T-TGCA--G-ATAA---G--G--GAATT-------T----AG---CT--ATTTATAA-GTca
gi|2 : aagAGATTGG-G-TGACTTT-ATCA-GA--GCG-GA-GTG-CCCc
gi|1 : aagaagatggcgtgtttaatcgattgcgacgtgcctattcactgactcagggtactctgatttcgaaattcggagttttattctccgtcatgcatttactgtatttatcaataaatacatgtatcctatttgttctaaaatgccttactggttggtgtatttcaaaaaatacatccgcatgaaaaaaaagatacacactagatcttatgcgatcaagcaggaatactgtaattccatgaattcatatcgtcagtaatcttgtttcacaggtccgcatgcatggtatttcaggacattgaagcgacgtttttcaacactccgtcatgtaattacattgaatgtctggagtaatcctgattgcatagttggcttctatactttatcttgaagtaacttcctttagagtttttgaaatttgtttctcttgcaactttcctttcaatgccgtttacaacacacaccactcgtactctcacgggaggccctacttgttacattttattcactagccgtatgttgaatcagttaacttgtagtcgttcataagacatacatattttttcgtaagcttagcaaaataaaatgctcaaaaagatattatacactggtacgtttaaaataagatccataccaaccaaacgagagagaaaaaagagaaagaaaaaacacgatagggaaaatggtattcgaaacaggacagtatgcatttggatcaatccagctaagacgtcgcaaaaccgactcggctaggtcattatctttgcacgtataacatgggaatttttaagctatttaagtccctgcttggacttagaaattttcttgatatatggcgtgcaaaagttatatacaaatgtaagctttttttcatagagtggtcaagtctccatatctgtttatttataaatacattgttaacactgaaccattatcaatccggatattttacctcggttacaatggagactctgtaccgcactctattggaaatttgtgcttggtaaaagtaaatttgctgtatttctgtgcgtctttccgcgtacaaagtcatttttcaaattctggaattttttcatgtttcttttacttgctgcacacaagacaagttatttttgaacactatggtcctaattgtagttaatctagaatttaaaattttctgtttttctgggggagtttcaatttttaaaacttgaatatatttgtttcctcttgctTTCA-C-GACTCA------------TTGCGAAATTGGGGAGTTTAAAATTCTCGCTATGATTTTTAACATTGTTATGTTA-CAATAGATATTACA-GTA-------C-GGTTTCTAAAA---------------TGCTATCTTCAAAAT--AC-ATGCAAT----GCCAAAT--------ACTATAATATAAAAATACA-TAGAGTTCT-A--TAC--ATCAAAG--CA-GATATTTTTAA-T--GCA--------GA--AA-TCAT-TCGTCAT-AAATTTGTTTCAACGGG--CAAGCA--T-TGCTAAT-GTAC---------------ATATT-AAA-GT-GTTTCCCAA-ATACCCC--CATATATGC------A------A---------T--------------TACATTG-GTGT-TGGCAGTACCC--AAGGTAACCTTAA-TGACAC-TAGGATATActttg
gi|17 : tttggcaaacaataagctttcttaatTA--TTCAAAATGTA--TTGCATT----C-----TCAAAAACCA--AAAACACAT----ACA-TAGA--TC--ACTTAC--ATCAAAG--CACGA-A----TAT-TT-ATC--------AA--AA-TCA---CGTCAG-AA--TTTGCTTCACAGG--C--atgcgccgcagccaccgaacaagtacgtgatgctgggtggccgcatttgcattgactcaataccattccacagtaaaactatgtggtgaaatatgttttatcccacaagttgtaaacgagttttgtctttgttgtgtcgatattgtggaatccattttggcatgtgttcgtcattaagactatcgatacaatgtattattggtagaaatacgtaaggatcataatggcaaaaagactctttataatgtaagttttagaattaaatttcataccacccttatacagtgagaaaaaaaaattattttaaaaattacgtagcaaaatgtggcgtattcgaatccacaggtatgcatattgaattcatcatttaggacttgtcgctaattcatttttctcgtgaataaagtcgaattggggtcatttagttaaaattaaagtcacgtggtatggactttagaaatttatttccttttgataattgcggccaaaggttatatttacataaaagtaaagttttttgttcaaattagagtgggcaagtcgtcatattcttttatttttatctaaaacattttaactagacattggacatactctaccatatttctttcagtgtttagctaataaggagacttgacccacatctattttgccaaatattgtgcttggaaaagtaatatccaaatttatcttatttattattgtgcgtattaatttcgcgttaataccgtcttttaaatannnnnnnnnnnnnnnnnnnnnnnnnttttaaaatatgattttttcaatgtaagaaaagctttttttgaacactatggattgattgttgtaactagaatctaaattttctgtttcctggggagttttaattttaactttgatatttgtccctctgtgggaactccgctcgataaagtcactcatcttc
gi|5 : aaatgCG--T-C----AT---AT-------TATTCA-GACATT-A-GCTG-GTTTT-CAC-A----CT--CA------CAACAC-T------A---------TGTCAAATTAGATTGTAAATTG-A-GTCTGG-AGCACTC--GAAGTAC-CCAAA-TGAACC-TGGC-TATaggca
gi|6 : gagt-AAGCGG---TTTTCAACA----CT--CA------C------TTA----A---------T--------------TACATTG-ATGT-TGG-AGTA--CCCAAGGTA--CCAAAATGACAC-T-GCATATAG-CAGAGTTTTTTGAAATT-GT--CTCTTTC-AACTTTCCTTTCAA-CTGCCGTTTA-C--AAC---AAACACCCGTACTTC--ACGGAAA-GCCCCA--AT-ACT-TGTTTACATTT-ATTTCA--CTAAACCGC-ATGTTCGAATCAAGTT-ACTT-GT-A--GT-CGT-TCATTAA--AG--A--CTAA-TATT--ATTCGTAAA---A-TT--AGCA---T-AA---AA-GCC---AAA---AAAGA--TAT-----TATA-A-----TGG-AT------GTTT-AGAAT-AA-A--TT-CAT---GCC-----AT-----C----------AA---GAAAAA---------AA------------------AA-----------AC---A-----CG-T-AGGAAAAAATG-G-TAATTCGAC--C-ACAGGTATAACATTATGTA----TTC-ATCA-CT------AAGA--C--T-GTCGCTATTA-C-GAT-TCTCGGC-----TATTCATCTCGT-TGCACCG-ATAA---G--G--GAATT-------T--TAAG---CT--AGTTA-AA-GTC-ACCTGGCTTC-G-AC-TTAA-A-----A-T-TTTCT-G---AT--AA-TGCG----G-CAAAAG-TTAT-A--TGACAA--AA---------TA----T----T---TTT-----------AT----------TTTC---A---TAG-A-GTGGGTC--AA-----GTCTCCATTA--C-T-TTTATTT-ACA---AAA-CATT--T--A-C---ACA-TGAA-----------------------ATTT--------AC-TCAGTTTATCAAT--GGAG-CT-TG-ACCC--ACT----A---TGTGAAAT-TT-T-GCTTGGAAA---A--GTCAAA-TTTGC--TGTT-ATT-----T-T-GTG-GCGTTTA---TCG-GCGTGACGT--CATTTTC--AA----T--------T-TG--AATTTTT-T---CAATGTTC-TTTTA---------CTTGCTGC---ACACAG-AA---AA-G-TTA---TT-T-T-GA-ACAC----TAT--GGT-CTGA-T-TGT-TTT--AACTAGAATT-T--AAACTTT---TCTG-TTT-TCT-GGGGAAGTTTTCAATTTT--TAAC-TTTG---AT-----TT-TG--TCCC-TC-TGC--------TGGGCACT--CGCTCC-GAT-TAG-TCACC-CATCTTCTgcgcgcaacctccgggattttctaggtacgtgtattgacaaagccacacaattactgtgtaggtgaaattttaccagcaagttgcatgatgagttttgcttgtgtgtctagatggaattttgcatgtggttcgtcattaagaatgacaatattattgtaaaaagtttgcagtagaaactgccaaaagagttataattggcggttaagtttagaatagaattttataccaaccaaagagaaaaacaaaattagaaaatacgtcaggataattggtattgaaccacaggtataacatgttggatcatcattaggaacttgtcgttatagcgaatgcggccttttatccctaagataatacacgaattaccttgttatggacttagaaattttctggataatgcgggcaagaagttattagaaaaagagttttttcatcgagggtccaagtttccatatctttttattacaaaacattttacaaatgaacacaactaccatattttacttcagtttagcaatggagacttgcccactctatgcgaaatttggtgctggaaagtcaaattttactgttagttgtgcgttttttgcgttacgcatcattttaaatattgatttttttctaatgttcttgttacttgagcaacaagatataagctttctgttggaacactatggattgattgttttgcaactagaatttaatttctccgttttctggagagtatttcatttaacttgtgatagtgtccctttgtggcctttgctcga
gi|24 : -AAGTGG---TTTTCAATA----CC--CA------CATACA-TGCA---A---------T--------------TACATTG-GTGTCTGG-At
gi|7 : TTTTCAACA----CT--CA------C------T------AA--------T--------------TACATTG-ATGTCTGG-AGTA--CCCAAGGTA--CCAAA-TGACAC-T-GCATATAG-CAGAGTT-TTTGAAATT-GTT-CT-TT-C-AACTTTCCTTTCAACCTGCCGTTTA-ACAAAA---CACAACCCGTACTTC--ACGGAG--GCCCCATA----CT-TGTTTACATTT-AT--TCACTA-AACCGC-ATGTTCGAATCAG--TTACTT-GT-A--GTTCGT-CA-TTAA--GACTA--C--A-TATT--ATTCGTAAAA--C-TT--AGCA---T-AA---AAAGCC---AAA---AAGATA-T-T-----AATA-AT----GGT-AT------GTTT-AGAAT-AA-A--TT-CAT---GCC-----A------T----------CAAGA---AAA---------AA------------------AA-----------AC---A-----CG-T-AGGAAAAAATG-G--TATTCGAAACC-ACAGGTATA-CATTATGTA----TTC-ATCA-CT------AAGA--C--T-GTCGCTAT-A-C-GATCTC-CGGCT----TATTCATCTC-T-TGCAC-G-ATAA---G--G--GAATT-------T---TAG---CT--ATTTA-AA-GTC-ACCTGGCTT--GGAC-TTAG-A-----A-A-TTTTCTG---AT--AA-TGCG----G-CAAAAGTTTAT-A--T-ACAA--AA--------GTATATTT----T---TTT-----------T--------------C---AA--TAG-A-GTGGGTC--AA-----GTCTCCAT-A--C-T-TTTATTT-ACA---AAA-CATT--TT-A-C---ACA-TGAA-C-AT----------------------T------TAC-TCAGTTT--CAAT-GGAGA-CT-TG-ACCC--ACT-CCTA---TGTGAAAT-TT-T-GCTTGGAAA---A--GTCAAA-TTTGC--TGTT-ATT-----T-TTGTG-CGTTT-A---TCGCGTGTA-CGT--CATTTTC--AA----T--------T-TG--A--TTTT-TT--CAATGTTCCTTTTA---------CTTGC-G--C-ACACAAGAA---AA-G-TTA---TTGT-TTGA-ACAC----TAT--GGT-CTGA-T-TGT-TTT--AACTAGAATT-T--AAA-TTT---TCTG-TTT-TCT-GGGGAAGT-TTC-ATTTT--AA---CTTG---AT-----TT-TG--TCCC-TC-TG---------TGGGCACTC-CGCT-C-GAT-AAG-TCACC-CATCTTCT
gi|2 : cggT-TAGAGTT-TTTGAAATTTGTTTCTCTT-GCAACTTTCCTTTCAA--TGCCGTTTA-C--AACACACACCACTCGTA-CTCTCACGGG-A-GGCCC-TA----CT-TG-TTACATTTTAT--TCACT--AGCCG-TATGTT-GAATCA-GTTAACTT-GT-A--GT-CGTTCA--TAA--GAC-ATAC--A-TATTTT-TTCGTAAG---C-TT--AGCAAAAT-AAAA-T--GCTCAAAAA---GA-----TAT-----TATACACT---GGT-AC------GTTT-AAAAT-AAGA--TC-CAT---ACC-----AACCAAACGAGAGAGAAAAAAGAGAAAGA---------AA------------------AA-----------AC---A-----CGAT-AGGGAAAA-TG-G--TATTCGAA----ACAGG---A-CAGTATGCAT---TTGGATCA-ATCCAGCTAAGA--C----GTCGCAAA-A-CCGAC-TC--GGCTAGGTCATTA-TCT--T-TGCAC-GTATAACATG--G--GAATT-------TTTA-AG---CT--ATTTA-A--GTC--CCTG-CTT--GGAC-TTAG-A-----AAT-TTTCTTGAT-AT--AT-GGCGT---G-CAAAAG-TTAT-A--T-ACAA--AT--------GTAAGCTT----T---TTT-----------T--------------C---A---TAG-A-GTGG-TC--AA-----GTCTCCAT-AT-C-TGTTTATTT-ATA---AATACATTG-TT-AAC---AC--TGAA-CCAT--T--A-TCAATCCGG--ATATT-----TTACCTCGG-TTA-CAAT-GGAGA-CTCTGTACCG-CACT-C-TA---TTGGAAAT-TT-GTGCTTGGTAA---AA-GT--AAATTTGC--TGT--ATT-----TCT-GTGCGTCTT-T---CCGCGTACAAAGT--CATTTTTCAAA----T--------TCTGGAA--TTTT-T---TCATGTTTCTTTTA---------CTTGCTGC---ACACAA-GAC--AA-G-TTA---TT-T-TTGA-ACAC----TAT--GGT-CCTAAT-TGTAGTTA-ATCTAGAA-T-TTAAAA-TTT---TCTGTTTT-TCTGGGGG-AGT-TTCAATTTTTAAAAC--TTGAATAT----ATT-TGTTT-CC-TCTTGC--------TGGGCACTC-CGCT-CTGATAAAG-TCACCCAATCTtt
gi|4 : aagaagatggcgtgtttaatcgattgcgacgtgcctattcactgactcagggtactctgatttcgaaattcggagttttattctccgtcatgcatttactgtatttatcaataaatacatgtatcctatttgttctaaaatgccttactggttggtgtatttcaaaaaatacatccgcatgaaaaaaaagatacacactagatcttatgcgatcaagcaggaatactgtaattccatgaattcatatcgtcagtaatcttgtttcacaggtccgcatgcatggtatttcaggacattgaagcgacgtttttcaacactccgtcatgtaattacattgaatgtctggagtaatcctgattgcatagttggcttctatactttatcttgaagtaacttcctATTTTGCCATTGT-CG--CAATTAA--GACTA--C--A-TAATTAAAG-GTAAA---GATT--AGCA---T-AAAATT--GCC---AAA---A------T-TAAGAATATA-A-----TCT-GTAGACTAGTTT-A-AAT-AA-A--TT-CAT---ACC-----A------CC---------AAAGAGAAAAATATAATTAAAA------------------AA-----------AA--TA-----CG-T-AG---AAAATT-G-GTATTCGAA--CCACAGAGATA-CAT---GTACAGACTC-ATCA-TA------AAGA--CAAT-ATCGCTTC-A-------TC-TAGGC----TGTTTATCTC-TGTG-A--G-AAAT---GCTG--AAATA-------T--CAAGAAACT--ATTTA-AAAGTC-ACCTGTATT--GGAC-TTAA-A-----AAT-TTTCCTTTG-AA--AC-TGCG----G-CAAA----TCTGA--T-ACAA--AA--A----GGTAAGTTT----T---TT---------------------------C---A---TA--A-GTGGGTC--A------GTCTCCAT-A--AAT-TTTATTTTACA---AAA-CATT--TT-A-C---ATA-TGAA-C-ATACA--A-CTA--CC-A--ATATT------TAC-TCAGTTTA-CAA-TGGAGA-CT-TG---CC-CACT-C-TAT--TGCGAAAT-TG-T--CTTGGAAA---GGT-TC-AAATTTAC--T-TT-ATT-----T-T-G-G-CT-TT-A---TCGCG--TAACGT---A-TTTTCTAA----T--------A-TG--AT-TTTT-T---CAATGTTCCTTTTA---------CTGG-----T-ACACAA-GA---AA-GCTTT---TT-T-TCG--ACAC----TAT--G-----GATT-GGT-TT---AACTAGAA-T-C--TAA-TGT---TCCG-TTTGTAT-TAGG-AGATTTCAATTT----AACCTTTG---AT----A-T-TG--TCCC-TC-T----------TGGTCACTC-CGCT-C--ATAAAG-TCACA-CATCTTCctttg
gi|5 : aagatgggtgattttggcgaacaatatgcctttgcaacgactcatatgcgatcgggagtttaaaatccatttgatattacctgtatttacaatagatacggtaccgttcaaatatgctattcaaatattatgcattcacgccaaaaacacaatacatggtcatacaaatcaaaagctagagtagtcataataaggtccagaatcatcgtcaaatttgcttcacaggcagcgattcatgcatattatatttcagaattaagcgtgtttcaacacttgcacatgtacaatgtaatttacattggagtctggactatccaagtacaaaacaagtgggcatatatgcgcgcagcacttaaacagtacggctcgcatttgctattgacaaaaccaatcacaaaataattgtagggtgaaattaccacaagttgtaatgattttagctttgtgtgtcagagattgaaT-CGT-CA-TTAAGAATG-A--C--AATATT--ATT-GTAAAAAGT-TTGCAGTA---G-AAAC-T--GCC---AAAAGAG------T-T------ATA-ATTGGCGGTTAA------GTTT-AGAAT-AG-AATTT-TAT---ACC-----AAC----C----------AAAGAGAAAAA---------CA------------------AA-----------ATTAGAAAATACG-TCAGGATAA--TT-G-GTATT-GAA--CCACAGGTATAACATGTTGGA-----TC-ATCA-TT------AGGAACT--T-GTCGTTAT-AGC-GAA-TG-CGGCC----TTTTA-TCCC-T---AA--G-ATAA---------------------T--ACA----C---------GA-ATT-ACCTTG-TTATGGAC-TTAG-A-----AAT-TTTCTGG---AT--AA-TGCG----GGCAAGAAGTTAT----T-AGAA--AA--AG---AGT----------------------------TT----------TTTC---A---TCG-A-G--GGTCC-AA-----GTTTCCAT-AT-C-T-TTTTATT-ACA---AAA-CATT--TT-A-C---AAA-TGAA-C-AC--A--A-CTA--CCAT--ATTTT-----AC-T-TCAGTTTAGCAA-TGGAGA-CT-TG---CC-CACT-C-TA---TGCGAAAT-TTGGTGC-TGGAAA------GTCAAATTTTAC--TGTT-A-G-----T-T-GTG-CGTTT-T---TTGCGT-T-ACGCATCATTTT--AAA----TA-------T-TG--A--TTTT-TTTCTAATGTTCTTGTTA---------CTTGA-G--C-A-ACAA-GATATAA-G-CTT---TC-TGTTGGAACAC----TAT--GGA-TTGA-T-TGT-TTTGCAACTAGAA-T-T--TAA-TTTC--TCCG-TTT-TCT-GGAG-AGTATTTCATTT----AACTTGTG---AT----A-G-TG--TCCC-TT-TG---------T-GGC-CTT-TGCT-C-GA
gi|8 : gagtcgtcatattattcagacattagctggttttcacactcacaacactatgtcaaattagattgtaaattgagtctggagcactcgaagtacccaaatgaacctggctatgcgcgcaacctccgggattttctaggtacgtgtattgacaaagccacacaattactgtgtaggtgaaattttaccagcaagttgcatgatgagttttgcttgtgtgtctagatggaattttgcatgtggtTTTA-TTCGTAAA---C-TT--AGCA---T-AAAA-T--GCC---AAA---AAGA---TAT-----TATA-AT----GAT-AT------GTTT-AGAAT-AA-A--TT-CATACCACC-----A------A----------AGAGAGAAAAA---------AAGAAAAAAAAGAAAAAGAAAA-----------AC---A-----CG-T-AGGAAAAAGCG-G--TAATCGAA--CCACAGGTATG-CATTTTGGAC---T-C-ATCA-GT------AAGA--C--T-GTCGCTAT-A-C-GAT-CT-CGGC-----TATTCATCTC-T-TGCAC-G-ATAT---G--G--GAATT-------T--TAAG---CT--ATTTA-AA-GTC-AACTGGCTT--GGAC-TTAGAA-----A-T-TTTCTTG---AT--AA-TGCG----G-CAAAA-GTTAT-A--T-AC-A--AA--A----AGTAAG------------TT-----------TT----------TTTC---A---TAG-A-GTGGGTC--AA-----GTCTCCAT----T-T-TTTATTT-AC----AAAACATT--TT-A-C---ACA-TGAA-C-AT--AC-A-CTA--CCAT--ATTT-------TAC-TCAGTTTA-CAA-TGGAGATCT-TG-A-CC-CACT-T-TA---TGTGAAA--TT-TTGCTTGGAAA---A--GTC-AAATTTGC--TGTT-ATT-----T-C-GTG-CGTTT-T---TCGCGTAT-ACG--TCATGTTC--AA----T--------T-TG--AT-TTTT-T---CAATGT--CTTTTA---------CTTGC-G--C-ACACAAGAA---AA-G-TTA---TT-T-TTGA-ACAC----TAT--GGTGCT-ATTGTGT-T----AACTAGAATT-T--AAATTTT---TCTG-TTT-TCA-GGGG-AGT-TTCAATTTT--AA--CTTTG---AT----ATT-TG--TCCC-TC-TG---------TGGGC-CTCACGCT-C-GATAAAG-TCACC-CATCTTC
gi|1 : gCA---T-AA---T--GGC---AAA---AAGACTCT-T-----TATA-A-----TGT-AA------GTTTTAGAATTAA-A--TTTCATACCACCCTTATA------C----------AGTGAGAAAAA---------AA------------------AATTATTTTAAAAAT--TA-----CG-T-AGCAAAATGTG-GCGTATTCGAATCC-ACAGGTATG-CA-TATTGAA---TTC-ATCATTT------AGGA--CT-T-GTCGCTA-------AT-TC-----------ATT--TTTC-T-CGTG--A-ATAA---A--GTCGAATTGGGGTCAT--TTAG---TTAAAATTA-AA-GTC-ACGTGG--TATGGACTTTAG-AAATTTA-T-TTCCTTTTG-AT--AATTGCG----G-CCAAAGGTTAT-ATTT-ACAT--AA--A----AGTAAA--G----T---TTT-----------TT----------GTTC---AAATTAG-A-GTGGG-C--AA-----GTCGTCAT-ATTC-T-TTTATTT-TTATCTAAAACATT--TTAA-CTAGACATTGGA-C-AT--A--CTCTA--CCAT--ATTTCTTTCAGTGT-TTAGCTAA-TAA--GGAGA-CT-TG-ACCCACA-T-C-TATTTTGCCAAATATT-GTGCTTGGAAAAGTAATATCCAAATTTA---TCTT-ATTTATTAT-T-GTGCGTATT-AATTTCGCGT-TAATA--CCGTCTTTTAAA----TANNNNNNNN-NN--N--NNNN-N---NNNNNNNNNTTTTAAAATATGATTTT----TTCAATGTAAGAA---AA-G-CTT---TT-T-TTGA-ACAC----TAT--GGA-TTGA-T-TGT-TGT--AACTAGAA-TCT--AAA-TTT---TCTG-TTT-CCT-GGGG-AGT-TTTAATTTT--AA--CTTTG---AT----ATT-TG--TCCC-TC-TG---------TGGGAACTC-CGCT-C-GATAAAG-TCA-CTCATCTTC
gi|15 : tttggcaaacaataagctttcttaatttcacgactcattgcgaaattggggagtttaaaattctcgctatgatttttaacattgttatgttacaatagatattacagtacggtttctaaaatgctatcttcaaaatacatgcaatgccaaatactataatataaaaatacatagagttctatacatcaaagcagatatttttaatgcagaaatcattcgtcataaatttgtttcaacgggcaagcattgctaatgtacatattaaagtgtttcccaaatacccccatatatgcaattacattggtgttggcagtacccaaggtaaccttaatgacactaggatataatgcgccgcagccaccgaacaagtacgtgatgctgggtggccgcatttgcattgactcaataccattccacagtaaaactatgtggtgaaatatgttttatcccacaagttgtaaacgagttttgtctttgttgtgtcgatattgtggaatccattttggcatgtgttcgtcattaagactatcgatacaatgtattattggtagaaatacgtaaggat-----CG-T-AGCAAAA--TGTG-GTATTCGAAC-C-ACAGGTATG-CA-TATTGAA---TTC-ATCA-TT------AGGA--C--T-GTCGCTAT-T-C-GAT-CT-CGG-C----TATTCATCTC-G-TG-A--A-TTAA---A--GTCGAATT-------T--CAAG---TT--ATTTA-AA-GTC-ACC
gi|19 : TATTCAAA--CCACAGGTATG-CATATTGGAC---T-C-ACCA-TT-------TGG--C--TTGTCTCTAT-A-C-GAT-CT-CGG-C----TATTCATCTT-T-TGGA----ACAT---G--GTCGAA-T-------T--ACAAT--CT--ATTTA-AA-GTC-AC
gi|23 : TC-ATCA-CT------AAGA--C--T-GTCGCTAA-A-C-GAGATC-TG--C----TATTCATCTC-T-T
gi|13 : tggac--GAATT-------T--CAAG---CT--AATTA-AA-GTT-ACCTGGCGT--GGAC-AAAG-AC----A-T-TTTCTTG---AT--AA-TGCG----G-CAAACGAT-AT-A--T-ACAA--AA--A-----GTAAGGTT----T---GTT-----------T--------------C---A---TAG-A-GTGGGTC--AT-----GTCTCTAC-A--C-T-TTTATTT-AC----AAGACATT--TT-A-C---ACA-AGAA-C-AT--AC-A-CTAG-TCTAACATATT-----TTAC-TCAGTTCA-CAA-TGGTCA-CT-TG-A-CC-CACT-C-CA---TACGAAA--TT-TTGCTTTGAAA---G--GTC-AAATTTGC--TGTT-ATT-----T-T-GCG-CGTTT-T---TCACGT---GCG----ATTTTGAAGA---------------TG--A--TTTTAT---CA
gi|11 : T--GTTTA-AG-ATTCACCTGG--TATGGAC-TTAA-A-----AAT-TTTCTTG---AT--AA-TATG----G-CACAAC-TTAT-A--T-ACAA--AA--G----ATCAG------------CTT-----------TG----------TTTC---A---TAG-A-GTGGATTCAAA-----GTTCTTAT-A--CGT-TTTATTTTACA---AAA-TATTCTTT-A-----ACA-TGAAAC-AT--ACAA-ATA--CTAT--ATTTT-----G-ACGTCAGTTTA-CAGATGGAGA-CT-TG-ACCC--ACTAC-TA---TGTGAAAT-TG-T-GCTTGGAAA---AAT----AAATCTGCCTTGTT-ATT-----T-TAGTG-CGTTT-T---TCGAGTATAACGT--CATTTT---AA----T--------G-TG--A--TTTT-TT--CAATGTTCCTTTTA---------CTTGA-G----ACACAA-AA---AAAG-CTT---TT-A-ATGA-ACACCAAATAT--GGA-TTGATT--GT-TGTA-ACTTAGAT-T-T--AAA-TTT---TCTG-TTT-TCT-TGG--AGTTT-CA-TTTT--A---CTTTG---AT----ATTCTG--T-CC-TC-TG---------TGGGCACTC-CACT-C-GATAAAGTTCACC-CATCTTtataattttatttcacgt
gi|18 : actaTGGCGCA-GAAC-T----A-----A-CCTTTCCTATTCATCAAA-CACG----T-CAAAAG-TTGT-A--T-ATAA--AA--------GTAA--------T---TTT-----------TC----------TTTC---A---TAG-A-GTGGGTC--AA-----GTTTCCAT-A--
gi|5 : -AT--GA-TGCGTAACG-CAAAAA---AC-G--C-ACAACTAA--C----AGTAAAATT----TGACTTTCCAGCACCAAATT----------TCGC---A---TAG-A-GTGGG-C--AA-----GTCTCCAT-tgatattttcctcagtttaca
gi|21 : gagtcgtcatattattcagacattagctggttttcacactcacaacactatgtcaaattagattgtaaattgagtctggagcactcgaagtacccaaatgaacctggctatgcgcgcaacctccgggattttctaggtacgtgtattgacaaagccacacaattactgtgtaggtgaaattttaccagcaagttgcatgatgagttttgcttgtgtgtctagatggaattttgcatgtggttcgtcattaagaatgacaatattattgtaaaaagtttgcagtagaaactgccaaaagagttataattggcggttaagtttagaatagaattttataccaaccaaagagaaaaacaaaattagaaaatacgtcaggataattggtattgaaccacaggtataacatgttggatcatcattaggaacttgtcgttatagcgaatgcggccttttatccctaagataatacacgaattaccttgttatggacttagaaattttctggataatgcgggcaagaagttattagaaaaagagttttttcatcgagggtccaagtttccatatctttttattacaaaacattttacaaatgaacacaactaccatattttacttcagtttagcaT-A--T-ACAA--AA--A-----GTAAG------------TT-----------TT----------TTTC---A---TAG-A-------C--AAACAATGT-TTCGC-A--C-T-TTTATTT-AC----GAAACATT--Ttttaaatattgatttttttctaatgttcttgttacttgagcaacaagatataagctttctgttggaacactatggattgattgttttgcaactagaatttaatttctccgttttctggagagtatttcatttaacttgtgatagtgtccctttgtggcctttgctcga
gi|7 : -ACAA--AA--ATAACAGCAAATTTGAC-T---TTTCCAAGCAAAA-TT----------TCAC---A---TAGGA-GTGGGTC--AA-----GTCTCCAT-gta
gi|11 : cggttttcaacactcactaattacattgatgtctggagtacccaaggtaccaaatgacactgcatatagcagagtttttgaaattgttctttcaactttcctttcaacctgccgtttaacaaaacacaacccgtacttcacggaggccccatacttgtttacatttattcactaaaccgcatgttcgaatcagttacttgtagttcgtcattaagactacatattattcgtaaaacttagcataaaaagccaaaaagatattaataatggtatgtttagaataaattcatgccatcaagaaaaaaaaacacgtaggaaaaaatggtattcgaaaccacaggtatacattatgtattcatcactaagactgtcgctatacgatctccggcttattcatctcttgcacgataagggaattttagctatttaaagtcacctggcttggacttagaaattttctgataatgcggcaaaagtttatatacaaaagtatattttttttcaatagagtgggtcaagtctccatacttttatttacaaaacattttacacatgaacatttactcagtttca-ATAA--CA--A----GGCAGATTT----A---TTT-----------TTCCAAGCACAATTTC---ACA-TAGTA-GTGGGTC--AA-----GTCTCCAT-gcgtttatcgcgtgtacgtcattttcaatttgattttttcaatgttccttttacttgcgcacacaagaaaagttattgtttgaacactatggtctgattgttttaactagaatttaaattttctgttttctggggaagtttcattttaacttgattttgtccctctgtgggcactccgctcgataagtcacccatcttcttt
gi|4 : actatgtttaagattcacctggtatggacttaaaaattttcttgataatatggcacaacttatatacaaaagatcagctttgtttcatagagtggattcaaagttcttatacgttttattttacaaaatattctttaacatgaaacatacaaatactatattttgacgtcagtttacagCAA--AATAA----AGTAAATTTGAACC---TTT-----------CCAAGACAA---TTTCGCAA---TAG-A-GTGGG-C--AA-----GTCTCCAT-tttagtgcgtttttcgagtataacgtcattttaatgtgattttttcaatgttccttttacttgagacacaaaaaaagcttttaatgaacaccaaatatggattgattgttgtaacttagatttaaattttctgttttcttggagtttcattttactttgatattctgtcctctgtgggcactccactcgataaagttcacccatctt
gi|1 : aagatgggtgattttggcgaacaatatgcctttgcaacgactcatatgcgatcgggagtttaaaatccatttgatattacctgtatttacaatagatacggtaccgttcaaatatgctattcaaatattatgcattcacgccaaaaacacaatacatggtcatacaaatcaaaagctagagtagtcataataaggtccagaatcatcgtcaaatttgcttcacaggcagcgattcatgcatattatatttcagaattaagcgtgtttcaacacttgcacatgtacaatgtaatttacattggagtctggactatccaagtacaaaacaagtgggcatatatgcgcgcagcacttaaacagtacggctcgcatttgctattgacaaaaccaatcacaaaataattgtagggtgaaattaccacaagttgtaatgattttagctttgtgtgtcagagattgaaattttgccattgtcgcaattaagactacataattaaaggtaaagattagcataaaattgccaaaattaagaatataatctgtagactagtttaaataaattcataccaccaaagagaaaaatataattaaaaaaaatacgtagaaaattggtattcgaaccacagagatacatgtacagactcatcataaagacaatatcgcttcatctaggctgtttatctctgtgagaaatgctgaaatatcaagaaactatttaaaagtcacctgtattggacttaaaaattttcctttgaaactgcggcaaatctgatacaaaaaggtaagttttttcataagtgggtcagtctccataaattttattttacaaaacattttacatatgaacatacaactaccaatatttactcagtttaca---A---TAG-ATGTGGGTC--AA-----GTCTCCTT-A--T-T-gctttatcgcgtaacgtattttctaatatgattttttcaatgttccttttactggtacacaagaaagctttttttcgacactatggattggtttaactagaatctaatgttccgtttgtattaggagatttcaatttaacctttgatattgtccctcttggtcactccgctcataaagtcacacatcttc
gi|8 : tttggcaaacaataagctttcttaatttcacgactcattgcgaaattggggagtttaaaattctcgctatgatttttaacattgttatgttacaatagatattacagtacggtttctaaaatgctatcttcaaaatacatgcaatgccaaatactataatataaaaatacatagagttctatacatcaaagcagatatttttaatgcagaaatcattcgtcataaatttgtttcaacgggcaagcattgctaatgtacatattaaagtgtttcccaaatacccccatatatgcaattacattggtgttggcagtacccaaggtaaccttaatgacactaggatataatgcgccgcagccaccgaacaagtacgtgatgctgggtggccgcatttgcattgactcaataccattccacagtaaaactatgtggtgaaatatgttttatcccacaagttgtaaacgagttttgtctttgttgtgtcgatattgtggaatccattttggcatgtgttcgtcattaagactatcgatacaatgtattattggtagaaatacgtaaggatcataatggcaaaaagactctttataatgtaagttttagaattaaatttcataccacccttatacagtgagaaaaaaaaattattttaaaaattacgtagcaaaatgtggcgtattcgaatccacaggtatgcatattgaattcatcatttaggacttgtcgctaattcatttttctcgtgaataaagtcgaattggggtcatttagttaaaattaaagtcacgtggtatggactttagaaatttatttccttttgataattgcggccaaaggttatatttacataaaagtaaagttttttgttcaaattagagtgggcaagtcgtcatattcttttatttttatctaaaacattttaactagacattggacatactctaccatatttctttcagtgtttagctAAATGGAGA-CT-TG-A-CC-CACT-C-TA---TGAAAAAtttgccaaatattgtgcttggaaaagtaatatccaaatttatcttatttattattgtgcgtattaatttcgcgttaataccgtcttttaaatannnnnnnnnnnnnnnnnnnnnnnnnttttaaaatatgattttttcaatgtaagaaaagctttttttgaacactatggattgattgttgtaactagaatctaaattttctgtttcctggggagttttaattttaactttgatatttgtccctctgtgggaactccgctcgataaagtcactcatcttc
gi|7 : gtttattcgtaaacttagcataaaatgccaaaaagatattataatgatatgtttagaataaattcataccaccaaagagagaaaaaaagaaaaaaaagaaaaagaaaaacacgtaggaaaaagcggtaatcgaaccacaggtatgcattttggactcatcagtaagactgtcgctatacgatctcggctattcatctcttgcacgatatgggaattttaagctatttaaagtcaactggcttggacttagaaattttcttgataatgcggcaaaagttatatacaaaaagtaagttTGGAGA-CT-TG-A-CC-CACT-C-TA---T-TGAAAtttatttacaaaacattttacacatgaacatacactaccatattttactcagtttacaatggagatcttgacccactttatgtgaaattttgcttggaaaagtcaaatttgctgttatttcgtgcgtttttcgcgtatacgtcatgttcaatttgattttttcaatgtcttttacttgcgcacacaagaaaagttatttttgaacactatggtgctattgtgttaactagaatttaaatttttctgttttcaggggagtttcaattttaactttgatatttgtccctctgtgggcctcacgctcgataaagtcacccatcttc
gi|2 : cggttttcaacactcactaattacattgatgtctggagtacccaaggtaccaaatgacactgcatatagcagagtttttgaaattgttctttcaactttcctttcaacctgccgtttaacaaaacacaacccgtacttcacggaggccccatacttgtttacatttattcactaaaccgcatgttcgaatcagttacttgtagttcgtcattaagactacatattattcgtaaaacttagcataaaaagccaaaaagatattaataatggtatgtttagaataaattcatgccatcaagaaaaaaaaacacgtaggaaaaaatggtattcgaaaccacaggtatacattatgtattcatcactaagactgtcgctatacgatctccggcttattcatctcttgcacgataagggaattttagctatttaaagtcacctggcttggacttagaaattttctgataatgcggcaaaagtttatatacaaaagtatatttttTGGAGA-CT-TG-A--C-CACT-C-TA---TGAAAAAtacttttatttacaaaacattttacacatgaacatttactcagtttcaatggagacttgacccactcctatgtgaaattttgcttggaaaagtcaaatttgctgttatttttgtgcgtttatcgcgtgtacgtcattttcaatttgattttttcaatgttccttttacttgcgcacacaagaaaagttattgtttgaacactatggtctgattgttttaactagaatttaaattttctgttttctggggaagtttcattttaacttgattttgtccctctgtgggcactccgctcgataagtcacccatcttcttt
gi|18 : aagaagatggcgtgtttaatcgattgcgacgtgcctattcactgactcagggtactctgatttcgaaattcggagttttattctccgtcatgcatttactgtatttatcaataaatacatgtatcctatttgttctaaaatgccttactggttggtgtatttcaaaaaatacatccgcatgaaaaaaaagatacacactagatcttatgcgatcaagcaggaatactgtaattccatgaattcatatcgtcagtaatcttgtttcacaggtccgcatgcatggtatttcaggacattgaagcgacgtttttcaacactccgtcatgtaattacattgaatgtctggagtaatcctgattgcatagttggcttctatactttatcttgaagtaacttcctttagagtttttgaaatttgtttctcttgcaactttcctttcaatgccgtttacaacacacaccactcgtactctcacgggaggccctacttgttacattttattcactagccgtatgttgaatcagttaacttgtagtcgttcataagacatacatattttttcgtaagcttagcaaaataaaatgctcaaaaagatattatacactggtacgtttaaaataagatccataccaaccaaacgagagagaaaaaagagaaagaaaaaacacgatagggaaaatggtattcgaaacaggacagtatgcatttggatcaatccagctaagacgtcgcaaaaccgactcggctaggtcattatctttgcacgtataacatgggaatttttaagctatttaagtccctgcttggacttagaaattttcttgatatatggcgtgcaaaagttatatacaaatgtaagcttTGGAAA-CT-TG-A-CC-CACT-C-TA---TGtatctgtttatttataaatacattgttaacactgaaccattatcaatccggatattttacctcggttacaatggagactctgtaccgcactctattggaaatttgtgcttggtaaaagtaaatttgctgtatttctgtgcgtctttccgcgtacaaagtcatttttcaaattctggaattttttcatgtttcttttacttgctgcacacaagacaagttatttttgaacactatggtcctaattgtagttaatctagaatttaaaattttctgtttttctgggggagtttcaatttttaaaacttgaatatatttgtttcctcttgctgggcactccgctctgataaagtcacccaatctctttg
gi|14 : tggcgcagaactaacctttcctattcatcaaacacgtcaaaagttgtatataaaagtaatttttctttTTTGT--TGTTGATT-----T-T-TTA-ACGTT------CGTGTATA-----TGACATTTCAAAAGGAT--------T-T------TTTT-T---CAAAGTCTCTGTCA---------ATTAA-GCAC-ATCTAA-AA--------TTAAACCT-T-TTGAAA-AC----TATATGGA-TTGGTT--GT-TTCG-ATCAGGA----T--GCA-TTTGTTTCCA-TTT-TCT-TGAG-TGTTT-CAATTT----AACTTC-A---AT----ATA-TG--T-CCCTC-TG---------TGGGCTCTC-GGCT-C-AATAAtatgatattttcctcagtttaca
gi|20 : TT-T---TCGCGTATA-CGT--CATTTT--AAA----T--------A-TG--CC-TTTT-T---CAAGGTTCCTTTTA---------CTTGA-G--C-ACACAAGAG---AA-G-TTT---TT-A-ATGA-ACAT----TAT--GGA-TTGA-T-TGT-T
gi|10 : gtATTTT--AAACTCCCG---ATTCGCAAT-CG--T-AC-CC-TGAGTCGTGAATAGGCACTC-CGCT-C--ATAAAG-TCACC-CATCTTCg
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|16 ): CTTGTTTATTCGTAGCATAAAATTCCAGAAGAATTGAAAATGGTATGTTTTTTATGAGTAAGATTATCATAACCAACCAAGAAAAAAAATAGAATAAACAAAAAAAAAACAAACAGAAACACGT
Unaligned ( gi|22 ): AATTTCAAGCTATCCATTTAAGTCACCCGACGTGAACTTAGAAATTTTTTTTTTGGTGATAAT
Alignments
lowQualScore : 2222222 11 2 555555555555 11 111 1111111 444444444444444 11111 55555555555555555 111111 22222 11 11 11 666666666666666666 111 22 11 1111 3333333333 88888888888888888888888888888888888888888888 111 22 111 2222 111 11111111 11 1 111 1 11 333333333333 11111 1111111 222222222222 111111 555555555555555555555555555555 222222222222222222 3333333333 11111111111111 111 11111 1111 11 1111111111 22 11111111111 2222222222222 1111 1111 1 333333333333333333333 11 111 111 111 11111111 1111111 11 2222222222222222222222 11111111 22 1 11 22222222
lowQualScore : 6 2222222 99 00 7 5 5 888888888888 55 77 5 77 6 77 5 5 5 1 5 5 000 5 7777777 5 999999999999999 2 66 5 5 5 33333 5 22222222222222222 444444 1 77777 5 66 11 66 11 5 5 11 5 111111111111111111 111 5 33 5 888 5 8 5 6 5 33 66 5 0000 5 6666666666 5 4 888 3 55 2 55 55 33333333333333333333333333333333333333333333 3 3 8 444 66 5 5 5 5 44 5 0 88 8 8 8 0 11 666 0000 444 1 55 8 88 1 88888888 5 8 8 11 6 8 3 55 3 000 5 0 5 55 5 333333333333 4 4 5 4 66666 55 777 3333333 4 4 777777777777 4 4 000000 4 4 88888 777 8 4 4 8 55 55 4 333333333333333333333333333333 999999999999999999 2222222222 4 99999999999999 3 3 0 2 99 66 7 7777 7 111 1 33 44 44 0 99999 9999 9999 55555 1 3 3 3 8888 666 33 3 2222222222 555 33 555 2 2 2 55 77 3 999999 22222222222 44 44 3 3 3 3 7 3 3 3 3 44 3 0 6666666666666 1 1 999 77 88888 3 2222 3 3 3 0000 3 55 3 8 777 4 4 4 000000000000000000000 3 77 8 55 33 4 4 55 4 4 444 5 4 444 111 0 44 555 4 55 4 55555555 3 55 3 3 99999 3 3 3 3 4 6 555 1 1111111 3 6 33 3 9999999999999999999999 3 555 0 33333333 88 55 3 55 88 3 55 1 3 3 7777 55 88 55 3 99 4 4 2 4 55 8 55 4 1 4 4 4 11 3 66666666 777 11 4 4 1 4 8 3 4 4 4 1 5 5 5
lowQualScore : . ....... .. .. . . . ............ .. .. . .. . .. . . . . . . ... . ....... . ............... . .. . . . ..... . ................. ...... . ..... . .. .. .. .. . . .. . .................. ... . .. . ... . . . . . .. .. . .... . .......... . . ... . .. . .. .. ............................................ . . . ... .. . . . . .. . . .. . . . . .. ... .... ... . .. . .. . ........ . . . .. . . . .. . ... . . . .. . ............ . . . . ..... .. ... ....... . . ............ . . ...... . . ..... ... . . . . .. .. . .............................. .................. .......... . .............. . . . . .. .. . .... . ... . .. .. .. . ..... .... .... ..... . . . . .... ... .. . .......... ... .. ... . . . .. .. . ...... ........... .. .. . . . . . . . . . .. . . ............. . . ... .. ..... . .... . . . .... . .. . . ... . . . ..................... . .. . .. .. . . .. . . ... . . ... ... . .. ... . .. . ........ . .. . . ..... . . . . . . ... . ....... . . .. . ...................... . ... . ........ .. .. . .. .. . .. . . . .... .. .. .. . .. . . . . .. . .. . . . . . .. . ........ ... .. . . . . . . . . . . . . .
lowQualScore : 7 5555555 22 33 0 7 7 444444444444 99 99 7 44 6 99 7 7 7 7 7 7 000 7 1111111 7 000000000000000 5 99 0 0 0 44444 0 00000000000000000 444444 0 00000 0 99 99 99 99 0 0 99 0 000000000000000000 444 0 88 0 222 0 8 0 2 0 11 99 0 6666 0 6666666666 0 4 999 6 00 0 00 00 66666666666666666666666666666666666666666666 6 6 0 444 99 0 0 6 0 88 7 8 66 0 0 0 8 00 000 0000 000 0 88 0 88 0 22222222 6 0 0 00 0 0 2 77 5 222 7 0 0 66 0 888888888888 4 0 7 0 66666 55 000 0000000 0 0 111111111111 0 0 888888 0 0 77777 000 0 0 0 0 55 55 0 111111111111111111111111111111 555555555555555555 0000000000 0 33333333333333 6 6 5 3 00 55 3 7777 3 222 0 44 66 33 3 33333 9999 2222 88888 3 3 3 6 9999 444 88 1 1111111111 444 99 000 9 9 9 66 55 3 666666 22222222222 66 66 3 3 3 6 3 6 6 6 3 66 3 4 0000000000000 3 1 222 99 33333 3 2222 6 6 6 7777 3 00 6 0 000 0 0 0 999999999999999999999 2 33 0 55 55 0 0 55 0 0 888 0 0 666 000 5 88 222 0 55 0 55555555 6 00 6 6 11111 6 6 6 6 5 7 888 7 9999999 3 7 33 3 7777777777777777777777 3 888 7 22222222 33 00 6 00 66 6 00 0 6 6 7777 00 66 99 6 55 0 0 0 0 55 0 55 0 2 0 0 0 33 2 77777777 000 66 0 0 6 0 0 4 0 0 0 9 0 0 0
consensus : AAGATGG-GTGACTTT-A-TC--GA--GCGGN-GTG-CCTATTCA-C-GACTCAGGGTAC--T--ATTGCGAAA-TCGGGAGTTTAAAAT--CCG-C-ATTNATTTT--A-C-CTG-TAT-TTA-CAATAGA---TACA-GTACC------G-TTCTAAAA--------------GTGCTA--TT-C-AAA-AT--A-ATGC-ATT----CN--------A--AA------AANACAA----ACA-TAGA--TC--A--TGC--ATC-AAAGC-A--G-AATA-NT----ATN--------CA-G-AAT-CA--T-CGTCA-G-AAT-TTGTTTC-ACGGG-C-AGCA--T-C----ATG-TAT-------T-TTCAGACATT-AAGCG--GGTTTT-C--AACACT--CA--CA----T-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C-C-AAGGTA--CC-AAA-TGACAC-TGGCATATAT-CAGAGTT-TTT-GAAA-TTG-TTCTCTT-CAACTTTCCTTTCAA-C-TGCCGTTTA-A--AAC---CAACACCCGTACT-TCACGGGGA-GGCCCATAAA-C-TTGTTTACA-TTTATT-CGCT--AGACCGC-ATGTTCGAATCAAGTTTACTTTGT-AGT-CG-TCAATTAA-GA----C-------ACA-TAT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT--CACC-----A--C---------------AAAGAGA------------------AAAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G-GTATTCGAA-CCACAG----GTATG-CAT-TNTGGA-TTCATC--A-NTAAGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT-------TCAAG---CT--AT---TTA-A-A-GTCACCTGGCTTA-GGAC-TTAGAAATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--T-ACAAAAAAGT-AAG-TTT-TTTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AA-CAT--A--A-CTA--C---C--ATATTTT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG-ACCCCAC-T-C-TA---TGCGAAAT-TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GT-G-CGT-T---TTTCGCGT--ATA-ACG-TCA-TTTTCAA-A----T--------T-TG--A--TTTT-T---CAATGTTCCTTTT--------ACTTG-NG--C-ACAC--AAGA--A-AAG--TTNTT-TTTGA-ACAC----TAT--GGACTGA--TTGT-TTT--AA-C-TAGAA-T-T--AAA-TT--T-TCCG-TTT-TCTGGGG-AGT-TTTCAATTTT--AAACCTTTG---ATATT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACC-C-ATCTTCT
Reference ( family-1676 ) : AAGATGG-GTGACTTT-A-TC--GA--GCGGA-GTGNCCTATTCA-C-GACTCAGGGTAC-----ATTGCGAAAATCGGGAGTTTAAAAT--CCG-C-ATTNATTTT--A-C-CTG-TAT-TTA-CAATAGA---TACA-GTACC------G-TTCTAAAA--------------GTGCTA--TT-C-AAA-AT--A-ATGC-ATT----CN--------A--AA------AANACAA----ACA-TAGA--TC--A--TGC--ATC-AAAGC-A--G-AATA-NT----ATA--------CA-G-AAT-CAT-T-CGTCA-G-AAT-TGGTTTC-ACGGG-C-AGCA--T-C----ATG-TAT-------T-TTCAGACATT-AAGCG--GGTTTT-C--AACACT--CA--CA----T-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C-C-AAGGTA--CC-AAA-TGACAC-TGGCATATAT-CAGAGTT-TTT-GAAA-TTG-TTCTCTT-CAACTTTCCTTTCAA-C-TGCCGTTTA-N--AAC---CANCACCCGTACT-TCACGGGGA-GNCCCATAAA-C-TTGTTTACA-TTTATC-CGCT--AG-CCGC-ATGTTCGAATCAAGTTTACTTTGT-AGT-CG-TCAATTAA-GA----C-------ACA-TAT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT--CACC-----A--C---------------AAAGAGA------------------AAAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G-GTATTCGAA-CCACAG----GTATA-CAT-TATGNA-TTCATC--A-NTAAGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT-------TNNAG---CT--AT---TTA-A-A-GTCACCTGGCTTA-GGAC-TTAGAAATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--T-ACAAAAAAGT-AAGTTTT-TTTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AA-CAT--A--A-CTA--C---C--ATATTTT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG-ACCCCAC-T-C-TA---TGCGAAAT-TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GT-G-CNT-T---TTTCGCGT--ATA-ACG-TCA-TTTTCAA-A----T--------T-TG--A--TTTT-T---CAATGTTCCTTTT--------ACTTG-NG--C-ACAC--AAGA--A-AAG--TTNTT-TTTGA-ACAC----TAT--GGNCTGAT-TTGT-TTT--AA-C-TAGAA-T-T--AAA-TT--T-TCCG-TTT-TCTGGGG-AGT-TTTCAATTTT--AAACCTTTG---ATATT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACC-C-ATCTTCT
gi|1 : TTCA-C-GACTCA------------TTGCGAAATTGGGGAGTTTAAAATTCTCG-C-TATGATTTTTAA-CATTGTTATGTTA-CAATAGATATTACA-GTACG------GTTTCTAAAA---------------TGCTATCTT-C-AAA-AT--ACATGCAATG----CC--------A--AATACTATAATATAAAAATACA-TAGAGTTCT-A--TAC--ATC-AAAGC-A--G--ATA-TTTTTAATG--------CA-GAAAT-CAT-T-CGTCATA-AAT-TTGTTTCAACGGG-CAAGCA--T-TGCTAATG-TAC--------------ATATT-AAA-G--TGTTTC-CCAAATACC--CC--CA----TATATGCA----A-----------T--------------TACATTGG-TGT-TGGCAGTACC-C-AAGGTAACCT-TAA-TGACAC-TAGGATATA
gi|1 : tttggcaaacaataagctttcttaatGAATCCATTTTGGCATGT-GTT-CG-TCA-TTAA-GA----CTATCGATACAATGTATTA-TTGGTAGA---A-AT--A-C---GTAAGGATCATAAT-GG-CAAAA---A-GACTCT-TTA-TA-A-T----G--T-A---A-G---TTTTA-GAATTAA-A--T--TTCATACCACCCTTATA--C---------------AGTGAGA------------------AAAA----------A-AAATTATTTTAAAAATTACG-T-AGCAAAATGTG-GCGTATTCGAATCCACAG----GTATG-CAT-ATTGAA-TTCATC--ATTTAGGA--CT-TGTCGCTA------AT-TC-----------ATTTTTCTC-G-TG----A-ATAA---AGTCGAA-TTGGGGTCATTTAG---TTAAAA---TTA-A-A-GTCACGTGG--TATGGACTTTAGAAATTTATTTCCTT---T------TG--AT--A-ATT-GCG-GCCAA-AGG-TT-AT-ATTT-ACATAAAAGTAAAG--TT-TTTTGTTCAAATTAGAGTGGG-C--AA-----GTCGTCAT-ATTC-T-TTTA-TTT-TTATCTAAAACAT--T-TTAACTAGACATTG-GA-CAT--A--CTCTA--C---C--ATATTTC-T-T-TCAGTGTTTAGCTA-A-TAAGGAGA-CT-TG-A-CCCACAT-C-TATTTTGCCAAATATT-GTGCTTGG-AAAA--G-TAATATCC-AAA-TTTA---TCTT-A-TTTATTAT-T-GT-G-CGTATTAATTTCGCGTTAATA-CCG-TC---TTTTAA-A----TANNNNNNNN-NN--N--NNNN-N---NNNNNNNNNTTTTAAAATATGATTTT-TT--CAATGT--AAGA--A-AAG--CTTTT-TTTGA-ACAC----TAT--GGATTGA--TTGT-TGT--AA-C-TAGAA-TCT--AAA-TT--T-TCTG-TTT-CCTGGGG-AGT-TTT-AATTTT--AA--CTTTG---ATATT-TG-TCCCTC-TG-TGGGAACTC-CGCT-C-GATAAAG-TCACT-C-ATCTTCatgcgccgcagccaccgaacaagtacgtgatgctgggtggccgcatttgcattgactcaataccattccacagtaaaactatgtggtgaaatatgttttatcccacaagttgtaaacgagttttgtctttgttgtgtcgatattgtggaatccattttggcatgtgttcgtcattaagactatcgatacaatgtattattggtagaaatacgtaaggatcataatggcaaaaagactctttataatgtaagttttagaattaaatttcataccacccttatacagtgagaaaaaaaaattattttaaaaattacgtagcaaaatgtggcgtattcgaatccacaggtatgcatattgaattcatcatttaggacttgtcgctaattcatttttctcgtgaataaagtcgaattggggtcatttagttaaaattaaagtcacgtggtatggactttagaaatttatttccttttgataattgcggccaaaggttatatttacataaaagtaaagttttttgttcaaattagagtgggcaagtcgtcatattcttttatttttatctaaaacattttaactagacattggacatactctaccatatttctttcagtgtttagctaataaggagacttgacccacatctattttgccaaatattgtgcttggaaaagtaatatccaaatttatcttatttattattgtgcgtattaatttcgcgttaataccgtcttttaaatannnnnnnnnnnnnnnnnnnnnnnnnttttaaaatatgattttttcaatgtaagaaaagctttttttgaacactatggattgattgttgtaactagaatctaaattttctgtttcctggggagttttaattttaactttgatatttgtccctctgtgggaactccgctcgataaagtcactcatcttc
gi|10 : tttggcaaacaataagctttcttaatttcacgactcattgcgaaattggggagtttaaaattctcgctatgatttttaacattgttatgttacaatagatattacagtacggtttctaaaatgctatcttcaaaatacatgcaatgccaaatactataatataaaaatacatagagttctatacatcaaagcagatatttttaatgcagaaatcattcgtcataaatttgtttcaacgggcaagcattgctaatgtacatattaaagtgtttcccaaatacccccatatatgcaattacattggtgttggcagtacccaaggtaaccttaatgacactaggatataatgcgccgcagccaccgaacaagtacgtgatgctgggtggccgcatttgcattgactcaataccattccacagtaaaactatgtggtgaaatatgttttatcccacaagttgtaaacgagttttgtctttgttgtgtcgatattgtgAAGATGG-GTGACTTT-A-T---GA--GCGGA-GTG-CCTATTCA-C-GACTCAGGGTACG----ATTGCGAA--TCGGGAGTTTAAAAT--CCG-C-ATTCATTTT--A-C-CTG-TAT-TTA-CAATAGA---TACA-GTACC------G-TTCTAAAA---------------TGCTA--TT-C-AAA-AT--A-ATGC-ATT-----A--------A--AA------AAAAT------ACA-TAGA--TC--A--TGC--ATC--AAGC-AAGA-AATA-TT----AAT--------CA-G-AAT-CA--T-CGTCA-G-AAT-TTGTTTC-AC-AG-C--GCA--T-C----ATG-TA--------T-TTCAGACATT-AAGC---GGTTTT-C--AACACT--CA--CA----TA----------A-----------T--------------TACATTGA-TGTCTGG-ACTACC-C-AAGGTA--CC-AAA-TGACAC-T-GCATATAT-
gi|11 : gT--GT---TTA-AGA-TTCACCTGG--TATGGAC-TTAAAAATTT------TC---T------TG--AT--A-A-T-ATG-G-CAC-AAC-TT-AT-A--T-ACAAAAGA-T-CAG---C-TTTGTTTCA---TAGAGTGGATTCAAA-----GTTCTTAT-A--CGT-TTTATTTT-AC----AAAATATTCT-TT-A----ACA-TGAAA-CATACA--A-ATA--C---T--ATATTTT-GACGTCA--GTTTA--CAGA-T--GGAGA-CT-TG-A-CCCAC-TAC-TA---TGTGAAA--TT-GTGCTTGG-AAAA--A-T--------AAA-TCTGCCTTGTT-A-TT-----T-TAGT-G-CGT-T---TTTCGAGT--ATA-ACG-TCA-TTTT--A-A----T--------G-TG--AT-TTTT-T---CAATGTTCCTTTT--------ACTTG-AG----ACAC--AAAA--A-AAG--CTTTT-AATGA-ACACCAAATAT--GGATTGA--TTGT-TGT--AA-CTTAGAT-T-T--AAA-TT--T-TCTG-TTT-TCT-TGG-AGT-TTC--ATTTT--A---CTTTG---ATATTCTG-T-CCTC-TG-TGGGCACTC-CACT-C-GATAAAGTTCACC-C-ATCTTgcgcgcaacaccctacagtacgtgccccgcatttgcactgacaaaaccaaccacaaatacttgtaggcgaatattttacccacaggttgtaaagcgttttgctagtgtatcgagattggatttttgcatgaagtaaattaggctccatctcggacacgtcaatgtggtactgtccattctgaagatgctctgcaacataagaatttgcttg
gi|12 : actaAAGATGG-GTGATTTT-G-GC--GA--ACAAT-ATG-CCTATTCA-C-GATTCA------------TTGCGAAGA--GGGAGTTTAAAAT--CCG-C-ATTGATTTT--A-C-CTG-TAT-TTA-CAATAGA---TACA-GTACC------G-TTCTAAAA---------------TGCTA--TT-C-AAA-AT--GTATGC-ATT----CA--------ACCAA------AAAACAAT---ACA-TAGA--TC--A--TAC--ATC-AAAGC-A--G-AATATCT----AAT--------CA-G-AAT-CA--T-CGTCA-G-AAT-TTGTTTC-ACGGG-C-AGCA--T-C----ATG-TACATATGTAT-TTCAGACATT-AAGC---GGTTTT-C--AACACA--CA--CA----CACAATCATGTAA-----------T--------------TACATTGA-TGTCTGG-ACTA-C-C-A
gi|13 : ag--GAA-TT-------TCAAG---CT--AA---TTA-A-A-GTTACCTGGCGT--GGAC-AAAGACATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-ACG-AT-AT-A--T-ACAAAAA-GT-AAGGTTT-GTTT---CA---TAGAGTGGGTC--AT-----GTCTCTAC-A--C-T-TTTA-TTT-ACA---AGA-CAT--T-TT-AC---ACA-AG-AA-CAT--AC-A-CTAGTCTAAC--ATATTTT--AC-TCA--GTTCA--CA-A-T--GGTCA-CT-TG-ACCC-AC-T-C-CA---TACGAAAT-TT-T-GCTTTG-AAAG--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GC-G-CGT-T---TTTCACGT------GCG---A-TTTTGAAGA---------------TG--A--TTTTAT---CA
gi|14 : -TTTGT--TGTTGA-TT-----T-T-TT-AACGT-T------CGTGT--ATA--TG-ACA-TTT-CAA-AAGGAT--------T-T------TTTT-T---CAAAGTCTCTGTC--------AATTA-AG--C-ACATCTAAAATTA-AA-----CCT-TTTGA-AAAC----TATATGGATTGGT-T-GT-TTC--GA-T-CAGGA-T-G--CAT-TTGTT-TCCA-TTT-TCTTG---AGTGTTTCAATTT----AAC-TTCA---ATATA-TG-TCCCTC-TG-TGGGCTCTC-GGCT-C-AATAAtataattttatttcacgt
gi|15 : CG-T-AGCAAAA--TGTG-GTATTCGAA-CCACAG----GTATG-CAT-ATTGAA-TTCATC--A-TTAGGA--C--TGTCGCTAT-T-CGAT-CT-CGG-----CTATTCATCTC-G-TGAAT----TAA---AGTCGAA-TT-------TCAAG---TT--AT---TTA-A-A-GTCACC
gi|16 : -TGT-TTA-TTCGTA------------GC---ATAA-------AAT-TC-CAGAA---G-AA---T-TGA-AA-A-T----G-GT-A---T-GTTTTTT-ATGAGT-AAGA--TTAT-CAT--AACCA----A--C---------------CAAGAAA------------------AAAA----------ATAGA-----------AT-AAA-C-AAAAAAAAA
gi|17 : ctAA--------------ATG-TA--TT-C-AAA-ATGTA-TTGC-ATT----CTCAAAAACCA--AA------AACACAT----ACA-TAGA--TC--ACTTAC--ATC-AAAGC-AC-G-AATA-TTT---AT---------CA-A-AAT-CA----CGTCA-G-AAT-TTGCTTC-ACAGG-C-AGacaaacagaaacacgt
gi|18 : TGGCGCA-GAAC-T---AACCTT------TCCTAT------TC--ATCAA-A-C-ACG-T-CAA-AAG-TT-GT-A--T-ATAAAA--GT-AA---TT-TTTCTTTCA---TAGAGTGGGTC--AA-----GTTTCCAT-A--gca
gi|19 : TATTCAAA-CCACAG----GTATG-CAT-ATTGGA-CTCACC--A-TTTGGC--T--TGTCTCTAT-A-CGAT-CT-CGG-----CTATTCATCTT-T-TGGA----ACAT---GGTCGAA-TT-------ACAAT---CT--AT---TTA-A-A-GTCACtgatattttcctcagtttaca
gi|2 : AAGATGGCGTG--TTT-AATC--GATTGCGAC-GTG-CCTATTCA-CTGACTCAGGGTACTCTG-ATTTCGAAATTCGGAGTTTTATTCT--CCGTC-ATGCATTT---A-C--TG-TAT-TTATCAATAAA---TACATGTATCCTATTTG-TTCTAAAATGCCTTACTGGTTGGTG-TA--TTTC-AAA-A---A-ATAC-ATC----CGCATGAAA-A--AA------AAGATAC----ACACTAGA--TCTTA--TGCG-ATC-AA-GC-A--GGAATA-CT----GTAATTC----CATG-AATTCATAT-CGTCA-GTAATCTTGTTTC-ACAGGTC-CGCA--TGC----ATGGTAT-------T-TCAGGACATTGAAGCGACGTTTTT-C--AACACT--CCGTCA----TGTA--------A-----------T--------------TACATTGAATGTCTGG-AGTA-
gi|2 : aagT-TAGAGTT-TTT-GAAATTTGTTTCTCTTGCAACTTTCCTTTCAA---TGCCGTTTA-C--AACACACACCACTCGTACTCTCAC-GGGA-GGCCC-T--A-C-TTG-TTACATTTTATT-CACT--AG-CCGT-ATGTT-GAATC-AGTTAAC-TTGT-AGT-CGTTCA--TAA-GA----CAT-----ACA-TAT-TTT-TTCGTAAG---C-TT--AGCAAAATAA-------AAT-GCTCAAAA---A-GA---TATTA-TACACT----G-GT-A---C-G---TTT-A-AAAT-AAGA--T--C-CAT---ACCA----A--CCAAACGAGAGAGAAAAAAGAGA------------------AAGA----------A-AAA-----------AC-ACGAT-AGG-GAAAAT--G-GTATTCGAA---ACAGGACAGTATG-CAT-T-TGGA-TCAATCCAG-CTAAGA--C---GTCGCAAA-ACCGAC-T--CGGCTAGGTCATT-ATCT--T-TGCAC-GTATAACATGG--GAATTT-------TTAAG---CT--AT---TT--A-A-GTC-CCT-GCTT--GGAC-TTAGAAATTT------TC---T------TG--AT--ATA-TGGCGTG-CAA-AAG-TT-AT-A--T-AC--AAATGT-AAG---C-TTTTTTTCA---TAGAGT-GGTC--AA-----GTCTCCAT-AT-C-TGTTTA-TTT-ATA---AATACAT--TGTTAAC---AC--TG-AACCAT--T--A-TCAATC---CGGATATTTT-ACC-TCG--G-TTA--CA-A-T--GGAGA-CTCTGTACCGCAC-T-C-TA---TTGGAAAT-TT-GTGCTTGGTAAAA--G-T--------AAA-TTTGC--TG-T-A-TT-----TCT-GT-G-CGTCT---TTCCGCGT--ACA-AAG-TCATTTTTCAA-A----T--------TCTGGAA--TTTT-T---TCATGTTTCTTTT--------ACTTGCTG--C-ACAC--AAGA--C-AAG--TTATT-TTTGA-ACAC----TAT--GGTCCTAA-TTGTAGTT--AATC-TAGAA-T-TTAAAA-TT--T-TCTGTTTT-TCTGGGG-GAG-TTTCAATTTTTAAAAC--TTGAATATATT-TGTTTCCTCTTGCTGGGCACTC-CGCT-CTGATAAAG-TCACC-CAATCTatcctgattgcatagttggcttctatactttatcttgaagtaacttcctttagagtttttgaaatttgtttctcttgcaactttcctttcaatgccgtttacaacacacaccactcgtactctcacgggaggccctacttgttacattttattcactagccgtatgttgaatcagttaacttgtagtcgttcataagacatacatattttttcgtaagcttagcaaaataaaatgctcaaaaagatattatacactggtacgtttaaaataagatccataccaaccaaacgagagagaaaaaagagaaagaaaaaacacgatagggaaaatggtattcgaaacaggacagtatgcatttggatcaatccagctaagacgtcgcaaaaccgactcggctaggtcattatctttgcacgtataacatgggaatttttaagctatttaagtccctgcttggacttagaaattttcttgatatatggcgtgcaaaagttatatacaaatgtaagctttttttcatagagtggtcaagtctccatatctgtttatttataaatacattgttaacactgaaccattatcaatccggatattttacctcggttacaatggagactctgtaccgcactctattggaaatttgtgcttggtaaaagtaaatttgctgtatttctgtgcgtctttccgcgtacaaagtcatttttcaaattctggaattttttcatgtttcttttacttgctgcacacaagacaagttatttttgaacactatggtcctaattgtagttaatctagaatttaaaattttctgtttttctgggggagtttcaatttttaaaacttgaatatatttgtttcctcttgctgggcactccgctctgataaagtcacccaatctctttg
gi|20 : aagaagatggcgtgtttaatcgattgcgacgtgcctattcactgactcagggtactctgatttcgaaattcggagttttattctccgtcatgcatttactgtatttatcaataaatacatgtatcctatttgttctaaaatgccttactggttggtgtatttcaaaaaatacatccgcatgaaaaaaaagatacacactagatcttatgcgatcaagcaggaatactgtaattccatgaattcatatcgtcagtaatcttgtttcacaggtccgcatgcatggtatttcaggacattgaagcgacgtttttcaacactccgtcatgtaattacattgaatgtctggagtaatcctgattgcatagttggcttctatactttatcttgaagtaacttcctT-T---TTTCGCGT--ATA--CG-TCA-TTTT-AA-A----T--------A-TG--CC-TTTT-T---CAAGGTTCCTTTT--------ACTTG-AG--C-ACAC--AAGA--G-AAG--TTTTT-AATGA-ACAT----TAT--GGATTGA--TTGT-Tctttg
gi|21 : gT-A--T-ACAAAA-AGT-AAG-----TTTTTTTCA---TAGA------C--AAACAATGT-TTCGC-A--C-T-TTTA-TTT-AC----GAAACAT--T-Tg
gi|22 : AA-TT-------TCAAG---CT--ATCCATTT-A-A-GTCACCCGACGT--GAAC-TTAGAAATTT------TT---TTTTTGGTG--AT--A-A-T-gta
gi|23 : TGGA-CTCATC--A-CTAAGA--C--TGTCGCTAA-A-CGAGATC-TG------CTATTCATCTC-T-T
gi|24 : --GGTTTT-C--AATACC--CA--CA----T-----------ACATGCAA----T--------------TACATTGG-TGTCTGG-A
gi|3 : aagtAAGATGG--TGACTTTTA-TC--GA--GCGGA-GTGGCCTATTCA-C-AACTCAGGGTACCGTT-ATTGCGGAAATCGGGAGTTTAAAAT--CCA-CCATTCATTTT--AAC-CTG-TTT-TTA-CAATAGA---TACA-GTAC-------G-TTCTAAAAAG------------GTGCTA--TT-C-CAA-AT--A-ATGC-ATT----TT--------A--AT------AATATAA----ACA-TAGA--TC--A--TGC--ATC-AAAAC-A--G-AATA-AC----ATA--------CA---AAT-CAT-T-CGTCA-G-AAT-TGTTTTC-ACAGG-C--GCA--T-C----ATG-TAT-------T-TTC-GACATT-AAGCG--GGTTTTTC--AA-ACT--CA--C-----T-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C---AAGGTA--CC-AAA-TGACAC-TAGCATATAT-CAGAGTGGTTT-GAAA-TTG-TTCTCTT-AAACTTTCCTTTCAAAC-TGCCGTTTA-A--AAC---CAACACCCGTA-T-TCACGGGGA-GGCCCATAAAAC-TT--TTACA-TTTATC-AGCTTTAG-CCGCTATGTTCGAATCAAGTTTACTTTGTTAGT-CG-TCAATTAA-AG----C-------ACA-TAT-TTAATTCGTAAA---C-TT--AGC---ATAA---------T-GC-CAAAG----------T-TTA-TA-A------G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT--CACC-----A--C---------------AAAGAGA------------------AAAA----------A-AAA-----------ACGACG-T-AGGAAAAAATG-G-GTATTCGAA-C-ACAG----GTATA-CAT-TATGTACTTCATC--A-ATATGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTC-TCTC-T-TGCA--G-ATAA---GG--GAA-TT-------TACAG---CT--AT---TTA-A-A-GTTACCTGGCTTA-GGAC-TTAGAA-TTT------TC---T------TGTTAT--A-A-T-GCG-G-CAA-AAGGTT-AT-A--T-ACAAAAAAGT-AAATTTTTTTTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AA-CAT--A--A-CTA--C---C--TGATTTTATAC-TCA--GCTTA--CA-ATT--GGAAA-CT-TG-ACCCCAC-T-C-TA---TGTGAAAT-TT-TTGCTTGG-AAAAATG-T------CAAAA-TTTGC--TGTT-A-TT-----T-T-GT-G-ATA-T---TATCGCGT--ATA-ACGTTCATTTTTCAA-A----T--------T-TG--A--TTTT-T---CAATGTTCCTTTT--------ACTTG-CGCTC-ACAC--AA-A--A-AAG--TTATT-TTTGACACAC----TAT--GGTCTGAT-TTGT-TTTA-AA-C-TGGAA-T-T--AAA-TT--T-TCTG-TTT-TCTGGGG-AGT-ATACAATTTT--AAACTTTTG---ATATT-TG-T-CCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACCTC-ATCTTCT
gi|4 : AAGATGG-GTGATTTT-G-GC--GA--ACAAT-ATGCCTT-TGCAAC-GACTCA---TA--------TGCGA---TCGGGAGTTTAAAAT--CCA-T--TTGATATT--A-C-CTG-TAT-TTA-CAATAGA---TACG-GTACC------G-TTC-AAAT--------------ATGCTA--TT-C-AAATAT--T-ATGC-ATTCACGCC--------A--AA------AACACAAT---ACA-T-GG--TC--A--TACAAATCAAAAGCTA--G-AGTA-GTC---ATAATAAGGTCCA-G-AAT-CA--T-CGTCA---AAT-TTGCTTC-ACAGG-C-AGCGATT-C----ATG-CATATTATA-T-TTCAGA-ATT-AAGCG--TG-TTT-C--AACACTTGCA--CA----T-----------GTACAATGTAATT--------------TACATTGG-AGTCTGG-ACTA-T-C-CAAGTA--CA-AAA-CAA-GT-GGGCATATAT-
gi|4 : GT-CG--CAATTAA-GA----CT------ACA-TAA-TTA-AAGGTAAA---GATT--AGC---ATAA-------AATTGC-CAAAATTAA-GA----AT-A-TA-A-T----CTGT-AGACTAG---TTT-A--AAT-AA-A--T--T-CAT---ACC-----A--CC--------------AAAGAGA------------------AAAATATAATTAAAA-AAA-----------AT-ACG-T-AG---AAAATT-G-GTATTCGAA-CCACAG----AGATA-CATGTACAGA-CTCATC--A-TAAAGA--CAATATCGCTTC-A------TC-TAGG----CTGTTTATCTC-TGTGAGA-A-ATGC---TG--AAA-TA-------TCAAGAAACT--AT---TTA-A-AAGTCACCTGTATT--GGAC-TTAAAAATTT------TCCT-T------TG--AA--A-C-T-GCG-G-CAA-A----T-CTGA--T-ACAAAAAGGT-AAGTTTT-TT-----CA---TA-AGTGGGTC--A------GTCTCCAT-A--AAT-TTTA-TTTTACA---AAA-CAT--T-TT-AC---ATA-TG-AA-CAT--ACAA-CTA--C---C--A-ATATT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG---CCCAC-T-C-TAT--TGCGAAAT-TG-T--CTTGG-AAAG--GTT------C-AAA-TTTAC--T-TT-A-TT-----T-T-G--G-C-T-T---TATCGCG----TA-ACG-T-A-TTTTCTA-A----T--------A-TG--AT-TTTT-T---CAATGTTCCTTTT--------ACT---GG--T-ACAC--AAG---A-AAG--CTTTT-TTTCG-ACAC----TAT--GGA------TTGG-TTT--AA-C-TAGAA-T-C--TAA-TG--T-TCCG-TTTGTATTAGG-AGA-TTTCAATTT----AACCTTTG---ATA-T-TG-TCCCTC-T--TGGTCACTC-CGCT-C--ATAAAG-TCACA-C-ATCTTCgcgcgcagcacttaaacagtacggctcgcatttgctattgacaaaaccaatcacaaaataattgtagggtgaaattaccacaagttgtaatgattttagctttgtgtgtcagagattgaaattttgccattgtcgcaattaagactacataattaaaggtaaagattagcataaaattgccaaaattaagaatataatctgtagactagtttaaataaattcataccaccaaagagaaaaatataattaaaaaaaatacgtagaaaattggtattcgaaccacagagatacatgtacagactcatcataaagacaatatcgcttcatctaggctgtttatctctgtgagaaatgctgaaatatcaagaaactatttaaaagtcacctgtattggacttaaaaattttcctttgaaactgcggcaaatctgatacaaaaaggtaagttttttcataagtgggtcagtctccataaattttattttacaaaacattttacatatgaacatacaactaccaatatttactcagtttacaatggagacttgcccactctattgcgaaattgtcttggaaaggttcaaatttactttattttggctttatcgcgtaacgtattttctaatatgattttttcaatgttccttttactggtacacaagaaagctttttttcgacactatggattggtttaactagaatctaatgttccgtttgtattaggagatttcaatttaacctttgatattgtccctcttggtcactccgctcataaagtcacacatcttc
gi|5 : aagatgggtgattttggcgaacaatatgcctttgcaacgactcatatgcgatcgggagtttaaaatccatttgatattacctgtatttacaatagatacggtaccgttcaaatatgctattcaaatattatgcattcacgccaaaaacacaatacatggtcatacaaatcaaaagctagagtagtcataataaggtccagaatcatcgtcaaatttgcttcacaggcagcgattcatgcatattatatttcagaattaagcgtgtttcaacacttgcacatgtacaatgtaatttacattggagtctggactatccaagtacaaaacaagtgggcatatatgcgcgcagcacttaaacagtacggctcgcatttgctattgacaaaaccaatcacaaaataattgtagggtgaaattaccacaagttgtaatgattttagctttgtgtgtcagagattgaaattttgccattCG--T-C----AT---AT-------TATTCAGACATT-A-GCT--GGTTTT-C--A-CACT--CA--CAACACT-----------A-----------TGTCAAATTAGATTGTAAATTGA--GTCTGG-AGCA-CTC-GAAGTA--CCCAAA-TGAACC-TGGC-TAT
gi|5 : gagtTGT-GGTTCG-TCA-TTAA-GAATGAC-------A-A-TAT-T-A-TT-GTAAAAAGT-TTGCAGT---AGAA-------ACT-GC-CAAAA-----GA----GTTA-TA-A-TTGGCG-GTTA---A-G---TTT-A-GAAT-AG-AATT--T-TAT---ACC-----AACC---------------AAAGAGA------------------AAAACAAAATTA--G-AAA-----------AT-ACG-TCAGGATAA--TT-G-GTATT-GAA-CCACAG----GTATAACAT-GTTGGA-T-CATC--A-TTAGGAACT--TGTCGTTAT-AGCGAA-TG-CGGC----CT-TTTATCCC-T----AA-G-ATAA--------------------TACA----C------------G-A-ATTACCTTG-TTATGGAC-TTAGAAATTT------TC---T------GG--AT--A-A-T-GCG-GGCAAGAAG-TT-AT----T-A-GAAAAAG---AGTTTT-TT-----CA---TCGAG--GGTCC-AA-----GTTTCCAT-AT-C-T-TTTT-ATT-ACA---AAA-CAT--T-TT-AC---AAA-TG-AA-CAC--A--A-CTA--C---C--ATA-TTT-TACTTCA--GTTTAG-CA-A-T--GGAGA-CT-TG---CCCAC-T-C-TA---TGCGAAAT-TTGGTGCT--G-GAAA--G-T------C-AAATTTTAC--TGTT-A--G-----T-T-GT-G-CGT-T---TTTTGCGT---TACGCA-TCA-TTTT-AA-A----TA-------T-TG--A--TTTT-TTTCTAATGTTCTTGTT--------ACTTG-AG--C-A-AC--AAGAT-ATAAGCTTTCTG-TTGGA-ACAC----TAT--GGATTGA--TTGT-TTTGCAA-C-TAGAA-T-T--TAA-TT--TCTCCG-TTT-TCTGGAG-AGTATTTC-ATTT----AACTTGTG---ATA-G-TG-TCCCTT-TG-T-GGC-CTT-TGCT-C-GAgcgcgcaacctccgggattttctaggtacgtgtattgacaaagccacacaattactgtgtaggtgaaattttaccagcaagttgcatgatgagttttgcttgtgtgtctagatggaattttgcatgtggttcgtcattaagaatgacaatattattgtaaaaagtttgcagtagaaactgccaaaagagttataattggcggttaagtttagaatagaattttataccaaccaaagagaaaaacaaaattagaaaatacgtcaggataattggtattgaaccacaggtataacatgttggatcatcattaggaacttgtcgttatagcgaatgcggccttttatccctaagataatacacgaattaccttgttatggacttagaaattttctggataatgcgggcaagaagttattagaaaaagagttttttcatcgagggtccaagtttccatatctttttattacaaaacattttacaaatgaacacaactaccatattttacttcagtttagcaatggagacttgcccactctatgcgaaatttggtgctggaaagtcaaattttactgttagttgtgcgttttttgcgttacgcatcattttaaatattgatttttttctaatgttcttgttacttgagcaacaagatataagctttctgttggaacactatggattgattgttttgcaactagaatttaatttctccgttttctggagagtatttcatttaacttgtgatagtgtccctttgtggcctttgctcga
gi|6 : gagtcgtcatattattcagacattagctggttttcacactcacaacactatgtcaaattagattgtaaattgagtctggagcactcgaagtacccaaatgaacctggctatgcgcgcaacctccgggattttctaggtacgtgtattgacaaagccacacaattactgtgtaggtgaaattttaccagcaagttgcatgatgagttttgcttgtgtgtctagatggaattttgca-AAGCG--G-TTTT-C--AACACT--CA--CT----T-----------AA----------T--------------TACATTGA-TGT-TGG-AGTA-C-CCAAGGTA--CC-AAAATGACAC-TG-CATATAG-CAGAGTT-TTTTGAAA-TTG-T-CTCTTTCAACTTTCCTTTCAA-C-TGCCGTTTA-C--AAC---AAACACCCGTACT-TCACGGAAA-GCCCCA-ATA-C-TTGTTTACA-TTTATTTCACT--AAACCGC-ATGTTCGAATCAAGTT-ACTT-GT-AGT-CG-TTCATTAAAGA----C-------TAA-TAT-T-A-TTCGTAAA---A-TT--AGC---ATAA-------AA--GC-CAAAA---AAGA---TATTA-TA-A-T----G-G--A---T-G---TTT-A-GAAT-AA-A--T--T-CATGCCATC-----A----------------------AGA------------------AAAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G-TAATTCGA--CCACAG----GTATAACAT-TATGTA-TTCATC--A-CTAAGA--C--TGTCGCTATTA-CGAT-TCTCGGC-----TATTCATCTCGT-TGCACCG-ATAA---GG--GAA-TT-------TTAAG---CT--AG---TTA-A-A-GTCACCTGGCTTC-G-AC-TTA-AAATTT------TC---T-------G--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--TGACAAAA---T-A---TTT-TTATTTTCA---TAGAGTGGGTC--AA-----GTCTCCATTA--C-T-TTTA-TTT-ACA---AAA-CAT--T-T--AC---ACA-TG-AA-------------------------ATTT---AC-TCA--GTTTAT-CA-A-T--GGAG--CT-TG-ACCC-AC-T----A---TGTGAAAT-TT-T-GCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GTGG-CGT-T---TATCG-GC--GTG-ACG-TCA-TTTTC-A-A----T--------T-TG--AATTTTT-T---CAATGTT-CTTTT--------ACTTGCTG--C-ACAC---AGA--A-AAG--TTA-T-TTTGA-ACAC----TAT--GGTCTGA--TTGT-TTT--AA-C-TAGAATT-T--AAACTT--T-TCTG-TTT-TCTGGGGAAGT-TTTCAATTTT--TAA-CTTTG---AT-TT-TG-TCCCTC-TGCTGGGCACT--CGCTCC-GAT-TAG-TCACC-C-ATCTTCT
gi|7 : --GGTTTT-C--AACACT--CA--CT----A-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C-CCAAGGTA--CC-AAA-TGACAC-TG-CATATAG-CAGAGTT-TTT-GAAA-TTG-TTCT-TT-CAACTTTCCTTTCAA-CCTGCCGTTTA-ACAAAA---CACAACCCGTACT-TCACGGAG--GCCCCATA---C-TTGTTTACA-TTTATT-CACT--AAACCGC-ATGTTCGAATCAG--TTACTT-GT-AGTTCG-TCA-TTAA-GA----CT------ACA-TAT-T-A-TTCGTAAAA--C-TT--AGC---ATAA-------AAA-GC-CAAAA---A-GA---TATTAATA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT---GCC-----A--T---------------CAAGA---------------------AAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G--TATTCGAAACCACAG----GTATA-CAT-TATGTA-TTCATC--A-CTAAGA--C--TGTCGCTAT-A-CGATCTC-CGGC----TTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT-------TT-AG---CT--AT---TTA-A-A-GTCACCTGGCTT--GGAC-TTAGAAATTT------TC---T-------G--AT--A-A-T-GCG-G-CAA-AAG-TTTAT-A--T-ACAAAA--GT-A---TAT-TTTTTTTCAA--TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAA-CAT--T-TT-AC---ACA-TG-AA-CAT-------------------------T-TAC-TCA--GTTT---CA-A-T--GGAGA-CT-TG-ACCC-AC-T-CCTA---TGTGAAAT-TT-T-GCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-ATTT-----T-T-GT-G-CGT-T---TATCGCGT--GT--ACG-TCA-TTTTC-A-A----T--------T-TG--AT-TTTT-T---CAATGTTCCTTTT--------ACTTG-CG--C-ACAC--AAGA--A-AAG--TTATTGTTTGA-ACAC----TAT--GGTCTGA--TTGT-TTT--AA-C-TAGAATT-T--AAA-TT--T-TCTG-TTT-TCTGGGG-AAG-TTTC-ATTTT--AA---CTTG---AT-TT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GAT-AAG-TCACC-C-ATCTTCTt
gi|8 : cT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-AT-A---T-G---TTT-A-GAAT-AA-A--T--T-CATACCACC-----A--A---------------AGAGAGAAAAAAAGAAAAAAAAGAAAAAG----------A-AAA-----------AC-ACG-T-AGGAAAAAGCG-G--TAATCGAA-CCACAG----GTATG-CAT-TTTGGA-CTCATC--A-GTAAGA--C--TGTCGCTAT-A-CGAT-CT-CGG-----CTATTCATCTC-T-TGCAC-G-ATAT---GG--GAA-TT-------TTAAG---CT--AT---TTA-A-A-GTCAACTGGCTT--GGAC-TTAGAAATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--T-AC-AAAAAGT-AAG-----TTTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT----T-T-TTTA-TTT-AC----AAAACAT--T-TT-AC---ACA-TG-AA-CAT--AC-A-CTA--C---C--ATA-TTT-TAC-TCA--GTTTA--CA-A-T--GGAGATCT-TG-A-CCCAC-T-T-TA---TGTGAAA--TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-C-GT-G-CGT-T---TTTCGCGT--AT--ACG-TCA-TGTTC-A-A----T--------T-TG--AT-TTTT-T---CAATGT--CTTTT--------ACTTG-CG--C-ACAC--AAGA--A-AAG--TTATT-TTTGA-ACAC----TAT--GG--TGCTATTGT-GTT--AA-C-TAGAATT-T--AAATTT--T-TCTG-TTT-TCAGGGG-AG--TTTCAATTTT--AA--CTTTG---ATATT-TG-TCCCTC-TG-TGGGC-CTCACGCT-C-GATAAAG-TCACC-C-ATCTTCtt
gi|9 : gG-GTGACTTTTA-TCCGGA--GCGGAAGTG-CCTATTCA-C-GACTC-GGGTACCGTTTATTGCGAAA-TCGGGAGTTTAAAAT--CCA-C-ATT---TTT--A-C-CTG-T-T-TTA-CAATAGA---TACA-GT--C------G-TTCTAAAA--------------GTGCTA--TT-CCAAA-AT--A--TGC-ATT----T------------AA------AATACA---------TAGA--TC--A--TGC---TC-AAA---A--A-AATA-----------------------AAT-CAA-TATGTCA-G-AAT-TG---TT-ACAGG-C-G--A--T-C----ATG-T---------T-TTCCGACATT-AAGCG----TTTT-C--AA-ACT--CA--C-----T-----------A-----------T--------------T-CATTGA-TGTCTGG-AGTA-C---AAGGTA--CC-AAA-TGA-ACTTAGCATATATGCAG-GTG-TTT-GAAA-TTG-TTCTCTT--AACTTTCCTTCAAA-C-TGCCGTTTACA--AAC---CAACACCCGT--T-TCACGGGGAGGGCCCATAAA-TACTGTTTACA-TTTATC-AGCT--AG-CCGC-ATGTTCGAAT-AAG--TAC-TTGT-AGT-C--TC-ATTAA--A----C-------ACA-TA--TTA-TTCGT-AC---C-TT--AGC---AT-C-------AAT-GC-CAAA-------G---T-TTA-TA--------G-GT-A---T-G---TTTCA-GA---AA-A--T--T-CAA--CAC---------C---------------AAAGAGA------------------AAAA----------A-AAA-----------CG-ACG-T-AGGAAAAAAT--G-GTATT-GAA--CACAG----GTATA-CAT-TA-GTA--TCATC--A-ATATGA-----TGTCGCTA--A-CGAT-T--CGGC----CTATTC-TCTC-T-TGCA--G-ATAA---GG--GAA-TT-------T--AG---CT--AT---TTATA-A-GTC
Alignments
lowQualScore : 2222222 44444444444444 1111 111 1111111 444444444444444 11111 55555555555555555 111111 22222 11 11 22222222222 3333333333333333333333 11 1111 3333333333 88888888888888888888888888888888888888888888 11111 111 5555555555555 111 1111 222222 111 1111 11111111 11 2 111 1 11 333333333333 11111 1111111 222222222222 111111 555555555555555555555555555555 222222222222222222 3333333333 11111111111111 11111 1111 11 22 11111111111 11 111 1111 1111 1 333333333333333333333 11 111 111 111 11111111 1111111 11 2222222222222222222222 11111111 11 1 11 22222222
lowQualScore : 6 2222222 99 77 6 5 5 99999999999999 5 3 5 5 0000 77 6 77 5 5 77 5 5 000 5 7777777 5 999999999999999 2 66 5 5 5 33333 5 22222222222222222 444444 1 77777 5 66 11 66 11 5 5 22222222222 7777777777777777777777 888 777 888 5 0 5 6 5 33 66 5 0000 5 6666666666 5 4 888 3 55 2 55 55 33333333333333333333333333333333333333333333 3 3 99999 66 4 4 4 5 4 4 22 5 0 88 444 8 0 4444444444444 444 8 8 8 4444 8 333333 444 7777 55 8 88 88888888 5 8 8 11 0 8 3 55 3 000 5 0 5 55 5 333333333333 4 4 5 4 66666 55 777 3333333 4 4 777777777777 4 4 000000 4 4 88888 777 8 4 4 8 55 55 4 333333333333333333333333333333 999999999999999999 2222222222 4 99999999999999 3 3 0 2 99 66 7 7777 7 888 1 33 44 44 0 99999 9999 9999 55555 1 3 3 3 8888 666 33 3 6666 0 555 555 33 555 2 2 2 55 77 3 999999 22222222222 44 44 3 3 3 3 7 3 3 3 3 44 3 0 33 555 44 2 999 77 88888 3 2222 3 3 3 0000 3 55 3 8 777 4 4 4 000000000000000000000 3 77 8 55 33 4 4 55 4 4 444 5 4 444 111 0 44 555 4 55 4 55555555 3 55 3 3 99999 3 3 3 3 6 555 1 1111111 3 6 33 3 9999999999999999999999 3 555 0 33333333 88 55 3 55 88 3 55 1 3 3 7777 55 11 3 3 99 4 4 2 4 55 8 55 4 1 4 4 4 11 3 66666666 777 11 4 4 1 4 8 3 4 4 4 1 5 5 5
lowQualScore : . ....... .. .. . . . .............. . . . . .... .. . .. . . .. . . ... . ....... . ............... . .. . . . ..... . ................. ...... . ..... . .. .. .. .. . . ........... ...................... ... ... ... . . . . . .. .. . .... . .......... . . ... . .. . .. .. ............................................ . . ..... .. . . . . . . .. . . .. ... . . ............. ... . . . .... . ...... ... .... .. . .. ........ . . . .. . . . .. . ... . . . .. . ............ . . . . ..... .. ... ....... . . ............ . . ...... . . ..... ... . . . . .. .. . .............................. .................. .......... . .............. . . . . .. .. . .... . ... . .. .. .. . ..... .... .... ..... . . . . .... ... .. . .... . ... ... .. ... . . . .. .. . ...... ........... .. .. . . . . . . . . . .. . . .. ... .. . ... .. ..... . .... . . . .... . .. . . ... . . . ..................... . .. . .. .. . . .. . . ... . . ... ... . .. ... . .. . ........ . .. . . ..... . . . . . ... . ....... . . .. . ...................... . ... . ........ .. .. . .. .. . .. . . . .... .. .. . . .. . . . . .. . .. . . . . . .. . ........ ... .. . . . . . . . . . . . . .
lowQualScore : 7 5555555 22 77 7 7 7 66666666666666 7 6 7 7 4444 44 6 99 7 7 44 7 7 000 7 1111111 7 000000000000000 5 99 0 0 0 44444 0 00000000000000000 444444 0 00000 0 99 99 99 99 0 0 44444444444 9999999999999999999999 888 111 222 0 1 0 2 0 11 99 0 6666 0 6666666666 0 4 999 6 00 0 00 00 66666666666666666666666666666666666666666666 6 6 11111 11 4 4 4 7 4 4 00 7 8 66 000 0 8 2222222222222 000 0 0 0 8888 0 000000 000 0000 88 0 88 22222222 6 0 0 00 4 0 2 77 5 222 7 0 0 66 0 888888888888 4 0 7 0 66666 55 000 0000000 0 0 111111111111 0 0 888888 0 0 77777 000 0 0 0 0 55 55 0 111111111111111111111111111111 555555555555555555 0000000000 0 33333333333333 6 6 5 3 00 55 3 7777 3 555 0 44 66 33 3 33333 9999 2222 88888 3 3 3 6 9999 444 88 1 5555 7 444 444 99 000 9 9 9 66 55 3 666666 22222222222 66 66 3 3 3 6 3 6 6 6 3 66 3 4 11 555 66 4 222 99 33333 3 2222 6 6 6 7777 3 00 6 0 000 0 0 0 999999999999999999999 2 33 0 55 55 0 0 55 0 0 888 0 0 666 000 5 88 222 0 55 0 55555555 6 00 6 6 11111 6 6 6 6 7 888 7 9999999 3 7 33 3 7777777777777777777777 3 888 7 22222222 33 00 6 00 66 6 00 0 6 6 7777 00 11 6 6 55 0 0 0 0 55 0 55 0 2 0 0 0 33 2 77777777 000 66 0 0 6 0 0 4 0 0 0 9 0 0 0
consensus : AAGATGG-GTGACTTT-A-TC--GA--GCGGN-GTG-CCTATTCA-C-GACTCAGGGTAC----T---ATTGCG-AAATCGGG-AGTTTAAA-ATCC--G-C-ATTNATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------G-TTCTAAAA--------------GTGCTA--TT-C-AAA-AT--A-ATGC-ATT----CN--------A--AA------AANACAA----ACA-TAGA--TC--A--TGC--ATC-AAAGC-A--G-A------ATA-NT----A---TN----CA-G-AATC---A-T-CGTCA-G-AAT-TTGTTTC-ACGGG-C-AGCA--T-C----ATG-TAT-------T-TTCAGACATT-AAGCG--GGTTTT-C--AACACT--CA--CA----T-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C-C-AAGGTA--CC-AAA-TG-ACA-C-TGGCATATAT-CAGAGTT-T---TT-GAAATTGTTCTCTT-C-----------AACT---TTC-CTTTCAA-C-TGCCGTTTA-A--A-ACC------AACAC---CC----GTACT-TCACGGGGA-GGCCCATAAA-C-TTGTTTACA-TTTATT-CGCT--AGACCGC-ATGTTCGAATCAAGTTTACTTTGT-AGT-CG-TCAATTAA-GA----C-------ACA-TAT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT--CACC-----A--C---------------AAAGAGA------------------AAAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G-GTATTCGAA-CCACAG----GTATG-CAT-TNTGGA-TTCATC--A-NTAAGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT----TCA---AG---CT--AT---TTA-A-A-GTCACCTGGCTTA-GGAC-TTAGAAATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--T-ACAAAAAAGTAAGTTTT--TTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AA-CAT--A--A-CTA--C---C--ATATTTT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG-ACCCCAC-T-C-TA---TGCGAAAT-TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GT-G-CGT-T---TTTCGCGT--ATA-ACG-TCA-TTTTCAA-A----T--------T-TG--A--TTTT-T---CAATGTTCCTTTT--------ACTTG-NG--C-ACAC--AAGA--A-AAG--TTNTT-TTTGA-ACAC----TAT--GG-NCTGA-TTGT-TTT--AA-C-TAGAA-T-T--AAA-TT--T-TCCG-TTT-TCTGGGG-AGT-TTTCAATTTT--AAACCTTTG---ATATT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACC-C-ATCTTCT
Reference ( family-1676 ) : AAGATGG-GTGACTTT-A-TC--GA--GCGGN-GTG-CCTATTCA-C-GACTCAGGGTAC----T---ATTGCG-AAATCGGG-AGTTTAAA-ATCC--G-C-ATTNATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------G-TTCTAAAA--------------GTGCTA--TT-C-AAA-AT--A-ATGC-ATT----CN--------A--AA------AANACAA----ACA-TAGA--TC--A--TGC--ATC-AAAGC-A--G-A------ATA-NT----A---TN----CA-G-AATC---A-T-CGTCA-G-AAT-TTGTTTC-ACGGG-C-AGCA--T-C----ATG-TAT-------T-TTCAGACATT-AAGCG--GGTTTT-C--AACACT--CA--CA----T-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C-C-AAGGTA--CC-AAA-TG-ACA-C-TGGCATATAT-CAGAGTT-T---TT-GAAATTGTTCTCTT-C-----------AACT---TTC-CTTTCAA-C-TGCCGTTTA-A--A-ACC------AACAC---CC----GTACT-TCACGGGGA-GGCCCATAAA-C-TTGTTTACA-TTTATT-CGCT--AGACCGC-ATGTTCGAATCAAGTTTACTTTGT-AGT-CG-TCAATTAA-GA----C-------ACA-TAT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT--CACC-----A--C---------------AAAGAGA------------------AAAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G-GTATTCGAA-CCACAG----GTATG-CAT-TNTGGA-TTCATC--A-NTAAGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT----TCA---AG---CT--AT---TTA-A-A-GTCACCTGGCTTA-GGAC-TTAGAAATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--T-ACAAAAAAGTAAGTTTT--TTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AA-CAT--A--A-CTA--C---C--ATATTTT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG-ACCCCAC-T-C-TA---TGCGAAAT-TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GT-G-CGT-T---TTTCGCGT--ATA-ACG-TCA-TTTTCAA-A----T--------T-TG--A--TTTT-T---CAATGTTCCTTTT--------ACTTG-NG--C-ACAC--AAGA--A-AAG--TTNTT-TTTGA-ACAC----TAT--GG-ACTGA-TTGT-TTT--AA-C-TAGAA-T-T--AAA-TT--T-TCCG-TTT-TCTGGGG-AGT-TTTCAATTTT--AAACCTTTG---ATATT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACC-C-ATCTTCT
gi|1 : TTCA-C-GACTCA---------------TTGCG-AAATTGGGGAGTTTAAA-ATTCTCG-C-TATGATTTTTAA-CATTGTTATGTTA-CAATAGATATTACA-GTACG------GTTTCTAAAA---------------TGCTATCTT-C-AAA-AT--ACATGCAATG----CC--------A--AATACTATAATATAAAAATACA-TAGAGTTCT-A--TAC--ATC-AAAGC-A--G--------ATA-TTTTTAA---TG----CA-GAAATC---ATT-CGTCATA-AAT-TTGTTTCAACGGG-CAAGCA--T-TGCTAATG-TAC--------------ATATT-AAA-G--TGTTTC-CCAAATACC--CC--CA----TATATGCA----A-----------T--------------TACATTGG-TGT-TGGCAGTACC-C-AAGGTAACCT-TAA-TG-ACA-C-TAGGATATA
gi|1 : tttggcaaacaataagctttcttaatGAATCCATTTTGGCATGT-GTT-CG-TCA-TTAA-GA----CTATCGATACAATGTATTA-TTGGTAGA---A-AT--A-C---GTAAGGATCATAAT-GG-CAAAA---A-GACTCT-TTA-TA-A-T----G--T-A---A-G---TTTTA-GAATTAA-A--T--TTCATACCACCCTTATA--C---------------AGTGAGA------------------AAAA----------A-AAATTATTTTAAAAATTACG-T-AGCAAAATGTG-GCGTATTCGAATCCACAG----GTATG-CAT-ATTGAA-TTCATC--ATTTAGGA--CT-TGTCGCTA------AT-TC-----------ATTTTTCTC-G-TG----A-ATAA---AGTCGAA-TTGGGGTCATTTAG---TTAAAA---TTA-A-A-GTCACGTGG--TATGGACTTTAGAAATTTATTTCCTT---T------TG--AT--A-ATT-GCG-GCCAA-AGG-TT-AT-ATTT-ACATAAAAGTAAAGTTT--TTTGTTCAAATTAGAGTGGG-C--AA-----GTCGTCAT-ATTC-T-TTTA-TTT-TTATCTAAAACAT--T-TTAACTAGACATTG-GA-CAT--A--CTCTA--C---C--ATATTTC-T-T-TCAGTGTTTAGCTA-A-TAAGGAGA-CT-TG-A-CCCACAT-C-TATTTTGCCAAATATT-GTGCTTGG-AAAA--G-TAATATCC-AAA-TTTA---TCTT-A-TTTATTAT-T-GT-G-CGTATTAATTTCGCGTTAATA-CCG-TC---TTTTAA-A----TANNNNNNNN-NN--N--NNNN-N---NNNNNNNNNTTTTAAAATATGATTTT-TT--CAATGT--AAGA--A-AAG--CTTTT-TTTGA-ACAC----TAT--GG-ATTGA-TTGT-TGT--AA-C-TAGAA-TCT--AAA-TT--T-TCTG-TTT-CCTGGGG-AGT-TTT-AATTTT--AA--CTTTG---ATATT-TG-TCCCTC-TG-TGGGAACTC-CGCT-C-GATAAAG-TCACT-C-ATCTTCatgcgccgcagccaccgaacaagtacgtgatgctgggtggccgcatttgcattgactcaataccattccacagtaaaactatgtggtgaaatatgttttatcccacaagttgtaaacgagttttgtctttgttgtgtcgatattgtggaatccattttggcatgtgttcgtcattaagactatcgatacaatgtattattggtagaaatacgtaaggatcataatggcaaaaagactctttataatgtaagttttagaattaaatttcataccacccttatacagtgagaaaaaaaaattattttaaaaattacgtagcaaaatgtggcgtattcgaatccacaggtatgcatattgaattcatcatttaggacttgtcgctaattcatttttctcgtgaataaagtcgaattggggtcatttagttaaaattaaagtcacgtggtatggactttagaaatttatttccttttgataattgcggccaaaggttatatttacataaaagtaaagttttttgttcaaattagagtgggcaagtcgtcatattcttttatttttatctaaaacattttaactagacattggacatactctaccatatttctttcagtgtttagctaataaggagacttgacccacatctattttgccaaatattgtgcttggaaaagtaatatccaaatttatcttatttattattgtgcgtattaatttcgcgttaataccgtcttttaaatannnnnnnnnnnnnnnnnnnnnnnnnttttaaaatatgattttttcaatgtaagaaaagctttttttgaacactatggattgattgttgtaactagaatctaaattttctgtttcctggggagttttaattttaactttgatatttgtccctctgtgggaactccgctcgataaagtcactcatcttc
gi|10 : tttggcaaacaataagctttcttaatttcacgactcattgcgaaattggggagtttaaaattctcgctatgatttttaacattgttatgttacaatagatattacagtacggtttctaaaatgctatcttcaaaatacatgcaatgccaaatactataatataaaaatacatagagttctatacatcaaagcagatatttttaatgcagaaatcattcgtcataaatttgtttcaacgggcaagcattgctaatgtacatattaaagtgtttcccaaatacccccatatatgcaattacattggtgttggcagtacccaaggtaaccttaatgacactaggatataatgcgccgcagccaccgaacaagtacgtgatgctgggtggccgcatttgcattgactcaataccattccacagtaaaactatgtggtgaaatatgttttatcccacaagttgtaaacgagttttgtctttgttgtgtcgatattgtgAAGATGG-GTGACTTT-A-T---GA--GCGGA-GTG-CCTATTCA-C-GACTCAGGGTAC----G---ATTGCG-AA-TCGGG-AGTTTAAA-ATCC--G-C-ATTCATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------G-TTCTAAAA---------------TGCTA--TT-C-AAA-AT--A-ATGC-ATT-----A--------A--AA------AAAAT------ACA-TAGA--TC--A--TGC--ATC--AAGC-AAGA-A------ATA-TT----A---AT----CA-G-AATC---A-T-CGTCA-G-AAT-TTGTTTC-AC-AG-C--GCA--T-C----ATG-TA--------T-TTCAGACATT-AAGC---GGTTTT-C--AACACT--CA--CA----TA----------A-----------T--------------TACATTGA-TGTCTGG-ACTACC-C-AAGGTA--CC-AAA-TG-ACA-C-T-GCATATAT-
gi|11 : gT--GT---TTA-AGA-TTCACCTGG--TATGGAC-TTAAAAATTT------TC---T------TG--AT--A-A-T-ATG-G-CAC-AAC-TT-AT-A--T-ACAAAAGA-TCAG--CT--TTGTTTCA---TAGAGTGGATTCAAA-----GTTCTTAT-A--CGT-TTTATTTT-AC----AAAATATTCT-TT-A----ACA-TGAAA-CATACA--A-ATA--C---T--ATATTTT-GACGTCA--GTTTA--CAGA-T--GGAGA-CT-TG-A-CCCAC-TAC-TA---TGTGAAA--TT-GTGCTTGG-AAAA--A-T--------AAA-TCTGCCTTGTT-A-TT-----T-TAGT-G-CGT-T---TTTCGAGT--ATA-ACG-TCA-TTTT--A-A----T--------G-TG--AT-TTTT-T---CAATGTTCCTTTT--------ACTTG-AG----ACAC--AAAA--A-AAG--CTTTT-AATGA-ACACCAAATAT--GG-ATTGA-TTGT-TGT--AA-CTTAGAT-T-T--AAA-TT--T-TCTG-TTT-TCT-TGG-AGT-TTC--ATTTT--A---CTTTG---ATATTCTG-T-CCTC-TG-TGGGCACTC-CACT-C-GATAAAGTTCACC-C-ATCTTgcgcgcaacaccctacagtacgtgccccgcatttgcactgacaaaaccaaccacaaatacttgtaggcgaatattttacccacaggttgtaaagcgttttgctagtgtatcgagattggatttttgcatgaagtaaattaggctccatctcggacacgtcaatgtggtactgtccattctgaagatgctctgcaacataagaatttgcttg
gi|12 : actaAAGATGG-GTGATTTT-G-GC--GA--ACAAT-ATG-CCTATTCA-C-GATTCA---------------TTGCG-AAG-AGGG-AGTTTAAA-ATCC--G-C-ATTGATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------G-TTCTAAAA---------------TGCTA--TT-C-AAA-AT--GTATGC-ATT----CA--------ACCAA------AAAACAAT---ACA-TAGA--TC--A--TAC--ATC-AAAGC-A--G-A------ATATCT----A---AT----CA-G-AATC---A-T-CGTCA-G-AAT-TTGTTTC-ACGGG-C-AGCA--T-C----ATG-TACATATGTAT-TTCAGACATT-AAGC---GGTTTT-C--AACACA--CA--CA----CACAATCATGTAA-----------T--------------TACATTGA-TGTCTGG-ACTA-C-C-A
gi|13 : ag--GAA-TT----TCA---AG---CT--AA---TTA-A-A-GTTACCTGGCGT--GGAC-AAAGACATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-ACG-AT-AT-A--T-ACAAAAA-GTAAGGTTT--GTTT--CA---TAGAGTGGGTC--AT-----GTCTCTAC-A--C-T-TTTA-TTT-ACA---AGA-CAT--T-TT-AC---ACA-AG-AA-CAT--AC-A-CTAGTCTAAC--ATATTTT--AC-TCA--GTTCA--CA-A-T--GGTCA-CT-TG-ACCC-AC-T-C-CA---TACGAAAT-TT-T-GCTTTG-AAAG--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GC-G-CGT-T---TTTCACGT------GCG---A-TTTTGAAGA---------------TG--A--TTTTAT---CA
gi|14 : -TTTGT--TGTTGA-TT-----T-T-TT-AACGT-T------CGTGT--ATA--TG-ACA-TTT-CAA-AAGGAT--------T-T------TTTT-T---CAAAGTCTCTGTC--------AATTA-AG--C-ACATCTAAAATTA-AA-----CCT-TTTGA-AAAC----TATATGG-ATTGG-TTGT-TTC--GA-T-CAGGA-T-G--CAT-TTGTT-TCCA-TTT-TCTTG---AGTGTTTCAATTT----AAC-TTCA---ATATA-TG-TCCCTC-TG-TGGGCTCTC-GGCT-C-AATAAtataattttatttcacgt
gi|15 : CG-T-AGCAAAA--TGTG-GTATTCGAA-CCACAG----GTATG-CAT-ATTGAA-TTCATC--A-TTAGGA--C--TGTCGCTAT-T-CGAT-CT-CGG-----CTATTCATCTC-G-TGAAT----TAA---AGTCGAA-TT----TCA---AG---TT--AT---TTA-A-A-GTCACC
gi|16 : -TGT-TTA-TTCGTA------------GC---ATAA-------AAT-TC-CAGAA---G-AA---T-TGA-AA-A-T----G-GT-A---T-GTTTTTT-ATGAGT-AAGA--TTAT-CAT--AACCA----A--C---------------CAAGAAA------------------AAAA----------ATAGA-----------AT-AAA-C-AAAAAAAAA
gi|17 : ctAA--------------ATG-TA--TT-C-AAA-ATGTA-TTGC-ATT----CTCAAAAACCA--AA------AACACAT----ACA-TAGA--TC--ACTTAC--ATC-AAAGC-AC-G-A------ATA-TTT---A---T-----CA-A-AATC---A---CGTCA-G-AAT-TTGCTTC-ACAGG-C-AGacaaacagaaacacgt
gi|18 : TGGCGCA-GAAC-T---AACCTT------TCCTAT------TC--ATCAA-A-C-ACG-T-CAA-AAG-TT-GT-A--T-ATAAAA--GTAA--TTT--TTCTTTCA---TAGAGTGGGTC--AA-----GTTTCCAT-A--gca
gi|19 : TATTCAAA-CCACAG----GTATG-CAT-ATTGGA-CTCACC--A-TTTGGC--T--TGTCTCTAT-A-CGAT-CT-CGG-----CTATTCATCTT-T-TGGA----ACAT---GGTCGAA-TT----ACA---AT---CT--AT---TTA-A-A-GTCACtgatattttcctcagtttaca
gi|2 : AAGATGGCGTG--TTT-AATC--GATTGCGAC-GTG-CCTATTCA-CTGACTCAGGGTAC----TCTGATTTCG-AAATTCGG-AGTTTTATTCTCC--GTC-ATGCATTT---A-C--TGT-AT-TTATCAATAAATA---CATGTATCCTATTTG-TTCTAAAATGCCTTACTGGTTGGTG-TA--TTTC-AAA-A---A-ATAC-ATC----CGCATGAAA-A--AA------AAGATAC----ACACTAGA--TCTTA--TGCG-ATC-AA-GC-A--GGA------ATA-CT----G---TAATTCCATG-AATTCATA-T-CGTCA-GTAATCTTGTTTC-ACAGGTC-CGCA--TGC----ATGGTAT-------T-TCAGGACATTGAAGCGACGTTTTT-C--AACACT--CCGTCA----TGTA--------A-----------T--------------TACATTGAATGTCTGG-AGTA--------ATC--CT-GAT-TGCATAGT-TGGCTTCTAT----ACTT-TATCTT-GAAGTAACTTCCTT-TAGAGTTTTTGAAATTTGTTTCTCTTGCAA-C-TTTCCTTTC-A--ATGCCGTTTACAACACACACCACTCGTACTCTCAC-GGGA-GGCCC-T--A-C-TTG-TTACATTTTATT-CACT--AG-CCGT-ATGTT-GAATC-AGTTAAC-TTGT-AGT-CGTTCA--TAA-GA----CAT-----ACA-TAT-TTT-TTCGTAAG---C-TT--AGCAAAATAA-------AAT-GCTCAAAA---A-GA---TATTA-TACACT----G-GT-A---C-G---TTT-A-AAAT-AAGA--T--C-CAT---ACCA----A--CCAAACGAGAGAGAAAAAAGAGA------------------AAGA----------A-AAA-----------AC-ACGAT-AGG-GAAAAT--G-GTATTCGAA---ACAGGACAGTATG-CAT-T-TGGA-TCAATCCAG-CTAAGA--C---GTCGCAAA-ACCGAC-T--CGGCTAGGTCATT-ATCT--T-TGCAC-GTATAACATGG--GAATTT----TTA---AG---CT--AT---TT--A-A-GTC-CCT-GCTT--GGAC-TTAGAAATTT------TC---T------TG--AT--ATA-TGGCGTG-CAA-AAG-TT-AT-A--T-AC--AAATGTAAG--CT--TTTTTTCA---TAGAGT-GGTC--AA-----GTCTCCAT-AT-C-TGTTTA-TTT-ATA---AATACAT--TGTTAAC---AC--TG-AACCAT--T--A-TCAATC---CGGATATTTT-ACC-TCG--G-TTA--CA-A-T--GGAGA-CTCTGTACCGCAC-T-C-TA---TTGGAAAT-TT-GTGCTTGGTAAAA--G-T--------AAA-TTTGC--TG-T-A-TT-----TCT-GT-G-CGTCT---TTCCGCGT--ACA-AAG-TCATTTTTCAA-A----T--------TCTGGAA--TTTT-T---TCATGTTTCTTTT--------ACTTGCTG--C-ACAC--AAGA--C-AAG--TTATT-TTTGA-ACAC----TAT--GGTCCTAA-TTGTAGTT--AATC-TAGAA-T-TTAAAA-TT--T-TCTGTTTT-TCTGGGG-GAG-TTTCAATTTTTAAAAC--TTGAATATATT-TGTTTCCTCTTGCTGGGCACTC-CGCT-CTGATAAAG-TCACC-CAATCT
gi|20 : aagGT-T---TTTCGCGT--ATA--CG-TCA-TTTT-AA-A----T--------A-TG--CC-TTTT-T---CAAGGTTCCTTTT--------ACTTG-AG--C-ACAC--AAGA--G-AAG--TTTTT-AATGA-ACAT----TAT--GG-ATTGA-TTGT-Tctttg
gi|21 : T-A--T-ACAAAA-AGTAAG---T--TTTTTTCA---TAGA------C--AAACAATGT-TTCGC-A--C-T-TTTA-TTT-AC----GAAACAT--T-Tg
gi|22 : AA-TT----TCA---AG---CT--ATCCATTT-A-A-GTCACCCGACGT--GAAC-TTAGAAATTT------TT---TTTTTGGTG--AT--A-A-T-gta
gi|23 : TGGA-CTCATC--A-CTAAGA--C--TGTCGCTAA-A-CGAGATC-TG------CTATTCATCTC-T-T
gi|24 : --GGTTTT-C--AATACC--CA--CA----T-----------ACATGCAA----T--------------TACATTGG-TGTCTGG-A
gi|3 : aagtAAGATGG--TGACTTTTA-TC--GA--GCGGA-GTGGCCTATTCA-C-AACTCAGGGTACCGT-T---ATTGCGGAAATCGGG-AGTTTAAA-ATCC--A-CCATTCATTTT--AAC-CTGT-TT-TTA-CAATAGATA---CA-GTAC-------G-TTCTAAAAAG------------GTGCTA--TT-C-CAA-AT--A-ATGC-ATT----TT--------A--AT------AATATAA----ACA-TAGA--TC--A--TGC--ATC-AAAAC-A--G-A------ATA-AC----A---TA----CA---AATC---A-TTCGTCA-G-AAT-TGTTTTC-ACAGG-C--GCA--T-C----ATG-TAT-------T-TTC-GACATT-AAGCG--GGTTTTTC--AA-ACT--CA--C-----T-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C---AAGGTA--CC-AAA-TG-ACA-C-TAGCATATAT-CAGAGTGGT---TT-GAAATTGTTCTCTT-A-----------AACT---TTC-CTTTCAAAC-TGCCGTTTA-A--A-ACC------AACAC---CC----GTA-T-TCACGGGGA-GGCCCATAAAAC-TT--TTACA-TTTATC-AGCTTTAG-CCGCTATGTTCGAATCAAGTTTACTTTGTTAGT-CG-TCAATTAA-AG----C-------ACA-TAT-TTAATTCGTAAA---C-TT--AGC---ATAA---------T-GC-CAAAG----------T-TTA-TA-A------G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT--CACC-----A--C---------------AAAGAGA------------------AAAA----------A-AAA-----------ACGACG-T-AGGAAAAAATG-G-GTATTCGAA-C-ACAG----GTATA-CAT-TATGTACTTCATC--A-ATATGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTC-TCTC-T-TGCA--G-ATAA---GG--GAA-TT----TAC---AG---CT--AT---TTA-A-A-GTTACCTGGCTTA-GGAC-TTAGAA-TTT------TC---T------TGTTAT--A-A-T-GCG-G-CAA-AAGGTT-AT-A--T-ACAAAAAAGTAAATTTTTTTTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AA-CAT--A--A-CTA--C---C--TGATTTTATAC-TCA--GCTTA--CA-ATT--GGAAA-CT-TG-ACCCCAC-T-C-TA---TGTGAAAT-TT-TTGCTTGG-AAAAATG-T------CAAAA-TTTGC--TGTT-A-TT-----T-T-GT-G-ATA-T---TATCGCGT--ATA-ACGTTCATTTTTCAA-A----T--------T-TG--A--TTTT-T---CAATGTTCCTTTT--------ACTTG-CGCTC-ACAC--AA-A--A-AAG--TTATT-TTTGACACAC----TAT--GG-TCTGATTTGT-TTTA-AA-C-TGGAA-T-T--AAA-TT--T-TCTG-TTT-TCTGGGG-AGT-ATACAATTTT--AAACTTTTG---ATATT-TG-T-CCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACCTC-ATCTTCT
gi|4 : AAGATGG-GTGATTTT-G-GC--GA--ACAAT-ATG-CCTTTGCAAC-GACTCA----------T---AT-GCG-A--TCGGG-AGTTTAAA-ATCC--A-T--TTGATATT--A-C-CTGT-AT-TTA-CAATAGATA---CG-GTACC------G-TTC-AAAT--------------ATGCTA--TT-C-AAATAT--T-ATGC-ATTCACGCC--------A--AA------AACACAAT---ACA-T-GG--TC--A--TACAAATCAAAAGCTA--G-AGTAGTCATA-AT----AAGGTC----CA-G-AATC---A-T-CGTCA---AAT-TTGCTTC-ACAGG-C-AGCGATT-C----ATG-CATATTATA-T-TTCAGA-ATT-AAGCG--TG-TTT-C--AACACTTGCA--CA----T-----------GTACAATGTAATT--------------TACATTGG-AGTCTGG-ACTA-T-C-CAAGTA--CA-AAA-CA-A-G-T-GGGCATATAT-
gi|4 : GT-CG--CAATTAA-GA----CT------ACA-TAA-TTA-AAGGTAAA---GATT--AGC---ATAA-------AATTGC-CAAAATTAA-GA----AT-A-TA-A-T----CTGT-AGACTAG---TTT-A--AAT-AA-A--T--T-CAT---ACC-----A--CC--------------AAAGAGA------------------AAAATATAATTAAAA-AAA-----------AT-ACG-T-AG---AAAATT-G-GTATTCGAA-CCACAG----AGATA-CATGTACAGA-CTCATC--A-TAAAGA--CAATATCGCTTC-A------TC-TAGG----CTGTTTATCTC-TGTGAGA-A-ATGC---TG--AAA-TA----TCA---AGAAACT--AT---TTA-A-AAGTCACCTGTATT--GGAC-TTAAAAATTT------TCCT-T------TG--AA--A-C-T-GCG-G-CAA-A----T-CTGA--T-ACAAAAAGGTAAGTTTT--TT----CA---TA-AGTGGGTC--A------GTCTCCAT-A--AAT-TTTA-TTTTACA---AAA-CAT--T-TT-AC---ATA-TG-AA-CAT--ACAA-CTA--C---C--A-ATATT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG---CCCAC-T-C-TAT--TGCGAAAT-TG-T--CTTGG-AAAG--GTT------C-AAA-TTTAC--T-TT-A-TT-----T-T-G--G-C-T-T---TATCGCG----TA-ACG-T-A-TTTTCTA-A----T--------A-TG--AT-TTTT-T---CAATGTTCCTTTT--------ACT---GG--T-ACAC--AAG---A-AAG--CTTTT-TTTCG-ACAC----TAT--G-----GA-TTGG-TTT--AA-C-TAGAA-T-C--TAA-TG--T-TCCG-TTTGTATTAGG-AGA-TTTCAATTT----AACCTTTG---ATA-T-TG-TCCCTC-T--TGGTCACTC-CGCT-C--ATAAAG-TCACA-C-ATCTTCgcgcgcagcacttaaacagtacggctcgcatttgctattgacaaaaccaatcacaaaataattgtagggtgaaattaccacaagttgtaatgattttagctttgtgtgtcagagattgaaattttgccattgtcgcaattaagactacataattaaaggtaaagattagcataaaattgccaaaattaagaatataatctgtagactagtttaaataaattcataccaccaaagagaaaaatataattaaaaaaaatacgtagaaaattggtattcgaaccacagagatacatgtacagactcatcataaagacaatatcgcttcatctaggctgtttatctctgtgagaaatgctgaaatatcaagaaactatttaaaagtcacctgtattggacttaaaaattttcctttgaaactgcggcaaatctgatacaaaaaggtaagttttttcataagtgggtcagtctccataaattttattttacaaaacattttacatatgaacatacaactaccaatatttactcagtttacaatggagacttgcccactctattgcgaaattgtcttggaaaggttcaaatttactttattttggctttatcgcgtaacgtattttctaatatgattttttcaatgttccttttactggtacacaagaaagctttttttcgacactatggattggtttaactagaatctaatgttccgtttgtattaggagatttcaatttaacctttgatattgtccctcttggtcactccgctcataaagtcacacatcttc
gi|5 : aagatgggtgattttggcgaacaatatgcctttgcaacgactcatatgcgatcgggagtttaaaatccatttgatattacctgtatttacaatagatacggtaccgttcaaatatgctattcaaatattatgcattcacgccaaaaacacaatacatggtcatacaaatcaaaagctagagtagtcataataaggtccagaatcatcgtcaaatttgcttcacaggcagcgattcatgcatattatatttcagaattaagcgtgtttcaacacttgcacatgtacaatgtaatttacattggagtctggactatccaagtacaaaacaagtgggcatatatgcgcgcagcacttaaacagtacggctcgcatttgctattgacaaaaccaatcacaaaataattgtagggtgaaattaccacaagttgtaatgattttagctttgtgtgtcagagattgaaattttgccattCG--T-C----AT---AT-------TATTCAGACATT-A-GCT--GGTTTT-C--A-CACT--CA--CAACACT-----------A-----------TGTCAAATTAGATTGTAAATTGA--GTCTGG-AGCA-CTC-GAAGTA--CCCAAA-TG-AAC-C-TGGC-TAT
gi|5 : gagtTGT-GGTTCG-TCA-TTAA-GAATGAC-------A-A-TAT-T-A-TT-GTAAAAAGT-TTGCAGT---AGAA-------ACT-GC-CAAAA-----GA----GTTA-TA-A-TTGGCG-GTTA---A-G---TTT-A-GAAT-AG-AATT--T-TAT---ACC-----AACC---------------AAAGAGA------------------AAAACAAAATTA--G-AAA-----------AT-ACG-TCAGGATAA--TT-G-GTATT-GAA-CCACAG----GTATAACAT-GTTGGA-T-CATC--A-TTAGGAACT--TGTCGTTAT-AGCGAA-TG-CGGC----CT-TTTATCCC-T----AA-G-ATAA------------T----ACA---CG------------------A-ATTACCTTG-TTATGGAC-TTAGAAATTT------TC---T------GG--AT--A-A-T-GCG-GGCAAGAAG-TT-AT----T-A-GAAAAAG--AGTTTT--TT----CA---TCGAG--GGTCC-AA-----GTTTCCAT-AT-C-T-TTTT-ATT-ACA---AAA-CAT--T-TT-AC---AAA-TG-AA-CAC--A--A-CTA--C---C--ATA-TTT-TACTTCA--GTTTAG-CA-A-T--GGAGA-CT-TG---CCCAC-T-C-TA---TGCGAAAT-TTGGTGCT--G-GAAA--G-T------C-AAATTTTAC--TGTT-A--G-----T-T-GT-G-CGT-T---TTTTGCGT---TACGCA-TCA-TTTT-AA-A----TA-------T-TG--A--TTTT-TTTCTAATGTTCTTGTT--------ACTTG-AG--C-A-AC--AAGAT-ATAAGCTTTCTG-TTGGA-ACAC----TAT--GG-ATTGA-TTGT-TTTGCAA-C-TAGAA-T-T--TAA-TT--TCTCCG-TTT-TCTGGAG-AGTATTTC-ATTT----AACTTGTG---ATA-G-TG-TCCCTT-TG-T-GGC-CTT-TGCT-C-GAgcgcgcaacctccgggattttctaggtacgtgtattgacaaagccacacaattactgtgtaggtgaaattttaccagcaagttgcatgatgagttttgcttgtgtgtctagatggaattttgcatgtggttcgtcattaagaatgacaatattattgtaaaaagtttgcagtagaaactgccaaaagagttataattggcggttaagtttagaatagaattttataccaaccaaagagaaaaacaaaattagaaaatacgtcaggataattggtattgaaccacaggtataacatgttggatcatcattaggaacttgtcgttatagcgaatgcggccttttatccctaagataatacacgaattaccttgttatggacttagaaattttctggataatgcgggcaagaagttattagaaaaagagttttttcatcgagggtccaagtttccatatctttttattacaaaacattttacaaatgaacacaactaccatattttacttcagtttagcaatggagacttgcccactctatgcgaaatttggtgctggaaagtcaaattttactgttagttgtgcgttttttgcgttacgcatcattttaaatattgatttttttctaatgttcttgttacttgagcaacaagatataagctttctgttggaacactatggattgattgttttgcaactagaatttaatttctccgttttctggagagtatttcatttaacttgtgatagtgtccctttgtggcctttgctcga
gi|6 : gagtcgtcatattattcagacattagctggttttcacactcacaacactatgtcaaattagattgtaaattgagtctggagcactcgaagtacccaaatgaacctggctatgcgcgcaacctccgggattttctaggtacgtgtattgacaaagccacacaattactgtgtaggtgaaattttaccagcaagttgcatgatgagttttgcttgtgtgtctagatggaattttgca-AAGCG--G-TTTT-C--AACACT--CA--CT----T-----------AA----------T--------------TACATTGA-TGT-TGG-AGTA-C-CCAAGGTA--CC-AAAATG-ACA-C-TG-CATATAG-CAGAGTT-T---TTTGAAATTGT-CTCTTTC-----------AACT---TTC-CTTTCAA-C-TGCCGTTTA-C--A-ACA------AACAC---CC----GTACT-TCACGGAAA-GCCCCA-ATA-C-TTGTTTACA-TTTATTTCACT--AAACCGC-ATGTTCGAATCAAGTT-ACTT-GT-AGT-CG-TTCATTAAAGA----C-------TAA-TAT-T-A-TTCGTAAA---A-TT--AGC---ATAA-------AA--GC-CAAAA---AAGA---TATTA-TA-A-T----G-G--A---T-G---TTT-A-GAAT-AA-A--T--T-CATGCCATC-----A----------------------AGA------------------AAAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G-TAATTCGA--CCACAG----GTATAACAT-TATGTA-TTCATC--A-CTAAGA--C--TGTCGCTATTA-CGAT-TCTCGGC-----TATTCATCTCGT-TGCACCG-ATAA---GG--GAA-TT----TTA---AG---CT--AG---TTA-A-A-GTCACCTGGCTTC-G-AC-TTA-AAATTT------TC---T-------G--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--TGACAAAA---TA--TTTT--TATTTTCA---TAGAGTGGGTC--AA-----GTCTCCATTA--C-T-TTTA-TTT-ACA---AAA-CAT--T-T--AC---ACA-TG-AA-------------------------ATTT---AC-TCA--GTTTAT-CA-A-T--GGAG--CT-TG-ACCC-AC-T----A---TGTGAAAT-TT-T-GCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GTGG-CGT-T---TATCG-GC--GTG-ACG-TCA-TTTTC-A-A----T--------T-TG--AATTTTT-T---CAATGTT-CTTTT--------ACTTGCTG--C-ACAC---AGA--A-AAG--TTA-T-TTTGA-ACAC----TAT--GG-TCTGA-TTGT-TTT--AA-C-TAGAATT-T--AAACTT--T-TCTG-TTT-TCTGGGGAAGT-TTTCAATTTT--TAA-CTTTG---AT-TT-TG-TCCCTC-TGCTGGGCACT--CGCTCC-GAT-TAG-TCACC-C-ATCTTCT
gi|7 : --GGTTTT-C--AACACT--CA--CT----A-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C-CCAAGGTA--CC-AAA-TG-ACA-C-TG-CATATAG-CAGAGTT-T---TT-GAAATTGTTCT-TT-C-----------AACT---TTC-CTTTCAA-CCTGCCGTTTA-ACAA-AAC------ACAAC---CC----GTACT-TCACGGAG--GCCCCATA---C-TTGTTTACA-TTTATT-CACT--AAACCGC-ATGTTCGAATCAG--TTACTT-GT-AGTTCG-TCA-TTAA-GA----CT------ACA-TAT-T-A-TTCGTAAAA--C-TT--AGC---ATAA-------AAA-GC-CAAAA---A-GA---TATTAATA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT---GCC-----A--T---------------CAAGA---------------------AAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G--TATTCGAAACCACAG----GTATA-CAT-TATGTA-TTCATC--A-CTAAGA--C--TGTCGCTAT-A-CGATCTC-CGGC----TTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT----TTA----G---CT--AT---TTA-A-A-GTCACCTGGCTT--GGAC-TTAGAAATTT------TC---T-------G--AT--A-A-T-GCG-G-CAA-AAG-TTTAT-A--T-ACAAAA--GTA--TATT--TTTTTTCAA--TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAA-CAT--T-TT-AC---ACA-TG-AA-CAT-------------------------T-TAC-TCA--GTTT---CA-A-T--GGAGA-CT-TG-ACCC-AC-T-CCTA---TGTGAAAT-TT-T-GCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-ATTT-----T-T-GT-G-CGT-T---TATCGCGT--GT--ACG-TCA-TTTTC-A-A----T--------T-TG--AT-TTTT-T---CAATGTTCCTTTT--------ACTTG-CG--C-ACAC--AAGA--A-AAG--TTATTGTTTGA-ACAC----TAT--GG-TCTGA-TTGT-TTT--AA-C-TAGAATT-T--AAA-TT--T-TCTG-TTT-TCTGGGG-AAG-TTTC-ATTTT--AA---CTTG---AT-TT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GAT-AAG-TCACC-C-ATCTTCTt
gi|8 : cT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-AT-A---T-G---TTT-A-GAAT-AA-A--T--T-CATACCACC-----A--A---------------AGAGAGAAAAAAAGAAAAAAAAGAAAAAG----------A-AAA-----------AC-ACG-T-AGGAAAAAGCG-G--TAATCGAA-CCACAG----GTATG-CAT-TTTGGA-CTCATC--A-GTAAGA--C--TGTCGCTAT-A-CGAT-CT-CGG-----CTATTCATCTC-T-TGCAC-G-ATAT---GG--GAA-TT----TTA---AG---CT--AT---TTA-A-A-GTCAACTGGCTT--GGAC-TTAGAAATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--T-AC-AAAAAGTAAG---T--TTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT----T-T-TTTA-TTT-AC----AAAACAT--T-TT-AC---ACA-TG-AA-CAT--AC-A-CTA--C---C--ATA-TTT-TAC-TCA--GTTTA--CA-A-T--GGAGATCT-TG-A-CCCAC-T-T-TA---TGTGAAA--TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-C-GT-G-CGT-T---TTTCGCGT--AT--ACG-TCA-TGTTC-A-A----T--------T-TG--AT-TTTT-T---CAATGT--CTTTT--------ACTTG-CG--C-ACAC--AAGA--A-AAG--TTATT-TTTGA-ACAC----TAT--GGTGCT-A-TTGT-GTT--AA-C-TAGAATT-T--AAATTT--T-TCTG-TTT-TCAGGGG-AG--TTTCAATTTT--AA--CTTTG---ATATT-TG-TCCCTC-TG-TGGGC-CTCACGCT-C-GATAAAG-TCACC-C-ATCTTCtt
gi|9 : gG-GTGACTTTTA-TCCGGA--GCGGAAGTG-CCTATTCA-C-GACTC-GGGTACCGTTT---ATTGCG-AAATCGGG-AGTTTAAA-ATCC--A-C-ATT---TTT--A-C-CTGT--T-TTA-CAATAGATA---CA-GT--C------G-TTCTAAAA--------------GTGCTA--TT-CCAAA-AT--A--TGC-ATT----T------------AA------AATACA---------TAGA--TC--A--TGC---TC-AAA---A--A-A------ATA-A-----A---TC---------AAT----A-T--GTCA-G-AAT-T-GTT---ACAGG-C-G--A--T-C----ATG-T---------T-TTCCGACATT-AAGCG----TTTT-C--AA-ACT--CA--C-----T-----------A-----------T--------------T-CATTGA-TGTCTGG-AGTA-C---AAGGTA--CC-AAA-TG-A-A-CTTAGCATATATGCAG-GTG-T---TT-GAAATTGTTCTCTT-------------AACT---TTC-CTTCAAA-C-TGCCGTTTACA--A-ACC------AACAC---CC----GT--T-TCACGGGGAGGGCCCATAAA-TACTGTTTACA-TTTATC-AGCT--AG-CCGC-ATGTTCGAAT-AAG--TAC-TTGT-AGT-C--TC-ATTAA--A----C-------ACA-TA--TTA-TTCGT-AC---C-TT--AGC---AT-C-------AAT-GC-CAAA-------G---T-TTA-TA--------G-GT-A---T-G---TTTCA-GA---AA-A--T--T-CAA--CAC---------C---------------AAAGAGA------------------AAAA----------A-AAA-----------CG-ACG-T-AGGAAAAAAT--G-GTATT-GAA--CACAG----GTATA-CAT-TA-GTA--TCATC--A-ATATGA-----TGTCGCTA--A-CGAT-T--CGGC----CTATTC-TCTC-T-TGCA--G-ATAA---GG--GAA-TT----T-----AG---CT--AT---TTATA-A-GTC
Alignments
lowQualScore : 2222222 44444444444444 1111 111 1111111 444444444444444 11111 55555555555555555 111111 22222 11 11 22222222222 3333333333333333333333 11 1111 3333333333 88888888888888888888888888888888888888888888 11111 111 5555555555555 111 1111 222222 111 1111 11111111 11 2 111 1 11 333333333333 11111 1111111 222222222222 111111 555555555555555555555555555555 222222222222222222 3333333333 11111111111111 11111 1111 11 22 11111111111 11 111 1111 1111 1 333333333333333333333 11 111 111 111 11111111 1111111 11 2222222222222222222222 11111111 1 11 22222222
lowQualScore : 6 2222222 99 77 6 5 5 99999999999999 5 3 5 5 0000 77 6 77 5 5 77 5 5 000 5 7777777 5 999999999999999 2 66 5 5 5 33333 5 22222222222222222 444444 1 77777 5 66 11 66 11 5 5 22222222222 7777777777777777777777 888 777 888 5 0 5 6 5 33 66 5 0000 5 6666666666 5 4 888 3 55 2 55 55 33333333333333333333333333333333333333333333 3 3 99999 66 4 4 4 5 4 4 22 5 0 88 444 8 0 4444444444444 444 8 8 8 4444 8 333333 444 7777 55 8 88 88888888 5 8 8 11 0 8 3 55 3 000 5 0 5 55 5 333333333333 4 4 5 4 66666 55 777 3333333 4 4 777777777777 4 4 000000 4 4 88888 777 8 4 4 8 55 55 4 333333333333333333333333333333 999999999999999999 2222222222 4 99999999999999 3 3 0 2 99 66 7 7777 7 888 1 33 44 44 0 99999 9999 9999 55555 1 3 3 3 8888 666 33 3 6666 0 555 555 33 555 2 2 2 55 77 3 999999 22222222222 44 44 3 3 3 3 7 3 3 3 3 44 3 0 33 555 44 2 999 77 88888 3 2222 3 3 3 0000 3 55 3 8 777 4 4 4 000000000000000000000 3 77 8 55 33 4 4 55 4 4 444 5 4 444 111 0 44 555 4 55 4 55555555 3 55 3 3 99999 3 3 3 3 6 555 1 1111111 3 6 33 3 9999999999999999999999 3 555 0 33333333 88 55 3 55 88 3 55 1 3 3 7777 55 99 3 3 99 4 4 2 4 55 8 55 4 1 4 4 4 11 3 66666666 777 11 4 4 1 4 8 3 4 4 4 1 5 5 5
lowQualScore : . ....... .. .. . . . .............. . . . . .... .. . .. . . .. . . ... . ....... . ............... . .. . . . ..... . ................. ...... . ..... . .. .. .. .. . . ........... ...................... ... ... ... . . . . . .. .. . .... . .......... . . ... . .. . .. .. ............................................ . . ..... .. . . . . . . .. . . .. ... . . ............. ... . . . .... . ...... ... .... .. . .. ........ . . . .. . . . .. . ... . . . .. . ............ . . . . ..... .. ... ....... . . ............ . . ...... . . ..... ... . . . . .. .. . .............................. .................. .......... . .............. . . . . .. .. . .... . ... . .. .. .. . ..... .... .... ..... . . . . .... ... .. . .... . ... ... .. ... . . . .. .. . ...... ........... .. .. . . . . . . . . . .. . . .. ... .. . ... .. ..... . .... . . . .... . .. . . ... . . . ..................... . .. . .. .. . . .. . . ... . . ... ... . .. ... . .. . ........ . .. . . ..... . . . . . ... . ....... . . .. . ...................... . ... . ........ .. .. . .. .. . .. . . . .... .. .. . . .. . . . . .. . .. . . . . . .. . ........ ... .. . . . . . . . . . . . . .
lowQualScore : 7 5555555 22 77 7 7 7 66666666666666 7 6 7 7 4444 44 6 99 7 7 44 7 7 000 7 1111111 7 000000000000000 5 99 0 0 0 44444 0 00000000000000000 444444 0 00000 0 99 99 99 99 0 0 44444444444 9999999999999999999999 888 111 222 0 1 0 2 0 11 99 0 6666 0 6666666666 0 4 999 6 00 0 00 00 66666666666666666666666666666666666666666666 6 6 11111 11 4 4 4 7 4 4 00 7 8 66 000 0 8 2222222222222 000 0 0 0 8888 0 000000 000 0000 88 0 88 22222222 6 0 0 00 4 0 2 77 5 222 7 0 0 66 0 888888888888 4 0 7 0 66666 55 000 0000000 0 0 111111111111 0 0 888888 0 0 77777 000 0 0 0 0 55 55 0 111111111111111111111111111111 555555555555555555 0000000000 0 33333333333333 6 6 5 3 00 55 3 7777 3 555 0 44 66 33 3 33333 9999 2222 88888 3 3 3 6 9999 444 88 1 5555 7 444 444 99 000 9 9 9 66 55 3 666666 22222222222 66 66 3 3 3 6 3 6 6 6 3 66 3 4 11 555 66 4 222 99 33333 3 2222 6 6 6 7777 3 00 6 0 000 0 0 0 999999999999999999999 2 33 0 55 55 0 0 55 0 0 888 0 0 666 000 5 88 222 0 55 0 55555555 6 00 6 6 11111 6 6 6 6 7 888 7 9999999 3 7 33 3 7777777777777777777777 3 888 7 22222222 33 00 6 00 66 6 00 0 6 6 7777 00 55 6 6 55 0 0 0 0 55 0 55 0 2 0 0 0 33 2 77777777 000 66 0 0 6 0 0 4 0 0 0 9 0 0 0
consensus : AAGATGG-GTGACTTT-A-TC--GA--GCGGN-GTG-CCTATTCA-C-GACTCAGGGTAC----T---ATTGCG-AAATCGGG-AGTTTAAA-ATCC--G-C-ATTNATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------G-TTCTAAAA--------------GTGCTA--TT-C-AAA-AT--A-ATGC-ATT----CN--------A--AA------AANACAA----ACA-TAGA--TC--A--TGC--ATC-AAAGC-A--G-A------ATA-NT----A---TN----CA-G-AATC---A-T-CGTCA-G-AAT-TTGTTTC-ACGGG-C-AGCA--T-C----ATG-TAT-------T-TTCAGACATT-AAGCG--GGTTTT-C--AACACT--CA--CA----T-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C-C-AAGGTA--CC-AAA-TG-ACA-C-TGGCATATAT-CAGAGTT-T---TT-GAAATTGTTCTCTT-C-----------AACT---TTC-CTTTCAA-C-TGCCGTTTA-A--A-ACC------AACAC---CC----GTACT-TCACGGGGA-GGCCCATAAA-C-TTGTTTACA-TTTATT-CGCT--AGACCGC-ATGTTCGAATCAAGTTTACTTTGT-AGT-CG-TCAATTAA-GA----C-------ACA-TAT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT--CACC-----A--C---------------AAAGAGA------------------AAAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G-GTATTCGAA-CCACAG----GTATG-CAT-TNTGGA-TTCATC--A-NTAAGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT----TCA---AG---CT--AT---TTA-A-A-GTCACCTGGCTTA-GGAC-TTAGAAATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--T-ACAAAAAAGTAAGTTTT--TTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AA-CAT--A--A-CTA--C---C--ATATTTT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG-ACCCCAC-T-C-TA---TGCGAAAT-TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GT-G-CGT-T---TTTCGCGT--ATA-ACG-TCA-TTTTCAA-A----T--------T-TG--A--TTTT-T---CAATGTTCCTTTT--------ACTTG-NG--C-ACAC--AAGA--A-AAG--TTNTT-TTTGA-ACAC----TAT--GG-NCTGA-TTGT-TTT--AA-C-TAGAA-T-T--AAA-TT--T-TCCG-TTT-TCTGGGG-AGT-TTTCAATTTT--AAACCTTTG---ATATT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACC-C-ATCTTCT
Reference ( family-1676 ) : AAGATGG-GTGACTTT-A-TC--GA--GCGGN-GTG-CCTATTCA-C-GACTCAGGGTAC----T---ATTGCG-AAATCGGG-AGTTTAAA-ATCC--G-C-ATTNATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------G-TTCTAAAA--------------GTGCTA--TT-C-AAA-AT--A-ATGC-ATT----CN--------A--AA------AANACAA----ACA-TAGA--TC--A--TGC--ATC-AAAGC-A--G-A------ATA-NT----A---TN----CA-G-AATC---A-T-CGTCA-G-AAT-TTGTTTC-ACGGG-C-AGCA--T-C----ATG-TAT-------T-TTCAGACATT-AAGCG--GGTTTT-C--AACACT--CA--CA----T-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C-C-AAGGTA--CC-AAA-TG-ACA-C-TGGCATATAT-CAGAGTT-T---TT-GAAATTGTTCTCTT-C-----------AACT---TTC-CTTTCAA-C-TGCCGTTTA-A--A-ACC------AACAC---CC----GTACT-TCACGGGGA-GGCCCATAAA-C-TTGTTTACA-TTTATT-CGCT--AGACCGC-ATGTTCGAATCAAGTTTACTTTGT-AGT-CG-TCAATTAA-GA----C-------ACA-TAT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT--CACC-----A--C---------------AAAGAGA------------------AAAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G-GTATTCGAA-CCACAG----GTATG-CAT-TNTGGA-TTCATC--A-NTAAGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT----TCA---AG---CT--AT---TTA-A-A-GTCACCTGGCTTA-GGAC-TTAGAAATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--T-ACAAAAAAGTAAGTTTT--TTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AA-CAT--A--A-CTA--C---C--ATATTTT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG-ACCCCAC-T-C-TA---TGCGAAAT-TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GT-G-CGT-T---TTTCGCGT--ATA-ACG-TCA-TTTTCAA-A----T--------T-TG--A--TTTT-T---CAATGTTCCTTTT--------ACTTG-NG--C-ACAC--AAGA--A-AAG--TTNTT-TTTGA-ACAC----TAT--GG-NCTGA-TTGT-TTT--AA-C-TAGAA-T-T--AAA-TT--T-TCCG-TTT-TCTGGGG-AGT-TTTCAATTTT--AAACCTTTG---ATATT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACC-C-ATCTTCT
gi|1 : TTCA-C-GACTCA---------------TTGCG-AAATTGGGGAGTTTAAA-ATTCTCG-C-TATGATTTTTAA-CATTGTTATGTTA-CAATAGATATTACA-GTACG------GTTTCTAAAA---------------TGCTATCTT-C-AAA-AT--ACATGCAATG----CC--------A--AATACTATAATATAAAAATACA-TAGAGTTCT-A--TAC--ATC-AAAGC-A--G--------ATA-TTTTTAA---TG----CA-GAAATC---ATT-CGTCATA-AAT-TTGTTTCAACGGG-CAAGCA--T-TGCTAATG-TAC--------------ATATT-AAA-G--TGTTTC-CCAAATACC--CC--CA----TATATGCA----A-----------T--------------TACATTGG-TGT-TGGCAGTACC-C-AAGGTAACCT-TAA-TG-ACA-C-TAGGATATA
gi|1 : tttggcaaacaataagctttcttaatGAATCCATTTTGGCATGT-GTT-CG-TCA-TTAA-GA----CTATCGATACAATGTATTA-TTGGTAGA---A-AT--A-C---GTAAGGATCATAAT-GG-CAAAA---A-GACTCT-TTA-TA-A-T----G--T-A---A-G---TTTTA-GAATTAA-A--T--TTCATACCACCCTTATA--C---------------AGTGAGA------------------AAAA----------A-AAATTATTTTAAAAATTACG-T-AGCAAAATGTG-GCGTATTCGAATCCACAG----GTATG-CAT-ATTGAA-TTCATC--ATTTAGGA--CT-TGTCGCTA------AT-TC-----------ATTTTTCTC-G-TG----A-ATAA---AGTCGAA-TTGGGGTCATTTAG---TTAAAA---TTA-A-A-GTCACGTGG--TATGGACTTTAGAAATTTATTTCCTT---T------TG--AT--A-ATT-GCG-GCCAA-AGG-TT-AT-ATTT-ACATAAAAGTAAAGTTT--TTTGTTCAAATTAGAGTGGG-C--AA-----GTCGTCAT-ATTC-T-TTTA-TTT-TTATCTAAAACAT--T-TTAACTAGACATTG-GA-CAT--A--CTCTA--C---C--ATATTTC-T-T-TCAGTGTTTAGCTA-A-TAAGGAGA-CT-TG-A-CCCACAT-C-TATTTTGCCAAATATT-GTGCTTGG-AAAA--G-TAATATCC-AAA-TTTA---TCTT-A-TTTATTAT-T-GT-G-CGTATTAATTTCGCGTTAATA-CCG-TC---TTTTAA-A----TANNNNNNNN-NN--N--NNNN-N---NNNNNNNNNTTTTAAAATATGATTTT-TT--CAATGT--AAGA--A-AAG--CTTTT-TTTGA-ACAC----TAT--GG-ATTGA-TTGT-TGT--AA-C-TAGAA-TCT--AAA-TT--T-TCTG-TTT-CCTGGGG-AGT-TTT-AATTTT--AA--CTTTG---ATATT-TG-TCCCTC-TG-TGGGAACTC-CGCT-C-GATAAAG-TCACT-C-ATCTTCatgcgccgcagccaccgaacaagtacgtgatgctgggtggccgcatttgcattgactcaataccattccacagtaaaactatgtggtgaaatatgttttatcccacaagttgtaaacgagttttgtctttgttgtgtcgatattgtggaatccattttggcatgtgttcgtcattaagactatcgatacaatgtattattggtagaaatacgtaaggatcataatggcaaaaagactctttataatgtaagttttagaattaaatttcataccacccttatacagtgagaaaaaaaaattattttaaaaattacgtagcaaaatgtggcgtattcgaatccacaggtatgcatattgaattcatcatttaggacttgtcgctaattcatttttctcgtgaataaagtcgaattggggtcatttagttaaaattaaagtcacgtggtatggactttagaaatttatttccttttgataattgcggccaaaggttatatttacataaaagtaaagttttttgttcaaattagagtgggcaagtcgtcatattcttttatttttatctaaaacattttaactagacattggacatactctaccatatttctttcagtgtttagctaataaggagacttgacccacatctattttgccaaatattgtgcttggaaaagtaatatccaaatttatcttatttattattgtgcgtattaatttcgcgttaataccgtcttttaaatannnnnnnnnnnnnnnnnnnnnnnnnttttaaaatatgattttttcaatgtaagaaaagctttttttgaacactatggattgattgttgtaactagaatctaaattttctgtttcctggggagttttaattttaactttgatatttgtccctctgtgggaactccgctcgataaagtcactcatcttc
gi|10 : tttggcaaacaataagctttcttaatttcacgactcattgcgaaattggggagtttaaaattctcgctatgatttttaacattgttatgttacaatagatattacagtacggtttctaaaatgctatcttcaaaatacatgcaatgccaaatactataatataaaaatacatagagttctatacatcaaagcagatatttttaatgcagaaatcattcgtcataaatttgtttcaacgggcaagcattgctaatgtacatattaaagtgtttcccaaatacccccatatatgcaattacattggtgttggcagtacccaaggtaaccttaatgacactaggatataatgcgccgcagccaccgaacaagtacgtgatgctgggtggccgcatttgcattgactcaataccattccacagtaaaactatgtggtgaaatatgttttatcccacaagttgtaaacgagttttgtctttgttgtgtcgatattgtgAAGATGG-GTGACTTT-A-T---GA--GCGGA-GTG-CCTATTCA-C-GACTCAGGGTAC----G---ATTGCG-AA-TCGGG-AGTTTAAA-ATCC--G-C-ATTCATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------G-TTCTAAAA---------------TGCTA--TT-C-AAA-AT--A-ATGC-ATT-----A--------A--AA------AAAAT------ACA-TAGA--TC--A--TGC--ATC--AAGC-AAGA-A------ATA-TT----A---AT----CA-G-AATC---A-T-CGTCA-G-AAT-TTGTTTC-AC-AG-C--GCA--T-C----ATG-TA--------T-TTCAGACATT-AAGC---GGTTTT-C--AACACT--CA--CA----TA----------A-----------T--------------TACATTGA-TGTCTGG-ACTACC-C-AAGGTA--CC-AAA-TG-ACA-C-T-GCATATAT-
gi|11 : gT--GT---TTA-AGA-TTCACCTGG--TATGGAC-TTAAAAATTT------TC---T------TG--AT--A-A-T-ATG-G-CAC-AAC-TT-AT-A--T-ACAAAAGA-TCAG--CT--TTGTTTCA---TAGAGTGGATTCAAA-----GTTCTTAT-A--CGT-TTTATTTT-AC----AAAATATTCT-TT-A----ACA-TGAAA-CATACA--A-ATA--C---T--ATATTTT-GACGTCA--GTTTA--CAGA-T--GGAGA-CT-TG-A-CCCAC-TAC-TA---TGTGAAA--TT-GTGCTTGG-AAAA--A-T--------AAA-TCTGCCTTGTT-A-TT-----T-TAGT-G-CGT-T---TTTCGAGT--ATA-ACG-TCA-TTTT--A-A----T--------G-TG--AT-TTTT-T---CAATGTTCCTTTT--------ACTTG-AG----ACAC--AAAA--A-AAG--CTTTT-AATGA-ACACCAAATAT--GG-ATTGA-TTGT-TGT--AA-CTTAGAT-T-T--AAA-TT--T-TCTG-TTT-TCT-TGG-AGT-TTC--ATTTT--A---CTTTG---ATATTCTG-T-CCTC-TG-TGGGCACTC-CACT-C-GATAAAGTTCACC-C-ATCTTgcgcgcaacaccctacagtacgtgccccgcatttgcactgacaaaaccaaccacaaatacttgtaggcgaatattttacccacaggttgtaaagcgttttgctagtgtatcgagattggatttttgcatgaagtaaattaggctccatctcggacacgtcaatgtggtactgtccattctgaagatgctctgcaacataagaatttgcttg
gi|12 : actaAAGATGG-GTGATTTT-G-GC--GA--ACAAT-ATG-CCTATTCA-C-GATTCA---------------TTGCG-AAG-AGGG-AGTTTAAA-ATCC--G-C-ATTGATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------G-TTCTAAAA---------------TGCTA--TT-C-AAA-AT--GTATGC-ATT----CA--------ACCAA------AAAACAAT---ACA-TAGA--TC--A--TAC--ATC-AAAGC-A--G-A------ATATCT----A---AT----CA-G-AATC---A-T-CGTCA-G-AAT-TTGTTTC-ACGGG-C-AGCA--T-C----ATG-TACATATGTAT-TTCAGACATT-AAGC---GGTTTT-C--AACACA--CA--CA----CACAATCATGTAA-----------T--------------TACATTGA-TGTCTGG-ACTA-C-C-A
gi|13 : ag--GAA-TT----TCA---AG---CT--AA---TTA-A-A-GTTACCTGGCGT--GGAC-AAAGACATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-ACG-AT-AT-A--T-ACAAAAA-GTAAGGTTT--GTTT--CA---TAGAGTGGGTC--AT-----GTCTCTAC-A--C-T-TTTA-TTT-ACA---AGA-CAT--T-TT-AC---ACA-AG-AA-CAT--AC-A-CTAGTCTAAC--ATATTTT--AC-TCA--GTTCA--CA-A-T--GGTCA-CT-TG-ACCC-AC-T-C-CA---TACGAAAT-TT-T-GCTTTG-AAAG--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GC-G-CGT-T---TTTCACGT------GCG---A-TTTTGAAGA---------------TG--A--TTTTAT---CA
gi|14 : -TTTGT--TGTTGA-TT-----T-T-TT-AACGT-T------CGTGT--ATA--TG-ACA-TTT-CAA-AAGGAT--------T-T------TTTT-T---CAAAGTCTCTGTC--------AATTA-AG--C-ACATCTAAAATTA-AA-----CCT-TTTGA-AAAC----TATATGG-ATTGG-TTGT-TTC--GA-T-CAGGA-T-G--CAT-TTGTT-TCCA-TTT-TCTTG---AGTGTTTCAATTT----AAC-TTCA---ATATA-TG-TCCCTC-TG-TGGGCTCTC-GGCT-C-AATAAtataattttatttcacgt
gi|15 : CG-T-AGCAAAA--TGTG-GTATTCGAA-CCACAG----GTATG-CAT-ATTGAA-TTCATC--A-TTAGGA--C--TGTCGCTAT-T-CGAT-CT-CGG-----CTATTCATCTC-G-TGAAT----TAA---AGTCGAA-TT----TCA---AG---TT--AT---TTA-A-A-GTCACC
gi|16 : -TGT-TTA-TTCGTA------------GC---ATAA-------AAT-TC-CAGAA---G-AA---T-TGA-AA-A-T----G-GT-A---T-GTTTTTT-ATGAGT-AAGA--TTAT-CAT--AACCA----A--C---------------CAAGAAA------------------AAAA----------ATAGA-----------AT-AAA-C-AAAAAAAAA
gi|17 : ctAA--------------ATG-TA--TT-C-AAA-ATGTA-TTGC-ATT----CTCAAAAACCA--AA------AACACAT----ACA-TAGA--TC--ACTTAC--ATC-AAAGC-AC-G-A------ATA-TTT---A---T-----CA-A-AATC---A---CGTCA-G-AAT-TTGCTTC-ACAGG-C-AGacaaacagaaacacgt
gi|18 : TGGCGCA-GAAC-T---AACCTT------TCCTAT------TC--ATCAA-A-C-ACG-T-CAA-AAG-TT-GT-A--T-ATAAAA--GTAA--TTT--TTCTTTCA---TAGAGTGGGTC--AA-----GTTTCCAT-A--gca
gi|19 : TATTCAAA-CCACAG----GTATG-CAT-ATTGGA-CTCACC--A-TTTGGC--T--TGTCTCTAT-A-CGAT-CT-CGG-----CTATTCATCTT-T-TGGA----ACAT---GGTCGAA-TT----ACA---AT---CT--AT---TTA-A-A-GTCACtgatattttcctcagtttaca
gi|2 : AAGATGGCGTG--TTT-AATC--GATTGCGAC-GTG-CCTATTCA-CTGACTCAGGGTAC----TCTGATTTCG-AAATTCGG-AGTTTTATTCTCC--GTC-ATGCATTT---A-C--TGT-AT-TTATCAATAAATA---CATGTATCCTATTTG-TTCTAAAATGCCTTACTGGTTGGTG-TA--TTTC-AAA-A---A-ATAC-ATC----CGCATGAAA-A--AA------AAGATAC----ACACTAGA--TCTTA--TGCG-ATC-AA-GC-A--GGA------ATA-CT----G---TAATTCCATG-AATTCATA-T-CGTCA-GTAATCTTGTTTC-ACAGGTC-CGCA--TGC----ATGGTAT-------T-TCAGGACATTGAAGCGACGTTTTT-C--AACACT--CCGTCA----TGTA--------A-----------T--------------TACATTGAATGTCTGG-AGTA--------ATC--CT-GAT-TGCATAGT-TGGCTTCTAT----ACTT-TATCTT-GAAGTAACTTCCTT-TAGAGTTTTTGAAATTTGTTTCTCTTGCAA-C-TTTCCTTTC-A--ATGCCGTTTACAACACACACCACTCGTACTCTCAC-GGGA-GGCCC-T--A-C-TTG-TTACATTTTATT-CACT--AG-CCGT-ATGTT-GAATC-AGTTAAC-TTGT-AGT-CGTTCA--TAA-GA----CAT-----ACA-TAT-TTT-TTCGTAAG---C-TT--AGCAAAATAA-------AAT-GCTCAAAA---A-GA---TATTA-TACACT----G-GT-A---C-G---TTT-A-AAAT-AAGA--T--C-CAT---ACCA----A--CCAAACGAGAGAGAAAAAAGAGA------------------AAGA----------A-AAA-----------AC-ACGAT-AGG-GAAAAT--G-GTATTCGAA---ACAGGACAGTATG-CAT-T-TGGA-TCAATCCAG-CTAAGA--C---GTCGCAAA-ACCGAC-T--CGGCTAGGTCATT-ATCT--T-TGCAC-GTATAACATGG--GAATTT----TTA---AG---CT--AT---TT--A-A-GTC-CCT-GCTT--GGAC-TTAGAAATTT------TC---T------TG--AT--ATA-TGGCGTG-CAA-AAG-TT-AT-A--T-AC--AAATGTAAG--CT--TTTTTTCA---TAGAGT-GGTC--AA-----GTCTCCAT-AT-C-TGTTTA-TTT-ATA---AATACAT--TGTTAAC---AC--TG-AACCAT--T--A-TCAATC---CGGATATTTT-ACC-TCG--G-TTA--CA-A-T--GGAGA-CTCTGTACCGCAC-T-C-TA---TTGGAAAT-TT-GTGCTTGGTAAAA--G-T--------AAA-TTTGC--TG-T-A-TT-----TCT-GT-G-CGTCT---TTCCGCGT--ACA-AAG-TCATTTTTCAA-A----T--------TCTGGAA--TTTT-T---TCATGTTTCTTTT--------ACTTGCTG--C-ACAC--AAGA--C-AAG--TTATT-TTTGA-ACAC----TAT--GGTCCTAA-TTGTAGTT--AATC-TAGAA-T-TTAAAA-TT--T-TCTGTTTT-TCTGGGG-GAG-TTTCAATTTTTAAAAC--TTGAATATATT-TGTTTCCTCTTGCTGGGCACTC-CGCT-CTGATAAAG-TCACC-CAATCT
gi|20 : aagGT-T---TTTCGCGT--ATA--CG-TCA-TTTT-AA-A----T--------A-TG--CC-TTTT-T---CAAGGTTCCTTTT--------ACTTG-AG--C-ACAC--AAGA--G-AAG--TTTTT-AATGA-ACAT----TAT--GG-ATTGA-TTGT-Tctttg
gi|21 : T-A--T-ACAAAA-AGTAAG---T--TTTTTTCA---TAGA------C--AAACAATGT-TTCGC-A--C-T-TTTA-TTT-AC----GAAACAT--T-Tg
gi|22 : AA-TT----TCA---AG---CT--ATCCATTT-A-A-GTCACCCGACGT--GAAC-TTAGAAATTT------TT---TTTTTGGTG--AT--A-A-T-gta
gi|23 : TGGA-CTCATC--A-CTAAGA--C--TGTCGCTAA-A-CGAGATC-TG------CTATTCATCTC-T-T
gi|24 : --GGTTTT-C--AATACC--CA--CA----T-----------ACATGCAA----T--------------TACATTGG-TGTCTGG-A
gi|3 : aagtAAGATGG--TGACTTTTA-TC--GA--GCGGA-GTGGCCTATTCA-C-AACTCAGGGTACCGT-T---ATTGCGGAAATCGGG-AGTTTAAA-ATCC--A-CCATTCATTTT--AAC-CTGT-TT-TTA-CAATAGATA---CA-GTAC-------G-TTCTAAAAAG------------GTGCTA--TT-C-CAA-AT--A-ATGC-ATT----TT--------A--AT------AATATAA----ACA-TAGA--TC--A--TGC--ATC-AAAAC-A--G-A------ATA-AC----A---TA----CA---AATC---A-TTCGTCA-G-AAT-TGTTTTC-ACAGG-C--GCA--T-C----ATG-TAT-------T-TTC-GACATT-AAGCG--GGTTTTTC--AA-ACT--CA--C-----T-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C---AAGGTA--CC-AAA-TG-ACA-C-TAGCATATAT-CAGAGTGGT---TT-GAAATTGTTCTCTT-A-----------AACT---TTC-CTTTCAAAC-TGCCGTTTA-A--A-ACC------AACAC---CC----GTA-T-TCACGGGGA-GGCCCATAAAAC-TT--TTACA-TTTATC-AGCTTTAG-CCGCTATGTTCGAATCAAGTTTACTTTGTTAGT-CG-TCAATTAA-AG----C-------ACA-TAT-TTAATTCGTAAA---C-TT--AGC---ATAA---------T-GC-CAAAG----------T-TTA-TA-A------G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT--CACC-----A--C---------------AAAGAGA------------------AAAA----------A-AAA-----------ACGACG-T-AGGAAAAAATG-G-GTATTCGAA-C-ACAG----GTATA-CAT-TATGTACTTCATC--A-ATATGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTC-TCTC-T-TGCA--G-ATAA---GG--GAA-TT----TAC---AG---CT--AT---TTA-A-A-GTTACCTGGCTTA-GGAC-TTAGAA-TTT------TC---T------TGTTAT--A-A-T-GCG-G-CAA-AAGGTT-AT-A--T-ACAAAAAAGTAAATTTTTTTTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AA-CAT--A--A-CTA--C---C--TGATTTTATAC-TCA--GCTTA--CA-ATT--GGAAA-CT-TG-ACCCCAC-T-C-TA---TGTGAAAT-TT-TTGCTTGG-AAAAATG-T------CAAAA-TTTGC--TGTT-A-TT-----T-T-GT-G-ATA-T---TATCGCGT--ATA-ACGTTCATTTTTCAA-A----T--------T-TG--A--TTTT-T---CAATGTTCCTTTT--------ACTTG-CGCTC-ACAC--AA-A--A-AAG--TTATT-TTTGACACAC----TAT--GG-TCTGATTTGT-TTTA-AA-C-TGGAA-T-T--AAA-TT--T-TCTG-TTT-TCTGGGG-AGT-ATACAATTTT--AAACTTTTG---ATATT-TG-T-CCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACCTC-ATCTTCT
gi|4 : AAGATGG-GTGATTTT-G-GC--GA--ACAAT-ATG-CCTTTGCAAC-GACTCA----------T---AT-GCG-A--TCGGG-AGTTTAAA-ATCC--A-T--TTGATATT--A-C-CTGT-AT-TTA-CAATAGATA---CG-GTACC------G-TTC-AAAT--------------ATGCTA--TT-C-AAATAT--T-ATGC-ATTCACGCC--------A--AA------AACACAAT---ACA-T-GG--TC--A--TACAAATCAAAAGCTA--G-AGTAGTCATA-AT----AAGGTC----CA-G-AATC---A-T-CGTCA---AAT-TTGCTTC-ACAGG-C-AGCGATT-C----ATG-CATATTATA-T-TTCAGA-ATT-AAGCG--TG-TTT-C--AACACTTGCA--CA----T-----------GTACAATGTAATT--------------TACATTGG-AGTCTGG-ACTA-T-C-CAAGTA--CA-AAA-CA-A-G-T-GGGCATATAT-
gi|4 : GT-CG--CAATTAA-GA----CT------ACA-TAA-TTA-AAGGTAAA---GATT--AGC---ATAA-------AATTGC-CAAAATTAA-GA----AT-A-TA-A-T----CTGT-AGACTAG---TTT-A--AAT-AA-A--T--T-CAT---ACC-----A--CC--------------AAAGAGA------------------AAAATATAATTAAAA-AAA-----------AT-ACG-T-AG---AAAATT-G-GTATTCGAA-CCACAG----AGATA-CATGTACAGA-CTCATC--A-TAAAGA--CAATATCGCTTC-A------TC-TAGG----CTGTTTATCTC-TGTGAGA-A-ATGC---TG--AAA-TA----TCA---AGAAACT--AT---TTA-A-AAGTCACCTGTATT--GGAC-TTAAAAATTT------TCCT-T------TG--AA--A-C-T-GCG-G-CAA-A----T-CTGA--T-ACAAAAAGGTAAGTTTT--TT----CA---TA-AGTGGGTC--A------GTCTCCAT-A--AAT-TTTA-TTTTACA---AAA-CAT--T-TT-AC---ATA-TG-AA-CAT--ACAA-CTA--C---C--A-ATATT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG---CCCAC-T-C-TAT--TGCGAAAT-TG-T--CTTGG-AAAG--GTT------C-AAA-TTTAC--T-TT-A-TT-----T-T-G--G-C-T-T---TATCGCG----TA-ACG-T-A-TTTTCTA-A----T--------A-TG--AT-TTTT-T---CAATGTTCCTTTT--------ACT---GG--T-ACAC--AAG---A-AAG--CTTTT-TTTCG-ACAC----TAT--G-----GA-TTGG-TTT--AA-C-TAGAA-T-C--TAA-TG--T-TCCG-TTTGTATTAGG-AGA-TTTCAATTT----AACCTTTG---ATA-T-TG-TCCCTC-T--TGGTCACTC-CGCT-C--ATAAAG-TCACA-C-ATCTTCgcgcgcagcacttaaacagtacggctcgcatttgctattgacaaaaccaatcacaaaataattgtagggtgaaattaccacaagttgtaatgattttagctttgtgtgtcagagattgaaattttgccattgtcgcaattaagactacataattaaaggtaaagattagcataaaattgccaaaattaagaatataatctgtagactagtttaaataaattcataccaccaaagagaaaaatataattaaaaaaaatacgtagaaaattggtattcgaaccacagagatacatgtacagactcatcataaagacaatatcgcttcatctaggctgtttatctctgtgagaaatgctgaaatatcaagaaactatttaaaagtcacctgtattggacttaaaaattttcctttgaaactgcggcaaatctgatacaaaaaggtaagttttttcataagtgggtcagtctccataaattttattttacaaaacattttacatatgaacatacaactaccaatatttactcagtttacaatggagacttgcccactctattgcgaaattgtcttggaaaggttcaaatttactttattttggctttatcgcgtaacgtattttctaatatgattttttcaatgttccttttactggtacacaagaaagctttttttcgacactatggattggtttaactagaatctaatgttccgtttgtattaggagatttcaatttaacctttgatattgtccctcttggtcactccgctcataaagtcacacatcttc
gi|5 : aagatgggtgattttggcgaacaatatgcctttgcaacgactcatatgcgatcgggagtttaaaatccatttgatattacctgtatttacaatagatacggtaccgttcaaatatgctattcaaatattatgcattcacgccaaaaacacaatacatggtcatacaaatcaaaagctagagtagtcataataaggtccagaatcatcgtcaaatttgcttcacaggcagcgattcatgcatattatatttcagaattaagcgtgtttcaacacttgcacatgtacaatgtaatttacattggagtctggactatccaagtacaaaacaagtgggcatatatgcgcgcagcacttaaacagtacggctcgcatttgctattgacaaaaccaatcacaaaataattgtagggtgaaattaccacaagttgtaatgattttagctttgtgtgtcagagattgaaattttgccattCG--T-C----AT---AT-------TATTCAGACATT-A-GCT--GGTTTT-C--A-CACT--CA--CAACACT-----------A-----------TGTCAAATTAGATTGTAAATTGA--GTCTGG-AGCA-CTC-GAAGTA--CCCAAA-TG-AAC-C-TGGC-TAT
gi|5 : gagtTGT-GGTTCG-TCA-TTAA-GAATGAC-------A-A-TAT-T-A-TT-GTAAAAAGT-TTGCAGT---AGAA-------ACT-GC-CAAAA-----GA----GTTA-TA-A-TTGGCG-GTTA---A-G---TTT-A-GAAT-AG-AATT--T-TAT---ACC-----AACC---------------AAAGAGA------------------AAAACAAAATTA--G-AAA-----------AT-ACG-TCAGGATAA--TT-G-GTATT-GAA-CCACAG----GTATAACAT-GTTGGA-T-CATC--A-TTAGGAACT--TGTCGTTAT-AGCGAA-TG-CGGC----CT-TTTATCCC-T----AA-G-ATAA------------T----ACA---CG------------------A-ATTACCTTG-TTATGGAC-TTAGAAATTT------TC---T------GG--AT--A-A-T-GCG-GGCAAGAAG-TT-AT----T-A-GAAAAAG--AGTTTT--TT----CA---TCGAG--GGTCC-AA-----GTTTCCAT-AT-C-T-TTTT-ATT-ACA---AAA-CAT--T-TT-AC---AAA-TG-AA-CAC--A--A-CTA--C---C--ATA-TTT-TACTTCA--GTTTAG-CA-A-T--GGAGA-CT-TG---CCCAC-T-C-TA---TGCGAAAT-TTGGTGCT--G-GAAA--G-T------C-AAATTTTAC--TGTT-A--G-----T-T-GT-G-CGT-T---TTTTGCGT---TACGCA-TCA-TTTT-AA-A----TA-------T-TG--A--TTTT-TTTCTAATGTTCTTGTT--------ACTTG-AG--C-A-AC--AAGAT-ATAAGCTTTCTG-TTGGA-ACAC----TAT--GG-ATTGA-TTGT-TTTGCAA-C-TAGAA-T-T--TAA-TT--TCTCCG-TTT-TCTGGAG-AGTATTTC-ATTT----AACTTGTG---ATA-G-TG-TCCCTT-TG-T-GGC-CTT-TGCT-C-GAgcgcgcaacctccgggattttctaggtacgtgtattgacaaagccacacaattactgtgtaggtgaaattttaccagcaagttgcatgatgagttttgcttgtgtgtctagatggaattttgcatgtggttcgtcattaagaatgacaatattattgtaaaaagtttgcagtagaaactgccaaaagagttataattggcggttaagtttagaatagaattttataccaaccaaagagaaaaacaaaattagaaaatacgtcaggataattggtattgaaccacaggtataacatgttggatcatcattaggaacttgtcgttatagcgaatgcggccttttatccctaagataatacacgaattaccttgttatggacttagaaattttctggataatgcgggcaagaagttattagaaaaagagttttttcatcgagggtccaagtttccatatctttttattacaaaacattttacaaatgaacacaactaccatattttacttcagtttagcaatggagacttgcccactctatgcgaaatttggtgctggaaagtcaaattttactgttagttgtgcgttttttgcgttacgcatcattttaaatattgatttttttctaatgttcttgttacttgagcaacaagatataagctttctgttggaacactatggattgattgttttgcaactagaatttaatttctccgttttctggagagtatttcatttaacttgtgatagtgtccctttgtggcctttgctcga
gi|6 : gagtcgtcatattattcagacattagctggttttcacactcacaacactatgtcaaattagattgtaaattgagtctggagcactcgaagtacccaaatgaacctggctatgcgcgcaacctccgggattttctaggtacgtgtattgacaaagccacacaattactgtgtaggtgaaattttaccagcaagttgcatgatgagttttgcttgtgtgtctagatggaattttgca-AAGCG--G-TTTT-C--AACACT--CA--CT----T-----------AA----------T--------------TACATTGA-TGT-TGG-AGTA-C-CCAAGGTA--CC-AAAATG-ACA-C-TG-CATATAG-CAGAGTT-T---TTTGAAATTGT-CTCTTTC-----------AACT---TTC-CTTTCAA-C-TGCCGTTTA-C--A-ACA------AACAC---CC----GTACT-TCACGGAAA-GCCCCA-ATA-C-TTGTTTACA-TTTATTTCACT--AAACCGC-ATGTTCGAATCAAGTT-ACTT-GT-AGT-CG-TTCATTAAAGA----C-------TAA-TAT-T-A-TTCGTAAA---A-TT--AGC---ATAA-------AA--GC-CAAAA---AAGA---TATTA-TA-A-T----G-G--A---T-G---TTT-A-GAAT-AA-A--T--T-CATGCCATC-----A----------------------AGA------------------AAAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G-TAATTCGA--CCACAG----GTATAACAT-TATGTA-TTCATC--A-CTAAGA--C--TGTCGCTATTA-CGAT-TCTCGGC-----TATTCATCTCGT-TGCACCG-ATAA---GG--GAA-TT----TTA---AG---CT--AG---TTA-A-A-GTCACCTGGCTTC-G-AC-TTA-AAATTT------TC---T-------G--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--TGACAAAA---TA--TTTT--TATTTTCA---TAGAGTGGGTC--AA-----GTCTCCATTA--C-T-TTTA-TTT-ACA---AAA-CAT--T-T--AC---ACA-TG-AA-------------------------ATTT---AC-TCA--GTTTAT-CA-A-T--GGAG--CT-TG-ACCC-AC-T----A---TGTGAAAT-TT-T-GCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GTGG-CGT-T---TATCG-GC--GTG-ACG-TCA-TTTTC-A-A----T--------T-TG--AATTTTT-T---CAATGTT-CTTTT--------ACTTGCTG--C-ACAC---AGA--A-AAG--TTA-T-TTTGA-ACAC----TAT--GG-TCTGA-TTGT-TTT--AA-C-TAGAATT-T--AAACTT--T-TCTG-TTT-TCTGGGGAAGT-TTTCAATTTT--TAA-CTTTG---AT-TT-TG-TCCCTC-TGCTGGGCACT--CGCTCC-GAT-TAG-TCACC-C-ATCTTCT
gi|7 : --GGTTTT-C--AACACT--CA--CT----A-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C-CCAAGGTA--CC-AAA-TG-ACA-C-TG-CATATAG-CAGAGTT-T---TT-GAAATTGTTCT-TT-C-----------AACT---TTC-CTTTCAA-CCTGCCGTTTA-ACAA-AAC------ACAAC---CC----GTACT-TCACGGAG--GCCCCATA---C-TTGTTTACA-TTTATT-CACT--AAACCGC-ATGTTCGAATCAG--TTACTT-GT-AGTTCG-TCA-TTAA-GA----CT------ACA-TAT-T-A-TTCGTAAAA--C-TT--AGC---ATAA-------AAA-GC-CAAAA---A-GA---TATTAATA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT---GCC-----A--T---------------CAAGA---------------------AAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G--TATTCGAAACCACAG----GTATA-CAT-TATGTA-TTCATC--A-CTAAGA--C--TGTCGCTAT-A-CGATCTC-CGGC----TTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT----TTA----G---CT--AT---TTA-A-A-GTCACCTGGCTT--GGAC-TTAGAAATTT------TC---T-------G--AT--A-A-T-GCG-G-CAA-AAG-TTTAT-A--T-ACAAAA--GTA--TATT--TTTTTTCAA--TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAA-CAT--T-TT-AC---ACA-TG-AA-CAT-------------------------T-TAC-TCA--GTTT---CA-A-T--GGAGA-CT-TG-ACCC-AC-T-CCTA---TGTGAAAT-TT-T-GCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-ATTT-----T-T-GT-G-CGT-T---TATCGCGT--GT--ACG-TCA-TTTTC-A-A----T--------T-TG--AT-TTTT-T---CAATGTTCCTTTT--------ACTTG-CG--C-ACAC--AAGA--A-AAG--TTATTGTTTGA-ACAC----TAT--GG-TCTGA-TTGT-TTT--AA-C-TAGAATT-T--AAA-TT--T-TCTG-TTT-TCTGGGG-AAG-TTTC-ATTTT--AA---CTTG---AT-TT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GAT-AAG-TCACC-C-ATCTTCTt
gi|8 : cT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-AT-A---T-G---TTT-A-GAAT-AA-A--T--T-CATACCACC-----A--A---------------AGAGAGAAAAAAAGAAAAAAAAGAAAAAG----------A-AAA-----------AC-ACG-T-AGGAAAAAGCG-G--TAATCGAA-CCACAG----GTATG-CAT-TTTGGA-CTCATC--A-GTAAGA--C--TGTCGCTAT-A-CGAT-CT-CGG-----CTATTCATCTC-T-TGCAC-G-ATAT---GG--GAA-TT----TTA---AG---CT--AT---TTA-A-A-GTCAACTGGCTT--GGAC-TTAGAAATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--T-AC-AAAAAGTAAG---T--TTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT----T-T-TTTA-TTT-AC----AAAACAT--T-TT-AC---ACA-TG-AA-CAT--AC-A-CTA--C---C--ATA-TTT-TAC-TCA--GTTTA--CA-A-T--GGAGATCT-TG-A-CCCAC-T-T-TA---TGTGAAA--TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-C-GT-G-CGT-T---TTTCGCGT--AT--ACG-TCA-TGTTC-A-A----T--------T-TG--AT-TTTT-T---CAATGT--CTTTT--------ACTTG-CG--C-ACAC--AAGA--A-AAG--TTATT-TTTGA-ACAC----TAT--GGTGCT-A-TTGT-GTT--AA-C-TAGAATT-T--AAATTT--T-TCTG-TTT-TCAGGGG-AG--TTTCAATTTT--AA--CTTTG---ATATT-TG-TCCCTC-TG-TGGGC-CTCACGCT-C-GATAAAG-TCACC-C-ATCTTCtt
gi|9 : gG-GTGACTTTTA-TCCGGA--GCGGAAGTG-CCTATTCA-C-GACTC-GGGTACCGTTT---ATTGCG-AAATCGGG-AGTTTAAA-ATCC--A-C-ATT---TTT--A-C-CTGT--T-TTA-CAATAGATA---CA-GT--C------G-TTCTAAAA--------------GTGCTA--TT-CCAAA-AT--A--TGC-ATT----T------------AA------AATACA---------TAGA--TC--A--TGC---TC-AAA---A--A-A------ATA-A-----A---TC---------AAT----A-T--GTCA-G-AAT-T-GTT---ACAGG-C-G--A--T-C----ATG-T---------T-TTCCGACATT-AAGCG----TTTT-C--AA-ACT--CA--C-----T-----------A-----------T--------------T-CATTGA-TGTCTGG-AGTA-C---AAGGTA--CC-AAA-TG-A-A-CTTAGCATATATGCAG-GTG-T---TT-GAAATTGTTCTCTT-------------AACT---TTC-CTTCAAA-C-TGCCGTTTACA--A-ACC------AACAC---CC----GT--T-TCACGGGGAGGGCCCATAAA-TACTGTTTACA-TTTATC-AGCT--AG-CCGC-ATGTTCGAAT-AAG--TAC-TTGT-AGT-C--TC-ATTAA--A----C-------ACA-TA--TTA-TTCGT-AC---C-TT--AGC---AT-C-------AAT-GC-CAAA-------G---T-TTA-TA--------G-GT-A---T-G---TTTCA-GA---AA-A--T--T-CAA--CAC---------C---------------AAAGAGA------------------AAAA----------A-AAA-----------CG-ACG-T-AGGAAAAAAT--G-GTATT-GAA--CACAG----GTATA-CAT-TA-GTA--TCATC--A-ATATGA-----TGTCGCTA--A-CGAT-T--CGGC----CTATTC-TCTC-T-TGCA--G-ATAA---GG--GAA-TT----T-----AG---CT--AT---TTATA-A-GTC
blockSeqs : C TATCCG TT AA G A T GGGTACCGTTT G G . T GT CA C . A . A . T . T CCTATTT . TGCCTTACTGGTTGG C . T C T GTAT . CTCAAAAACCA . A AT C . TT CT AA A T GAGTAGTC CTGTAATTCCATG CAT TT GT C . G T A AT G . G CATATGTAT A G GAC T . C TG GT AACACTATGTCAAATTAGATTG A . CCC . C A C C G T GG G GG . T TC . . A C ACA . . . . AC . AG ATAAAAC T . T TT A T A GT A TTT T T T AA A ATGAC . . T A AAGT GC AAA . T T TTAAGAA A C TTGGC T T GACTA TTT C T . G AT TA . ACCAACCAAACGAGAGAGAAA AAAAAAGAAAAAAAAGAA TATAATTAAA T ACG A C A GT G A GACA A GTA A CT CA T CAA AAC ATC CTAGG A G G A CGT CAT TC T . . AAA . CCA T G A CG AT . . TTTTTGGT TT CA T . G T G G G T G . G GA GGT TT G A CA ACAAT T CG G T T A A TC G A . . A C ACACTAGTCTAACAT T AT G . G G T . T C TAC C . AC T T GGT T AT T CA T CT G T . C A G A C . T ATAA T T GA G TTCTGGAA A TTC . CT CT . CT TT T CT T G C CAAA AT TC T A GC T T T . TA C GT C T T G A TG A TTAAAAC AAT AT C T C T C A A C T A T T A
blockSeqs : . AATC . T . . . GGGTACTCTG . A . . G A G . . . A . . . . C . AGG C . . . . GTA . CGCATGAAAA . A AT . . . . G . . AGAA ATAAGGTCCAG . T G . . A . A . . . . TATTATAT A . G . . C . . ACACAATCATGTAAT . . CTC . . . . T . . AG . T . . A . . . . CA . . . . AC . A ATAAATA T . . . A . A GT T TT . T . AA . CAT . . T . GA . . . . . AAGATA . . CT . . T . . . . G . . . ACCACCAA . CAAAATTA . AT . . A G G . . A AT G T . T ACT TAG TCT C A . . G CCG . TC . . . . . . . . . CG AT . . CTATT . . . . . . . . . . . . . AT ATT . T . C . . TC . . . A A . . . . . . . TATCAATCCGGAT T G T . T . . . . . AC C . CC . T GT . . . C . . . . . . . . . . . T ACAA . T CA . AGGATTT . . . CT . . . T . . C . . . . TG . . A . . T . . T . . C . . . TA A TAAACT . AT . . T . C T . . . A . . .
blockSeqs : . TATC . C . . . GGGTACCGTT . A . . G A C . . . A . . . . C . A C . . . . AA . CACGCCA . C T . . . . . . . CGA TCTAATCAG . T G . . A . C . . . . TTA G . G . . C . . ATGTACAATGTAATT . . CCC . . . . C . . GG . T . . C . . . . A . . . . A . A AATAC T . . . . . A GT T TT . . . CA . CT . . T . AC . . . . . AGATA . . T . . C . . . . . . . . AACCAAC . . . AC . . A T G . . . AT G C . C C TTA CTC G A . . C AA . . . . . . . . . . . CT A . . CTTT . . . . . . . . . . . . . AA GTT . C . . . . AA . . . A A . . . . . . . ACAAATACTAT T A . . . . . . . . AC C . C . T GT . . . C . . . . . . . . . . . T ATAA . . CA . TTTGAAT . . . A . . . . . . A . . . . A . . . . . T . . . . . T . . . T A TTAAC . AT . . C . . A . . . A . . .
blockSeqs : . GGC . A . . . GGGTACG . A . . A A C . . . T . . . . C . A C . . . . AA . CAACC . G C . . . . . . . GGA TTAATCAG . T G . . A . A . . . . TT A . T . . T . . ATACATGCAAT . . CCC . . . . A . . GG . G . . . . . . . C . . . . . . . ATAC . . . . . . A G T TT . . . A . CT . . T . C . . . . . AGATA . . T . . T . . . . . . . . ACCAACC . . . AT . . A T G . . . TA G T . C T TT CT C A . . C AG . . . . . . . . . . . CG A . . TT . . . . . . . . . . . . . AG GTT . T . . . . TC . . . A A . . . . . . . ACAACTACCA T T . . . . . . . . AC C . C . T TT . . . C . . . . . . . . . . . T TACG . . CA . TGTGAT . . . A . . . . . . T . . . . A . . . . . . . . . . . T . . . G A AACC . AT . . C . . A . . . A . . .
blockSeqs : . GGC . T . . . T . . . . A A G . . . A . . . . C . G C . . . . AA . TTA . T A . . . . . . . GA TTTATCAA . T G . . A . G . . . . TT A . G . . C . . ATGTAAT . . CC . . . . C . . AG . . . . TT . . . A . C . . T . C . . . . . AGATA . . T . . A . . . . . . . . GCCATCA . . . AT . . A G G . . . GT T C . A C TA CT C A . . A CG . . . . . . . . . . . CT C . . TT . . . . . . . . . . . . . AA TT . T . . . . C . . . A A . . . . . . . ACACTACCAT T T . . . . . . . . AC C . C . T TT . . . C . . . . . . . . . . . A GTGA . . CT . TATGCC . . . A . . . . . . A . . . . A . . . . . . . . . . . C . . . T A AACT . AT . . C . . A . . . A . . .
blockSeqs : . . . . . . . A . . . . . . . . . . . . . . . . . . TA . AA . C . . . . . . . . GA ACATACA . T G . . A . . . . . . T C . G . . C . . ATAAT . . TC . . . . C . . G . . . . A . C . . T . A . . . . . GAAT . . T . . T . . . . . . . . CACCAC . . . AC . . A G T . . . TA G C . T C AA TC C A . . C CG . . . . . . . . . . . AT . . . TT . . . . . . . . . . . . . AA TA . T . . . . C . . . A . . . . . . . . AACTACCTG T T . . . . . . . . A C . C . T T . . . C . . . . . . . . . . . A ATA . . A . TATGAT . . . C . . . . . . T . . . . T . . . . . . . . . . . C . . . A A TAAC . A . . C . . A . . . A . . .
blockSeqs : . . . . . . A . T . T . . . . . . . . AA AATC . . . . . . . . . . . . T . . . . . C . . TTAAT . . C . . . . . . . G . . A . C . . . . C . . . . . GAG . . T . . T . . . . . . . . ACCACC . . . AC . . A G G . . . TA G T . T C TA TC C A . . C T . . . . . . . . . . . CT . . . TT . . . . . . . . . . . . . A G . T . . . . C . . . A . . . . . . . . AACTACCAT . T . . . . . . . . A . . C . T T . . . C . . . . . . . . . . . T ATA . . A . TATTGA . . . G . . . . . . C . . . . A . . . . . . . . . . . T . . . T . TAC . A . . C . . A . . . . . . .
blockSeqs : . . . . C . . TAAT . . C . . . . . . . G . . . . C . . . . . GT . . . . . T . . . . . . . . GCCAT . . . AC . . A . . . . . TT T T . C C CA TG . A . . C G . . . . . . . . . . . CT . . . TG . . . . . . . . . . . . . A T . T . . . . C . . . . . . . . . . . . . . . . . . . . . . . . . . T . . T . . . . . . . . . . . . . . . A TAA . . C . TTTGAT . . . A . . . . . . A . . . . T . . . . . . . . . . . T . . . G . AAC . T . . . . . . . . . .
blockSeqs : . . . . . TAT . . . . . . . . . . . . T . . . . . T . . . . . . . . CACC . . . CG . . . . . . . . TA T T . C C TA CT . A . . C G . . . . . . . . . . . CT . . . TT . . . . . . . . . . . . . . G . T . . . . C . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . A GTA . . C . TTTGAT . . . C . . . . . . A . . . . T . . . . . . . . . . . T . . . . . TAA . T . . . . . . . . .
blockSeqs : . . . . . TAT . . . . . . . . T G C . G C TA T . . . . . . . . . . . . . . . . . T . . . T . . . . . . . . . . . . . . G . . . . . . T . . . . . . . . . . . . . . . . . . T ATA . . C . TTTGA . . . C . . . . . . A . . . . . . .
blockSeqs : T . . A . A T . . . . . . . . . . . . . . . . . . T . . . . . . . . . G . . . . . . . . . G . . . . TGA . .
blockSeqs : . . . . . . . . .
blockSeqs : . . . . .
blockSeqCons : GGTC*** GGGTACGTT***** A*** ** A* *** G************** ** AA*** CAAC************* ****** T**** ** ** GA********* NTAATCAG************** T** G** A* **** TT******** ** ATGTAAT************************************* ** *** ************* *** ****** *** **** ATAAC*** TT* C*********** ******* AGATA******* ACCACCA*********************** AC************ G* C* C**** TA** C**** CG** ** **** *** ** CT ** ****** ** GTT *** C*** A*** *** ACACTACCAT*********** ** ** ** AC* *** T* C******* ***** *** ATAA*** TNTGAT**************** ******** TAAC****
originalCons : AAGATGG-GTGACTTT-A-TC--GA--GCGGN-GTG-CCTATTCA-C-GACTCAGGGTAC----T---ATTGCG-AAATCGGG-AGTTTAAA-ATCC--G-C-ATTNATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------G-TTCTAAAA--------------GTGCTA--TT-C-AAA-AT--A-ATGC-ATT----CN--------A--AA------AANACAA----ACA-TAGA--TC--A--TGC--ATC-AAAGC-A--G-A------ATA-NT----A---TN----CA-G-AATC---A-T-CGTCA-G-AAT-TTGTTTC-ACGGG-C-AGCA--T-C----ATG-TAT-------T-TTCAGACATT-AAGCG--GGTTTT-C--AACACT--CA--CA----T-----------A-----------T--------------TACATTGA-TGTCTGG-AGTA-C-C-AAGGTA--CC-AAA-TG-ACA-C-TGGCATATAT-CAGAGTT-T---TT-GAAATTGTTCTCTT-C-----------AACT---TTC-CTTTCAA-C-TGCCGTTTA-A--A-ACC------AACAC---CC----GTACT-TCACGGGGA-GGCCCATAAA-C-TTGTTTACA-TTTATT-CGCT--AGACCGC-ATGTTCGAATCAAGTTTACTTTGT-AGT-CG-TCAATTAA-GA----C-------ACA-TAT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT--CACC-----A--C---------------AAAGAGA------------------AAAA----------A-AAA-----------AC-ACG-T-AGGAAAAAATG-G-GTATTCGAA-CCACAG----GTATG-CAT-TNTGGA-TTCATC--A-NTAAGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT----TCA---AG---CT--AT---TTA-A-A-GTCACCTGGCTTA-GGAC-TTAGAAATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--T-ACAAAAAAGTAAGTTTT--TTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AA-CAT--A--A-CTA--C---C--ATATTTT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG-ACCCCAC-T-C-TA---TGCGAAAT-TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-A-TT-----T-T-GT-G-CGT-T---TTTCGCGT--ATA-ACG-TCA-TTTTCAA-A----T--------T-TG--A--TTTT-T---CAATGTTCCTTTT--------ACTTG-NG--C-ACAC--AAGA--A-AAG--TTNTT-TTTGA-ACAC----TAT--GG-NCTGA-TTGT-TTT--AA-C-TAGAA-T-T--AAA-TT--T-TCCG-TTT-TCTGGGG-AGT-TTTCAATTTT--AAACCTTTG---ATATT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACC-C-ATCTTCT
finalCons : AAGATGG-GTGACTTTGGTC---GA--GCGGN-GTG-CCTATTCA-C-GACTCAGGGTACGTT-----ATTGCG-AAATCGGG-AGTTTAAA-ATCCA---C-ATTNATTTT--A-C-CTGTA-T-TTA-CAATAGATA---CA-GTACC------G-TTCTAAAAG--------------TGCTA--TT-C-AAA-ATAA---TGC-ATTCAAC-------------AA------AANACAT----ACA-TAGA--TC--A--TGC--ATC-AAAGC-AGA---------ATANTAATCAG--------------AATC---AT--CGTCAG--AAT-TTGTTTC-ACGGG-CA-GCA--T-C----ATG-TATT--------TTCAGACATT-AAGCG--GGTTTT-C--AACACT--CA--CATGTAAT-------------------------------------TACATTGA-TGTCTGG-AGTA-C-C-AAGGTA--CC-AAA-TG-ACA-C-TGGCATATAT-CAGAGTT-T---TT-GAAATTGTTCTCTT-------------AACT---TTC-CTTTCAA-C-TGCCGTTTA-A--A-ACC------AACAC---CC----GTACT-TCACGGGGA-GGCCCATAAC---TTGTTTACA-TTTATT-CGCT--AGACCGC-ATGTTCGAATCAAGTTTACTT-GT-AGT-CG-TCAATTAA-GAC-----------ACA-TAT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAAAGATA-------TTA-TA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CATACCACCA-----------------------AAAGAGA------------------AAAA----------A-AAAAC------------ACG-T-AGGAAAAAATG-GG-TATTCGAA-CCACAG----GTATG-CAT-TNTGGA-TTCATC--AC-TAAGAC----TGTCGCTATA--CGAT-TC-CGGC----CTATTCATCTC-T-TGCACG--ATAA---GG--GAA-TT----TCA---AG---CT--AT---TTA-A-A-GTCACCTGGCTT--GGAC-TTAGAAATTT------TC---T------TG--AT--A-A-T-GCG-G-CAA-AAG-TT-AT-A--T-ACAAAAAAGTAAGTTTT--TTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-AC---T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AA-CATACACTACCAT-----------ATTTT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TGAC-CCCAC-T-C-TA---TGCGAAAT-TT-TTGCTTGG-AAAA--G-TC-------AAA-TTTGC--TGTT-A-TT-----T-T-GT-G-CGT-T---TTTCGCGTATAA---CG-TCA-TTTTCAA-ATNTGAT----------------TTTT-T---CAATGTTCCTTTT--------ACTTG-NG--C-ACAC--AAGA--A-AAG--TTNTT-TTTGA-ACAC----TAT--GG-NCTGA-TTGT-TTT--AA-C-TAGAA-T-T--AAA-TT--T-TCCG-TTT-TCTGGGG-AGT-TTTCAATTTTAAC----TTTG---ATATT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACC-C-ATCTTCT
Alignments
lowQualScore : 222222 55555555555 111 111 1111111 444444444444444 11111 77777777777777777777777777777777 11 11 11111111111 22222222222222 1 11 1111 3333333333 4444444444444444444444444444444444444444 111 11111 11 111 444444444444 111 1111 222222 111 1111 1111 11 11 2 1 11 333333333333 11111 1111111 222222222222 111111 666666666666666666666666666666666666666666666666666666666666666666666 111111 1111 11 111111 1111111 2222 1111 1111 22222222222222222222222222 11 111 111 111 11111111 1111111 11 1111111111 11111111 1 11
lowQualScore : 6 333333 99 77 6 5 5 55555555555 5 3 5 5 66 55 444 77 5 5 77 5 5 000 5 7777777 5 999999999999999 2 66 5 5 5 33333 77777777777777777777777777777777 5 66 11 66 11 5 5 66666666666 77777777777777 99 5 888 0 888 5 0 5 6 5 33 66 5 0000 5 6666666666 5 4 888 3 55 2 55 8888888888888888888888888888888888888888 000 666 3 99999 00 4 4 5 4 4 22 5 0 88 444 8 8 111111111111 8 444 8 8 8 4444 8 333333 444 7777 55 8 88 0 7777 11 5 8 8 11 0 8 1 55 1 5 5 5 0 5 55 5 333333333333 4 4 5 4 66666 55 777 3333333 4 4 777777777777 4 4 000000 4 4 88888 777 8 4 4 8 55 55 4 4 4 555555555555555555555555555555555555555555555555555555555555555555555 4 4 3 3 0 2 99 66 7 7777 7 888 1 33 44 66 0 99999 9999 9999 444444 1 3 3 3 8888 666 33 3 6666 0 555 555 33 555 2 2 2 33 3 3 000000 55 2222222 55 3 3 3 3 3 3 3 3 3 3 44 3 4 99 7777 44 0 999 44 88888 3 2222 3 3 3 9999 4 55 3 8 777 4 4 44444444444444444444444444 4 8 55 33 4 4 55 4 4 999 4 444 111 0 99 000 4 55 4 55555555 3 55 3 99999 3 7 3 3 6 555 1 1111111 3 6 22 5555555555 77 99 0 33333333 88 55 3 55 88 3 55 1 3 3 7777 55 99 3 3 99 4 4 2 4 55 8 55 4 1 4 4 4 11 4 777 55 0 4 777 11 4 4 1 4 8 3 4 4 4 1 5 5 5
lowQualScore : . ...... .. .. . . . ........... . . . . .. .. ... .. . . .. . . ... . ....... . ............... . .. . . . ..... ................................ . .. .. .. .. . . ........... .............. .. . ... . ... . . . . . .. .. . .... . .......... . . ... . .. . .. ........................................ ... ... . ..... .. . . . . . .. . . .. ... . . ............ . ... . . . .... . ...... ... .... .. . .. . .... .. . . . .. . . . .. . . . . . . .. . ............ . . . . ..... .. ... ....... . . ............ . . ...... . . ..... ... . . . . .. .. . . . ..................................................................... . . . . . . .. .. . .... . ... . .. .. .. . ..... .... .... ...... . . . . .... ... .. . .... . ... ... .. ... . . . .. . . ...... .. ....... .. . . . . . . . . . . .. . . .. .... .. . ... .. ..... . .... . . . .... . .. . . ... . . .......................... . . .. .. . . .. . . ... . ... ... . .. ... . .. . ........ . .. . ..... . . . . . ... . ....... . . .. .......... .. .. . ........ .. .. . .. .. . .. . . . .... .. .. . . .. . . . . .. . .. . . . . . .. . ... .. . . ... .. . . . . . . . . . . . . .
lowQualScore : 7 222222 22 77 7 7 7 00000000000 7 6 7 7 99 99 444 99 7 7 44 7 7 000 7 1111111 7 000000000000000 5 99 0 0 0 44444 44444444444444444444444444444444 0 99 99 99 99 0 0 22222222222 66666666666666 55 0 888 0 222 0 1 0 2 0 11 99 0 6666 0 6666666666 0 4 999 6 00 0 00 3333333333333333333333333333333333333333 000 444 6 11111 66 4 4 7 4 4 00 7 8 66 000 0 0 000000000000 0 000 0 0 0 8888 0 000000 000 0000 88 0 88 8 8888 00 6 0 0 00 4 0 4 77 7 7 7 7 0 0 66 0 888888888888 4 0 7 0 66666 55 000 0000000 0 0 111111111111 0 0 888888 0 0 77777 000 0 0 0 0 55 55 0 0 0 000000000000000000000000000000000000000000000000000000000000000000000 0 0 6 6 5 3 00 55 3 7777 3 555 0 44 66 22 3 33333 9999 2222 888888 3 3 3 6 9999 444 88 1 5555 7 444 444 99 000 9 9 9 77 6 6 555555 00 5555555 00 3 3 3 6 6 6 6 6 6 3 66 3 5 00 2222 66 3 222 66 33333 3 2222 6 6 6 6666 4 00 6 0 000 0 0 55555555555555555555555555 0 0 55 55 0 0 55 0 0 888 0 666 000 5 77 333 0 55 0 55555555 6 00 6 11111 6 3 6 6 7 888 7 9999999 3 7 66 6666666666 99 22 7 22222222 33 00 6 00 66 6 00 0 6 6 7777 00 55 6 6 55 0 0 0 0 55 0 55 0 2 0 0 0 33 0 000 55 8 0 000 66 0 0 6 0 0 4 0 0 0 9 0 0 0
consensus : AAGATGG-GTGACTTTNATC--GA--GCGGN-GTG-CCTATTCA-C-GACTCAGGGTAC-G-T-ATTGCG-AAATCGGG-AGTTTAAA-ATCCG-C-ATTN--ATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------GTT-CTAAAA--------------GTGCTAT--T-C-AAA-AT--A-ATGCATT--C------A-A------C--AA---AANAC-ATACA-TAGA--TC--A--TGC--ATC-AAAGC-A--G-A------ATA-NT---AA---T--CA-GAA-TC---AT-CGTCA-G-AAT-TTGTTTCA-CGGG-CA-GCA--T-C----ATG-TAT-------T-TTCAGACATT-AAGCG--GGTTTT-C--AACACT--C----A--------C------AT----GT--A-A-------TTACATTG---AT---GTCTGG-AGTA-C-C-AAGGTA--CCAAA-TG-ACA-C-TGGCATATAT-CAGAGTT-T---TT-GAAATTGT-TCTCTT------------AA-CT---TTC-CTTTCAA-C-TGCCGTTTA-A--A-ACC------AACAC---CC----GTACT-TCACGGGGA-GGCCCATAA--CT--TGTTTACA-TTTATT-CGCT--AGACCGC-ATGTTCGAATCAAGTTTA-CTT-GT-AGT-CG-TCAATTAA-GA----C-------ACA-TAT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT-ACC-ACC-------------AA--A-AGAG------------------AAA--------A-------A--------A-AAAAC-ACG-T-AGGAAAAAATG-G-GTATTCGAA-CCACAG----GTATG-CAT-TNTGGA-TTCATC--A-NTAAGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT----TCA---AG---CT--AT---TTA-A-A-GTCACCTGGCT-T-GGAC-TTAGAAATTT------TC--T------TG--ATA-A-T-GC-G-G-CAA-AAG-TT-AT-A--T-ACAAAAAAGTAAG-TTT--TTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AACATAC-A-CTA--C---C-------ATATTTT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG-ACCCCAC-T-C-TA---TGCGAAAT-TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-ATT-----T-T-GT-G-CGT-T---TTTCGCGT--ATA-ACG-TCA-TTTTCAAA-T-------NTG--ATTTTTT--CAATGTTCCTTTT--------ACTTG-NG--C-ACAC--AAGA--A-AAG--TTNTT-TTTGA-ACAC----TAT--GG-NCTGA-TTGT-TTT--AA-C-TAGAA-T-T--AAA-TT--T-TCCG-TTT-TCTGGGG-AGT-TTTCAA-TTTT---AA--CTT-TG---ATATT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACC-C-ATCTTCT
Reference ( family-1676 ) : AAGATGG-GTGACTTTGGTC--GA--GCGGN-GTG-CCTATTCA-C-GACTCAGGGTAC-GTT-ATTGCG-AAATCGGG-AGTTTAAA-ATCCA-C-ATTN--ATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------GTT-CTAAAA--------------GTGCTAT--T-C-AAA-AT--A-ATGCATT--C------A-A------C--AA---AANAC-ATACA-TAGA--TC--A--TGC--ATC-AAAGC-A--G-A------ATA-NT---AA---T--CA-GAA-TC---AT-CGTCA-G-AAT-TTGTTTCA-CGGG-CA-GCA--T-C----ATG-TAT-------T-TTCAGACATT-AAGCG--GGTTTT-C--AACACT--C----A--------C------AT----GT--A-A-------TTACATTG---AT---GTCTGG-AGTA-C-C-AAGGTA--CCAAA-TG-ACA-C-TGGCATATAT-CAGAGTT-T---TT-GAAATTGT-TCTCTT------------AA-CT---TTC-CTTTCAA-C-TGCCGTTTA-A--A-ACC------AACAC---CC----GTACT-TCACGGGGA-GGCCCATAA--CT--TGTTTACA-TTTATT-CGCT--AGACCGC-ATGTTCGAATCAAGTTTA-CTT-GT-AGT-CG-TCAATTAA-GA----C-------ACA-TAT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT-ACC-ACC-------------AA--A-AGAG------------------AAA--------A-------A--------A-AAAAC-ACG-T-AGGAAAAAATG-G-GTATTCGAA-CCACAG----GTATG-CAT-TNTGGA-TTCATC--A-CTAAGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT----TCA---AG---CT--AT---TTA-A-A-GTCACCTGGCT-T-GGAC-TTAGAAATTT------TC--T------TG--ATA-A-T-GC-G-G-CAA-AAG-TT-AT-A--T-ACAAAAAAGTAAGTTTT--TTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AACATAC-A-CTA--C---C-------ATATTTT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG-ACCCCAC-T-C-TA---TGCGAAAT-TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-ATT-----T-T-GT-G-CGT-T---TTTCGCGT--ATA-ACG-TCA-TTTTCAAA-T-------NTG--ATTTTTT--CAATGTTCCTTTT--------ACTTG-NG--C-ACAC--AAGA--A-AAG--TTNTT-TTTGA-ACAC----TAT--GG-NCTGA-TTGT-TTT--AA-C-TAGAA-T-T--AAA-TT--T-TCCG-TTT-TCTGGGG-AGT-TTTCAA-TTTT---AA--CTT-TG---ATATT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACC-C-ATCTTCT
gi|1 : TTCA-C-GACTCA------------TTGCG-AAATTGGGGAGTTTAAA-ATTCT-C-GCTATGATTTTTAA-CATTGTTATGTTA-CAATAGATATTACA-GTACG------GTTTCTAAAA---------------TGCTATCTT-C-AAA-AT--ACATGCAATGCC------A-AATACTAT--AATATAAAA--ATACA-TAGAGTTCT-A--TAC--ATC-AAAGC-A--G-A-------TA-TTTTTAA---TG-CA-GAAATC---ATTCGTCATA-AAT-TTGTTTCAACGGG-CAAGCA--T-TGCTAATG-TAC--------------ATATT-AAA-G--TGTTTC-CCAAATACC--CCCATA--------T------AT----GC--A-A-------TTACATTG---GT---GT-TGGCAGTACC-C-AAGGTAACCTTAA-TG-ACA-C-TAGGATATA
gi|1 : tttggcaaacaataagctttcttaatGAATCCATTTTGGCAT-GT-GTT-CG-TCA-TTAA-GA----CTATCGATACAATGTATTA-TTGGTAGA---A-AT--A-C---GTAAGGATCATAAT-GG-CAAAA---A-GACTCT-TTA-TA-A-T----G--T-A---A-G---TTTTA-GAATTAA-A--T--TTCAT-ACC-ACCCTTATACAGTG--AG--A-AAAA------------------AAA--------ATTATTTTA--------A-AAATT-ACG-T-AGCAAAATGTG-GCGTATTCGAATCCACAG----GTATG-CAT-ATTGAA-TTCATC--ATTTAGGA--CT-TGTCGCTA------AT-TC-----------ATTTTTCTC-G-TG----A-ATAA---AGTCGAA-TTGGGGTCATTTAG---TTAAAA---TTA-A-A-GTCACGTGGTA-T-GGACTTTAGAAATTTATTTCCTT--T------TG--ATA-ATT-GC-G-GCCAA-AGG-TT-AT-ATTT-ACATAAAAGTAAAGTTT--TTTGTTCAAATTAGAGTGGG-C--AA-----GTCGTCAT-ATTC-T-TTTA-TTT-TTATCTAAAACAT--T-TTAACTAGACATTG-GACATAC-T-CTA--C---C-------ATATTTC-T-T-TCAGTGTTTAGCTA-A-TAAGGAGA-CT-TG-A-CCCACAT-C-TATTTTGCCAAATATT-GTGCTTGG-AAAA--G-TAATATCC-AAA-TTTA---TCTT-ATTTATTAT-T-GT-G-CGTATTAATTTCGCGTTAATA-CCG-TC---TTTTAAA-TANNNNNNNNN--NNNNNNN--NNNNNNNNNTTTTAAAATATGATTTT-TT--CAATGT--AAGA--A-AAG--CTTTT-TTTGA-ACAC----TAT--GG-ATTGA-TTGT-TGT--AA-C-TAGAA-TCT--AAA-TT--T-TCTG-TTT-CCTGGGG-AGT-TTT-AA-TTTT---AA--CTT-TG---ATATT-TG-TCCCTC-TG-TGGGAACTC-CGCT-C-GATAAAG-TCACT-C-ATCTTCatgcgccgcagccaccgaacaagtacgtgatgctgggtggccgcatttgcattgactcaataccattccacagtaaaactatgtggtgaaatatgttttatcccacaagttgtaaacgagttttgtctttgttgtgtcgatattgtggaatccattttggcatgtgttcgtcattaagactatcgatacaatgtattattggtagaaatacgtaaggatcataatggcaaaaagactctttataatgtaagttttagaattaaatttcataccacccttatacagtgagaaaaaaaaattattttaaaaattacgtagcaaaatgtggcgtattcgaatccacaggtatgcatattgaattcatcatttaggacttgtcgctaattcatttttctcgtgaataaagtcgaattggggtcatttagttaaaattaaagtcacgtggtatggactttagaaatttatttccttttgataattgcggccaaaggttatatttacataaaagtaaagttttttgttcaaattagagtgggcaagtcgtcatattcttttatttttatctaaaacattttaactagacattggacatactctaccatatttctttcagtgtttagctaataaggagacttgacccacatctattttgccaaatattgtgcttggaaaagtaatatccaaatttatcttatttattattgtgcgtattaatttcgcgttaataccgtcttttaaatannnnnnnnnnnnnnnnnnnnnnnnnttttaaaatatgattttttcaatgtaagaaaagctttttttgaacactatggattgattgttgtaactagaatctaaattttctgtttcctggggagttttaattttaactttgatatttgtccctctgtgggaactccgctcgataaagtcactcatcttc
gi|10 : tttggcaaacaataagctttcttaatttcacgactcattgcgaaattggggagtttaaaattctcgctatgatttttaacattgttatgttacaatagatattacagtacggtttctaaaatgctatcttcaaaatacatgcaatgccaaatactataatataaaaatacatagagttctatacatcaaagcagatatttttaatgcagaaatcattcgtcataaatttgtttcaacgggcaagcattgctaatgtacatattaaagtgtttcccaaatacccccatatatgcaattacattggtgttggcagtacccaaggtaaccttaatgacactaggatataatgcgccgcagccaccgaacaagtacgtgatgctgggtggccgcatttgcattgactcaataccattccacagtaaaactatgtggtgaaatatgttttatcccacaagttgtaaacgagttttgtctttgttgtgtcgatattgtgAAGATGG-GTGACTTTA--T--GA--GCGGA-GTG-CCTATTCA-C-GACTCAGGGTAC-G---ATTGCG-AA-TCGGG-AGTTTAAA-ATCCG-C-ATTC--ATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------GTT-CTAAAA---------------TGCTAT--T-C-AAA-AT--A-ATGCATT---------------------AA---AAAAA-ATACA-TAGA--TC--A--TGC--ATC--AAGC-AAGA-A------ATA-TT---AA---T--CA-GAA-TC---AT-CGTCA-G-AAT-TTGTTTCA-C-AG-C--GCA--T-C----ATG-TA--------T-TTCAGACATT-AAGC---GGTTTT-C--AACACT--C----A--------C------A------T--A-A-------TTACATTG---AT---GTCTGG-ACTACC-C-AAGGTA--CCAAA-TG-ACA-C-T-GCATATAT-
gi|11 : gT--GT---TTA-AGA-TTCACCTGGTA-T-GGAC-TTAAAAATTT------TC--T------TG--ATA-A-T-AT-G-G-CAC-AAC-TT-AT-A--T-ACAAAAGA-TCAG--CT--TTGTTTCA---TAGAGTGGATTCAAA-----GTTCTTAT-A--CGT-TTTATTTT-AC----AAAATATTCT-TT-A----ACA-TGAAACATACAA-ATA--C---T-------ATATTTT-GACGTCA--GTTTA--CAGA-T--GGAGA-CT-TG-A-CCCAC-TAC-TA---TGTGAAA--TT-GTGCTTGG-AAAA--A-T--------AAA-TCTGCCTTGTT-ATT-----T-TAGT-G-CGT-T---TTTCGAGT--ATA-ACG-TCA-TTTT--AA-T-------GTG--ATTTTTT--CAATGTTCCTTTT--------ACTTG-AG----ACAC--AAAA--A-AAG--CTTTT-AATGA-ACACCAAATAT--GG-ATTGA-TTGT-TGT--AA-CTTAGAT-T-T--AAA-TT--T-TCTG-TTT-TCT-TGG-AGT-TTC--A-TTTT----A--CTT-TG---ATATTCTG-T-CCTC-TG-TGGGCACTC-CACT-C-GATAAAGTTCACC-C-ATCTTgcgcgcaacaccctacagtacgtgccccgcatttgcactgacaaaaccaaccacaaatacttgtaggcgaatattttacccacaggttgtaaagcgttttgctagtgtatcgagattggatttttgcatgaagtaaattaggctccatctcggacacgtcaatgtggtactgtccattctgaagatgctctgcaacataagaatttgcttg
gi|12 : actaAAGATGG-GTGATTTTGG-C--GA--ACAAT-ATG-CCTATTCA-C-GATTCA------------TTGCG-AAG-AGGG-AGTTTAAA-ATCCG-C-ATTG--ATTTT--A-C-CTGT-AT-TTA-CAATAGATA---CA-GTACC------GTT-CTAAAA---------------TGCTAT--T-C-AAA-AT--GTATGCATT--C------A-AC-----C--AA---AAAACAATACA-TAGA--TC--A--TAC--ATC-AAAGC-A--G-A------ATATCT---AA---T--CA-GAA-TC---AT-CGTCA-G-AAT-TTGTTTCA-CGGG-CA-GCA--T-C----ATG-TACATATGTAT-TTCAGACATT-AAGC---GGTTTT-C--AACACA--C----ACACACAATC------AT----GT--A-A-------TTACATTG---AT---GTCTGG-ACTA-C-C-A
gi|13 : ag--GAA-TT----TCA---AG---CT--AA---TTA-A-A-GTTACCTGGCG-T-GGAC-AAAGACATTT------TC--T------TG--ATA-A-T-GC-G-G-CAA-ACG-AT-AT-A--T-AC-AAAAAGTAAG--GT--TTGTTTCA---TAGAGTGGGTC--AT-----GTCTCTAC-A--C-T-TTTA-TTT-AC----AAGACAT--T-TT-AC---ACA-AG-AACATAC-A-CTAGTCTAAC-------ATA-TTT-TAC-TCA--GTTCA--CA-A-T--GGTCA-CT-TG-A-CCCAC-T-C-CA---TACGAAA--TT-TTGCTTTG-AAAG--G-T------C-AAA-TTTGC--TGTT-ATT-----T-T-GC-G-CGT-T---TTTCACGT------GCG---A-TTTT-GAA-G-------ATG--ATTTTAT--CA
gi|14 : -TTTGT--TGTTGATT-----T-T-TT-AACGT-T------CGTGT--ATA--TG-ACA-TTT-CAAA---------AGG--ATTTTTTTTCAAAGTCTCTGTC--------AATTA-AG--C-ACATCTAAAATTA-AA-----CCT-TTTGA-AAAC----TATATGG-ATTGG-TTGT-TTC--GA-T-CAGGA-T-G--CAT-TTGTT-TCCA-TTT-TCTTG---AGTGTTTCAA-TTT----AA--CTT-CA---ATATA-TG-TCCCTC-TG-TGGGCTCTC-GGCT-C-AATAAtataattttatttcacgt
gi|15 : CG-T-AGCAAAA--TGTG-GTATTCGAA-CCACAG----GTATG-CAT-ATTGAA-TTCATC--A-TTAGGA--C--TGTCGCTAT-T-CGAT-CT-CGG-----CTATTCATCTC-G-TGAAT----TAA---AGTCGAA-TT----TCA---AG---TT--AT---TTA-A-A-GTCACC
gi|16 : -TGT-TTA-TTCGTA------------GC---ATAA-------AAT-TC-CAGAA---G-AA---T-TGA-AA-A-T----G-GT-A---T-GTTTTTT-ATGAGT-AAGA--TTAT-CAT-A---ACC-------------AACCA-AGAA------------------AAA--------A-------A--------ATAGAAT-AAA-C-AAAAAAAAA
gi|17 : ctAA--------------ATG-TAT--T-C-AAA-ATGTA-TTGCATT--CTCAAA-A-A------CCAAA---AACAC-ATACA-TAGA--TC--ACTTAC--ATC-AAAGC-AC-G-A------ATA-TT---TA---T--CA-AAA-TC---A--CGTCA-G-AAT-TTGCTTCA-CAGG-CA-Gacaaacagaaacacgt
gi|18 : A-A-C-AC-G-T-CAA-AAG-TT-GT-A--T-ATAAAA--GTAA--TTT--TTCTTTCA---TAGAGTGGGTC--AA-----GTTTCCAT-A--gca
gi|19 : tggcgcagaactaacctttcctattcatcaTATTCAAA-CCACAG----GTATG-CAT-ATTGGA-CTCACC--A-TTTGGC--T--TGTCTCTAT-A-CGAT-CT-CGG-----CTATTCATCTT-T-TGGA----ACAT---GGTCGAA-TT----ACA---AT---CT--AT---TTA-A-A-GTCACtgatattttcctcagtttaca
gi|2 : AAGATGGCGTG--TTTAATC--GATTGCGAC-GTG-CCTATTCA-CTGACTCAGGGTAC-TCTGATTTCG-AAATTCGG-AGTTTTATTCTCCGTC-ATGC--ATTT---A-C--TGT-AT-TTATCAATAAATA---CATGTATCCTATTTGTT-CTAAAATGCCTTACTGGTTGGTG-TAT--TTC-AAA-A---A-ATACATC--CGCATGAA-A------A--AA---AAGAT-ACACACTAGA--TCTTA--TGCG-ATC-AA-GC-A--GGA------ATA-CTGT-AA---TTCCATGAA-TTCATAT-CGTCA-GTAATCTTGTTTCA-CAGGTCC-GCA--TGC----ATGGTAT-------T-TCAGGACATTGAAGCGACGTTTTT-C--AACACT--C----CGT------C------AT----GT--A-A-------TTACATTGA--AT---GTCTGG-AGTA--------ATC--CTGAT-TGCATAGT-TGGCTTCTAT----ACTT-TATCTT-GAAGTAAC-TTCCTTTAGAGTTTTTGAAA-TTTGTTTCTCTTGCAA-C-TTTCCTTTC-A--ATGCCGTTTACAACACACACCACTCGTACTCTCAC-GGGA-GGCCC-T-A--CT--TG-TTACATTTTATT-CACT--AG-CCGT-ATGTT-GAATC-AGTTAA-CTT-GT-AGT-CGTTCA--TAA-GA----CAT-----ACA-TAT-TTT-TTCGTAAG---C-TT--AGCAAAATAA-------AAT-GCTCAAAA---A-GA---TATTA-TACACT----G-GT-A---C-G---TTT-A-AAAT-AAGA--T--C-CAT-ACCAACCAAACGAGAGAGAAAA--A-AGAG------------------AAA--------G-------A--------A-AAAAC-ACGAT-AGG-GAAAAT--G-GTATTCGAA---ACAGGACAGTATG-CAT-T-TGGA-TCAATCCAG-CTAAGA--C---GTCGCAAA-ACCGAC-T--CGGCTAGGTCATT-ATCT--T-TGCAC-GTATAACATGG--GAATTT----TTA---AG---CT--AT---TT--A-A-GTC-CCT-GCT-T-GGAC-TTAGAAATTT------TC--T------TG--ATATA-TGGC-GTG-CAA-AAG-TT-AT-A--T-AC--AAATGTAAG--CT--TTTTTTCA---TAGAGT-GGTC--AA-----GTCTCCAT-AT-C-TGTTTA-TTT-ATA---AATACAT--TGTTAAC---AC--TG-AAC---C-A-TTA--T---CAATCCGGATATTTT-ACC-TCG--G-TTA--CA-A-T--GGAGA-CTCTGTACCGCAC-T-C-TA---TTGGAAAT-TT-GTGCTTGGTAAAA--G-T--------AAA-TTTGC--TG-T-ATT-----TCT-GT-G-CGTCT---TTCCGCGT--ACA-AAG-TCATTTTTCAAATT-------CTGGAATTTTTT--C-ATGTTTCTTTT--------ACTTGCTG--C-ACAC--AAGA--C-AAG--TTATT-TTTGA-ACAC----TAT--GGTCCTAA-TTGTAGTT--AATC-TAGAA-T-TTAAAA-TT--T-TCTGTTTT-TCTGGGG-GAG-TTTCAA-TTTTTAAAA--C-T-TGAATATATT-TGTTTCCTCTTGCTGGGCACTC-CGCT-CTGATAAAG-TCACC-CAATCT
gi|20 : aagGT-T---TTTCGCGT--ATA--CG-TCA-TTTT-AAA-T-------ATG--CCTTTTT--CAAGGTTCCTTTT--------ACTTG-AG--C-ACAC--AAGA--G-AAG--TTTTT-AATGA-ACAT----TAT--GG-ATTGA-TTGT-Tctttg
gi|21 : T-A--T-ACAAAA-AGTAAG---T--TTTTTTCA---TAGA------C--AAACAATGT-TTCGC-A--C-T-TTTA-TTT-AC----GAAACAT--T-Tg
gi|22 : AA-TT----TCA---AG---CT--ATCCATTT-A-A-GTCACCCGACG-T-GAAC-TTAGAAATTT------TT--TTTTTGGTG--ATA-A-T-gta
gi|23 : TGGA-CTCATC--A-CTAAGA--C--TGTCGCTAA-A-CGAGATC-TG------CTATTCATCTC-T-T
gi|24 : --GGTTTT-C--AATACC--C----A--------C------ATACATGC--A-A-------TTACATTG---GT---GTCTGG-A
gi|3 : aagtAAGATGG--TGACTTTTATC--GA--GCGGA-GTGGCCTATTCA-C-AACTCAGGGTACCGTT-ATTGCGGAAATCGGG-AGTTTAAA-ATCCA-CCATTC--ATTTT--AAC-CTGT-TT-TTA-CAATAGATA---CA-GTAC-------GTT-CTAAAAAG------------GTGCTAT--T-C-CAA-AT--A-ATGCATT--T------T-A---------AT---AATAT-AAACA-TAGA--TC--A--TGC--ATC-AAAAC-A--G-A------ATA-AC---AT---A--CA--AA-TC---ATTCGTCA-G-AAT-TGTTTTCA-CAGG-C--GCA--T-C----ATG-TAT-------T-TTC-GACATT-AAGCG--GGTTTTTC--AA-ACT--C----A--------C-------------T--A---------TTACATTG---AT---GTCTGG-AGTA-C---AAGGTA--CCAAA-TG-ACA-C-TAGCATATAT-CAGAGTGGT---TT-GAAATTGT-TCTCTT------------AAACT---TTC-CTTTCAAAC-TGCCGTTTA-A--A-ACC------AACAC---CC----GTA-T-TCACGGGGA-GGCCCATAAAACT--T--TTACA-TTTATC-AGCTTTAG-CCGCTATGTTCGAATCAAGTTTA-CTTTGTTAGT-CG-TCAATTAA-AG----C-------ACA-TAT-TTAATTCGTAAA---C-TT--AGC---ATAA---------T-GC-CAAAG----------T-TTA-TA-A------G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CATCACC-AC---------------A--A-AGAG------------------AAA--------A-------A--------A-AAAACGACG-T-AGGAAAAAATG-G-GTATTCGAA-C-ACAG----GTATA-CAT-TATGTACTTCATC--A-ATATGA--C--TGTCGCTAT-A-CGAT-TC-CGGC----CTATTC-TCTC-T-TGCA--G-ATAA---GG--GAA-TT----TAC---AG---CT--AT---TTA-A-A-GTTACCTGGCT-TAGGAC-TTAGAA-TTT------TC--T------TGTTATA-A-T-GC-G-G-CAA-AAGGTT-AT-A--T-ACAAAAAAGTAAATTTTTTTTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAAACAT--T-TT-AC---ACA-TG-AACATA--A-CTA--C---C-------TGATTTTATAC-TCA--GCTTA--CA-ATT--GGAAA-CT-TG-ACCCCAC-T-C-TA---TGTGAAAT-TT-TTGCTTGG-AAAAATG-T------CAAAA-TTTGC--TGTT-ATT-----T-T-GT-G-ATA-T---TATCGCGT--ATA-ACGTTCATTTTTCAAA-T-------TTG--A-TTTTT--CAATGTTCCTTTT--------ACTTG-CGCTC-ACAC--AA-A--A-AAG--TTATT-TTTGACACAC----TAT--GG-TCTGATTTGT-TTTA-AA-C-TGGAA-T-T--AAA-TT--T-TCTG-TTT-TCTGGGG-AGT-ATACAA-TTTT---AAACTTT-TG---ATATT-TG-T-CCTC-TG-TGGGCACTC-CGCT-C-GATAAAG-TCACCTC-ATCTTCT
gi|4 : AAGATGG-GTGATTTTGG-C--GA--ACAAT-ATG-CCTTTGCAAC-GACTCA---------T-AT-GCG-A--TCGGG-AGTTTAAA-ATCCA-T--TTG--ATATT--A-C-CTGT-AT-TTA-CAATAGATA---CG-GTACC------GTT-C-AAAT--------------ATGCTAT--T-C-AAATAT--T-ATGCATT--C------ACG------CCAAA---AACACAATACA-T-GG--TC--A--TACAAATCAAAAGCTA--G-AGTAGTCATA-AT---AAGGTC--CA-GAA-TC---AT-CGTCA---AAT-TTGCTTCA-CAGG-CA-GCGATT-C----ATG-CATATTATA-T-TTCAGA-ATT-AAGCG--TG-TTT-C--AACACTTGC----A--------C------AT----GT--ACAATGTAATTTACATTG---GA---GTCTGG-ACTA-T-C-CAAGTA--CAAAA-CA-A-G-T-GGGCATATAT-
gi|4 : GT-CG--CAATTAA-GA----CT------ACA-TAA-TTA-AAGGTAAA---GATT--AGC---ATAA-------AATTGC-CAAAATTAA-GA----AT-A-TA-A-T----CTGT-AGACTAG---TTT-A--AAT-AA-A--T--T-CAT-ACC-ACC-------------AA--AGAGAA------------------AAATATAATTAA-------A--------A-AAAAT-ACG-T-AG---AAAATT-G-GTATTCGAA-CCACAG----AGATA-CATGTACAGA-CTCATC--A-TAAAGA--CAATATCGCTTC-A------TC-TAGG----CTGTTTATCTC-TGTGAGA-A-ATGC---TG--AAA-TA----TCA---AGAAACT--AT---TTA-A-AAGTCACCTGTAT-T-GGAC-TTAAAAATTT------TCCTT------TG--AAA-C-T-GC-G-G-CAA-A----T-CTGA--T-ACAAAAAGGTAAGTTTT--TT----CA---TA-AGTGGGTC--A------GTCTCCAT-A--AAT-TTTA-TTTTACA---AAA-CAT--T-TT-AC---ATA-TG-AACATAC-AACTA--C---C-------A-ATATT-TAC-TCA--GTTTA--CA-A-T--GGAGA-CT-TG---CCCAC-T-C-TAT--TGCGAAAT-TG-T--CTTGG-AAAG--GTT------C-AAA-TTTAC--T-TT-ATT-----T-T-G--G-C-T-T---TATCGCG----TA-ACG-T-A-TTTTCTAA-T-------ATG--ATTTTTT--CAATGTTCCTTTT--------ACT---GG--T-ACAC--AAG---A-AAG--CTTTT-TTTCG-ACAC----TAT--G-----GA-TTGG-TTT--AA-C-TAGAA-T-C--TAA-TG--T-TCCG-TTTGTATTAGG-AGA-TTTCAA-TTTA---AC--CTT-TG---ATA-T-TG-TCCCTC-T--TGGTCACTC-CGCT-C--ATAAAG-TCACA-C-ATCTTCgcgcgcagcacttaaacagtacggctcgcatttgctattgacaaaaccaatcacaaaataattgtagggtgaaattaccacaagttgtaatgattttagctttgtgtgtcagagattgaaattttgccattgtcgcaattaagactacataattaaaggtaaagattagcataaaattgccaaaattaagaatataatctgtagactagtttaaataaattcataccaccaaagagaaaaatataattaaaaaaaatacgtagaaaattggtattcgaaccacagagatacatgtacagactcatcataaagacaatatcgcttcatctaggctgtttatctctgtgagaaatgctgaaatatcaagaaactatttaaaagtcacctgtattggacttaaaaattttcctttgaaactgcggcaaatctgatacaaaaaggtaagttttttcataagtgggtcagtctccataaattttattttacaaaacattttacatatgaacatacaactaccaatatttactcagtttacaatggagacttgcccactctattgcgaaattgtcttggaaaggttcaaatttactttattttggctttatcgcgtaacgtattttctaatatgattttttcaatgttccttttactggtacacaagaaagctttttttcgacactatggattggtttaactagaatctaatgttccgtttgtattaggagatttcaatttaacctttgatattgtccctcttggtcactccgctcataaagtcacacatcttc
gi|5 : aagatgggtgattttggcgaacaatatgcctttgcaacgactcatatgcgatcgggagtttaaaatccatttgatattacctgtatttacaatagatacggtaccgttcaaatatgctattcaaatattatgcattcacgccaaaaacacaatacatggtcatacaaatcaaaagctagagtagtcataataaggtccagaatcatcgtcaaatttgcttcacaggcagcgattcatgcatattatatttcagaattaagcgtgtttcaacacttgcacatgtacaatgtaatttacattggagtctggactatccaagtacaaaacaagtgggcatatatgcgcgcagcacttaaacagtacggctcgcatttgctattgacaaaaccaatcacaaaataattgtagggtgaaattaccacaagttgtaatgattttagctttgtgtgtcagagattgaaattttgccattCG--T-C----AT---AT-------TATTCAGACATT--AGCT--GGTTTT-C---ACACT--C----A--------CAACACTAT----GTCAA-A-------TTAGATTGTAAATTGAGTCTGG-AGCA-CTC-GAAGTAC-CCAAA-TG-AAC-C-TGGC-TAT
gi|5 : gagtAATTTTG-CAT-GT-GGTTCG-TCA-TTAA-GAATGAC-------A-A-TAT-T-A-TT-GTAAAAAGT-TTGCAGT---AGAA-------ACT-GC-CAAAA-----GA----GTTA-TA-A-TTGGCG-GTTA---A-G---TTT-A-GAAT-AG-AATT--T-TAT-ACC-AAC-------------CA--A-AGAG------------------AAA--------A-------ACAAAATTAG-AAAAT-ACG-TCAGGATAA--TT-G-GTATT-GAA-CCACAG----GTATAACAT-GTTGGA-T-CATC--A-TTAGGAACT--TGTCGTTAT-AGCGAA-TG-CGGC----CT-TTTATCCC-T----AA-G-ATAA------------T----ACA---CG------------------A-ATTACCTTGTTAT-GGAC-TTAGAAATTT------TC--T------GG--ATA-A-T-GCGG-G-CAAGAAG-TT-AT----T-A-GAAAAAG--AG------TTTTTTCA---TCGAG-GGTCC--AA-----GTTTCCAT-AT-C-T-TTTT-ATT-AC----AAAACAT--T-TT-AC---AAA-TG-AACACA--A-CTA--C---C-------ATA-TTT-TACTTCA--GTTTAG-CA-A-T--GGAGA-CT-TG---CCCAC-T-C-TA---TGCGAAAT-TTGGTGCT--G-GAAA--G-T------C-AAATTTTAC--TGTT-A-G-----T-T-GT-G-CGT-T---TTTTGCGT---TACGCA-TCA-TTTT-AAA-TA------TTG--ATTTTTTTCTAATGTTCTTGTT--------ACTTG-AG--C-A-AC--AAGAT-ATAAGCTTTCTG-TTGGA-ACAC----TAT--GG-ATTGA-TTGT-TTTGCAA-C-TAGAA-T-T--TAA-TT--TCTCCG-TTT-TCTGGAG-AGTATTTCA---TTT---AA--CTTGTG---ATA-G-TG-TCCCTT-TG-T-GGC-CTT-TGCT-C-GAgcgcgcaacctccgggattttctaggtacgtgtattgacaaagccacacaattactgtgtaggtgaaattttaccagcaagttgcatgatgagttttgcttgtgtgtctagatggaattttgcatgtggttcgtcattaagaatgacaatattattgtaaaaagtttgcagtagaaactgccaaaagagttataattggcggttaagtttagaatagaattttataccaaccaaagagaaaaacaaaattagaaaatacgtcaggataattggtattgaaccacaggtataacatgttggatcatcattaggaacttgtcgttatagcgaatgcggccttttatccctaagataatacacgaattaccttgttatggacttagaaattttctggataatgcgggcaagaagttattagaaaaagagttttttcatcgagggtccaagtttccatatctttttattacaaaacattttacaaatgaacacaactaccatattttacttcagtttagcaatggagacttgcccactctatgcgaaatttggtgctggaaagtcaaattttactgttagttgtgcgttttttgcgttacgcatcattttaaatattgatttttttctaatgttcttgttacttgagcaacaagatataagctttctgttggaacactatggattgattgttttgcaactagaatttaatttctccgttttctggagagtatttcatttaacttgtgatagtgtccctttgtggcctttgctcga
gi|6 : gagtcgtcatattattcagacattagctggttttcacactcacaacactatgtcaaattagattgtaaattgagtctggagcactcgaagtacccaaatgaacctggctatgcgcgcaacctccgggattttctaggtacgtgtattgacaaagccacacaattactgtgtaggtgaaattttaccagcaagttgcatgatgagttttgcttgtgtgtctagatgg-AAGCG--G-TTTT-C--AACACT--C----A--------C-------T-----T--A-A-------TTACATTG---AT---GT-TGG-AGTA-C-CCAAGGTA--CCAAAATG-ACA-C-TG-CATATAG-CAGAGTT-T---TTTGAAATTGTCTCTTTC------------AA-CT---TTC-CTTTCAA-C-TGCCGTTTA-C--A-ACA------AACAC---CC----GTACT-TCACGGAAA-GCCCCAATA--CT--TGTTTACA-TTTATTTCACT--AAACCGC-ATGTTCGAATCAAGTT-A-CTT-GT-AGT-CG-TTCATTAAAGA----C-------TAA-TAT-T-A-TTCGTAAA---A-TT--AGC---ATAA-------AA--GC-CAAAA---AAGA---TATTA-TA-A-T----G-G--A---T-G---TTT-A-GAAT-AA-A--T--T-CAT-GCC-ATC-------------AA-------G------------------AAA--------A-------A--------A-AAAAC-ACG-T-AGGAAAAAATG-G-TAATTCGA--CCACAG----GTATAACAT-TATGTA-TTCATC--A-CTAAGA--C--TGTCGCTATTA-CGAT-TCTCGGC-----TATTCATCTCGT-TGCACCG-ATAA---GG--GAA-TT----TTA---AG---CT--AG---TTA-A-A-GTCACCTGGCT-T-CGAC-TTA-AAATTT------TC--T-------G--ATA-A-T-GC-G-G-CAA-AAG-TT-AT-A--TGACAAAA---TA--TTTT--TATTTTCA---TAGAGTGGGTC--AA-----GTCTCCATTA--C-T-TTTA-TTT-ACA---AAA-CAT--T-T--AC---ACA-TG-AA---------------------------ATTT---AC-TCA--GTTTAT-CA-A-T--GGAG--CT-TG-ACCC-AC-T----A---TGTGAAAT-TT-T-GCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-ATT-----T-T-GTGG-CGT-T---TATCG-GC--GTG-ACG-TCA-TTTTC-AA-T-------TTGA-ATTTTTT--CAATGTT-CTTTT--------ACTTGCTG--C-ACAC---AGA--A-AAG--TTA-T-TTTGA-ACAC----TAT--GG-TCTGA-TTGT-TTT--AA-C-TAGAATT-T--AAACTT--T-TCTG-TTT-TCTGGGGAAGT-TTTCAATTTTT---AA--CTT-TG---AT-TT-TG-TCCCTC-TGCTGGGCACT--CGCTCC-GAT-TAG-TCACC-C-ATCTTCT
gi|7 : --GGTTTT-C--AACACT--C----A--------C-------------T--A-A-------TTACATTG---AT---GTCTGG-AGTA-C-CCAAGGTA--CCAAA-TG-ACA-C-TG-CATATAG-CAGAGTT-T---TT-GAAATTGT-TCTTTC------------AA-CT---TTC-CTTTCAA-CCTGCCGTTTA-ACAA-AAC------ACAAC---CC----GTACT-TCACGGAG--GCCCCATA---CT--TGTTTACA-TTTATT-CACT--AAACCGC-ATGTTCGAATCAG--TTA-CTT-GT-AGTTCG-TCA-TTAA-GA----CT------ACA-TAT-T-A-TTCGTAAAA--C-TT--AGC---ATAA-------AAA-GC-CAAAA---A-GA---TATTAATA-A-T----G-GT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT-GCC-ATC-------------AA--G-A-----------------------A--------A-------A--------A-AAAAC-ACG-T-AGGAAAAAATG-G--TATTCGAAACCACAG----GTATA-CAT-TATGTA-TTCATC--A-CTAAGA--C--TGTCGCTAT-A-CGATCTC-CGGC----TTATTCATCTC-T-TGCAC-G-ATAA---GG--GAA-TT----TTA----G---CT--AT---TTA-A-A-GTCACCTGGCT-T-GGAC-TTAGAAATTT------TC--T-------G--ATA-A-T-GC-G-G-CAA-AAG-TTTAT-A--T-ACAAAA--GTA--TATT--TTTTTTCAA--TAGAGTGGGTC--AA-----GTCTCCAT-A--C-T-TTTA-TTT-ACA---AAA-CAT--T-TT-AC---ACA-TG-AACAT----------------------------T-TAC-TCA--GTTT---CA-A-T--GGAGA-CT-TG-ACCC-AC-T-CCTA---TGTGAAAT-TT-T-GCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-ATT-----T-TTGT-G-CGT-T---TATCGCGT--GTA--CG-TCA-TTTTCAA--T-------TTG--ATTTTTT--CAATGTTCCTTTT--------ACTTG-CG--C-ACAC--AAGA--A-AAG--TTATTGTTTGA-ACAC----TAT--GG-TCTGA-TTGT-TTT--AA-C-TAGAATT-T--AAA-TT--T-TCTG-TTT-TCTGGGG-AAG-TTTC-A-TTTT---AA--C-T-TG---AT-TT-TG-TCCCTC-TG-TGGGCACTC-CGCT-C-GAT-AAG-TCACC-C-ATCTTCTt
gi|8 : cT-TTA-TTCGTAAA---C-TT--AGC---ATAA-------AAT-GC-CAAAA---A-GA---TATTA-TA-A-T----G-AT-A---T-G---TTT-A-GAAT-AA-A--T--T-CAT-ACC-ACC-------------AA--AGAGAGAAAAAAAGAAAAAAAAGAAAA--------A-------G--------A-AAAAC-ACG-T-AGGAAAAAGCG-G--TAATCGAA-CCACAG----GTATG-CAT-TTTGGA-CTCATC--A-GTAAGA--C--TGTCGCTAT-A-CGAT-CT-CGGC-----TATTCATCTC-T-TGCAC-G-ATAT---GG--GAA-TT----TTA---AG---CT--AT---TTA-A-A-GTCAACTGGCT-T-GGAC-TTAGAAATTT------TC--T------TG--ATA-A-T-GC-G-G-CAA-AAG-TT-AT-A--T-AC-AAAAAGTAAG---T--TTTTTTCA---TAGAGTGGGTC--AA-----GTCTCCAT----T-T-TTTA-TTT-AC----AAAACAT--T-TT-AC---ACA-TG-AACATAC-A-CTA--C---C-------ATA-TTT-TAC-TCA--GTTTA--CA-A-T--GGAGATCT-TG-A-CCCAC-T-T-TA---TGTGAAA--TT-TTGCTTGG-AAAA--G-T------C-AAA-TTTGC--TGTT-ATT-----T-C-GT-G-CGT-T---TTTCGCGT--AT--ACG-TCA-TGTTC-AA-T-------TTG--ATTTTTT--CAATGT--CTTTT--------ACTTG-CG--C-ACAC--AAGA--A-AAG--TTATT-TTTGA-ACAC----TAT--GGTGCT-A-TTGT-GTT--AA-C-TAGAATT-T--AAATTT--T-TCTG-TTT-TCAGGGG-AG--TTTCAA-TTTT---AA--CTT-TG---ATATT-TG-TCCCTC-TG-TGGGC-CTCACGCT-C-GATAAAG-TCACC-C-ATCTTCtt
gi|9 : gG-GTGACTTTTATCCGGA--GCGGAAGTG-CCTATTCA-C-GACTC-GGGTACCGTTTATTGCG-AAATCGGG-AGTTTAAA-ATCCA-C-ATT-----TTT--A-C-CTGT--T-TTA-CAATAGATA---CA-GT--C------GTT-CTAAAA--------------GTGCTAT--T-CCAAA-AT--A--TGCATT--T------A-A-----------------A--ATACA-TAGA--TC--A--TGC---TC-AAA---A--A-A------ATA------AA---T--CA---A-T----AT--GTCA-G-AAT-T-GTT--A-CAGG-CG---A--T-C----ATG-T---------T-TTCCGACATT-AAGCG----TTTT-C--AA-ACT--C----A--------C-------------T--A---------TT-CATTG---AT---GTCTGG-AGTA-C---AAGGTA--CCAAA-TG-A-A-CTTAGCATATATGCAG-GTG-T---TT-GAAATTGT-TCTCTT------------AA-CT---TTC-CTTCAAA-C-TGCCGTTTACA--A-ACC------AACAC---CC----GT--T-TCACGGGGAGGGCCCATAA--ATACTGTTTACA-TTTATC-AGCT--AG-CCGC-ATGTTCGAAT-AAG--TA-CTT-GT-AGT-C--TC-ATTAA--A----C-------ACA-TA--TTA-TTCGT-AC---C-TT--AGC---AT-C-------AAT-GC-CAAA-------G---T-TTA-TA--------G-GT-A---T-G---TTTCA-GA---AA-A--T--T-CA--A-C-ACC--------------A--A-AGAG------------------AAA--------A-------A--------A-AAACG-ACG-T-AGGAAAAAAT--G-GTATT-GAA--CACAG----GTATA-CAT-TA-GTA--TCATC--A-ATATGA-----TGTCGCTA--A-CGAT-T--CGGC----CTATTC-TCTC-T-TGCA--G-ATAA---GG--GAA-TT----T-----AG---CT--AT---TTATA-A-GTC