lowQualScore : 11111111111111111111111111111111111111111 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222 3333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333
lowQualScore : 11111 22 33333 88888888888888888888888888888888888888888 11 111 444444444444 11 5555555555 333333333333333 2222222222222222222 111111 222 111111 33333333333 1111 111 333 88888888888888888888888888888888888888888888888888888 11111 44444444444444444444444444444 44444 111 1 111 222 1 333333333333333 222222222222222 33 1111111 22 333333333333333 6666666666 111 11 444 4444444 1 7777777777777777777777 11111 22222222222 55555555555555555555555555 11111 3333333 1111111 1 77777777777777777777777777777777777777777777777 1 88888888 1 444 1111 111 22 444 77777777777 3 11 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1 111111 1111111 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 2 33333 2222 22222 22 888888888888888888888888888888888888888888888888888888888 1 222 1 11 6666666666666666 1 11 1 3333333 1 1
lowQualScore : 6 1 0 44444 00 22 7 44444 0 5 5 5 44444444444444444444444444444444444444444 3 99 333 11 0 555555555555 0 5 2 77 5555555555 5 6 6 3 444444444444444 6 5555 2 2 3333333333333333333 0 8 66 4 4 4 222222 0 000 0 333333 0 4 88888888888 4 999 8 3333 4 4 888 1 5 000 1 6 9 77777777777777777777777777777777777777777777777777777 5 66 4 22222 66 4 777 77 2 888 5 99999999999999999999999999999 0 0 4 1 22222 4 55 0 2 555 3 3 4 3 111 3 333 3 6 3 3 1 1 999999999999999 4 888888888888888 9 4 11 33 3333333 88 11 44 8 3 888888888888888 2 5 0 5 5555555555 0 999 0 1 22 5 4 222 4 1 9999999 4 2 5 5 7777777777777777777777 22222 00000000000 88 5 66666666666666666666666666 5 3 77777 1 1 9999999 5 5 6666666 0 22222222222222222222222222222222222222222222222 0 8 0 5 55555555 2 555 8888 0 555 55 5 222 0 1 11111111111 1 0 8 0 3 6 11 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 0 3 5 444444 55 5 6666666 5 66 5 2 6 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 7 6 3 00000 7 1 6666 7 22222 6 00 222222222222222222222222222222222222222222222222222222222 7 99 3 0 777 0 44 7 4 3 8888888888888888 6 3 99 3 6 8888888 3 3 6
lowQualScore : . . . ..... .. .. . ..... . . . . ......................................... . .. ... .. . ............ . . . .. .......... . . . . ............... . .... . . ................... . . .. . . . ...... . ... . ...... . . ........... . ... . .... . . ... . . ... . . . ..................................................... . .. . ..... .. . ... .. . ... . ............................. . . . . ..... . .. . . ... . . . . ... . ... . . . . . . ............... . ............... . . .. .. ....... .. .. .. . . ............... . . . . .......... . ... . . .. . . ... . . ....... . . . . ...................... ..... ........... .. . .......................... . . ..... . . ....... . . ....... . ............................................... . . . . ........ . ... .... . ... .. . ... . . ........... . . . . . . .. ...................................................................................... . . . . ...... .. . ....... . .. . . . .............................................................................................................................................................................................................................................................................................. . . . ..... . . .... . ..... . .. ......................................................... . .. . . ... . .. . . . ................ . . .. . . ....... . . .
lowQualScore : 0 2 8 33333 11 00 0 77777 7 7 7 7 66666666666666666666666666666666666666666 0 11 000 44 1 111111111111 1 0 2 00 2222222222 7 0 0 9 999999999999999 5 9999 5 5 7777777777777777777 9 8 99 0 0 0 888888 1 222 3 111111 8 0 66666666666 0 666 0 8888 4 4 666 7 7 111 0 7 7 00000000000000000000000000000000000000000000000000000 0 99 4 99999 11 4 888 00 5 888 0 22222222222222222222222222222 2 8 0 4 66666 0 00 8 0 555 6 6 5 6 888 6 666 0 9 6 9 2 3 888888888888888 4 333333333333333 2 0 11 22 8888888 00 22 11 9 2 111111111111111 0 0 1 0 9999999999 7 000 2 8 00 0 2 000 0 5 4444444 4 8 2 4 6666666666666666666666 55555 55555555555 88 0 99999999999999999999999999 7 7 11111 7 8 0000000 7 7 3333333 0 22222222222222222222222222222222222222222222222 8 0 6 6 22222222 0 333 5555 2 888 88 0 888 8 0 55555555555 0 8 2 2 2 4 00 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 8 3 7 444444 55 0 2222222 0 99 0 3 7 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 3 7 3 33333 3 0 3333 3 00000 7 00 000000000000000000000000000000000000000000000000000000000 3 99 5 0 222 0 00 3 7 7 0000000000000000 7 3 33 3 7 3333333 3 3 7
consensus : NAAATGCATGCTTAACTTTCGTTTCACTCTG-----ATTTGGGTAGA-CTTCTGAGCCACNGACTGAT-G-ACT-GAGC-----CAAGGG-CT-----TGTCG-GA-CAGGAGATGANA-GACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAAGAAAAAG-TCGTATAAGGCTAGA-TCTGGNG-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATGGA--GCATTA-TCATG-AAGTAGACGAACAT-GCCTA------AATGCT--GACACAG---A-CGTAGTTTA-TGNT-A-----TAT-CTCAA-GAGCTTTTT-TAGT---AT-AACATTATCGGTAATACC-GAC-CGGTAACA-CTTTTGCCCTTC--GGCAC-CGGAAATTTGTAACGGCT-ATACCAT-CA-CATNAA-AGAGG-TAT-GCA--GTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-NTCT---TTTGG-CAAC---T------ACAGGCC-TTC-TA-CC-GTGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTA-TTGG--TTCGAAATAGT-A-ACCC-A-TG-T-T-C-GTC-A-CCAGCAACAATGTTTGCAAATTGTCTT-TGATTGAATTTAGGAAAACATTTTC--GAGCAAT-TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTCA-TCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCGTACTT-TC---A-------AAATAC-GCTTCAAAA-TGAAATGCAC-CCGAGATAGCGATATGCCAACAGCTTTGGCAN-TATC-ACGAATCGTG-NATC-TGCCA-TA-CACTTTCAATT-ATTTTCCCNGA----TC---C------T-----TT-----TG---------CCTTGCCTGTTACA-GTCAC---AGGTCGGCCAG-ATTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCT-CCA-C-T-ACGAACTG-T-CC----CAGA-CC-AT--------CAN-NN--TCTCCCAA--TT-AA------GTAAA-AATCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTATATAAGCTTTA---TA---ATATCTACATTCTCACAGCGTTTCCT--A-CCATTTTCACAAACAGTGGTCAAC-GACTGGCTCTATTGCGAAATGACTT-ATAT-AAGTTTAAAATTATGTGGAGCTG-AAGGCTCGTGTT--TAT---AN-TTG-AAAG-------------TTTTGA-A-----------AAG-----------------------A---------T--CCACGAAATCGTGC-AAAGCGTT------ATCGCGCTGTGG-TACAAT-------ACA-CATT--AC-ATATCCA---ACAG-CC-TCGT----A----CG-TCGTTATAA--------AC-TAT-----AGTNC--GTA-CGTTT--GGCTT---AA---T--GCTGATGACGAGCAGCTAGAT-CCGCC--AGACT--TGG----------AA-----------T----GGAAAG-TGGTACA-GAGGGGATTGAATATGAA-TGGACAAGTGGTGCTAT-TGTGC---GG--GGAAC--TTATT-GG-G--ATTAGATCA--C--GGTT-GTTATCTT-TTA---TT-TACA-TA-TGTGTTGCTTCTGGTGATGAGCAGGGAA---A-TGGAACTGATGAAGAAGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT--A-ATATTC--GATGAT-ATGATCGT-------ACT-A-TCGAAG-GCGT--TAATGCTCAAANTTA-TGC-AAATTTG-TT-ATTTACANACATTNA--T---TTGAT-----TTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTGTTT-AT-TTACAAGAATTGATATTTA
Reference ( gi|1 ) : GAAGTGCATGCTTAACTTTCGTTTCACTCTG-----ATTTGGGTAGATCTTCTGAGCC-CTGACTGAT-G-ACT-GAGCAAATTTAAGGG-TTAA---TGTCATGAACAGGAGATAATACGACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGGAAAAGAAAAAG-TCGTAGAAGGCTAGACTCTTGCGCAGTAT-GGTGGGTGTAGCAAGATGATACCCT--TC--AA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ATGTGATCGA--GCATTA-TCATA-AAGTAGACGAACAT-GCCTA------AATGCT--TACATAG---A-TGTAGTTTA-TGCT-A-----T-T-CTCAA-GAGCTTTTT-TAGT---GT-AGCATTATTGGTAATACC-GAC-C-GTAACA-CTTTTGTCCTAT--AGCATGCGGAAATTTGTAACGGCC-ATACCAT-CATCATTAAGAGAGGGTAT-GCA--GTAAAGAA-C-T-T-CTTTG--TGC-T---TATGG-ATCT---TTTGG-CAA----T------ACAGGTC-TTC-TA-T--GTGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTTACTTA-TTGG--TTCAAAATAGT-A-ACCC-A-TG-T-T-C-GTC-A-C-AGCAACAATGTTCGCAAATTGTCTT-TAATTGAATATAGGAAAACATCTTC--GA--AAT-TGCTTAG-CG-A-T-T------GTACTCGTACCCGTATTT-GGTCAATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTTGTACTT-TC---A------TAAATAC-GCTTCAAAA-TGAAATGCACACCAAGA-AGCGATTTACCAACAGCTTTAGCAT-TATC-ACGAATCATGAGATC-TGCTA-TA-CAATTTCAATT-ATTTTCCCCGA----TC---C------T-----TT-----TG---------CTTTGCCTGCTACA-GTCA----AGGTCCATCAA-ATTTTATCCGGC-ATCTTCGACGGACTCC----GTGCCAGTCAGAAATTTCTTTCT-C-A-C-T-ATGAACTG-T-TC----CAGA-CC-AT--------TAT-AA--TCTCCCAA--T--AA------GTGAATCATCTGCATTA-CCGAATCACTTAGTTTTGTGCTAACTTTTATATAAGCTTTAT--TATCTATAGCTACATTCTCACAG-GGTTCCT--A-CCATTTTCACAAACAGTGGTCAACCAACTGGCTCTATCGCGAAATGACTTAATATTAAGTTTAAAATTATGTGGAACTGTAAGGCTCATGTT--TA----AT-TTG------------------TTTTGG-A-----------AAG-----------------------A---------T--CCATGAAATGGCGC-AAAGCATT------ATCACGCTGTGG-TACAAT-------ACA-CATT--AC-ATATCCA---ATA-----TCGC----A----CG-TTGTTATAA--------AC-TATC----AGTTT--GTA-CATTT--GGCGT---AA---T--GCTGATGACGAG-AGCTAGAT-CTGCC--AGACT--TAG----------A------------T----GG-----TGGTACA-GAGGGGATTGAAT-TGAATTGGACAAGTGGTGCTAT-TGTGCCCAAG--GGAACAGTTATTTGACG--ATTAGATCA--CTAGGTTCGTTATCTT-TTG-CCTTATACA-TACTGTGTTGCTTCTGGTGATGATCAGGGAA---AATGGAACTAATGAGAGTGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGATGTA-ATATTT--GATGATCATGATCAC-------ATTCAGTTGAAGCGCGT--TAATGCTCAAATTTA-TGCTAAATTTG-TT-GTTTACATACATTCA------TTAAT-----TTGGA-AAC-ATATTACT-ACTCAAAATTAT----GC-AAAATTGTTT-AT-TTACAAGAATTGATATTTA
gi|14 : AAATGCATGCTTAACTTACGTTTCACTCTG-----ATTTGGGTAGACCT-CTGAGCCACTGACTGAT-G-ACT-GAGC-----CAAGGG-CT-----TGTCAGGAA----ATGTAA-A-GACGACCA-GAGAATATCTGATTAAGTTT--AAGAAAAAGAAAAAT-TCGTATAAGGCTAG-CTCTGGCG-AGTAC-GGTGAGTGCGGCAAGACGGTACCCT--TCTCAG--ACTTTTAAA-ATTGCTTCACAAG-C--------A------ATGTGATCGA--GCATTA-TCATA-AAGTAGACGAACAT-GCCTA------AATGCT--GATATAG---A-TGCAGTTTA-TGCTAA-----TAT-CTCAA-AAGCTTTTT-TAGT---AT-AGCAT
gi|13 : AAATGCATGCTTAACTTTCGTTTCACTCTG-----A-TTGGGTAGA-CTTCTGAGCCACAGACTAAT-G-ACT-AAAC-----CAAGGG-CT-----TGT------CAGGAGATGTAACGACGACC-AGAGAAAAACTGCTTAAG-TTTTGGAAAAAGGAAAAAG-TCGTATAAGGCTAGAA-CTGGCG-AGTAT-GGTGGATGTGGCAAGACGGTACCCTTCTC--CG--ACTTCAAAA-A-------GCA-------------------ATTTGATCGA--GCATTA-TCATA-GAGTAGACGAACAT-ACCTAAAATTTAATGCT--GACATAG---A-TGTAGTTTA-TGCTAA-----TAT-CTCAA-CAGCTTTTTATAGTATAAT-AACA-TATCGGTAATACC-GAC-CGGTAGCA-CTTTTGCCCT
gi|8 : aAAATGCATGCTTAATCTCAGTT--ACTC-------GTTTGAGTAG-CCGTCTGAGTCACTGACTGAT-GCGCTTGAGC-----CAAGGG-CTTC---T-TCGTGACTTG----TAACGTAA-GACCA-GATCAGA-CTTCTTAAGTTTT---GAAAAAAGAAAAG-TTGT-TAAGGCTAGAA-CTGGAG-AGTATTGGTGGGTATGGCAAGGCGGTGCC---------------TC---------CTTCACAAG-TTC----AGATGT---ATATGAT-GA--ACATTAATCATA-AAGTAGACAAACATGGCCTA------AATGCT--GACACAGGGCA-AATCGTTTA-TGAT-A-----T-T--TCTA-GA-----------T---AT-A-CA-TATCGATAATACC-AAC-CGGTAATACCTTTTCCCCTTT--GGCAC-CGG--ACTTGTTACGGCCTATA-CATCCAT-ATT-AGA-AGGATAT-GCA--ATAAAGAACC-T-T-CTTTG--TGC-T---TATGG-TTCTGGCGTTGG-CAAC---T------ACAG--CATTC-TACC--GTA-TTATCTAACCATA-TTT-GCCTCCATTTTTCTT
gi|11 : aCATGCTTAACTTTCGTTTCACTCTG-----ATT-GGGTAGGTAAACGGA----CAGAATG-T-C-ACA-GGACAAA-----------AA----GTCA----CAGGACATAA-AAGACGACCA-GAGAAGAACTGCTTAAGTTTTTGG--------------CC----AAGGCTAGA-TCTGGCG-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TCTCCA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ACGTGATCGA--GCATTA-TCATA-AAGTAGACGAACAT-GCCCA------AATGCT--GACATAG---A-TGTAGTTTA-TGCTAA-----TAT-CTCAA-GAGCTTTTT-TAGT---AT-AGCA-TATTTGTAATACCAGGC-CGGTAACA-CTTTTGCCCTTTTAGGCAT-CGT-AATTTGT-ACAGCT-ATACCAT-CA-CATT---AGAAGGTAT-GCA--GTAAAGAA-C-T-T-CATTG--TGC-T---TACGG-AT
gi|25 : TTTCACTCTGATTTTATTTGGGTAGA-CCTCGGAGCC----ACTGATCG-ACT-GAGC----------------------CA-----AGGAGATGTAACGATAACC-AGAGAAGAACTTCTTAAGTTT---------------AG-TCGTGTAAGGCTAGA-TCTGGAG-AGTA
gi|3 : TG-----ATTTGGGTAGAAGTTG-GAG------A-TGAT-G-A-T-GAGCTA-TTTAAGGGCTTAAAATTGTAATGATAAGGAGATG-TA--AAGTCAGAGAGAA----TGATTTAGTTTT---GGAAAAGGAAA-G-T-GTATAAGG-TAG--TATGGTG-AGT-T-GGTGGGTGTGG-AAGACGATA---T--TT--AA--ATTTAAAAACATTGATT---AAG--TA----AGATGT----TGTG-TGGA--G-ATTA-TAAAA-AAGTAGACGAA--T-GC----------ATG-T--GA---AG---A-TGTAGTGTA-TG---A-----G-T-TTAAA-GAGTTTTTTGTATT---ATTAGAAT-ATTGGTA-TA---GAA-G-GTAAAG---TTTGAATT-T--AG---GTGGA--TTTGTA-CGGT--ATA---------ATAAATAGAGG-TAT-GTA--GTAA-GA----T-T-TTTTG--TG--T---TATGG-AT------TTGG--AA----T------A---GT---TA-TA-TC-GTGTTTAATTAG--ATATTTT-GTT---AAAATTTTTA-TTA-TTAG--TT---AAT-GT-A-A----A-TG-T-T-T-GTA-A---AG--AC--TGTTTG-AAATTGTTTT---ATTGAATATAGGAA---ATTTTA--GA--AAT-TG-TTAG--G-G-T-T------GTA-TAGTA-ATGTATTT-GGT--ATCTGT-AATAT------TGTGGT--TG-A--TGG-AGAAAT-TTTTTGT--TT-------------TAAATAT-GTT---AAA-TGAAATG-A----AAGA-AG-GATTTGCAAATA---TTAG-AT-TAT--A-GAAT-AT---ATTGTG-TA-TATTAATTTTAACTGATTTT
gi|4 : G-----ATTTAGGTTGA-CTTCCGAGGCACCGACTGAT-G-GCT-GAGC-----CAAAGG-CT-----TGTCG-GGACTTG---TAAT--GACGACCAAA------------TA----TTTGGA------AAAAAG-TTGCATGAGGCTAGAC-CTGGAG-AGTAT-GGTGGGTGTGGCAAGACGGT------------A--ACCTC-------CG----ACGA--CT--------TG------GTAATGGA--GCATTA-TCATG-AAGTAGACGAGTAT-GCCTA------AATCCTGATACACGG-----CGTCGTTT---GAT-A-----T-TTCTTGA-GA---TTTT-TAGT---AT-AA-AGTCTCGGTGATACC-GAC-CTGCAAAA-CTTTTGACCTTC--GGCAC-CAGAA-TTTATA-TGGCT-ATACTAT------------------AT-GCA--ATGAAGAA-CAT-T-CTTTG--TGCATGCGTATGG-TTCT---TTTGG-CAAGTTCT------AGAAGCC-TTC-TA-CC-GTGTTTAGTTAGCCATATTTT-GTTTCCAATTTTT---CATA-CCGG--TTCGAAATAGTGA-ACCC-A-TGTT-T-C-GTC-ACC-AGTAACAATGTTTGCAAATTGTCTT-TGATTG-ATTTTGAGAAACAT-TTT--GAGCAAT-TGCTTAG-CA-A-T-TTGTATAATACTCATACACGGTTTT-Ggaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaagtcagattttttatatgaatgtaggcattaatttatagtaaaaatatgtaagataattagttttgtgtaattttatataagattaatattattt
gi|30 : TAAGTTTT-GAAAAAAGGAAAAAGGTTGCATGGGGCGAAATT-TGGAAGAGTAT-GATGGGTATGGCAAGACAGTAACCT--TC--AATGACTTCAAAA-ATTGCTTCACACG-CTC----Atgttgttgtttcgtttgcttgtttgtttgtttcaaatgtcaaaggctttggcaatatcacgaatcgtgtatctgccatcactttcaattatttccctgaccttttaaacatggcttgcctgaacaagtcacagatcggccagattttgctgcatctttgacggaccctatgccagtcagaaaattctttctccacctacgagttatctca
gi|38 : --ACTTCAAAA-ATCGCTTCACAAC-CTCTGTCAGATGT---ATATTGTGGA--GCATTA-TCATG-AAGTAGACGAACAT-G
gi|31 : ACAAGACTC----AGATGCTCCATGTGGTGGGAGGCATTA-TCATGGAAGTTGACGAACAT-GCCTA------AATCCTA-TTTATAA---A---TAACTTA-TATA-A-----A-T-CTT---GAGCTTTTT-T
gi|5 : A-CCATG-AAGTAGATGAACAT-GCCAA------AATACT--GACACAG---GGTGTTGTTTA-TGGC-AAGTAGT-T-CTT---GAGCGTTTT-TAAT---AT-AACAT-ATCAGTAATACC-GACAT-GTAACA-CTGTTGCCCTTC--GGCAC-CGGAA-TTAGTA-CGGCT-TTACCAT-CA-CATGAGGAGAA--TAT-GCA--ATAAAGAA-C-----CTTTG--TGC-C---TATGG-TTCT---TTTGG-CAAC---T------ACAGACC-TTC-TG-CC-GTGTTTAGTTAGCCATATTTT-ATTTCCAATTTTT--A-TTA-CTGG--TTCGTAATAGTGA-ACGC-A-TG-T-T-TTGTC-A-CCAGTAATAATGTTTGCAAACC--TTT-TGGTTGAATTTGGGAAA-CATGTT---GAGCAAT-TGTTTGG-T----T-T------GTACTCGTACCCGTTTTT-AGTC-ATC---------------TGTGAT-------------GAAGT----TCGTACTT-TC---A-------------------AAGA-T----TGCTC-CC------GCGAT-----AGCAGTTTTAGCAG-TATC-AC--------------TACCA-TA--ACGTTCAATT-ATTTCTCTGGC----TT---G------TAGACATT-----TG---------CCATGCCCGTAACA-GTCGTCACAGTTCGACTAG-ATTTTG--CTGC-ATCTTTCACAGACTTTACAGGTGTCAGTCAAAATTTTCTCTCT-CCATC-T-ACGAACTG-T-CT----CAtg
gi|34 : A-TCATG-AAGTAGACGAACAT-GCCTA------AATCCG--GACACAG---G-CATCGTTTA-TGAC-AT----T-T-CTTA---AGCTTTTT-AAGT---AT-AACATC-TCGGTAATACC-GAC-CTGTA
gi|42 : -TGTAGTTTAATGCT-AG----TAT-CTCAAAGAGCTTTTT-TGGC---AT-AACAT
gi|20 : CATGAAAAGAA--TAT-GTA--ATAAAGAA-C-CGT-CTTTG--TGC-T---GATGA-TTCT---TTTGG-CAAC---T------ATAGGCC-TTC-TACT--GTATTTAGTTAGCCATATTAT-GTTTCCAATTTTCT---TTA-TTGC--TTCGAAATAGTAA-ACTC-A-TGTT-T-T-GTC-CTC-AGCAACGATGTTAGTAAATTATCTT-Ta
gi|33 : CATTA---GAAGGTAT-GCA--GTAAAGAA-C-C-C-CTTTG--TGC-T---TACGG-ATGT---TTTGG-CAAT---T------ACAGTTC-TTC-TA-TC-GTGTTTATTTAGCCATATTTT-GCTTCCAA
gi|9 : caAAAGGTTATTGCATAGTAAAGAA-C-T-TTCTTTAGTTGT-T---TACTG-ATCT---TTTGGGCAAGC--T------ACAGGTC-TTCCTA-TCGGTGTTTAATTAGCCATATTTTTGCTTCCAATTTTTT--CTTAATTGG--TTCAAAATAGT-A-ACCC-A-TGTT-T-C-GTCAA-C-AGCAACAATGTTTGCCACTTGTCTT-TAATTGAATATAGG-AAACATTTTCAAGA--AAT-TGCTTAGTCGAA-T-T------GT-CTCGTACCCGTATTT-GGTCA--------------------TGGTAATGCATCTGGCAGAAATC-TTTTGTACTT-TCAAAA------TAAA-AT-GCTTCAAAA-TGAAATGCAC-CCAAGA-AGCGATTTGCCA--AGCTTTTACATCTATCAACGAATCAT-AGATC-TGCTA-T--C-ATTTCAATT-A-TTTCCCCGA---------C------T-----TT-----TG---------CATTGCCTGCTACA-GTCAC---CGGTCCATCAAGATTTT-TCCTAA-ATGTTCGACGGACTCC----GTGCCAGTTA
gi|21 : aAGAA-C-T-TTCTTTG--TGC-T---C-TGGCATAT---TCTTG-CTA----TTCCTTGAC-GTTC-CCC-T------TGTTCAGTCACCCACACCTT-G---TCAATTTTTCT------TTGAGTTTCAAAGTAGT-GTACCC-A-CGTT-T-C-ATC-A-C-
gi|2 : tgcCATAGTTT-GCTTCCAGTTGTTTT---TA-TTGG--ATCAAA---------------T--T-T-C-GTA-A-CCAGCAACAATGTTTGCAAATTGTCTT-TGATTGAATTTAGGAAACCTTTTTA--AA--AAT-TGCTTAG-CGGA-T-A------GTACTCATACTCGTTTTT-GGTCT-TCTACCAATATA-----TGCGGT-ATGTATCTAGCAGAAATATTTT-GTACTT-TC---A--------AACAT-GCTTCAAAA-TGAAATGC--------------------CAACAGCTTTGGCAA-TATC-ACGAATCGTG-TATC-TGCCACTA-T--TTTCAATT-ATTT-CCCTGA---------C------G-----TT-----TG---------CCTTGCCTGTAACA-GTCAC---AGGACCGCCAG-ATTTTGCC--AC-ATCTTTGACAGACTCA----GTGCCAGTCAGAAATTTCTTTCT-CCA-CCT-ATGAACTG-C-CC----CAGA-CCCAT--------TAA-TT--TCTCCCAA--TT-AA------ATAAA-AATCAGTATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTATATAAGCTTTACGGTA---ATAACTACATTCTCACAG-CTTTTCTCAG-CCATTTTAACAA-CAGTGGTCAAT-GACTGGCTCTACTG--AAATGACT----AT-AAGTTTAAAATTATGTGGAGCTG-AAGGCTTGTGTT--TATACTGT-TTGAAAAGTATTGAATAGAGCTTTTCA-A-----------GAGTATCGTC----------------A---------T--CCACCAAATCGTGC-AAAACATT------ATCGCGCTGTGG-TACAATACACATTACA-TATCGAAC-A-GTCCACGTACG-----TCGTTTAAA----CT-TTGNNNNNNNNNNNATTACATATCGAACAGTCCACGTA-CGT------CGTTCAAACTTT--GCTGATGACAAGCAGCTAGAT-CCCCC--AGACT--TGG----------A------------A----GG-------------GAGTGGAT------------GGA-AAGT--TG------GTGCACAGG--GGA-CAA--AT--GGCGCTATTGTGCCA--C-AGG------AACTTATTG-------ACA-TAATATGT-GCTTCTGGTAATGAGCAGGGAA---A-TGGAACTGATGAAGATGGGGATGGAGTGGA-A-A-TGAACAAT-CTGATCGAT-TAGATATTA--GATGATTATGATCATGATGATGACTGATTTGA---------TAATGCTC-ACTTTATTACT-GATTTG-ctgtaactatttctgataatcgacgtggatcgcagttt
gi|36 : T-GCTTCCAATTTTT---CTTA-TTGG--------------A-ACCT-A-TG-T-TTC-GTC-A-CCAGCA-CAATGTTTGCAAATTGCCTT-TAATTGAATTTAGGAAA
gi|12 : TTTTTCA--TA-CTGG--TTCAAAATAGT-G-ACCC-AATG-T-T-TTATC-A-CCAGTAACAATGTTTGTAAATTGTCTGGTGATTGGATTTTGGAAT---TGTTCT-GAGCAAT-TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTTTGGTCA-TCTGTCTATATA-----TGTGGT-ATCCATCTGGCAGAAATC-TTTCGTACTTCTC---A------ACAATAC-GCTTCAAAA-TGAAATGCAT-TTGCGATAGCGATATGCCAACAACTTTGGCAA-TATC-ACGAATCTTG-CATC-TGCCATTATC--TTTCAATT-A-CTTCCCAGAGTT-TT---CAAGACAT-----TT-----TG---------CCTTGCCTGTTACA-ATCAAT--AGGTCGGCCAG-ATTTTG--CAGTAATCTTTGACAGACTCT----GTG------AGA---TTCTTTCT-CAA-C-TGACGAACTG-T-CC----CAcaatttca
gi|37 : aCTTA-TTGG--TTCGAAATCGTGA-ATCC-A-TA-TAT-C-GTC-A-CCAGTAACGATGTTTGCAAATTGTCTT-TGATT
gi|15 : tgattTGG--TTCAAAATAGT-G-ACCCCA-TG-T-T-TTATC-A-CCAGTAACAATGTTTGTAAATTGTCTG-TGATTGGATTTTGGAAT---TGTTCT-GAGCAAT-TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTT-GGTCA-TCTGTCTATACA-----TGTGGT-ATCCATCTGGCAGAAATC-TTTCGTACTTCTC---A------ACAATAC-GCTTCAAAA-TGAAATGCAT-TTGCGATAGCGATATGCCAACAACTTTGGCAA-TATC-ACGAATCTTG-CATC-TGCCATTA-C--TTTCAATT-A-CTTCCCAGAGTTTTCAGAC------A-----TT-----TG---------CCTTGCCTGTTACA-ATCA----
gi|32 : cGTCAT-TGCTTGAATTTAG-AAAATATTTTG--GGG-AAT-TGCATAG-TG-AAC-T------GTACTCTTGCCCGTTTTT-GATCA-CCTGTCAATATA-----TCCGGA-ATGCATCAGGCAGAta
gi|16 : ATTTTC--AA--TATATATTTGG-CC-A-TCT------TTACGCGGATTCTTTTCT-GATCA-TTTGTCAGCAAA-----TGTGGT-ATCCATCTTGCA--------TTTAT-CTT-TC---GGAGACCTAAATGCTTTTTCAAAATTGAAA
gi|22 : caaactgcgatccacgtttcatcacctgtaactatttctgataatcgacgtggatcgcagtttgcaaTACCCGTATTT-GGTCA-TCTGTCAATATACCGTATGTGAT-GTGCATCTGGCAGAAATCTTTT-GTACTT-TC---A-------AAATAC-GCTTCAAAA-TGAAATGCAC-CCAAGATAGCGATATGCCAACAGCTTCAACAT-TATC-ACGAACCATG-GATC-TGCTA-Tatatggttcccgatgatatatcaactaaatttgcaatacctcttgtggtcaatcacccatcgtcattaacaatttttttttaaatttgttca
gi|4 : aCAAAGGCTTTGGCAA-TATC-ACGAATCGTG-TATC-TGCCA-T--CACTTTCAATT-ATTT-CCCTGA----CC---T------T-----TTAAACATG---------GCTTGCCTGA-ACAAGTCAC---AGATCGGCCAG-ATTTTG--CTGC-ATCTTTGACGGACCCT----ATGCCAGTCAGAAAATTCTTTCTCC-ACC-T-ACGAGTTA-T-CT----CAc
gi|35 : gatttaggttgacttccgaggcaccgactgatggctgagccaaaggcttgtcgggacttgtaatgacgaccaaatatttggaaaaaagttgcatgaggctagacctggagagtatggtgggtgtggcaagacggtaacctccgacgacttggtaatggagcattatcatgaagtagacgagtatgcctaaatcctgatacacggcgtcgtttgatatttcttgagatttttagtataaagtctcggtgataccgacctgcaaaacttttgaccttcggcaccagaatttatatggctatactatatgcaatgaagaacattctttgtgcatgcgtatggttcttttggcaagttctagaagccttctaccgtgtttagttagccatattttgtttccaatttttcataccggttcgaaatagtgaacccatgtttcgtcaccagtaacaatgtttgcaaattgtctttgattgattttgagaaacattttgagcaattgcttagcaatttgtataatactcatacacggttttgtgttgttgtttcgtttgcttgtttgtttgtttcaaatgtATC-TGCCA-C--CGCTCTCGATT-ATTTCCCCCGA---------C------T-----GT-----TG---------CCTTGCCTGTTACA-GTCA--------C-------ATTTTG--CTGA-ATCTTTGACGGTCTCT----GTGTCAGTCAAA
gi|27 : cC-TGCCA-T--CACTTTCAATT-A-TTTCCCTGA----------------A-----TT-----TGGGACATTATCCTTGCCTGTTACA-GTAAC---AGGTCGGCCAG-A--TTGTGCTGC-ATCTTTGATGGACTCT----GTGCCAGCCAGAAATTt
gi|19 : CATTCGAAAACTTCATTCT-TTA-CCT-ACGAACTG-TCTCATAACATA-CC-ATATCAGACCCAT-AA--ACTTC-AACTT--AATTTTCAGTAAA-AATCTGCATTA-CCGAATGATTGAGTTTTGTGCTAACTTTTATct
gi|18 : -C-T-ATGAACTGGT-CC----CAGG-CC--T--------CATTAACTTCTCCCAA--TTAAA------GAAAAAAATCTGCATTATCCGAATCACTTAGTTTTGTGCTAACTTTTATATAAGCTTTA--------ATATCTACATTCTCACAGCGTTTTCT--A-ACATTTTCAACAACAGTGGTCAACCCGATGGCTCTAT--CGAAATGA-TTAAtcatgtatcacttctaattccttataaatattctcgactcgttttctaac
gi|43 : ccac-T-ATGAATTG-T-CC----CAGACCC-AT--------TAA-CT--TCTCCCAA--T--
gi|10 : --TCTCGCAA--TT-AA------GTAAA-CA-CTGCATTT-CTGAATCACTGAGCTTTATGCTAAC--TTATATAAGCTTTA----AT-TAGATCTACATTCTCACAGCATTTCCT--AGCCATTTTCAC-AACAGTGGTCAACGAA-TGGCTCTAT--CGAAATGACTT-AT-----GTTTAAAACTATGTGGAGCTG-AAGGCTCGTATT--TATTT-AT-TT-------------------TTTTGA-A-----------AAGTAACGCTTTTCAAGATTATCATCA---------T--CCATGAAATTGCGC-AAAGCGTT------TTCGCGCTGTGG-TACAAT-------ACA-CATG--AC-ATATTCA---ACAGCCC-TCGT----A----CG-TCGTTA-AA--------A----------------------GTTT--GGCTT---AA---T--GCTGATGACAAGCAGCTAGAT-CCCTC--AGACT--TGGAAGGGAATGAA------------T----GGAAAGTTGGTACA-GA-GGGATTGAATATGAA-TGGACAAATGAAGTTAT-TGTGtaa
gi|24 : actATCTGCATTA-CCGAATGATTAAGTTTTGTACGAACGTTTATATAAGCTCTAA--TA
gi|17 : aattcactaaaaCCA--A-CCATTTCTACAA-CAGTGGACAAC-GACTGTCTCTATT-TGAA-TGACT--GTAT-AACTTTAAAACTATGTAGAGCTG-AAGGTTCGTATTTATA----ACGTTGGAAAGG------------TATTGA-ATAGGGATATTCAAG-----------------------AGTACATGTAT--CCACGAAATCGTGC-AAAGCGTT------ATCGAGCCATGG-TATAAT-------ATA-CCTT--AC-ATATCAA---Aagactggctttattgaaatgactattagtgaagctgaaggctcatgtttatactgttggaaa
gi|24 : ACTGGCTTTATTG--AAATGACT----------------ATTA-GTGAAGCTG-AAGGCTCATGTT--TA----TA-CTG--------------------TTGG-A-----------AA
gi|7 : aattcactaaaaatctgcattaccgaatgattaagttttgtacgaacgtttatataagctctaataagTAATTTTATAT-AAGATTAATATTATTTAGGTTTATAAGA---AT-TT--TA----AA-AAG------------------T---GGTA-----------AAG-----------------------A---------TGGTTATGAAATGATGA-AAAA-ATTGAAAAGAT-ATGGTGTGG-T-TAAT-------A----ATT--A--ATATA-A---AGA-------G-----A----TG-TGATT-TAA--------A--TAT-----AGTGT--GTA--ATTT--GGT-T---AA---T--GATGATGA-GAG-AGCTAGAT-TAGAT--AGAGAGATAG----------AA-----------T----GGAAAG-GGGTAAA-GAGGG--TTGAAT-AGA--TG---AAGTGGTG-TATATGTGC---AGATGGAA---TTATTAGA----ATAAGAT-A--T--GGTTAGTTAT----TTA-AATT-TAAA-T----TGTTGATT-TGGTGATGA----GGAAGGGAATGGA--TGATGAAGAAGGGGATGA-GTGGA-ATA-TGAA-AGT--TGAT--ATGGA-ATATTTTGGATAAT-ATG-TCAT-------ATT-----GAAGAGCGT--TA-TGAT-AAATTTA-TG--AAATTTG-TT-ATT-AAACATATTTAATT---TTGCT-----TTG-A-AAC-GTATTATT-A---AAAATTAT----G---AAATTGTTTTAT-TTA--AGAATTGATATTT
gi|26 : -----------------------A---------T--CCGCGAAATCGTGCCAAAGCATT------ATGGCGCTGTGA-TACAAT-------ACATTATT--AC-ACATCGA---ACA-----
gi|29 : agatgaaggctgagacgtgtttataccgttagaagctattcaacagtatcgtc-----------------------A---------T--CCACAAAATTGTGC-ACAATATT------ATTGTGGCGTGG-TACAAT-------ACA-CATT--AC-gccct
gi|6 : tgaaggctcatgtttataccattggaaaggtattgagtagagctaatcaagagtatcatcC-AAAGCATT------ATCGCGCTGTGGGTACAAT-------ACA-CATT--ACGATATCCA---ACAGGCCCTCGC----AAGCACGGTCGTT-TAA--------AC-TATG----AAGTT--GTAACATTTTGGGCTT---AA---TCCGCTGATGACGAACAGCTAGATTCTGCCGCAGACT--TAG----------AAGAGAATGAATGTAAGAGA-----TGGTACATGAGGGGATTGAATATGAAT-GGACAAGTGGTGCTAT-TGTGCCACAG--GAAAC--TTATT----G--ACTAGATCAAGCT-GTTTCGTTATCTT-TTAACCTT-TACAGTACTGTGGTGCTTCTGGTGATGAGCAGGGAA---ATGGGAACTAATGAAGAAGGGGATGAAATGGATA-ATTGAACAGTCCTGATCAA---A-----TC--AATGA--ATCACCGC-------A-TCAGTCGAAGCGCGTTGTAATGCTCAGAATTA-TGC-AAATTTGTTT-ATTTACAAACATTCATATAATTTGAT-----TTGGATAACGGTATTACTAACTCAAAATTAT----GCAAAAATTGTTT-ATGTTACAAGAATTGATATT
gi|39 : aCGTT------ATCGCACTGTGG-TACAAT-------ACC-CATT--AC-CCATC
gi|28 : acAAAGTTA-TGC-AAATTTG-TTTGTTTACATACTTTAA------TTAATGTTAATTTGA-AAC-GTATCACT-ACTCAAAACTATATATGC-AAACTTGTTT-AT-TTGCATGAATTGATATTTAagacaaccctcgta
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|23 ): GTAATTCCGACCAGTAACGAAAACCTGTTACCCGGCTTCGACACCGGAATTATGTACCGCAGCTATAACAATAAACGGGGAGGAGAATATAACAATAACAATCCTTATTATAGTGGAGTCTATGAAGGTTCATTTG
Unaligned ( gi|40 ): AGATACTTTATCATACCAATGCTTTGACTAAACTTGCTGAAACTTTGTA
Unaligned ( gi|41 ): TACAACACACATTACATATCGAACAGCCCTCGTATTCTTCCGTGTTTA
Unaligned ( gi|44 ): GTAACACATAATCTTTTAAAGATTTGATTGTAA
Alignments
lowQualScore : 222222222222222222222222222222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111111
lowQualScore : 111111 111 11 11111 1111 5555555555555555555555 22222 11 1111 22222222222222 11111111 1111 111111 111111 1111 1 1111 111 11 111111 11111 1111 111 1 222222 222222222222222 111111 11 33 6666666666666666666666666666 11111 111 1111 1 1 44444444444444444444 111111 111111 4444444444 22222 1 1 11 333 222222 1111 222222222222222222222222222222222222222222222222222222222222222222222222 111111 1 22 1111 22 33333333333333333333333333333333333333333333333333 1111111 777777777777777777777777777777777777777 33333333333 11 3333333 444444444444444444444444444444444444 1 1 11111 11 44444 111 222 444444444 4 11 11 1 111 333333333333333333 1 1 1 2222222 1 1
lowQualScore : 555555 111 0 5 2 5 5 11 5 22222 0000 1 9999999999999999999999 1 44444 55 0 3 8888 1 7777777 0 0 4 55 4 5 77777777777777 2 4 1 1 1 22222222 1 1111 6 66 3 3 3 111111 0 4 111111 3 1 2222 3 6666 7 777 0 0 4 5 0000 5 5 888 888 5 888 77 77 5 7 333333 2 77777 4 4 4 66 4 99999 55 4 777 1 55 777 4 4444 4 1 4 0 4 3 0 66 66 5 4 222 3 3 5 3 888 0 2 1 1 2 3 4 2 999 7 111111 777 000000000000000 0 3 4 1 000000 66 3 22 66 8 999 777 4 66 777 555 3 9 1 2 4 3 55 4 5 77 00 44 7 6 1 6666666666666666666666666666 11111 2 222 4 2 5 5 66 5 0000 0 0 7 0 5 5 00000000000000000000 333 666666 6 99 6 1 999999 1111111111 4 00000 8 0 3 5 0 99 2 000 444444 5 0000 66 777777777777777777777777777777777777777777777777777777777777777777777777 77 1 5 0 222222 0 3 3 3 0 88 0 0000 6 55 11111111111111111111111111111111111111111111111111 5 4444444 6 99 99 99 666666666666666666666666666666666666666 6 2 444 88 6 2 6 1 6 88888888888 11 2222222 2 999999999999999999999999999999999999 0 3 2 0 0 3 4 7 22222 2 22 22 44444 3 888 333 3 444444444 0 0 88 7 6 1 22 0 111 1 888888888888888888 55 0 0 0 2 3333333 0 0 7
lowQualScore : ...... ... . . . . . .. . ..... .... . ...................... . ..... .. . . .... . ....... . . . .. . . .............. . . . . . ........ . .... . .. . . . ...... . . ...... . . .... . .... . ... . . . . .... . . ... ... . ... .. .. . . ...... . ..... . . . .. . ..... .. . ... . .. ... . .... . . . . . . . .. .. . . ... . . . . ... . . . . . . . . ... . ...... ... ............... . . . . ...... .. . .. .. . ... ... . .. ... ... . . . . . . .. . . .. .. .. . . . ............................ ..... . ... . . . . .. . .... . . . . . . .................... ... ...... . .. . . ...... .......... . ..... . . . . . .. . ... ...... . .... .. ........................................................................ .. . . . ...... . . . . . .. . .... . .. .................................................. . ....... . .. .. .. ....................................... . . ... .. . . . . . ........... .. ....... . .................................... . . . . . . . . ..... . .. .. ..... . ... ... . ......... . . .. . . . .. . ... . .................. .. . . . . ....... . . .
lowQualScore : 888888 222 2 1 8 0 0 99 0 55555 6666 4 9999999999999999999999 4 11111 66 1 4 3333 3 7777777 9 8 4 44 4 0 11111111111111 0 4 7 1 1 44444444 1 2222 7 11 6 6 6 555555 5 0 111111 6 0 7777 9 2222 3 000 7 1 4 7 6666 0 0 888 333 7 666 11 99 7 9 555555 6 99999 0 4 4 11 0 88888 55 0 000 2 00 888 4 1111 4 9 4 9 4 6 4 66 44 0 2 888 1 1 4 1 555 8 5 1 4 9 3 9 6 111 3 111111 000 888888888888888 5 6 0 0 777777 33 9 11 11 9 888 888 4 11 888 888 0 2 4 1 4 7 44 4 4 88 00 66 3 9 0 4444444444444444444444444444 11111 2 222 4 5 0 0 99 0 6666 2 3 1 0 0 0 88888888888888888888 000 444444 7 22 7 0 222222 0000000000 0 00000 0 8 3 4 8 00 5 000 333333 0 6666 99 111111111111111111111111111111111111111111111111111111111111111111111111 99 7 0 7 888888 1 6 6 6 0 33 5 6666 7 33 22222222222222222222222222222222222222222222222222 2 3333333 7 22 22 22 555555555555555555555555555555555555555 7 5 777 88 7 5 7 0 7 77777777777 00 2222222 5 888888888888888888888888888888888888 2 2 5 0 0 2 0 0 00000 5 55 88 55555 2 000 222 2 444444444 7 0 33 3 7 0 55 0 888 0 222222222222222222 00 0 0 0 5 8888888 0 0 0
consensus : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CA----AGGGCT--TG---T-C--G----GACA-GGAGATGTAAA-GACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CATNAG-AGA-GG-T-AT-GCA--GTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTT-T-C-GTCACCAGTAACAATGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAAC-AGCTTTGGCA-ATATC-ACGAATCGTG-NATCTGCCAT-CA-CTTTCAATTATTTCCCCNGA----T------C---C------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCAGAC----CC--AT--------TAANTTCTCCCAATTAA------GTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAAC-CGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTA--TA---N--TTG--GAA--GTN-TTGAATAG-G-T--TCAAGTGTNNNN----------------A---------T--CCACGAAATCGCGC-AAAGCGTT------ATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAGC-CCTCGTA----CG-TCGTT-TAAACT--------------------------AT--AGT---CGTA-CGTTT--GGCTTAA----T--GCTGATGACGAGCAGCTAGATCC-GCC--AGACT--TG---------GA---------A-----TGGA---AAG---TGGTACA-GAGGGGATTGAATATGAA-TGGACAAGT-GGTGCTAT-TGTG---CC--AG--GGAAC--TTATTGG--G--ATTAGATCA--C--GGTTC-GTTATCTTTTA-C-TT-TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGA--T-GAATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
Reference ( family-1073 ) : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CA----AGGGCT--TG---T-C--G----GACA-GGAGATG-ANA-GACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAAGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATGGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CATNAA-AGA-GG-T-AT-GCA--GTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-NTCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TG-T-T-C-GTCACCAGCAACAATGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAAC-AGCTTTGGCA-NTATC-ACGAATCGTG-NATCTGCCATACA-CTTTCAATTATTTTCCCNGA----T------C---C------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCAGA-----CC--AT--------CANNNTCTCCCAATTAA------GTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATATCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA--CGACTGGCTCTATTGCGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTA--TA---N--TTG--AAA--GTT-TTGAA-----------AAG-----------------------A---------T--CCACGAAATCGTGC-AAAGCGTT------ATCGCGCTGTGG-TACAATACA-CATTAC-ATATCCAACAG--CCTCGTA----CG-TCGTTATAAACT--------------------------AT--AGT--NCGTA-CGTTT--GGCTTAA----T--GCTGATGACGAGCAGCTAGATCC-GCC--AGACT--TG---------GA---------A-----TGGA---AAG---TGGTACA-GAGGGGATTGAATATGAA-TGGACAAGT-GGTGCTAT-TGTG---C---GG--GGAAC--TTATTGG--G--ATTAGATCA--C--GGTT--GTTATCTTTTA---TT-TACA-TA-TGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGAAGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGA--T--AATATTC--GATGA-T-ATGATCGTACT--A-TCGAAG-GCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-ATTTACANAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|1 : AAGTGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGATCTTCTGAGCC-CTGACTGA-T-G--ACT-GAGCAAATTTA----AGGGTTAATG---T-CATG----AACA-GGAGATA-ATACGACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGGAAAAGAAAAAG-TCGTAGAAGGCTAGACTCTTGC-GCAGTAT-GGTGGGTGTAGCAAGATGATACCCT--TC--AA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTTACATA-G---A-TGTAGTTTA-TGCT-A--T-TCTCAA-GAGCTTTTT-TAGT---GTAGCATTATTGGTAATACC-GACC-GTAAC----A-CTT-TTGTCC---TAT--AGCATGCGGAAATTTGTAACG--G-CCATACCAT-CATCATTAAGAGAGGG-T-AT-GCA--GTAAAGAA-C-T-T-CTTTG--TGC-T---TATGG-ATCT---TTTGG-CAA----TAC-AGGTCTTC-TA-TG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTTACTTATTGGTTCAAAATAGT-A-ACCC-A-TG-T-T-C-GTCA-CAGCAACAATGTTCGCAAATTGTCTT-TAATTG-AATATAGGAAAACATC-TTC-GA--AAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTATTT-GGTCAATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTTG--TACTT-TCATA-AAT---AC-GCTTCAAAAT--GAAAT---GCACACCAAGA-AGCGATTTACCAAC-AGCTTTAGCA-TTATC-ACGAATCATGAGATCTGCTATACA-ATTTCAATTATTTTCCCCGA----T------C---C------T-----TT-----TGCTTTGCCTGCTACA---GTC-A-AGGTCCATC-AAA-TTTTATCCGGC-ATCTTCGACGGACTCC----GTGCCAGTCAGAAATTTCTTTCT-CA-C-T-ATGAACTG-TTCCAGA-----CC--AT--------TATAATCTCCCAA-TAA------GTGAATCA--TCTGCATTA-CCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-AT--TATCTATAGCT-----ACATTCTC-ACAG-GGTTCCTA-CCATTTTCACAAACAGTGGTCAAC-CAACTGGCTCTATCGCGAAATGACTTAATATTAAGTTTAAAATTATGTGGAACTGTAAGGCT----CATGTTTA---A---T--TT--------GTT-TTGGA-----------AAG-----------------------A---------T--CCATGAAATGGCGC-AAAGCATT------ATCACGCTGTGG-TACAATACA-CATTAC-ATATCCAATA-----TCGCA----CG-TTGTTATAAACT--------------------------ATC-AGT--TTGTA-CATTT--GGCGTAA----T--GCTGATGACGAG-AGCTAGATCT-GCC--AGACT--TA---------G----------A-----TG-------G---TGGTACA-GAGGGGATTGAAT-TGAATTGGACAAGT-GGTGCTAT-TGTG---CCCAAG--GGAACAGTTATTTGACG--ATTAGATCA--CTAGGTTC-GTTATCTTTTGCC-TTATACA-TACTGTGTTGCTTCTGGTGATGATCAGGGAAAAT-GGAACTAATGAGAGTGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGATGT--AATATTT--GATGA-TCATGATCACATTCAG-TTGAAGCGCGT--TAATGCTCAAATTTATGCTAAATTTG-TT-GTTTACATAC----AT-----TCA----TTAATTTGGA-AAC-ATATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|10 : gTCTCGCAATTAA------GTAAA-CA---CTGCATTT-CTGAATCACTGAGCTTTATGCTAACTT--A------TATAAGCTTT-AA--TT---AGATCT-----ACATTCTC-ACAGCATTTCCTAGCCATTTTCAC-AACAGTGGTCAA--CGAATGGCTCTAT--CGAAATGACTT-AT-----GTTTAAAACTATGTGGAGCTG-AAGGCT----CGTATTTATTTA---T--TT---------TT-TTGAA-----------AAGTAACGCTTTTCAAGATTATCATCA---------T--CCATGAAATTGCGC-AAAGCGTT------TTCGCGCTGTGG-TACAATACA-CATGAC-ATATTCAACAGC-CCTCGTA----CG-TCGTTA-AAA--------------------------------------------GTTT--GGCTTAA----T--GCTGATGACAAGCAGCTAGATCC-CTC--AGACT--TGGAAGGGAATGA---------A-----TGGA---AAGT--TGGTACA-GA-GGGATTGAATATGAA-TGGACAAAT-GAAGTTAT-TGTG---
gi|11 : actCATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGG-----TAA---ACGGACAGAAT-GTCACA-GGAC-----AA----AAAG---------T-C--------ACA-GGACATA-AAA-GACGACCA-GAGAAGAACTGCTTAAGTTTTTGG---------------C---CAAGGCTAGA-TCTGGC-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TCTCCA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ACGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCCA------AATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-GAGCTTTTT-TAGT---ATAGCA-TATTTGTAATACCAGGCCGGTAAC----A-CTT-TTGCCC---TTTTAGGCAT-CGT-AATTTGT-ACA--G-CTATACCAT-CA-CATTAG-A-A-GG-T-AT-GCA--GTAAAGAA-C-T-T-CATTG--TGC-T---TACGG-AT
gi|12 : TTTTT-CATACTGGTTCAAAATAGT-G-ACCC-AATG-T-T-TTATCACCAGTAACAATGTTTGTAAATTGTCTGGTGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTTTGGTC-ATCTGTCTATATA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAAC-AACTTTGGCA-ATATC-ACGAATCTTG-CATCTGCCAT-TATCTTTCAATTA-CTTCCCAGAGTT-T------T---CAAGACAT-----TT-----TGCCTTGCCTGTTACA---ATCAATAGGTCGGCC-AGA-TTTTG--CAGTAATCTTTGACAGACTCT----GTG------AGA---TTCTTTCTCAA-C-TGACGAACTG-TCCCA
gi|13 : aAAATGCATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGA-CTTCTGAGCCACAGACTAA-T-G--ACT-AAAC-----CA----AGGGCT--TG---T-C----------A-GGAGATGTAAC-GACGACCA-GAGAAAAACTGCTTAAGTTTT-GGAAAAAGGAAAAAG-TCGTATAAGGCTAGA-ACTGGC-G-AGTAT-GGTGGATGTGGCAAGACGGTACCCTTCTC--CG--ACTTCAAAA-A-------GCA-------------------ATTTGATCGA--GCATT-ATCATA-GAGTAGACGAACAT-ACCTAAAATTTAATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-CAGCTTTTTATAGTATAATAACA-TATCGGTAATACC-GACCGGTAGC----A-CTT-TTGCCC---T
gi|14 : aAAATGCATGCTTAACTTACGTTTCACTCTGATTT-----GGGTAGA-CCTCTGAGCCACTGACTGA-T-G--ACT-GAGC-----CA----AGGGCT--TG---T-----------CA-GGAAATGTAAA-GACGACC-AGAGAATATCTGATTAAG--TTTAAGAAAAAGAAAAAT-TCGTATAAGGCTAGC-TCTGGC-G-AGTAC-GGTGAGTGCGGCAAGACGGTACCCTTCTC--AG--ACTTTTAAA-ATTGCTTCACAAG---C----A--------ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTGATATA-G---A-TGCAGTTTA-TGCTAA--TATCTCAA-AAGCTTTTT-TAGT---ATAGCAT
gi|15 : TGGTTCAAAATAGT-G-ACCCCA-TG-T-T-TTATCACCAGTAACAATGTTTGTAAATTGTCTG-TGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTT-GGTC-ATCTGTCTATACA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAAC-AACTTTGGCA-ATATC-ACGAATCTTG-CATCTGCCAT-TA-CTTTCAATTA-CTTCCCAGAGTTTT------CAGAC------A-----TT-----TGCCTTGCCTGTTACA---ATC-ATA
gi|16 : cAAACTGC-G-ATCC-A-CG-T-TTC-ATCACCTGTAACTATTTCTGATAATCGACGT-GGATCG-CAGTTTGCAAA---TT-TTC-----AATATATATTTGG-CC-A-TCT------TTACGCGGATTCTTTTCT-GATC-ATTTGTCAGCAAA-----TGTGGT-ATCCATCTTGCATTTATC-TTTCGGAGACCT-----A-AAT---GCTTTTTCAAAATTGAAAATATGGTTC-CCGA-----TGATATATCAACTAAATTT-GCA-ATACC-
gi|17 : cCCAA-CCATTTCTACAA-CAGTGGACAA--CGACTGTCTCTATT-TGAA-TGACT--GTA-TAACTTTAAAACTATGTAGAGCTG-AAGGTT----CGTATTTA--TAAC-G--TTGGAAAG--GTA-TTGAATAGGGATATTCAAGAGTACATGT--------------A---------T--CCACGAAATCGTGC-AAAGCGTT------ATCGAGCCATGG-TATAATATA-CCTTAC-ATATCAAAtcttgtggtcaatcacccatcgtcattaacaatttttttttaaatttgttca
gi|18 : CCA-CCT-ATGAACTGGTCCCAGG-----CCTCAT--------TAACTTCTCCCAATTAA------AGAAA-AAAATCTGCATTATCCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A--------ATATCT-----ACATTCTC-ACAGCGTTTTCTA-ACATTTTCAACAACAGTGGTCAACCCGA-TGGCTCTAT--CGAAATGATT
gi|19 : CATTCGAAAACTTCATTCTTTA-CCT-ACGAACTG-TCTCATAACATACC--ATATCAGACCCATAAACTTCAACTTAATTTTCAGTAAA-AA--TCTGCATTA-CCGAATGATTGAGTTTTGTGCTAACTTTTATTCATGTATCA-CTTC-----TA---ATTCCTTATAAATATTCTCGAC-TCGTTTTCTA-aa
gi|2 : CATAGTTT-GCTTCCAGTTGTTTT---TATTGGATC-AAAT----------------T-T-C-GTAACCAGCAACAATGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAACCTTT-TTA-AA--AAT---TGCTTAG-CGGA-T-A------GTACTCATACTCGTTTTT-GGTC-TTCTACCAATATA-----TGCGGT-ATGTATCTAGCAGAAATATTTT-G--TACTT-TCA-A-A-C---AT-GCTTCAAAAT--GAAAT---GC--------------------CAAC-AGCTTTGGCA-ATATC-ACGAATCGTG-TATCTGCCAC-TA-TTTTCAATTATTT-CCCTGA---------------C------G-----TT-----TGCCTTGCCTGTAACA---GTC-ACAGGACCGCC-AGA-TTTTG--CCAC-ATCTTTGACAGACTCA----GTGCCAGTCAGAAATTTCTTTCTCCACC-T-ATGAACTG-CCCCAGAC----CC--AT--------TAATTTCTCCCAATTAA------ATAAA-AA--TCAGTATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-ACGGTA---ATAACT-----ACATTCTC-ACAGCTTTTCTCAGCCATTTTAAC-AACAGTGGTCAA--TGACTGGCTCTACT--GAAATGAC----TA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----TGTGTTTA--TACTGT--TTGA-AAA--GTA-TTGAATAGAGCTTTTCAAGAGTATCGTC--------------A---------T--CCACCAAATCGTGC-AAAACATT------ATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAGT-CCACGTA----CG-TCGTT-TAAACTTTGNNNNNNNNNNNATTACATATCGAAC--AGTCCACGTA-CGTC----GTTCAAACTTT--GCTGATGACAAGCAGCTAGATCC-CCC--AGACT--TG---------GAAGGGAGTGGA-----TGGA---AAGT--TGGTGCA-CAGG----------------GGACAAAT-GGCGCTAT-TGTG---CCA-CA--GGAAC--TTATTGac
gi|2 : CTTTGN-NNNNNNNNN-NATTAC-ATATCGAACAGT-CCACGTA----CG-TCGTT-CAAACT----------------------------------------------------T------T--GCTGATGACAAGCAGCTAGATCC-CCC--AGACT--TG---------GA---------A-----------------------------GGGA------GTGGA-TGGA-AAGTTGGTGC-------A---C---AG--GGGAC--AAATGGC--GCTATTGTGCCA--C--AG----G--AACTT--A---TT-GACA-TAATATGT-GCTTCTGGTAATGAGCAGGG-AAAT-GGAACTGATGAAGATGGGGATGGAGTGGA-A-A-TGAACAAT-CTGATCGA--TTAGATATTA--GATGATT-ATGATCATacataatatgtgcttctggtaatgagcagggaaatggaactgatgaagatggggatggagtggaaatgaacaatctgatcgattagatattagatgattatgatcatgatgatgactgatttgataatgctcactttattactgatttg
gi|20 : catagtttgcttccagttgtttttattggatcaaatttcgtaaccagcaacaatgtttgcaaattgtctttgattgaatttaggaaacctttttaaaaattgcttagcggatagtactcatactcgtttttggtcttctaccaatatatgcggtatgtatctagcagaaatattttgtactttcaaacatgcttcaaaatgaaatgccaacagctttggcaatatcacgaatcgtgtatctgccactattttcaattatttccctgacgtttgccttgcctgtaacagtcacaggaccgccagattttgccacatctttgacagactcagtgccagtcagaaatttctttctccacctatgaactgccccagacccattaatttctcccaattaaataaaaatcagtattaccgaatcactgagttttgtgctaacttttatataagctttacggtaataactacattctcacagcttttctcagccattttaacaacagtggtcaatgactggctctactgaaatgactataagtttaaaattatgtggagctgaaggcttgtgtttatactgtttgaaaagtattgaatagagcttttcaagagtatcgtcatccaccaaatcgtgcaaaacattatcgcgctgtggtacaatacacattacatatcgaacagtccacgtacgtcgtttaaa-CATGAA-AAG-AA-T-AT-GTA--ATAAAGAA-C-CGT-CTTTG--TGC-T---GATGA-TTCT---TTTGG-CAA---CTAT-AGGCCTTC-TACTG-TATTTAGTTAGCCATATTAT-GTTTCCAATTTTCT---TTATTGCTTCGAAATAGTAA-ACTC-A-TGTT-T-T-GTCCTCAGCAACGATGTTAGTAAATTATCTT-Tgatgatgactgatttgataatgctcactttattactgatttg
gi|21 : AGAA-C-T-TTCTTTG--TGC-T---C-TGGCATAT---TCTTG-CTA---TTCCTTGACGTTC-C-CCT-TGTTCAGTCACCCACACCTT-G---TCAATTTTTCT-TTGA--GTTTCAAAGTAGT-GTACCC-A-CGTT-T-C-ATCACCTGTAACTATTTCTGATAATCGACGT-GGATCGCAGTTT
gi|22 : tgcTACCCGTATTT-GGTC-ATCTGTCAATATACCGTATGTGAT-GTGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCAAGATAGCGATATGCCAAC-AGCTTCAACA-TTATC-ACGAACCATG-GATCTGCTAT
gi|23 : aGTAATTCC-GACCAGTAACGAAAA-CCTGTTACCCGGCTTC--GACAC-CGGAATTATGTACCGCAG-CTATAACA------ATAAA-CGG-GG-c
gi|24 : AATTCA------CTAAA-AA--TCTGCATTA-CCGAATGATTAAGTTTTGTACGAACGTTTA------TATAAGCTCTAA---TA---Aaggagaatataacaataacaatccttattatagtggagtctatgaaggttcatttg
gi|24 : GACTGGCTTTATTG--AAATGACT----------------ATTA-GTGAAGCTG-AAGGCT----CATGTTTA--TACT-G--TTG--GAA--gactggctttattgaaatgactattagtgaagctgaaggctcatgtttatactgttggaaa
gi|25 : aattcactaaaaatctgcattaccgaatgattaagttttgtacgaacgtttatataagctctaataaTTTCACTCTGATTTTATTTGGGTAGA-CCTCGGAGCC----ACTGA-TCG--ACT-GAGC-----CA------------------------------A-GGAGATGTAAC-GATAACC-AGAGAAGAACTTCTTAAGTTT---------------AG-TCGTGTAAGGCTAGA-TCTGGA-G-AGTAa
gi|26 : AGATG-AAGGCTGAGACGTGTTTA--TA---CCGTTA--GAA--GCTATTCAA-----------CAGTATCGTC----------------A---------T--CCGCGAAATCGTGCCAAAGCATT------ATGGCGCTGTGA-TACAATACATTATTAC-ACATCGAACAG--CC
gi|27 : CTGCCAT-CA-CTTTCAATTATTTCCCTGAA----TTTGGGAC---A------T-----TA-----T-CCTTGCCTGTTACA---GTA-ACAGGTCGGCC-AGA-TTGTG--CTGC-ATCTTTGATGGACTCT----GTGCCAGCCAGAAATTct
gi|28 : AAAGTTATGC-AAATTTG-TTTGTTTACATACTTTAAT-----TAA--TGTTAATTTG-A-AAC-GTATCACT-ACTCAAAACTATATATGC-AAACTTG-TTTAT-TTGCATGAATTGATATTTAct
gi|29 : TG-AAGGCT----CATGTTTA--TA---CCATTG--GAAAGGTA-TTGAGTAGAGCTAATCAAG-----------------------AGTATCATCAT--CCACAAAATTGTGC-ACAATATT------ATTGTGGCGTGG-TACAATACA-CATTAC-c
gi|3 : TGATTT-----GGGTAGA-------AGTTGGAGA-TGA-T-G--A-T-GAGC-----TATTTAAGGGCT--TAAAAT-T--GTAATGATAAGGAGATGTAAA-GTC-----AGAGA-GAA-TGATTTAGTTTT--GGAAAAGGAAA--G-T-GTATAAGG-TAG--TATGGT-G-AGT-T-GGTGGGTGTGG-AAGACGATA---T--TT--AA--ATTTAAAAACATTGATT---AAG--TA----AGATGT----TGTG-TGGA--G-ATT-ATAAAA-AAGTAGACGAA--T-GC----------ATG-TGA---A-G---A-TGTAGTGTA-TGA------GTTTAAA-GAGTTTTTTGTATT---ATTAGAATATTGGTA-TA---GAA-GGTAAA----G---T-TTGAAT---TTA--GGT----GGA--TTTGTA-CG--G--TATA---------ATAAATAGA-GG-T-AT-GTA--GT-AAGA----T-T-TTTTG--TG--T---TATGG-A------TTTGG--A------AT-AG---TTA-TATCG-TGTTTAATTAG--ATATTTT-GTT---AAAATTTTT-ATTATTAGTT---AAT-GT-A-A----A-TG-T-T-T-GTAA--AG--AC--TGTTTG-AAATTGTTTT---ATTG-AATATAGGAA---ATT-TT---AGAAAT---TG-TTAG--G-G-T-T------GTA-TAGTA-ATGTATTT-GGT--ATCTGT-AATAT------TGTGGT--TG-A--TGG-AGAAAT-TTTTTG--T--TT-T---A-AAT---AT-GTT---AAAT--GAAAT---G
gi|30 : TAAGTTTT-GAAAAAAGGAAAAAGGTTGCATGGGGCGAAA-TTTGGAAG-AGTAT-GATGGGTATGGCAAGACAGTAACCT--TC--AATGACTTCAAAA-ATTGCTTCACACG-CTC----Aaaagaaggatttgcaaatattagattatagaatatattgtgtatattaattttaactgattttgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaagtcagattttttatatgaatgtaggcattaatttatagtaaaaatatgtaagataattagttttgtgtaattttatataagattaatattattt
gi|31 : ACAAGACTC----AGATGCTCCATGTGGTGGGAGGCATT-ATCATGGAAGTTGACGAACAT-GCCTA------AATCCT-ATTTA-T---A-AATAACTTA-T-AT-A--AATCTT---GAGCTTTTT-T
gi|32 : GTCAT-TGCTTG-AATTTAG-AAAATATT-TTG-GGG-AAT---TGCATAG-TG-AAC-T------GTACTCTTGCCCGTTTTT-GATC-ACCTGTCAATATA-----TCCGGA-ATGCATCAGGCAGAtg
gi|33 : -CA-CATTAG-A-A-GG-T-AT-GCA--GTAAAGAA-C-C-C-CTTTG--TGC-T---TACGG-ATGT---TTTGG-CAA---TTAC-AGTTCTTC-TATCG-TGTTTATTTAGCCATATTTT-GCTTCCAA
gi|34 : -ATCATG-AAGTAGACGAACAT-GCCTA------AATCCGGACACA-G---G-CATCGTTTA-TGAC-A--TTTCTTA---AGCTTTTT-AAGT---ATAACATC-TCGGTAATACC-GACCTGTA
gi|35 : ATCTGCCAC-CG-CTCTCGATTATTTCCCCCGA---------------C------T-----GT-----TGCCTTGCCTGTTACA---GTC-ACA-------------TTTTG--CTGA-ATCTTTGACGGTCTCT----GTGTCAGTCAAA
gi|36 : cT-GCTTCCAATTTTT---CTTATTGG------------A-ACCT-A-TG-T-TTC-GTCACCAGCA-CAATGTTTGCAAATTGCCTT-TAATTG-AATTTAGG-AAACAAT-TTC-t
gi|37 : TT-CTTATTGGTTCGAAATCGTGA-ATCC-A-TA-TAT-C-GTCACCAGTAACGATGTTTGCAAATTGTCTT-TGATTa
gi|38 : tga--ACTTCAAAA-ATCGCTTCACAAC-CTCTGTCAGATGT---ATATTGTGGA--GCATT-ATCATG-AAGTAGACGAACAT-G
gi|39 : CGTT------ATCGCACTGTGG-TACAATACC-CATTAC-CCATCAGACAAC-CCTCGTA----
gi|4 : acGATTT-----AGGTTGA-CTTCCGAGGCACCGACTGA-T-G--GCT-GAGC-----CA----AAGGCT--TG---T-C--G----G-----GACTTG-TAATGACGACCAAA------------TA----TTTGGAAAAAAG-------TTGCATGAGGCTAGA-CCTGGA-G-AGTAT-GGTGGGTGTGGCAAGACGGTA--------------ACCTC-------CG----ACGA--CT--------TG------GTAATGGA--GCATT-ATCATG-AAGTAGACGAGTAT-GCCTA------AATCCTGATACACG---G-CGTCGTTT---GAT-A--TTTCTTGA-GA---TTTT-TAGT---ATAA-AGTCTCGGTGATACC-GACCTGCAAA----A-CTT-TTGACC---TTC--GGCAC-CAGAA-TTTATA-TG--G-CTATACTAT--------------------AT-GCA--ATGAAGAA-CAT-T-CTTTG--TGCATGCGTATGG-TTCT---TTTGG-CAAGTTCTAG-AAGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GTTTCCAA--TTTTT-CATACCGGTTCGAAATAGTGA-ACCC-A-TGTT-T-C-GTCACCAGTAACAATGTTTGCAAATTGTCTT-TGATTG--ATTTTGAGAAACATT-TT--GAGCAAT---TGCTTAG-CA-A-T-TTGTATAATACTCATACACGGTTTT-G
gi|4 : ATGTCAAA-GGCTTTGGCA-ATATC-ACGAATCGTG-TATCTGCCAT-CA-CTTTCAATTATTT-CCCTGA----C------C---T------T-----TTAAACATGGCTTGCCTGA-ACAA--GTC-ACAGATCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACCCT----ATGCCAGTCAGAAAATTCTTTCTCCACC-T-ACGAGTTA-TCTCAtgttgttgtttcgtttgcttgtttgtttgtttcaaatgtcaaaggctttggcaatatcacgaatcgtgtatctgccatcactttcaattatttccctgaccttttaaacatggcttgcctgaacaagtcacagatcggccagattttgctgcatctttgacggaccctatgccagtcagaaaattctttctccacctacgagttatctca
gi|41 : gatttaggttgacttccgaggcaccgactgatggctgagccaaaggcttgtcgggacttgtaatgacgaccaaatatttggaaaaaagttgcatgaggctagacctggagagtatggtgggtgtggcaagacggtaacctccgacgacttggtaatggagcattatcatgaagtagacgagtatgcctaaatcctgatacacggcgtcgtttgatatttcttgagatttttagtataaagtctcggtgataccgacctgcaaaacttttgaccttcggcaccagaatttatatggctatactatatgcaatgaagaacattctttgtgcatgcgtatggttcttttggcaagttctagaagccttctaccgtgtttagttagccatattttgtttccaatttttcataccggttcgaaatagtgaacccatgtttcgtcaccagtaacaatgtttgcaaattgtctttgattgattttgagaaacattttgagcaattgcttagcaatttgtataatactcatacacggttttgtgttgttgtttcgtttgcttgtttgtttgtttcaa-TACAACACA-CATTAC-ATATCGAACAGC-CCTCGTA----
gi|42 : GTAGTTTAATGCT-AG-TATCTCAAAGAGCTTTTT-TGGC---ATAACATttcttccgtgttta
gi|43 : t-T-ATGAATTG-TCCCAGAC----CC--AT--------TAACTTCTCCCAATTAA------a
gi|5 : -ACCATG-AAGTAGATGAACAT-GCCAA------AATACTGACACA-G---GGTGTTGTTTA-TGGC-AAGTAGTTCTT-GAGCGTTTT-TAAT---ATAACAT-ATCAGTAATACC-GACATGTAAC----A-CTG-TTGCCC---TTC--GGCAC-CGGAA-TTAGTA-CG--G-CTTTACCAT-CA-CATGAG--GA-GAAT-AT-GCA--ATAAAGAA-C-----CTTTG--TGC-C---TATGG-TTCT---TTTGG-CAA---CTAC-AGACCTTC-TGCCG-TGTTTAGTTAGCCATATTTT-ATTTCCAA--TTTTT-ATTACTGGTTCGTAATAGTGA-ACGC-A-TGTT-T-T-GTCACCAGTAATAATGTTTGCAAAC--CTTT-TGGTTG-AATTT-GGGAAACATG-TT--GAGCAAT---TGTTTGG-T----T-T------GTACTCGTACCCGTTTTT-AGTC-ATC---------------TGTGAT-------------GAAGT----TCG--TACTT-TCA-----------------AAGAT------T---GCTC-CCGCGATAG-----------C-AGTTTTAGCA-GTATC-A-------------CTACCATA-A-CGTTCAATTATTTCTCTGGC----T------T---G------TAGACATT-----TGCCATGCCCGTAACAGTCGTC-ACAGTTCGACT-AGA-TTTTG--CTGC-ATCTTTCACAGACTTTACAGGTGTCAGTCAAAATTTTCTCTCTCCATC-T-ACGAACTG-TCTCA
gi|6 : C-AAAGCATT------ATCGCGCTGTGGGTACAATACA-CATTACGATATCCAACAGGCCCTCGCAAGCACGGTCGTT-TAAACT--------------------------ATGAAGT--T-GTAACATTTTGGGCTTAA----TCCGCTGATGACGAACAGCTAGATTCTGCCGCAGACT--TA---------GA---------AGAGAATGAATGTAAGAGATGGTACATGAGGGGATTGAATATGAA-TGGACAAGT-GGTGCTAT-TGTGCCAC---AG--GAAAC--TTATT----G--ACTAGATCAAGC--TGTTTCGTTATCTTTTAACCTT-TACAGTACTGTGGTGCTTCTGGTGATGAGCAGGG-AAATGGGAACTAATGAAGAAGGGGATGAAATGGATA-ATTGAACAGTCCTGATCAA-----A----TC--AATGA---ATCACCGCATC--AGTCGAAGCGCGTTGTAATGCTCAGAATTATGC-AAATTTGTTT-ATTTACAAAC----ATTCATATAA--T-TTGATTTGGATAACGGTATTACTAACTCAAAATTAT----GCAAAAATTG-TTTATGTTACAAGAATTGATATT
gi|7 : aTT-ATA-TAAGATTAATATTATTTAG-------------------GTTTA--TA---A----G--AA----TT-TTAAA-----------AAGTGGTAAAG---------------A---------TGGTTATGAAATGATGA-AAAA-ATTGAAAAGAT-ATGGTGTGG-T-TAATA----ATTA--ATATA-AAGAG--------A----TG-TGATT-TAAA-T--------------------------AT--AGT--GTGTA--ATTT--GG-TTAA----T--GATGATGA-GAG-AGCTAGATTA-GAT--AGAGAGATA---------GA---------A-----TGGA---AAG---GGGTAAA-GAGGG--TTGAATA--GA-TG---AAGT-GGTG-TATATGTG---C---AGATGGAA---TTATTAG--A--ATAAGAT-A--T--GGTTA-GTTAT-TTAAA---TT-TAAA-T----TGTTGATT-TGGTGATGAGGAAGG-GAAT-GGA--TGATGAAGAAGGGGATG-AGTGGA-ATA-TGAA-AGT--TGAT--A--TGGAATATTTTGGATAA-T-ATG-TCA---T--A-TTGAAGAGCGT--T-ATGAT-AAATTTATG--AAATTTG-TT-A-TTAAACAT----AT-----TTAATT-TTGCTTT-GA-AAC-GTATTATT-A---AAAATTAT----G---AAATTGTTTTAT-TT--AAGAATTGATATTT
gi|8 : taattAAATGCATGCTTAATCTCAGTT--ACTC--GTTT-----GAGTAGC-CGTCTGAGTCACTGACTGA-T-GC-GCTTGAGC-----CA----AGGGCT--TC---TTC--GT---GACT-TG---TA-ACG-TAAGACCA-GATCAGA-CTTCTTAAGTTTT---GAAAAAAGAAAAG-TTGT-TAAGGCTAGA-ACTGGA-G-AGTATTGGTGGGTATGGCAAGGCGGTGCC-----------------------TC-CTTCACAAG-TTC----AGATGT---ATATGAT-GA--ACATTAATCATA-AAGTAGACAAACATGGCCTA------AATGCTGACACA-GGGCA-AATCGTTTA-TGAT-A--TTTCT--A-GA-----------T---AT-ACA-TATCGATAATACC-AACCGGTAAT----ACCTT-TTCCCC---TTT--GGCAC-CGG--ACTTGTTACG--GCCTATA-CATCCA-TATTAG-AAG-GA-T-AT-GCA--ATAAAGAACC-T-T-CTTTG--TGC-T---TATGG-TTCTGGCGTTGG-CAA---CTAC-A-GCATTC-TACCG-TA-TTATCTAACCATA-TTT-GCCTCCA---TTTTT-CTT
gi|9 : aA-AAA-GG-TTATTGCATAGTAAAGAA-C-T-TTCTTTAGTTGT-T---TACTG-ATCT---TTTGGGCAAG--CTAC-AGGTCTTCCTATCGGTGTTTAATTAGCCATATTTTTGCTTCCAATTTTTTC-TTAATTGGTTCAAAATAGT-A-ACCC-A-TGTT-T-C-GTCAACAGCAACAATGTTTGCCACTTGTCTT-TAATTG-AATATAGG-AAACATT-TTC-AAGAAAT---TGCTTAGTCGAA-T-T------GT-CTCGTACCCGTATTT-GGTC-A-------------------TGGTAATGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AATAAAAT-GCTTCAAAAT--GAAAT---GCAC-CCAAGA-AGCGATTTGCCA---AGCTTTTACATCTATCAACGAATCATA-GATCTGCTAT-CA--TTTCAATTA-TTTCCCCGA---------------C------T-----TT-----TGCATTGCCTGCTACA---GTC-ACCGGTCCATCAAGATTTTTC--CTAA-ATGTTCGACGGACTCC----GTGCCAGTTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|40 ): AGATACTTTATCATACCAATGCTTTGACTAAACTTGCTGAAACTTTGTA
Unaligned ( gi|44 ): GTAACACATAATCTTTTAAAGATTTGATTGTAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111
lowQualScore : 111111 111 11 22222 666666666666666666666 11 111111111111 22222222222222 11111111 1111 111111 111111 1111 1 1111 111 11 11111 1111 111 222222 222222222222222 111111 11 1111111111 1111 666666666666666666666666666666666666 11111 111 1111 111 222222222222222 111111 3333333333 11111 1 1 222 1111 222222 1111 22222222222222222222222222222222222222222222222222222222222 111111 1111 3333333333333333333333333333333333333333333333333333 1111111 777777777777777777777777777777777777777 22222222222 11 3333333 222222 222222 11 1 1 1 11111 11 3333333 111 222 22222222 11 11 1 111 333333333333333333 1 1 1 2222222 1 1
lowQualScore : 555555 111 0 5 2 5 5 11 5 33333 1 222222222222222222222 0 0 9 55 3 3 999999999999 4 0 0 4 55 4 5 77777777777777 2 4 1 1 1 22222222 1 1111 5 66 3 3 3 111111 0 4 111111 3 1 2222 3 6666 7 777 0 0 4 5 0000 5 5 888 888 5 888 77 77 5 7 9999 5 2 77777 5 4 99999 55 4 777 1 55 777 4 4444 4 1 4 0 4 3 0 0 7777 2 2 222 3 3 3 1 2 3 4 2 999 7 111111 777 000000000000000 0 3 4 1 000000 66 3 22 66 8 999 777 4 66 777 6666666666 5 3 77777 4 3 44 4 2 3333 3 77 55 3 999999999999999999999999999999999999 11111 2 222 4 2 5 5 66 5 0000 0 555 1 999 4 4 777777777777777 6 1 5 66 5 77 5 0 6 666666 1111111111 1 66666 8 0 3 5 0 111 2 9999 444444 5 0000 66 00000000000000000000000000000000000000000000000000000000000 77 1 1 5 0 222222 0 3 3 3 2 66 0000 6 6 5555555555555555555555555555555555555555555555555555 5 4444444 6 99 99 99 666666666666666666666666666666666666666 6 2 444 88 6 2 6 1 6 00000000000 11 2222222 2 999999 3 2 3 9 444444 33 0 55 0 3 2 0 0 3 1 7 22222 2 22 22 0000000 888 333 3 88888888 0 88 7 6 1 22 0 111 1 888888888888888888 55 0 0 0 2 3333333 0 0 7
lowQualScore : ...... ... . . . . . .. . ..... . ..................... . . . .. . . ............ . . . . .. . . .............. . . . . . ........ . .... . .. . . . ...... . . ...... . . .... . .... . ... . . . . .... . . ... ... . ... .. .. . . .... . . ..... . . ..... .. . ... . .. ... . .... . . . . . . . . .... . . ... . . . . . . . . ... . ...... ... ............... . . . . ...... .. . .. .. . ... ... . .. ... .......... . . ..... . . .. . . .... . .. .. . .................................... ..... . ... . . . . .. . .... . ... . ... . . ............... . . . .. . .. . . . ...... .......... . ..... . . . . . ... . .... ...... . .... .. ........................................................... .. . . . . ...... . . . . . .. .... . . .................................................... . ....... . .. .. .. ....................................... . . ... .. . . . . . ........... .. ....... . ...... . . . . ...... .. . .. . . . . . . . . ..... . .. .. ....... ... ... . ........ . .. . . . .. . ... . .................. .. . . . . ....... . . .
lowQualScore : 888888 222 2 1 8 0 0 99 0 11111 4 666666666666666666666 2 4 4 66 1 4 777777777777 4 9 8 4 44 4 0 11111111111111 0 4 7 1 1 44444444 1 2222 3 11 6 6 6 555555 5 0 111111 6 0 7777 9 2222 3 000 7 1 4 7 6666 0 0 888 333 7 666 11 99 7 9 3333 0 8 55555 0 0 88888 55 0 000 2 44 888 4 1111 4 9 4 9 4 6 4 9 2222 2 3 888 1 1 1 4 9 3 9 6 111 3 111111 000 888888888888888 5 6 0 0 777777 33 9 11 11 9 888 888 4 11 888 7777777777 7 6 66666 0 9 11 0 3 4444 3 88 00 6 000000000000000000000000000000000000 11111 2 222 4 5 0 0 99 0 6666 2 666 4 666 4 4 888888888888888 7 0 7 99 7 99 7 7 6 444444 3333333333 0 77777 0 8 3 6 6 222 5 3333 333333 0 6666 99 00000000000000000000000000000000000000000000000000000000000 99 7 4 0 7 888888 1 6 6 6 3 33 6666 7 7 7777777777777777777777777777777777777777777777777777 2 3333333 7 22 22 22 555555555555555555555555555555555555555 7 5 777 88 7 5 7 0 7 22222222222 00 2222222 5 222222 2 5 2 8 000000 88 0 88 2 2 5 0 0 2 0 0 00000 5 55 88 0000000 000 222 2 33333333 7 33 3 7 0 55 0 222 2 222222222222222222 00 0 0 0 5 8888888 0 0 0
consensus : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-C--G----GAC-AGGAGATGTAACGACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTAT--A---NC-TTG-GAA--G-TNTTGAATAG----G--T-TT---CA--AG--TA-TCGTC--AT--CCACGAAATCGCGC-AAAGCGTT------ATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACT--------------------------AT--AG-T-T---GTA-CGTTT--GGCTTAA----T--GCTGATGACGAGCAGCTAGATCC-GCC--AGACT--TG---------GA---------A-----TGGA---AAG---TGGTACA-GAGGGGATTGAATATGAA-TGGACAAGT-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
Reference ( family-1073 ) : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-C--G----GAC-AGGAGATGTAAAGACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAANTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTAT--A---N--TTG-GAA--G-TNTTGAATAG----G----TT---CA--AG--TG-TNNNN--AT--CCACGAAATCGCGC-AAAGCGTT------ATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACT--------------------------AT--AG-T-C---GTA-CGTTT--GGCTTAA----T--GCTGATGACGAGCAGCTAGATCC-GCC--AGACT--TG---------GA---------A-----TGGA---AAG---TGGTACA-GAGGGGATTGAATATGAA-TGGACAAGT-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|1 : AAGTGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGATCTTCTGAGCC-CTGACTGA-T-G--ACT-GAGCAAATTTAAGGGTTAAT---GT-CATG----AAC-AGGAGATAATACGACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGGAAAAGAAAAAG-TCGTAGAAGGCTAGACTCTTGC-GCAGTAT-GGTGGGTGTAGCAAGATGATACCCT--TC--AA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTTACATA-G---A-TGTAGTTTA-TGCT-A--T-TCTCAA-GAGCTTTTT-TAGT---GTAGCATTATTGGTAATACC-GACC-GTAAC----A-CTT-TTGTCC---TAT--AGCATGCGGAAATTTGTAACG--G-CCATACCAT-CATCATTAAG-AGAGGG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TATGG-ATCT---TTTGG-CAA----TAC-AGGTCTTC-TA-TG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTTACTTATTGGTTCAAAATAGT-A-ACCC-A-TG-TTCGTCA-CAGCAACAA-TGTTCGCAAATTGTCTT-TAATTG-AATATAGGAAAACATC-TTC-GA--AAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTATTT-GGTCAATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTTG--TACTT-TCATA-AAT---AC-GCTTCAAAAT--GAAAT---GCACACCAAGA-AGCGATTTACCAA---C-AGCTT-TAGCA-TTATC-ACGAATCATGA--GATCTGCTATACA-ATTT--CAATT-ATTTTCC--------CCGA---T------CC------T-----TT-----TGCTTTGCCTGCTACA---GTC-A-AGGTCCATC-AAA-TTTTATCCGGC-ATCTTCGACGGACTCC----GTGCCAGTCAGAAATTTCTTTCT-CA-C-T-ATGAACTG-TTCCA---------------GA-C-CATTATAATCT-CCCAA-T--AAGTGAATCA--TCTGCATTA-CCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-AT--TATCTATAGCT-----ACATTCTC-ACAG-GGTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCAACTGGCTCTATCGCGAAATGACTTAATATTAAGTTTAAAATTATGTGGAACTGTAAGGCT----CATGTTTA---A---T--TT-------G-TTTTGGA------------------A--AG------------AT--CCATGAAATGGCGC-AAAGCATT------ATCACGCTGTGG-TACAATACA-CATTAC-ATATCCAATA-----TCGCA----CG-TTGTTATAAACT--------------------------ATC-AGTT-T---GTA-CATTT--GGCGTAA----T--GCTGATGACGAG-AGCTAGATCT-GCC--AGACT--TA---------G----------A-----TG-------G---TGGTACA-GAGGGGATTGAAT-TGAATTGGACAAGT-GGTGCTAT-TGTGC--CCAA-G--GGAACAGTTATTTGACG--ATTAGATCA---CTAGGTTCGTTATCTTTTG--CCTTATACA-TACTGTGTTGCTTCTGGTGATGATCAGGGAAAAT-GGAACTAATGAGAGTGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-GTA-ATATTT--GATGA-TCATGATCACATTCAG-TTGAAGCGCGT--TAATGCTCAAATTTATGCTAAATTTG-TT-GTTTACATAC----AT-----TCA----TTAATTTGGA-AAC-ATATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|10 : gACTTCT-CGCAATT--AAGTAAA-CA---CTGCATTT-CTGAATCACTGAGCTTTATGCTAACTT--A------TATAAGCTTT-AA--TT---AGATCT-----ACATTCTC-ACAGCATTTCCTAGCCATTTTCACAA-CAGTGGTCAA-C-GAATGGCTCTAT--CGAAATGACTT-AT-----GTTTAAAACTATGTGGAGCTG-AAGGCT----CGTATTTATTTA---T--TT---------TTTTGAAAAGTAACGCTT-TT---CA--AGATTA-TCATC--AT--CCATGAAATTGCGC-AAAGCGTT------TTCGCGCTGTGG-TACAATACA-CATGAC-ATATTCAACAG-CCCTCGTA----CG-TCGTT-AAAA----------------------------------------------GTTT--GGCTTAA----T--GCTGATGACAAGCAGCTAGATCC-CTC--AGACT--TGGAAGGGAATGA---------A-----TGGA---AAGT--TGGTACA-GA-GGGATTGAATATGAA-TGGACAAAT-GAAGTTAT-TGTG
gi|11 : CATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGG-----TAA---ACGGACAGAAT-GTCACA-GGAC-----AAAAAG---------T-C--------AC-AGGACATA-AAAGACGACCA-GAGAAGAACTGCTTAAGTTTTTGG---------------C---CAAGGCTAGA-TCTGGC-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TCTCCA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ACGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCCA------AATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-GAGCTTTTT-TAGT---ATAGCA-TATTTGTAATACCAGGCCGGTAAC----A-CTT-TTGCCC---TTTTAGGCAT-CGT-AATTTGT-ACA--G-CTATACCAT-CA-CA-TTAG-A-A-GG-TATGCAGTAAAGAA-C-T-T-CATTG--TGC-T---TACGG-AT
gi|12 : TTTTT-CATACTGGTTCAAAATAGT-G-ACCC-AATGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTGGTGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTTTGGTC-ATCTGTCTATATA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TATCTTT--CAATT-ACTT-CC--------CAGAGTTT------TCAAGACAT-----TT-----TGCCTTGCCTGTTACA---ATCAATAGGTCGGCC-AGA-TTTTG--CAGTAATCTTTGACAGACTCT----GTG------AGA---TTCTTTCTCAA-C-TGACGAACTG-TCCCA---------------
gi|13 : aAAATGCATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGA-CTTCTGAGCCACAGACTAA-T-G--ACT-AAAC-----CAAGGGCT--T---GT-C-----------AGGAGATGTAACGACGACCA-GAGAAAAACTGCTTAAGTTTT-GGAAAAAGGAAAAAG-TCGTATAAGGCTAGA-ACTGGC-G-AGTAT-GGTGGATGTGGCAAGACGGTACCCTTCTC--CG--ACTTCAAAA-A-------GCA-------------------ATTTGATCGA--GCATT-ATCATA-GAGTAGACGAACAT-ACCTAAAATTTAATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-CAGCTTTTTATAGTATAATAACA-TATCGGTAATACC-GACCGGTAGC----A-CTT-TTGCCC---T
gi|14 : aAAATGCATGCTTAACTTACGTTTCACTCTGATTT-----GGGTAGA-CCTCTGAGCCACTGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-----------C-AGGAAATGTAAAGACGACC-AGAGAATATCTGATTAAG--TTTAAGAAAAAGAAAAAT-TCGTATAAGGCTAGC-TCTGGC-G-AGTAC-GGTGAGTGCGGCAAGACGGTACCCTTCTC--AG--ACTTTTAAA-ATTGCTTCACAAG---C----A--------ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTGATATA-G---A-TGCAGTTTA-TGCTAA--TATCTCAA-AAGCTTTTT-TAGT---ATAGCAT
gi|15 : TGGTTCAAAATAGT-G-ACCCCA-TGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTG-TGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTT-GGTC-ATCTGTCTATACA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TA-CTTT--CAATT-ACTTCCCAGAGTTTTCAGA-----------C------A-----TT-----TGCCTTGCCTGTTACA---ATC-ATA
gi|16 : cAAACTGC-G-ATCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCG-CAGTTTGCAAA---TT-TTC-----AATATATATTTGG-CC-A-TCT------TTACGCGGATTCTTTTCT-GATC-ATTTGTCAGCAAA-----TGTGGT-ATCCATCTTGCATTTATC-TTTCGGAGACCT-----A-AAT---GCTTTTTCAAAATTGAAAATATGGTTC-CCGA-----TGATATATCAA---CTAAATT-T-GCA-ATACC-TC---TTGTGGTCAATCACCCAT-CGTCATTAACAATT-TTTT
gi|17 : cCCAA-CCATTTCTACAA-CAGTGGACAA-C-GACTGTCTCTATT-TGAA-TGACT--GTA-TAACTTTAAAACTATGTAGAGCTG-AAGGTT----CGTATTTAT--A---ACGTTG-GAAAGG-TATTGAATAG----GGATATT---CA--AG--AG-TACATGTAT--CCACGAAATCGTGC-AAAGCGTT------ATCGAGCCATGG-TATAATATA-CCTTAC-ATATCAAAtttaaatttgttca
gi|18 : CCA-CCT-ATGAACTGGTCCCA---------------GGCCTCATTAACTTCT-CCCAATT--AAAGAAA-AAAATCTGCATTATCCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A--------ATATCT-----ACATTCTC-ACAGCGTTTTCTA-ACATTTTCAACAACAGTGGTCAACCCGA-TGGCTCTA-T-CGAAATGATT
gi|19 : CATTCGAAAACTTCATTCTTTA-CCT-ACGAACTG-TCTCATAACATACCATATCAGACC-CATAAACTTCAACTTAATTTTCAGTAAA-AA--TCTGCATTA-CCGAATGATTGAGTTTTGTGCTAACTTTTATTCATGTATCA-CTTC-----TA---ATTCCTTATAAATATTCTCGAC-TCGTTTTCTA-aa
gi|2 : CATAGTTT-GCTTCCAGTTGTTTT---TATTGGATCAAA-----------------TTTCGTAACCAGCAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAACCTTT-TTA-AA--AAT---TGCTTAG-CGGA-T-A------GTACTCATACTCGTTTTT-GGTC-TTCTACCAATATA-----TGCGGT-ATGTATCTAGCAGAAATATTTT-G--TACTT-TCA-A-A-C---AT-GCTTCAAAAT--GAAAT---GC--------------------CAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAC-TA-TTTT--CAATT-ATTTCCC---------TGA-----------C------G-----TT-----TGCCTTGCCTGTAACA---GTC-ACAGGACCGCC-AGA-TTTTG--CCAC-ATCTTTGACAGACTCA----GTGCCAGTCAGAAATTTCTTTCTCCA-CCT-ATGAACTG-CCCCA---------------GACC-CATTAATTTCT-CCCAATT--AAATAAA-AA--TCAGTATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-ACGGTA---ATAACT-----ACATTCTC-ACAGCTTTTCTCAGCCATTTTAAC-AACAGTGGTCAA--TGACTGGCTCTACT--GAAATGAC----TA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----TGTGTTTAT--ACTGT--TTGAAAA--G-TATTGAATAG----AGCTTTT---CAAGAG--TA-TCGTC--AT--CCACCAAATCGTGC-AAAACATT------ATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-TAAACTTTGNNNNNNNNNNNATTACATATCGAAC--AG-T-CCACGTA-CGTC----GTTCAAACTTT--GCTGATGACAAGCAGCTAGATCC-CCC--AGACT--TG---------GAAGGGAGTGGA-----TGGA---AAGT--TGGTGCA-CAGG----------------GGACAAAT-GGCGCTAT-TGTGC--C--ACA--GGAAC--TTATTGac
gi|2 : CTTTGN-NNNNNNNNN-NATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-CAAACT------------------------------------------------------T------T--GCTGATGACAAGCAGCTAGATCC-CCC--AGACT--TG---------GA---------A-----------------------------GGGA------GTGGA-TGGA-AAGTTGGTGC-A---------C--A-G--GGGAC--AAATGGC--GCTATTGTGCCA---C--AG---G--AACTT--A---TT--GACA-TAATATGT-GCTTCTGGTAATGAGCAGGG-AAAT-GGAACTGATGAAGATGGGGATGGAGTGGA-A-A-TGAACAAT-CTGATCGAT-T-AGATATTA--GATGATT-ATGATCAacataatatgtgcttctggtaatgagcagggaaatggaactgatgaagatggggatggagtggaaatgaacaatctgatcgattagatattagatgattatgatcatgatgatgactgatttgataatgctcactttattactgatttg
gi|20 : catagtttgcttccagttgtttttattggatcaaatttcgtaaccagcaacaatgtttgcaaattgtctttgattgaatttaggaaacctttttaaaaattgcttagcggatagtactcatactcgtttttggtcttctaccaatatatgcggtatgtatctagcagaaatattttgtactttcaaacatgcttcaaaatgaaatgccaacagctttggcaatatcacgaatcgtgtatctgccactattttcaattatttccctgacgtttgccttgcctgtaacagtcacaggaccgccagattttgccacatctttgacagactcagtgccagtcagaaatttctttctccacctatgaactgccccagacccattaatttctcccaattaaataaaaatcagtattaccgaatcactgagttttgtgctaacttttatataagctttacggtaataactacattctcacagcttttctcagccattttaacaacagtggtcaatgactggctctactgaaatgactataagtttaaaattatgtggagctgaaggcttgtgtttatactgtttgaaaagtattgaatagagcttttcaagagtatcgtcatccaccaaatcgtgcaaaacattatcgcgctgtggtacaatacacattacatatcgaacagtccacgtacgtcgtttaaa-CA-TGAA-AAG-AA-TATGTAATAAAGAA-C-CGT-CTTTG--TGC-T---GATGA-TTCT---TTTGG-CAA---CTAT-AGGCCTTC-TACTG-TATTTAGTTAGCCATATTAT-GTTTCCAATTTTCT---TTATTGCTTCGAAATAGTAA-ACTC-A-TGTTTTGTCCTCAGCAACGA-TGTTAGTAAATTATCTT-Ttgatgatgactgatttgataatgctcactttattactgatttg
gi|21 : AGAA-C-T-TTCTTTG--TGC-T---C-TGGCATAT---TCTTG-CTA---TTCCTTGACGTTC-C-CCT-TGTTCAGTCACCCACACCTT-G---TCAATTTTTCT-TTGA--GTTTCAAAGTAGT-GTACCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCGCAGTTT
gi|22 : tgcTACCCGTATTT-GGTC-ATCTGTCAATATACCGTATGTGAT-GTGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCAAGATAGCGATATGCCAA---C-AGCTT-CAACA-TTATC-ACGAACCATG---GATCTGCTAT-C
gi|23 : aGTAATTCC-GACCAGTAACGAAAA-CCTGTTACCCGGCTTC--GACAC-CGGAATTATGTACCGCAG-CTATAACA
gi|24 : AATT--CACTAAA-AA--TCTGCATTA-CCGAATGATTAAGTTTTGTACGAACGTTTA------TATAAGCTCTAA---TA---Aataaacggggaggagaatataacaataacaatccttattatagtggagtctatgaaggttcatttg
gi|24 : GACTGGCTTTATT--GAAATGACT----------------ATTA-GTGAAGCTG-AAGGCT----CATGTTTAT--ACT-G--TTG-GAA--gactggctttattgaaatgactattagtgaagctgaaggctcatgtttatactgttggaaa
gi|25 : aattcactaaaaatctgcattaccgaatgattaagttttgtacgaacgtttatataagctctaataaTTTCACTCTGATTTTATTTGGGTAGA-CCTCGGAGCC----ACTGA-TCG--ACT-GAGC-----CA---------------------------AGGAGATGTAACGATAACC-AGAGAAGAACTTCTTAAGTTT---------------AG-TCGTGTAAGGCTAGA-TCTGGA-G-AGTAa
gi|26 : AGATG-AAGGCTGAGACGTGTTTAT--A---CCGTTA-GAA--GCTATTCAACAG----------------------TA-TCGTC--AT--CCGCGAAATCGTGCCAAAGCATT------ATGGCGCTGTGA-TACAATACATTATTAC-ACATCGAACAG-CCCT
gi|27 : CTGCCAT-CA-CTTT--CAATT-ATTTCCC--------TGAA---TTTGGGACA------T-----TA-----T-CCTTGCCTGTTACA---GTA-ACAGGTCGGCC-AGA-TTGTG--CTGC-ATCTTTGATGGACTCT----GTGCCAGCCAGAAATT
gi|28 : AAAGTTATGC-AAATTTG-TTTGTTTACATACTTTAAT-----TAA--TGTTAATTTG-A-AAC-GTATCACT-ACTCAAAACTATATATGC-AAACTTG-TTTAT-TTGCATGAATTGATATTTAct
gi|29 : TG-AAGGCT----CATGTTTAT--A---CCATTG-GAAAGG-TATTGAGTAGA---G----CTAATCA--AGAGTA-TCATC--AT--CCACAAAATTGTGC-ACAATATT------ATTGTGGCGTGG-TACAATACA-CATTAC-c
gi|3 : TGATTT-----GGGTAGA-------AGTTGGAGA-TGA-T-G--A-T-GAGCTATT-TAAGGGCT--TAAAAT-T--GTAATGATAAGGAGATGTAAAGTC-----AGAG-AGAA-TGATTTAGTTTT--GGAAAAGG--AAAG-T-GTATAAGG-TAG--TATGGT-G-AGT-T-GGTGGGTGTGG-AAGACGATA---T--TT--AA--ATTTAAAAACATTGATT---AAG--TA----AGATGT----TGTG-TGGA--G-ATT-ATAAAA-AAGTAGACGA--AT-GC----------ATG-TGA---A-G---A-TGTAGTGTA-TGA------GTTTAAA-GAGTTTTTTGTATT---ATTAGAATATTGGT-ATA---GA-AGGTAAA----G---T-TTGAAT---TTA--GG----TGG--ATTTGT-ACG--G--TATA---------A-TAAATAGA-GG-TATGTAGT-AAGA----T-T-TTTTG--TG--T---TATGG-A------TTTGG--A------AT-AG---TTA-TATCG-TGTTTAATTAG--ATATTTT-GTT---AAAATTTTT-ATTATTAGTT---AAT-GT-A-A----A-TGTTT--------GTAAAGACTGTTTG-AAATTGTTTT---ATTG-AATATAGGAA---ATT-TT---AGAAAT---TG-TTAG--G-G-T-T------GTA-TAGTA-ATGTATTT-GGT--ATCTGT-AATAT------TGTGGT--TG-A--TGG-AGAAAT-TTTTTG--T--TT-T---A-AAT---AT-GTT---AAAT--GAAAT---GAA-----AGA-AG-GATTTGCAAATATT-AGATTATAG-A-ATAT------ATTGTG---TAT-----AT-TA-ATTT--TAACTGATTT
gi|3 : AGTCAGA---TTTTTT----A---T-ATGAA-TG-T---A---------------GGC---ATTAATTT-------AT----AGTAAA-AA--TATGTA------AGATAATT-AGTTTTGTG-TAA-TTTTA------TATAAGATTA-A---TA---TTATTT-----tgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaagtcagattttttatatgaatgtaggcattaatttatagtaaaaatatgtaagataattagttttgtgtaattttatataagattaatattattt
gi|30 : tgatttgggtagaagttggagatgatgatgagctatttaagggcttaaaattgtaatgataaggagatgtaaagtcagagagaatgatttagttttggaaaaggaaagtgtataaggtagtatggtgagttggtgggtgtggaagacgatatttaaatttaaaaacattgattaagtaagatgttgtgtggagattataaaaaagtagacgaatgcatgtgaagatgtagtgtatgagtttaaagagttttttgtattattagaatattggtatagaaggtaaagtttgaatttaggtggatttgtacggtataataaatagaggtatgtagtaagattttttgtgttatggatttggaatagttatatcgtgtttaattagatattttgttaaaatttttattattagttaatgtaaatgtttgtaaagactgtttgaaattgttttattgaatataggaaattttagaaattgttagggttgtatagtaatgtatttggtatctgtaatattgtggttgatggagaaattttttgttttaaatatgttaaatgaaatgaaagaaggatttgcaaatattagattatagaatatattgtgtatattaattttaactgattttgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaTAAGTTTT-GAAAAAAGGAAAAAGGTTGCATGGGGCGAAA-TTTGGAAG-AGTAT-GATGGGTATGGCAAGACAGTAACCT--TC--AATGACTTCAAAA-ATTGCTTCACACG-CTC----A
gi|31 : ACAAGACTC----AGATGCTCCATGTGGTGGGAGGCATT-ATCATGGAAGTTGACGAACAT-GCCTA------AATCCT-ATTTA-T---A-AATAACTTA-T-AT-A--AATCTT---GAGCTTTTT-T
gi|32 : GTCAT-TGCTTG-AATTTAG-AAAATATT-TTG-GGG-AAT---TGCATAG-TG-AAC-T------GTACTCTTGCCCGTTTTT-GATC-ACCTGTCAATATA-----TCCGGA-ATGCATCAGGCAGAtg
gi|33 : -CA-CA-TTAG-A-A-GG-TATGCAGTAAAGAA-C-C-C-CTTTG--TGC-T---TACGG-ATGT---TTTGG-CAA---TTAC-AGTTCTTC-TATCG-TGTTTATTTAGCCATATTTT-GCTTCCAA
gi|34 : -ATCATG-AAGTAGACGAACAT-GCCTA------AATCCGGACACA-G---G-CATCGTTTA-TGAC-A--TTTCTTA---AGCTTTTT-AAGT---ATAACATC-TCGGTAATACC-GACCTGTA
gi|35 : ATCTGCCAC-CG-CTCT--CGATT-ATTTCCC--------CCGA-----------C------T-----GT-----TGCCTTGCCTGTTACA---GTC-ACA-------------TTTTG--CTGA-ATCTTTGACGGTCTCT----GTGTCAGTCAAA
gi|36 : cT-GCTTCCAATTTTT---CTTATTGG------------A-ACCT-A-TGTTTCGTCACCAGCA-CAA-TGTTTGCAAATTGCCTT-TAATTG-AATTTAGG-AAACAAT-TTC-t
gi|37 : TT-CTTATTGGTTCGAAATCGTGA-ATCC-A-TATATCGTCACCAGTAACGA-TGTTTGCAAATTGTCTT-TGATTa
gi|38 : tga--ACTTCAAAA-ATCGCTTCACAAC-CTCTGTCAGATGT---ATATTGTGGA--GCATT-ATCATG-AAGTAGACGAACAT-G
gi|39 : CGTT------ATCGCACTGTGG-TACAATACC-CATTAC-CCATCAGACAA-CCCTCGTA----
gi|4 : acGATTT-----AGGTTGA-CTTCCGAGGCACCGACTGA-T-G--GCT-GAGC-----CAAAGGCT--T---GT-C--G----G-----GACTTGTAATGACGACCAAA------------TA----TTTGGAAAAA------AG-TTGCATGAGGCTAGA-CCTGGA-G-AGTAT-GGTGGGTGTGGCAAGACGGTA--------------ACCTC-------CG----ACGA--CT--------TG------GTAATGGA--GCATT-ATCATG-AAGTAGACGAGTAT-GCCTA------AATCCTGATACACG---G-CGTCGTTT---GAT-A--TTTCTTGA-GA---TTTT-TAGT---ATAA-AGTCTCGGTGATACC-GACCTGCAAA----A-CTT-TTGACC---TTC--GGCAC-CAGAA-TTTATA-TG--G-CTATACTAT--------------------ATGCAATGAAGAA-CAT-T-CTTTG--TGCATGCGTATGG-TTCT---TTTGG-CAAGTTCTAG-AAGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GTTTCCAATTTTT---CATACCGGTTCGAAATAGTGA-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG--ATTTTGAGAAACATT-TT--GAGCAAT---TGCTTAG-CA-A-T-TTGTATAATACTCATACACGGTTTT-G
gi|4 : ATGTCAA---A-GGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAT-CA-CTTT--CAATT-ATTTCCC---------TGA---C------CT------T-----TTAAACATGGCTTGCCTGA-ACAA--GTC-ACAGATCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACCCT----ATGCCAGTCAGAAAATTCTTTCTCCACC-T-ACGAGTTA-TCTCA---------------tgttgttgtttcgtttgcttgtttgtttgtttcaaatgtcaaaggctttggcaatatcacgaatcgtgtatctgccatcactttcaattatttccctgaccttttaaacatggcttgcctgaacaagtcacagatcggccagattttgctgcatctttgacggaccctatgccagtcagaaaattctttctccacctacgagttatctca
gi|41 : gatttaggttgacttccgaggcaccgactgatggctgagccaaaggcttgtcgggacttgtaatgacgaccaaatatttggaaaaaagttgcatgaggctagacctggagagtatggtgggtgtggcaagacggtaacctccgacgacttggtaatggagcattatcatgaagtagacgagtatgcctaaatcctgatacacggcgtcgtttgatatttcttgagatttttagtataaagtctcggtgataccgacctgcaaaacttttgaccttcggcaccagaatttatatggctatactatatgcaatgaagaacattctttgtgcatgcgtatggttcttttggcaagttctagaagccttctaccgtgtttagttagccatattttgtttccaatttttcataccggttcgaaatagtgaacccatgtttcgtcaccagtaacaatgtttgcaaattgtctttgattgattttgagaaacattttgagcaattgcttagcaatttgtataatactcatacacggttttgtgttgttgtttcgtttgcttgtttgtttgtttcaa-TACAACACA-CATTAC-ATATCGAACAG-CCCTCGTA----
gi|42 : GTAGTTTAATGCT-AG-TATCTCAAAGAGCTTTTT-TGGC---ATAACATttcttccgtgttta
gi|43 : t-T-ATGAATTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAa
gi|5 : -ACCATG-AAGTAGATGAACAT-GCCAA------AATACTGACACA-G---GGTGTTGTTTA-TGGC-AAGTAGTTCTT-GAGCGTTTT-TAAT---ATAACAT-ATCAGTAATACC-GACATGTAAC----A-CTG-TTGCCC---TTC--GGCAC-CGGAA-TTAGTA-CG--G-CTTTACCAT-CA-CA-TGAG--GA-GAATATGCAATAAAGAA-C-----CTTTG--TGC-C---TATGG-TTCT---TTTGG-CAA---CTAC-AGACCTTC-TGCCG-TGTTTAGTTAGCCATATTTT-ATTTCCAA--TTTTT-ATTACTGGTTCGTAATAGTGA-ACGC-A-TGTTTTGTCACCAGTAATAA-TGTTTGCAAAC--CTTT-TGGTTG-AATTT-GGGAAACATG-TT--GAGCAAT---TGTTTGG-T----T-T------GTACTCGTACCCGTTTTT-AGTC-ATC---------------TGTGAT-------------GAAGT----TCG--TACTT-TCA-----------------AAGAT------T---GCTC-CCGCGATAG--------------C-AGTTT-TAGCA-GTATC-A---------------CTACCAT-AA-CGTT--CAATT-ATTTCTC--------TGGC---T------TG------TAGACATT-----TGCCATGCCCGTAACAGTCGTC-ACAGTTCGACT-AGA-TTTTG--CTGC-ATCTTTCACAGACTTTACAGGTGTCAGTCAAAATTTTCTCTCTCCATC-T-ACGAACTG-TCTCA---------------
gi|6 : C-AAAGCATT------ATCGCGCTGTGGGTACAATACA-CATTACGATATCCAACAGGCCCTCGCAAGCACGGTCGTT-TAAACT--------------------------ATGAAG-T-T---GTAACATTTTGGGCTTAA----TCCGCTGATGACGAACAGCTAGATTCTGCCGCAGACT--TA---------GA---------AGAGAATGAATGTAAGAGATGGTACATGAGGGGATTGAATATGAA-TGGACAAGT-GGTGCTAT-TGTGCCAC--A-G--GAAAC--TTATT----G--ACTAGATCAAGCT--GTTTCGTTATCTTTTAACCTT--TACAGTACTGTGGTGCTTCTGGTGATGAGCAGGG-AAATGGGAACTAATGAAGAAGGGGATGAAATGGATA-ATTGAACAGTCCTGATCAA----A-----TC--AATGA---ATCACCGCATC--AGTCGAAGCGCGTTGTAATGCTCAGAATTATGC-AAATTTGTTT-ATTTACAAAC----ATTCATATAA--T-TTGATTTGGATAACGGTATTACTAACTCAAAATTAT----GCAAAAATTG-TTTATGTTACAAGAATTGATATT
gi|7 : aTT-ATA-TAAGATTAATATTATTTAG-------------------GTTTAT--A---A------GAA----TTTTAAA------------------A--AG--TGGTAAAG--ATGGTTATGAAATGATGA-AAAA-ATTGAAAAGAT-ATGGTGTGG-T-TAATA----ATTA--ATAT-AAAGAG--------A----TG-TGATT-TAAA-T--------------------------AT--AG-TGT---GTA--ATTT--GG-TTAA----T--GATGATGA-GAG-AGCTAGATTA-GAT--AGAGAGATA---------GA---------A-----TGGA---AAG---GGGTAAA-GAGGG--TTGAATA--GA-TG---AAGT-GGTG-TATATGTG---C--A-GATGGAA---TTATTAG--A--ATAAGAT-A---T--GGTTAGTTA--TTTAA--ATT--TAAA-T----TGTTGATT-TGGTGATGAGGAAGG-GAAT-GGA--TGATGAAGAAGGGGATG-AGTGGA-ATA-TGAA-AGT--TGAT--ATGG-A-ATATTTTGGATAA-T-ATG-TCA---T--A-TTGAAGAGCGT--T-ATGAT-AAATTTATG--AAATTTG-TT-A-TTAAACAT----AT-----TTAATT-TTGCTTT-GA-AAC-GTATTATT-A---AAAATTAT----G---AAATTGTTTTAT-TT--AAGAATTGATATTT
gi|8 : taattAAATGCATGCTTAATCTCAGTT--ACTC--GTTT-----GAGTAGC-CGTCTGAGTCACTGACTGA-T-GC-GCTTGAGC-----CAAGGGCT--T---CTTC--GT---GAC-TTGTAACGTAA----GACCA-GATCAGA-CTTCTTAAGTTTT---GAAAAAAGAAAAG-TTGT-TAAGGCTAGA-ACTGGA-G-AGTATTGGTGGGTATGGCAAGGCGGTGCC-----------------------TC-CTTCACAAG-TTC----AGATGT---ATATGAT-GA--ACATTAATCATA-AAGTAGACAAACATGGCCTA------AATGCTGACACA-GGGCA-AATCGTTTA-TGAT-A--TTTCT--A-GA-----------T---AT-ACA-TATCGATAATACC-AACCGGTAAT----ACCTT-TTCCCC---TTT--GGCAC-CGG--ACTTGTTACG--GCCTATA-CATCCA-TA-TTAG-AAG-GA-TATGCAATAAAGAACC-T-T-CTTTG--TGC-T---TATGG-TTCTGGCGTTGG-CAA---CTAC-A-GCATTC-TACCG-TA-TTATCTAACCATA-TTT-GCCTCCA---TTTTT-CTT
gi|9 : aAGTAAAGAA-C-T-TTCTTTAGTTGT-T---TACTG-ATCT---TTTGGGCAAG--CTAC-AGGTCTTCCTATCGGTGTTTAATTAGCCATATTTTTGCTTCCAATTTTTTC-TTAATTGGTTCAAAATAGT-A-ACCC-A-TGTTTCGTCAACAGCAACAA-TGTTTGCCACTTGTCTT-TAATTG-AATATAGG-AAACATT-TTC-AAGAAAT---TGCTTAGTCGAA-T-T------GT-CTCGTACCCGTATTT-GGTC-A-------------------TGGTAATGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AATAAAAT-GCTTCAAAAT--GAAAT---GCAC-CCAAGA-AGCGATTTGCCA------AGCTT-TTACATCTATCAACGAATCATA---GATCTGCTAT-CA--TTT--CAATT-ATTTCCC--------C-GA-----------C------T-----TT-----TGCATTGCCTGCTACA---GTC-ACCGGTCCATCAAGATTTTTC--CTAA-ATGTTCGACGGACTCC----GTGCCAGTTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|40 ): AGATACTTTATCATACCAATGCTTTGACTAAACTTGCTGAAACTTTGTA
Unaligned ( gi|44 ): GTAACACATAATCTTTTAAAGATTTGATTGTAA
Alignments
lowQualScore : 111111 111 11 11111 1111 5555555555555555555555 11 1111 22222222222222 11111111 1111 111111 111111 1111 1 1111 111 11 11111 1111 111 222222 222222222222222 111111 11 1111111111 1111 666666666666666666666666666666666666 11111 111 1111 111 222222222222222 111111 3333333333 11111 1 1 222 1111 222222 1111 8888888888888888888888888888888888888888888888888 111111 1111 777777777777777777 2222222222 999999999999999999999999999999999999999999999999999999999 11 111 111 2222222 22222222222 11 3333333 222222 222222 11 1 1 1 11111 11 3333333 111 222 22222222 11 11 1 111 333333333333333333 1 1 1 2222222 1 1
lowQualScore : 555555 111 0 5 2 5 5 11 5 22222 0000 1 9999999999999999999999 1 0 1 5 55 0 3 8888 999999 4 0 0 4 55 4 5 77777777777777 2 4 1 1 1 22222222 1 1111 5 66 3 3 3 111111 0 4 111111 3 1 2222 3 6666 7 777 0 0 4 5 0000 5 5 888 888 5 888 77 77 5 7 9999 5 2 77777 5 4 99999 55 4 777 1 55 777 4 4444 4 1 4 0 4 3 0 0 7777 2 2 222 3 3 3 1 2 3 4 2 999 7 111111 777 000000000000000 0 3 4 1 000000 66 3 22 66 8 999 777 4 66 777 6666666666 5 3 77777 4 3 44 4 2 3333 3 77 55 3 999999999999999999999999999999999999 11111 2 222 4 2 5 5 66 5 0000 0 555 1 999 4 4 777777777777777 6 5 66 5 77 5 0 6 666666 1111111111 1 66666 8 0 3 5 0 111 2 9999 444444 5 0000 66 8888888888888888888888888888888888888888888888888 5 3 1 1 5 0 222222 0 3 3 3 2 66 0000 6 6 444444444444444444 99 55 99 6 6 0000000000 333333333333333333333333333333333333333333333333333333333 5 3 11 888 111 2 1111111 6 1 6 00000000000 11 2222222 2 999999 3 2 3 9 444444 33 0 55 0 3 2 0 0 3 1 7 22222 2 22 22 0000000 888 333 3 88888888 0 88 7 6 1 22 0 111 1 888888888888888888 55 0 0 0 2 3333333 0 0 7
lowQualScore : ...... ... . . . . . .. . ..... .... . ...................... . . . . .. . . .... ...... . . . . .. . . .............. . . . . . ........ . .... . .. . . . ...... . . ...... . . .... . .... . ... . . . . .... . . ... ... . ... .. .. . . .... . . ..... . . ..... .. . ... . .. ... . .... . . . . . . . . .... . . ... . . . . . . . . ... . ...... ... ............... . . . . ...... .. . .. .. . ... ... . .. ... .......... . . ..... . . .. . . .... . .. .. . .................................... ..... . ... . . . . .. . .... . ... . ... . . ............... . . .. . .. . . . ...... .......... . ..... . . . . . ... . .... ...... . .... .. ................................................. . . . . . . ...... . . . . . .. .... . . .................. .. .. .. . . .......... ......................................................... . . .. ... ... . ....... . . . ........... .. ....... . ...... . . . . ...... .. . .. . . . . . . . . ..... . .. .. ....... ... ... . ........ . .. . . . .. . ... . .................. .. . . . . ....... . . .
lowQualScore : 888888 222 2 1 8 0 0 99 0 55555 6666 4 9999999999999999999999 4 4 4 0 66 1 4 3333 777777 4 9 8 4 44 4 0 11111111111111 0 4 7 1 1 44444444 1 2222 3 11 6 6 6 555555 5 0 111111 6 0 7777 9 2222 3 000 7 1 4 7 6666 0 0 888 333 7 666 11 99 7 9 3333 0 8 55555 0 0 88888 55 0 000 2 44 888 4 1111 4 9 4 9 4 6 4 9 2222 2 3 888 1 1 1 4 9 3 9 6 111 3 111111 000 888888888888888 5 6 0 0 777777 33 9 11 11 9 888 888 4 11 888 7777777777 7 6 66666 0 9 11 0 3 4444 3 88 00 6 000000000000000000000000000000000000 11111 2 222 4 5 0 0 99 0 6666 2 666 4 666 4 4 888888888888888 7 7 99 7 99 7 7 6 444444 3333333333 0 77777 0 8 3 6 6 222 5 3333 333333 0 6666 99 6666666666666666666666666666666666666666666666666 7 0 7 4 0 7 888888 1 6 6 6 3 33 6666 7 7 000000000000000000 22 00 22 7 7 5555555555 888888888888888888888888888888888888888888888888888888888 2 2 55 333 777 5 7777777 7 0 7 22222222222 00 2222222 5 222222 2 5 2 8 000000 88 0 88 2 2 5 0 0 2 0 0 00000 5 55 88 0000000 000 222 2 33333333 7 33 3 7 0 55 0 222 2 222222222222222222 00 0 0 0 5 8888888 0 0 0
consensus : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CA----AGGGCT--TG---T-C--G----GACA-GGAGATGTAACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTAT--A--NCGTTG-GAA--G-TNTTGAATAG----G---T-T--TCA--AGA-TAT-CGTCATCCACGAAATCGCGC-AAAGCGTT------ATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACTAT--AG-T-TGTA-CATTT--GGCTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATATGAA---TGG---ACAAG-------T-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
Reference ( family-1073 ) : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CA----AGGGCT--TG---T-C--G----GACA-GGAGATGTAACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTAT--A--NC-TTG-GAA--G-TNTTGAATAG----G---T-T--TCA--AG--TAT-CGTCATCCACGAAATCGCGC-AAAGCGTT------ATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACTAT--AG-T-TGTA-CGTTT--GGCTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TG---------G--AA-----TGGA---AAG---TGG-TA-------CA------GAGGGGATTGAATATGAA---TGG---ACAAG-------T-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|1 : AAGTGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGATCTTCTGAGCC-CTGACTGA-T-G--ACT-GAGCAAATTTA----AGGGTTAATG---T-CATG----AACA-GGAGATAATACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGGAAAAGAAAAAG-TCGTAGAAGGCTAGACTCTTGC-GCAGTAT-GGTGGGTGTAGCAAGATGATACCCT--TC--AA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTTACATA-G---A-TGTAGTTTA-TGCT-A--T-TCTCAA-GAGCTTTTT-TAGT---GTAGCATTATTGGTAATACC-GACC-GTAAC----A-CTT-TTGTCC---TAT--AGCATGCGGAAATTTGTAACG--G-CCATACCAT-CATCATTAAG-AGAGGG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TATGG-ATCT---TTTGG-CAA----TAC-AGGTCTTC-TA-TG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTTACTTATTGGTTCAAAATAGT-A-ACCC-A-TG-TTCGTCA-CAGCAACAA-TGTTCGCAAATTGTCTT-TAATTG-AATATAGGAAAACATC-TTC-GA--AAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTATTT-GGTCAATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTTG--TACTT-TCATA-AAT---AC-GCTTCAAAAT--GAAAT---GCACACCAAGA-AGCGATTTACCAA---C-AGCTT-TAGCA-TTATC-ACGAATCATGA--GATCTGCTATACA-ATTT--CAATT-ATTTTCC--------CCGA---T------CC------T-----TT-----TGCTTTGCCTGCTACA---GTC-A-AGGTCCATC-AAA-TTTTATCCGGC-ATCTTCGACGGACTCC----GTGCCAGTCAGAAATTTCTTTCT-CA-C-T-ATGAACTG-TTCCA---------------GA-C-CATTATAATCT-CCCAA-T--AAGTGAATCA--TCTGCATTA-CCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-AT--TATCTATAGCT-----ACATTCTC-ACAG-GGTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCAACTGGCTCTATCGCGAAATGACTTAATATTAAGTTTAAAATTATGTGGAACTGTAAGGCT----CATGTTTA---A--TT-T--------G-TTTTGGA------------------A--AG----------ATCCATGAAATGGCGC-AAAGCATT------ATCACGCTGTGG-TACAATACA-CATTAC-ATATCCAATA-----TCGCA----CG-TTGTTATAAACTATC-AGTT-TGTA-CATTT--GGCGTAAT--GCTGATGACGAG-AG-CTAGATCT-G----CC--AGACT--TA---------G---A-----TG-------G---TGG-TA-------CA------GAGGGGATTGAAT-TGAAT--TGG---ACAAG-------T-GGTGCTAT-TGTGC--CCAA-G--GGAACAGTTATTTGACG--ATTAGATCA---CTAGGTTCGTTATCTTTTG--CCTTATACA-TACTGTGTTGCTTCTGGTGATGATCAGGGAAAAT-GGAACTAATGAGAGTGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-GTA-ATATTT--GATGA-TCATGATCACATTCAG-TTGAAGCGCGT--TAATGCTCAAATTTATGCTAAATTTG-TT-GTTTACATAC----AT-----TCA----TTAATTTGGA-AAC-ATATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|10 : gACTTCT-CGCAATT--AAGTAAA-CA---CTGCATTT-CTGAATCACTGAGCTTTATGCTAACTT--A------TATAAGCTTT-AA--TT---AGATCT-----ACATTCTC-ACAGCATTTCCTAGCCATTTTCACAA-CAGTGGTCAA-C-GAATGGCTCTAT--CGAAATGACTT-AT-----GTTTAAAACTATGTGGAGCTG-AAGGCT----CGTATTTATTTA--TT-TT----------TTTGAAAAGTAACGCT-T-T--TCA--AGATTAT-CATCATCCATGAAATTGCGC-AAAGCGTT------TTCGCGCTGTGG-TACAATACA-CATGAC-ATATTCAACAG-CCCTCGTA----CG-TCGTT-AAAA-----------------GTTT--GGCTTAAT--GCTGATGACAAGCAG-CTAGATCC-C----TC--AGACT--TGGAAGGGAATG--AA-----TGGA---AAGT--TGG-TA-------CA------GA-GGGATTGAATATGAA---TGG---ACAAA-------T-GAAGTTAT-TGTG
gi|11 : CATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGG-----TAA---ACGGACAGAAT-GTCACA-GGAC-----AA----AAAG---------T-C--------ACA-GGACATA-AAAG-ACGACCA-GAGAAGAACTGCTTAAGTTTTTGG---------------C---CAAGGCTAGA-TCTGGC-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TCTCCA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ACGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCCA------AATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-GAGCTTTTT-TAGT---ATAGCA-TATTTGTAATACCAGGCCGGTAAC----A-CTT-TTGCCC---TTTTAGGCAT-CGT-AATTTGT-ACA--G-CTATACCAT-CA-CA-TTAG-A-A-GG-TATGCAGTAAAGAA-C-T-T-CATTG--TGC-T---TACGG-AT
gi|12 : TTTTT-CATACTGGTTCAAAATAGT-G-ACCC-AATGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTGGTGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTTTGGTC-ATCTGTCTATATA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TATCTTT--CAATT-ACTT-CC--------CAGAGTTT------TCAAGACAT-----TT-----TGCCTTGCCTGTTACA---ATCAATAGGTCGGCC-AGA-TTTTG--CAGTAATCTTTGACAGACTCT----GTG------AGA---TTCTTTCTCAA-C-TGACGAACTG-TCCCA---------------
gi|13 : aAAATGCATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGA-CTTCTGAGCCACAGACTAA-T-G--ACT-AAAC-----CA----AGGGCT--TG---T-C----------A-GGAGATGTAACG-ACGACCA-GAGAAAAACTGCTTAAGTTTT-GGAAAAAGGAAAAAG-TCGTATAAGGCTAGA-ACTGGC-G-AGTAT-GGTGGATGTGGCAAGACGGTACCCTTCTC--CG--ACTTCAAAA-A-------GCA-------------------ATTTGATCGA--GCATT-ATCATA-GAGTAGACGAACAT-ACCTAAAATTTAATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-CAGCTTTTTATAGTATAATAACA-TATCGGTAATACC-GACCGGTAGC----A-CTT-TTGCCC---T
gi|14 : aAAATGCATGCTTAACTTACGTTTCACTCTGATTT-----GGGTAGA-CCTCTGAGCCACTGACTGA-T-G--ACT-GAGC-----CA----AGGGCT--TG---T-----------CA-GGAAATGTAAAG-ACGACC-AGAGAATATCTGATTAAG--TTTAAGAAAAAGAAAAAT-TCGTATAAGGCTAGC-TCTGGC-G-AGTAC-GGTGAGTGCGGCAAGACGGTACCCTTCTC--AG--ACTTTTAAA-ATTGCTTCACAAG---C----A--------ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTGATATA-G---A-TGCAGTTTA-TGCTAA--TATCTCAA-AAGCTTTTT-TAGT---ATAGCAT
gi|15 : TGGTTCAAAATAGT-G-ACCCCA-TGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTG-TGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTT-GGTC-ATCTGTCTATACA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TA-CTTT--CAATT-ACTTCCCAGAGTTTTCAGA-----------C------A-----TT-----TGCCTTGCCTGTTACA---ATC-ATA
gi|16 : cAAACTGC-G-ATCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCG-CAGTTTGCAAA---TT-TTC-----AATATATATTTGG-CC-A-TCT------TTACGCGGATTCTTTTCT-GATC-ATTTGTCAGCAAA-----TGTGGT-ATCCATCTTGCATTTATC-TTTCGGAGACCT-----A-AAT---GCTTTTTCAAAATTGAAAATATGGTTC-CCGA-----TGATATATCAA---CTAAATT-T-GCA-ATACC-TC---TTGTGGTCAATCACCCAT-CGTCATTAACAATT-TTTT
gi|17 : cCCAA-CCATTTCTACAA-CAGTGGACAA-C-GACTGTCTCTATT-TGAA-TGACT--GTA-TAACTTTAAAACTATGTAGAGCTG-AAGGTT----CGTATTTAT--A--ACGTTG-GAAAGG-TATTGAATAG----GGA-TAT--TCA--AGAGTACATGT-ATCCACGAAATCGTGC-AAAGCGTT------ATCGAGCCATGG-TATAATATA-CCTTAC-ATATCAAAtttaaatttgttca
gi|18 : CCA-CCT-ATGAACTGGTCCCA---------------GGCCTCATTAACTTCT-CCCAATT--AAAGAAA-AAAATCTGCATTATCCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A--------ATATCT-----ACATTCTC-ACAGCGTTTTCTA-ACATTTTCAACAACAGTGGTCAACCCGA-TGGCTCTA-T-CGAAATGATT
gi|19 : CATTCGAAAACTTCATTCTTTA-CCT-ACGAACTG-TCTCATAACATACCATATCAGACC-CATAAACTTCAACTTAATTTTCAGTAAA-AA--TCTGCATTA-CCGAATGATTGAGTTTTGTGCTAACTTTTATTCATGTATCA-CTTC-----TA---ATTCCTTATAAATATTCTCGAC-TCGTTTTCTA-aa
gi|2 : CATAGTTT-GCTTCCAGTTGTTTT---TATTGGATCAAA-----------------TTTCGTAACCAGCAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAACCTTT-TTA-AA--AAT---TGCTTAG-CGGA-T-A------GTACTCATACTCGTTTTT-GGTC-TTCTACCAATATA-----TGCGGT-ATGTATCTAGCAGAAATATTTT-G--TACTT-TCA-A-A-C---AT-GCTTCAAAAT--GAAAT---GC--------------------CAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAC-TA-TTTT--CAATT-ATTTCCC---------TGA-----------C------G-----TT-----TGCCTTGCCTGTAACA---GTC-ACAGGACCGCC-AGA-TTTTG--CCAC-ATCTTTGACAGACTCA----GTGCCAGTCAGAAATTTCTTTCTCCA-CCT-ATGAACTG-CCCCA---------------GACC-CATTAATTTCT-CCCAATT--AAATAAA-AA--TCAGTATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-ACGGTA---ATAACT-----ACATTCTC-ACAGCTTTTCTCAGCCATTTTAAC-AACAGTGGTCAA--TGACTGGCTCTACT--GAAATGAC----TA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----TGTGTTTAT--ACTGT-TTGAAAA--G-TATTGAATAG----AGCTT-T--TCAAGAG--TAT-CGTCATCCACCAAATCGTGC-AAAACATT------ATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-TAAACT-------T-TG-N-NNNNN--NNNNNATT--AC--ATATCGAACAGTCCACGTAC-GTCGTTC--AAACT--TT---------GCTGA-----TGAC---AAG---CAGCTAGATCCCCCAGACTTGGAAGGGAGTGGATG-GAAAGTTGGTGCACAGGGGACAAAT-GGCGCTAT-TGTGC--C--ACA--GGAAC--TTATTGac
gi|2 : CTTTGN-NNNNNNNNN-NATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-CAAACT-------------------------T--T--GCTGATGACAAGCAG-CTAGATCC-C----CC--AGACT--TG---------G--AA------------------------------------------GGGA------GTGGA---TGG---A-AAG-------TTGGTGC-A---------C--A-G--GGGAC--AAATGGC--GCTATTGTGCCA---C--AG---G--AACTT--A---TT--GACA-TAATATGT-GCTTCTGGTAATGAGCAGGG-AAAT-GGAACTGATGAAGATGGGGATGGAGTGGA-A-A-TGAACAAT-CTGATCGAT-T-AGATATTA--GATGATT-ATGATCAacataatatgtgcttctggtaatgagcagggaaatggaactgatgaagatggggatggagtggaaatgaacaatctgatcgattagatattagatgattatgatcatgatgatgactgatttgataatgctcactttattactgatttg
gi|20 : catagtttgcttccagttgtttttattggatcaaatttcgtaaccagcaacaatgtttgcaaattgtctttgattgaatttaggaaacctttttaaaaattgcttagcggatagtactcatactcgtttttggtcttctaccaatatatgcggtatgtatctagcagaaatattttgtactttcaaacatgcttcaaaatgaaatgccaacagctttggcaatatcacgaatcgtgtatctgccactattttcaattatttccctgacgtttgccttgcctgtaacagtcacaggaccgccagattttgccacatctttgacagactcagtgccagtcagaaatttctttctccacctatgaactgccccagacccattaatttctcccaattaaataaaaatcagtattaccgaatcactgagttttgtgctaacttttatataagctttacggtaataactacattctcacagcttttctcagccattttaacaacagtggtcaatgactggctctactgaaatgactataagtttaaaattatgtggagctgaaggcttgtgtttatactgtttgaaaagtattgaatagagcttttcaagagtatcgtcatccaccaaatcgtgcaaaacattatcgcgctgtggtacaatacacattacatatcgaacagtccacgtacgtcgtttaaa-CA-TGAA-AAG-AA-TATGTAATAAAGAA-C-CGT-CTTTG--TGC-T---GATGA-TTCT---TTTGG-CAA---CTAT-AGGCCTTC-TACTG-TATTTAGTTAGCCATATTAT-GTTTCCAATTTTCT---TTATTGCTTCGAAATAGTAA-ACTC-A-TGTTTTGTCCTCAGCAACGA-TGTTAGTAAATTATCTT-Ttgatgatgactgatttgataatgctcactttattactgatttg
gi|21 : AGAA-C-T-TTCTTTG--TGC-T---C-TGGCATAT---TCTTG-CTA---TTCCTTGACGTTC-C-CCT-TGTTCAGTCACCCACACCTT-G---TCAATTTTTCT-TTGA--GTTTCAAAGTAGT-GTACCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCGCAGTTT
gi|22 : tgcTACCCGTATTT-GGTC-ATCTGTCAATATACCGTATGTGAT-GTGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCAAGATAGCGATATGCCAA---C-AGCTT-CAACA-TTATC-ACGAACCATG---GATCTGCTAT-C
gi|23 : aGTAATTCC-GACCAGTAACGAAAA-CCTGTTACCCGGCTTC--GACAC-CGGAATTATGTACCGCAG-CTATAACA
gi|24 : AATT--CACTAAA-AA--TCTGCATTA-CCGAATGATTAAGTTTTGTACGAACGTTTA------TATAAGCTCTAA---TA---Aataaacggggaggagaatataacaataacaatccttattatagtggagtctatgaaggttcatttg
gi|24 : GACTGGCTTTATT--GAAATGACT----------------ATTA-GTGAAGCTG-AAGGCT----CATGTTTAT--A--CTGTTG-GAA--gactggctttattgaaatgactattagtgaagctgaaggctcatgtttatactgttggaaa
gi|25 : aattcactaaaaatctgcattaccgaatgattaagttttgtacgaacgtttatataagctctaataaTTTCACTCTGATTTTATTTGGGTAGA-CCTCGGAGCC----ACTGA-TCG--ACT-GAGC-----CA------------------------------A-GGAGATGTAACG-ATAACC-AGAGAAGAACTTCTTAAGTTT---------------AG-TCGTGTAAGGCTAGA-TCTGGA-G-AGTAa
gi|26 : AGATG-AAGGCTGAGACGTGTTTAT--A--CCGTTA-GAA--GCTATTCAACAG----------------------TAT-CGTCATCCGCGAAATCGTGCCAAAGCATT------ATGGCGCTGTGA-TACAATACATTATTAC-ACATCGAACAG-CCCT
gi|27 : CTGCCAT-CA-CTTT--CAATT-ATTTCCC--------TGAA---TTTGGGACA------T-----TA-----T-CCTTGCCTGTTACA---GTA-ACAGGTCGGCC-AGA-TTGTG--CTGC-ATCTTTGATGGACTCT----GTGCCAGCCAGAAATT
gi|28 : AAAGTTATGC-AAATTTG-TTTGTTTACATACTTTAAT-----TAA--TGTTAATTTG-A-AAC-GTATCACT-ACTCAAAACTATATATGC-AAACTTG-TTTAT-TTGCATGAATTGATATTTAct
gi|29 : TG-AAGGCT----CATGTTTAT--A--CCATTG-GAAAGG-TATTGAGTAGA---G---C-TAATCA--AGAGTAT-CATCATCCACAAAATTGTGC-ACAATATT------ATTGTGGCGTGG-TACAATACA-CATTAC-c
gi|3 : TGATTT-----GGGTAGA-------AGTTGGAGA-TGA-T-G--A-T-GAGC-----TATTTAAGGGCT--TAAAAT-T--GTAATGATAAGGAGATGTAAAG-TC-----AGAGA-GAA-TGATTTAGTTTT--GGAAAAGGAAA--G-T-GTATAAGG-TAG--TATGGT-G-AGT-T-GGTGGGTGTGG-AAGACGATA---T--TT--AA--ATTTAAAAACATTGATT---AAG--TA----AGATGT----TGTG-TGGA--G-ATT-ATAAAA-AAGTAGACGAA--T-GC----------ATG-TGA---A-G---A-TGTAGTGTA-TGA------GTTTAAA-GAGTTTTTTGTATT---ATTAGAATATTGGTA-TA---GAA-GGTAAA----G---T-TTGAAT---TTA--GGT----GGA--TTTGTA-CG--G--TATA---------A-TAAATAGA-GG-TATGTAGT-AAGA----T-T-TTTTG--TG--T---TATGG-A------TTTGG--A------AT-AG---TTA-TATCG-TGTTTAATTAG--ATATTTT-GTT---AAAATTTTT-ATTATTAGTT---AAT-GT-A-A----A-TGTTT--------GTAAAGACTGTTTG-AAATTGTTTT---ATTG-AATATAGGAA---ATT-TT---AGAAAT---TG-TTAG--G-G-T-T------GTA-TAGTA-ATGTATTT-GGT--ATCTGT-AATAT------TGTGGT--TG-A--TGG-AGAAAT-TTTTTG--T--TT-T---A-AAT---AT-GTT---AAAT--GAAAT---GAA-----AGA-AG-GATTTGCAAATATT-AGATTATAG-A-ATAT------ATTGTG---TAT-----AT-TA-ATTT--TAACTGATTT
gi|3 : AGTCAGA---TTTTTT----A---T-ATGAA-TG-T---A---------------GGC---ATTAATTT-------AT----AGTAAA-AA--TATGTA------AGATAATT-AGTTTTGTG-TAA-TTTTA------TATAAGATTA-A---TA---TTATTT-----tgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaagtcagattttttatatgaatgtaggcattaatttatagtaaaaatatgtaagataattagttttgtgtaattttatataagattaatattattt
gi|30 : tgatttgggtagaagttggagatgatgatgagctatttaagggcttaaaattgtaatgataaggagatgtaaagtcagagagaatgatttagttttggaaaaggaaagtgtataaggtagtatggtgagttggtgggtgtggaagacgatatttaaatttaaaaacattgattaagtaagatgttgtgtggagattataaaaaagtagacgaatgcatgtgaagatgtagtgtatgagtttaaagagttttttgtattattagaatattggtatagaaggtaaagtttgaatttaggtggatttgtacggtataataaatagaggtatgtagtaagattttttgtgttatggatttggaatagttatatcgtgtttaattagatattttgttaaaatttttattattagttaatgtaaatgtttgtaaagactgtttgaaattgttttattgaatataggaaattttagaaattgttagggttgtatagtaatgtatttggtatctgtaatattgtggttgatggagaaattttttgttttaaatatgttaaatgaaatgaaagaaggatttgcaaatattagattatagaatatattgtgtatattaattttaactgattttgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaTAAGTTTT-GAAAAAAGGAAAAAGGTTGCATGGGGCGAAA-TTTGGAAG-AGTAT-GATGGGTATGGCAAGACAGTAACCT--TC--AATGACTTCAAAA-ATTGCTTCACACG-CTC----A
gi|31 : ACAAGACTC----AGATGCTCCATGTGGTGGGAGGCATT-ATCATGGAAGTTGACGAACAT-GCCTA------AATCCT-ATTTA-T---A-AATAACTTA-T-AT-A--AATCTT---GAGCTTTTT-T
gi|32 : GTCAT-TGCTTG-AATTTAG-AAAATATT-TTG-GGG-AAT---TGCATAG-TG-AAC-T------GTACTCTTGCCCGTTTTT-GATC-ACCTGTCAATATA-----TCCGGA-ATGCATCAGGCAGAtg
gi|33 : -CA-CA-TTAG-A-A-GG-TATGCAGTAAAGAA-C-C-C-CTTTG--TGC-T---TACGG-ATGT---TTTGG-CAA---TTAC-AGTTCTTC-TATCG-TGTTTATTTAGCCATATTTT-GCTTCCAA
gi|34 : -ATCATG-AAGTAGACGAACAT-GCCTA------AATCCGGACACA-G---G-CATCGTTTA-TGAC-A--TTTCTTA---AGCTTTTT-AAGT---ATAACATC-TCGGTAATACC-GACCTGTA
gi|35 : ATCTGCCAC-CG-CTCT--CGATT-ATTTCCC--------CCGA-----------C------T-----GT-----TGCCTTGCCTGTTACA---GTC-ACA-------------TTTTG--CTGA-ATCTTTGACGGTCTCT----GTGTCAGTCAAA
gi|36 : cT-GCTTCCAATTTTT---CTTATTGG------------A-ACCT-A-TGTTTCGTCACCAGCA-CAA-TGTTTGCAAATTGCCTT-TAATTG-AATTTAGG-AAACAAT-TTC-t
gi|37 : TT-CTTATTGGTTCGAAATCGTGA-ATCC-A-TATATCGTCACCAGTAACGA-TGTTTGCAAATTGTCTT-TGATTa
gi|38 : tga--ACTTCAAAA-ATCGCTTCACAAC-CTCTGTCAGATGT---ATATTGTGGA--GCATT-ATCATG-AAGTAGACGAACAT-G
gi|39 : CGTT------ATCGCACTGTGG-TACAATACC-CATTAC-CCATCAGACAA-CCCTCGTA----
gi|4 : acGATTT-----AGGTTGA-CTTCCGAGGCACCGACTGA-T-G--GCT-GAGC-----CA----AAGGCT--TG---T-C--G----G-----GACTTGTAATG-ACGACCAAA------------TA----TTTGGAAAAA------AG-TTGCATGAGGCTAGA-CCTGGA-G-AGTAT-GGTGGGTGTGGCAAGACGGTA--------------ACCTC-------CG----ACGA--CT--------TG------GTAATGGA--GCATT-ATCATG-AAGTAGACGAGTAT-GCCTA------AATCCTGATACACG---G-CGTCGTTT---GAT-A--TTTCTTGA-GA---TTTT-TAGT---ATAA-AGTCTCGGTGATACC-GACCTGCAAA----A-CTT-TTGACC---TTC--GGCAC-CAGAA-TTTATA-TG--G-CTATACTAT--------------------ATGCAATGAAGAA-CAT-T-CTTTG--TGCATGCGTATGG-TTCT---TTTGG-CAAGTTCTAG-AAGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GTTTCCAATTTTT---CATACCGGTTCGAAATAGTGA-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG--ATTTTGAGAAACATT-TT--GAGCAAT---TGCTTAG-CA-A-T-TTGTATAATACTCATACACGGTTTT-G
gi|4 : ATGTCAA---A-GGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAT-CA-CTTT--CAATT-ATTTCCC---------TGA---C------CT------T-----TTAAACATGGCTTGCCTGA-ACAA--GTC-ACAGATCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACCCT----ATGCCAGTCAGAAAATTCTTTCTCCACC-T-ACGAGTTA-TCTCA---------------tgttgttgtttcgtttgcttgtttgtttgtttcaaatgtcaaaggctttggcaatatcacgaatcgtgtatctgccatcactttcaattatttccctgaccttttaaacatggcttgcctgaacaagtcacagatcggccagattttgctgcatctttgacggaccctatgccagtcagaaaattctttctccacctacgagttatctca
gi|41 : gatttaggttgacttccgaggcaccgactgatggctgagccaaaggcttgtcgggacttgtaatgacgaccaaatatttggaaaaaagttgcatgaggctagacctggagagtatggtgggtgtggcaagacggtaacctccgacgacttggtaatggagcattatcatgaagtagacgagtatgcctaaatcctgatacacggcgtcgtttgatatttcttgagatttttagtataaagtctcggtgataccgacctgcaaaacttttgaccttcggcaccagaatttatatggctatactatatgcaatgaagaacattctttgtgcatgcgtatggttcttttggcaagttctagaagccttctaccgtgtttagttagccatattttgtttccaatttttcataccggttcgaaatagtgaacccatgtttcgtcaccagtaacaatgtttgcaaattgtctttgattgattttgagaaacattttgagcaattgcttagcaatttgtataatactcatacacggttttgtgttgttgtttcgtttgcttgtttgtttgtttcaa-TACAACACA-CATTAC-ATATCGAACAG-CCCTCGTA----
gi|42 : GTAGTTTAATGCT-AG-TATCTCAAAGAGCTTTTT-TGGC---ATAACATttcttccgtgttta
gi|43 : t-T-ATGAATTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAa
gi|5 : -ACCATG-AAGTAGATGAACAT-GCCAA------AATACTGACACA-G---GGTGTTGTTTA-TGGC-AAGTAGTTCTT-GAGCGTTTT-TAAT---ATAACAT-ATCAGTAATACC-GACATGTAAC----A-CTG-TTGCCC---TTC--GGCAC-CGGAA-TTAGTA-CG--G-CTTTACCAT-CA-CA-TGAG--GA-GAATATGCAATAAAGAA-C-----CTTTG--TGC-C---TATGG-TTCT---TTTGG-CAA---CTAC-AGACCTTC-TGCCG-TGTTTAGTTAGCCATATTTT-ATTTCCAA--TTTTT-ATTACTGGTTCGTAATAGTGA-ACGC-A-TGTTTTGTCACCAGTAATAA-TGTTTGCAAAC--CTTT-TGGTTG-AATTT-GGGAAACATG-TT--GAGCAAT---TGTTTGG-T----T-T------GTACTCGTACCCGTTTTT-AGTC-ATC---------------TGTGAT-------------GAAGT----TCG--TACTT-TCA-----------------AAGAT------T---GCTC-CCGCGATAG--------------C-AGTTT-TAGCA-GTATC-A---------------CTACCAT-AA-CGTT--CAATT-ATTTCTC--------TGGC---T------TG------TAGACATT-----TGCCATGCCCGTAACAGTCGTC-ACAGTTCGACT-AGA-TTTTG--CTGC-ATCTTTCACAGACTTTACAGGTGTCAGTCAAAATTTTCTCTCTCCATC-T-ACGAACTG-TCTCA---------------
gi|6 : C-AAAGCATT------ATCGCGCTGTGGGTACAATACA-CATTACGATATCCAACAGGCCCTCGCAAGCACGGTCGTT-TAAACTATGAAG-T-TGTAACATTTTGGGCTTAATCCGCTGATGACGAACAG-CTAGATTCTG----CCGCAGACT--TA---------G--AAGAGAATGAATGTAAGAGATGG-TA-------CAT-----GAGGGGATTGAATATGAA---TGG---ACAAG-------T-GGTGCTAT-TGTGCCAC--A-G--GAAAC--TTATT----G--ACTAGATCAAGCT--GTTTCGTTATCTTTTAACCTT--TACAGTACTGTGGTGCTTCTGGTGATGAGCAGGG-AAATGGGAACTAATGAAGAAGGGGATGAAATGGATA-ATTGAACAGTCCTGATCAA----A-----TC--AATGA---ATCACCGCATC--AGTCGAAGCGCGTTGTAATGCTCAGAATTATGC-AAATTTGTTT-ATTTACAAAC----ATTCATATAA--T-TTGATTTGGATAACGGTATTACTAACTCAAAATTAT----GCAAAAATTG-TTTATGTTACAAGAATTGATATT
gi|7 : aTT-ATA-TAAGATTAATATTATTTAG-------------------GTTTAT--A--A------GAA----TTTTAAA-AA----G---T-G--GTA--AA--GAT-GGTTAT----GAAATGATGA-AAAA-ATTGAAAAGAT-ATGGTGTGG-T-TAATA----ATTA--ATAT-AAAGAG--------A----TG-TGATT-TAAA-TAT--AG-TGTGTA--ATTT--GG-TTAAT--GATGATGA-GAG-AG-CTAGATTA-G----AT--AGAGAGATA---------G--AA-----TGGA---AAG---GGG-TA-------AA------GAGGG--TTGAATA--GA---TG------AAG-------T-GGTG-TATATGTG---C--A-GATGGAA---TTATTAG--A--ATAAGAT-A---T--GGTTAGTTA--TTTAA--ATT--TAAA-T----TGTTGATT-TGGTGATGAGGAAGG-GAAT-GGA--TGATGAAGAAGGGGATG-AGTGGA-ATA-TGAA-AGT--TGAT--ATGG-A-ATATTTTGGATAA-T-ATG-TCA---T--A-TTGAAGAGCGT--T-ATGAT-AAATTTATG--AAATTTG-TT-A-TTAAACAT----AT-----TTAATT-TTGCTTT-GA-AAC-GTATTATT-A---AAAATTAT----G---AAATTGTTTTAT-TT--AAGAATTGATATTT
gi|8 : taattAAATGCATGCTTAATCTCAGTT--ACTC--GTTT-----GAGTAGC-CGTCTGAGTCACTGACTGA-T-GC-GCTTGAGC-----CA----AGGGCT--TC---TTC--GT---GACT------TGTAACGTAAGACCA-GATCAGA-CTTCTTAAGTTTT---GAAAAAAGAAAAG-TTGT-TAAGGCTAGA-ACTGGA-G-AGTATTGGTGGGTATGGCAAGGCGGTGCC-----------------------TC-CTTCACAAG-TTC----AGATGT---ATATGAT-GA--ACATTAATCATA-AAGTAGACAAACATGGCCTA------AATGCTGACACA-GGGCA-AATCGTTTA-TGAT-A--TTTCT--A-GA-----------T---AT-ACA-TATCGATAATACC-AACCGGTAAT----ACCTT-TTCCCC---TTT--GGCAC-CGG--ACTTGTTACG--GCCTATA-CATCCA-TA-TTAG-AAG-GA-TATGCAATAAAGAACC-T-T-CTTTG--TGC-T---TATGG-TTCTGGCGTTGG-CAA---CTAC-A-GCATTC-TACCG-TA-TTATCTAACCATA-TTT-GCCTCCA---TTTTT-CTT
gi|9 : aAGTAAAGAA-C-T-TTCTTTAGTTGT-T---TACTG-ATCT---TTTGGGCAAG--CTAC-AGGTCTTCCTATCGGTGTTTAATTAGCCATATTTTTGCTTCCAATTTTTTC-TTAATTGGTTCAAAATAGT-A-ACCC-A-TGTTTCGTCAACAGCAACAA-TGTTTGCCACTTGTCTT-TAATTG-AATATAGG-AAACATT-TTC-AAGAAAT---TGCTTAGTCGAA-T-T------GT-CTCGTACCCGTATTT-GGTC-A-------------------TGGTAATGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AATAAAAT-GCTTCAAAAT--GAAAT---GCAC-CCAAGA-AGCGATTTGCCA------AGCTT-TTACATCTATCAACGAATCATA---GATCTGCTAT-CA--TTT--CAATT-ATTTCCC--------C-GA-----------C------T-----TT-----TGCATTGCCTGCTACA---GTC-ACCGGTCCATCAAGATTTTTC--CTAA-ATGTTCGACGGACTCC----GTGCCAGTTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|40 ): AGATACTTTATCATACCAATGCTTTGACTAAACTTGCTGAAACTTTGTA
Unaligned ( gi|44 ): GTAACACATAATCTTTTAAAGATTTGATTGTAA
Alignments
lowQualScore : 111111 111 11 22222 666666666666666666666 11 111111111111 22222222222222 11111111 1111 111111 111111 1111 1 1111 111 11 11111 1111 111 222222 222222222222222 111111 11 1111111111 1111 666666666666666666666666666666666666 11111 111 1111 111 222222222222222 111111 3333333333 11111 1 1 222 1111 333333333 1111 2222222222 7777777777777777777777 1111 666666666666666666 2222222222 999999999999999999999999999999999999999999999999999999999 11 111 2222222222 22222222222 11 3333333 222222 222222 11 1 1 1 11111 11 3333333 111 222 22222222 11 11 1 111 333333333333333333 1 1 1 2222222 1 1
lowQualScore : 555555 111 0 5 2 5 5 11 5 33333 1 222222222222222222222 1 0 1 5 55 3 3 999999999999 4 0 0 4 55 4 5 77777777777777 2 4 1 1 1 22222222 1 1111 5 66 3 3 3 111111 0 4 111111 3 1 2222 3 6666 7 777 0 0 4 5 0000 5 5 888 888 5 888 77 77 5 7 9999 5 2 77777 5 4 99999 55 4 777 1 55 777 4 4444 4 1 4 0 4 3 0 0 7777 2 2 222 3 3 3 1 2 3 4 2 999 7 111111 777 000000000000000 0 3 4 1 000000 66 3 22 66 8 999 777 4 66 777 6666666666 5 3 77777 4 3 44 4 2 3333 3 77 55 3 999999999999999999999999999999999999 11111 2 222 4 2 5 5 66 5 0000 0 555 1 999 4 4 777777777777777 6 5 66 5 77 5 0 6 666666 1111111111 1 66666 8 0 3 5 0 111 2 9999 888888888 0 5 2222 66 7777777777 1 6 8888888888888888888888 6 2 0 5 3 3 3 2 66 0000 6 6 666666666666666666 99 55 99 6 6 0000000000 666666666666666666666666666666666666666666666666666666666 5 3 11 888 9999999999 2 6 1 6 00000000000 11 2222222 2 999999 3 2 3 9 444444 33 0 55 0 3 2 0 0 3 1 7 22222 2 22 22 0000000 888 333 3 88888888 0 88 7 6 1 22 0 111 1 888888888888888888 55 0 0 0 2 3333333 0 0 7
lowQualScore : ...... ... . . . . . .. . ..... . ..................... . . . . .. . . ............ . . . . .. . . .............. . . . . . ........ . .... . .. . . . ...... . . ...... . . .... . .... . ... . . . . .... . . ... ... . ... .. .. . . .... . . ..... . . ..... .. . ... . .. ... . .... . . . . . . . . .... . . ... . . . . . . . . ... . ...... ... ............... . . . . ...... .. . .. .. . ... ... . .. ... .......... . . ..... . . .. . . .... . .. .. . .................................... ..... . ... . . . . .. . .... . ... . ... . . ............... . . .. . .. . . . ...... .......... . ..... . . . . . ... . .... ......... . . .... .. .......... . . ...................... . . . . . . . . .. .... . . .................. .. .. .. . . .......... ......................................................... . . .. ... .......... . . . . ........... .. ....... . ...... . . . . ...... .. . .. . . . . . . . . ..... . .. .. ....... ... ... . ........ . .. . . . .. . ... . .................. .. . . . . ....... . . .
lowQualScore : 888888 222 2 1 8 0 0 99 0 11111 4 666666666666666666666 4 4 4 0 66 1 4 777777777777 4 9 8 4 44 4 0 11111111111111 0 4 7 1 1 44444444 1 2222 3 11 6 6 6 555555 5 0 111111 6 0 7777 9 2222 3 000 7 1 4 7 6666 0 0 888 333 7 666 11 99 7 9 3333 0 8 55555 0 0 88888 55 0 000 2 44 888 4 1111 4 9 4 9 4 6 4 9 2222 2 3 888 1 1 1 4 9 3 9 6 111 3 111111 000 888888888888888 5 6 0 0 777777 33 9 11 11 9 888 888 4 11 888 7777777777 7 6 66666 0 9 11 0 3 4444 3 88 00 6 000000000000000000000000000000000000 11111 2 222 4 5 0 0 99 0 6666 2 666 4 666 4 4 888888888888888 7 7 99 7 99 7 7 6 444444 3333333333 0 77777 0 8 3 6 6 222 5 3333 222222222 8 7 1111 33 4444444444 0 0 7777777777777777777777 7 5 7 7 6 6 6 3 33 6666 7 7 777777777777777777 22 00 22 7 7 5555555555 888888888888888888888888888888888888888888888888888888888 2 2 55 333 2222222222 5 7 0 7 22222222222 00 2222222 5 222222 2 5 2 8 000000 88 0 88 2 2 5 0 0 2 0 0 00000 5 55 88 0000000 000 222 2 33333333 7 33 3 7 0 55 0 222 2 222222222222222222 00 0 0 0 5 8888888 0 0 0
consensus : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-C--G----GAC-AGGAGATGTAACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTATACCGTTGG--AA--G-TATTGAATAG----G---T-T--TCAAGAGT-AT-CGTCATCCACGAAATCGCGC-AAAGCGTTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACTAT--AG-T-TGTA-CATTT--GGCTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
Reference ( family-1073 ) : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-C--G----GAC-AGGAGATGTAACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTATANCGTTGG--AA--G-TNTTGAATAG----G---T-T--TCAAGA-T-AT-CGTCATCCACGAAATCGCGC-AAAGCGTTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACTAT--AG-T-TGTA-CATTT--GGCTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|1 : AAGTGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGATCTTCTGAGCC-CTGACTGA-T-G--ACT-GAGCAAATTTAAGGGTTAAT---GT-CATG----AAC-AGGAGATAATACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGGAAAAGAAAAAG-TCGTAGAAGGCTAGACTCTTGC-GCAGTAT-GGTGGGTGTAGCAAGATGATACCCT--TC--AA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTTACATA-G---A-TGTAGTTTA-TGCT-A--T-TCTCAA-GAGCTTTTT-TAGT---GTAGCATTATTGGTAATACC-GACC-GTAAC----A-CTT-TTGTCC---TAT--AGCATGCGGAAATTTGTAACG--G-CCATACCAT-CATCATTAAG-AGAGGG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TATGG-ATCT---TTTGG-CAA----TAC-AGGTCTTC-TA-TG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTTACTTATTGGTTCAAAATAGT-A-ACCC-A-TG-TTCGTCA-CAGCAACAA-TGTTCGCAAATTGTCTT-TAATTG-AATATAGGAAAACATC-TTC-GA--AAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTATTT-GGTCAATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTTG--TACTT-TCATA-AAT---AC-GCTTCAAAAT--GAAAT---GCACACCAAGA-AGCGATTTACCAA---C-AGCTT-TAGCA-TTATC-ACGAATCATGA--GATCTGCTATACA-ATTT--CAATT-ATTTTCC--------CCGA---T------CC------T-----TT-----TGCTTTGCCTGCTACA---GTC-A-AGGTCCATC-AAA-TTTTATCCGGC-ATCTTCGACGGACTCC----GTGCCAGTCAGAAATTTCTTTCT-CA-C-T-ATGAACTG-TTCCA---------------GA-C-CATTATAATCT-CCCAA-T--AAGTGAATCA--TCTGCATTA-CCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-AT--TATCTATAGCT-----ACATTCTC-ACAG-GGTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCAACTGGCTCTATCGCGAAATGACTTAATATTAAGTTTAAAATTATGTGGAACTGTAAGGCT----CATGTTTA-AT--TT--------G-TTTTGGA------------------AAG-----------ATCCATGAAATGGCGC-AAAGCATTATCACGCTGTGG-TACAATACA-CATTAC-ATATCCAATA-----TCGCA----CG-TTGTTATAAACTATC-AGTT-TGTA-CATTT--GGCGTAAT--GCTGATGACGAG-AG-CTAGATCT-G----CC--AGACT--TA---------G---A-----TG-------G---TGG-TA-------CA------GAGGGGATTGAAT-TGAAT--TG----------GACAAGT-GGTGCTAT-TGTGC--CCAA-G--GGAACAGTTATTTGACG--ATTAGATCA---CTAGGTTCGTTATCTTTTG--CCTTATACA-TACTGTGTTGCTTCTGGTGATGATCAGGGAAAAT-GGAACTAATGAGAGTGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-GTA-ATATTT--GATGA-TCATGATCACATTCAG-TTGAAGCGCGT--TAATGCTCAAATTTATGCTAAATTTG-TT-GTTTACATAC----AT-----TCA----TTAATTTGGA-AAC-ATATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|10 : gACTTCT-CGCAATT--AAGTAAA-CA---CTGCATTT-CTGAATCACTGAGCTTTATGCTAACTT--A------TATAAGCTTT-AA--TT---AGATCT-----ACATTCTC-ACAGCATTTCCTAGCCATTTTCACAA-CAGTGGTCAA-C-GAATGGCTCTAT--CGAAATGACTT-AT-----GTTTAAAACTATGTGGAGCTG-AAGGCT----CGTATTTATTTATTT----------TTTTGAAAAGTAACGCT-T-T--TCAAGA-TTAT-CATCATCCATGAAATTGCGC-AAAGCGTTTTCGCGCTGTGG-TACAATACA-CATGAC-ATATTCAACAG-CCCTCGTA----CG-TCG-T-TAAA------AG----------TTT--GGCTTAAT--GCTGATGACAAGCAG-CTAGATCC-C----TC--AGACT--TGGAAGGGAATG--AA-----TGGA---AAGT--TGG-TA-------CA------GA-GGGATTGAATATGAA---TG----------GACAAAT-GAAGTTAT-TGTG
gi|11 : CATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGG-----TAA---ACGGACAGAAT-GTCACA-GGAC-----AAAAAG---------T-C--------AC-AGGACATA-AAAG-ACGACCA-GAGAAGAACTGCTTAAGTTTTTGG---------------C---CAAGGCTAGA-TCTGGC-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TCTCCA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ACGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCCA------AATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-GAGCTTTTT-TAGT---ATAGCA-TATTTGTAATACCAGGCCGGTAAC----A-CTT-TTGCCC---TTTTAGGCAT-CGT-AATTTGT-ACA--G-CTATACCAT-CA-CA-TTAG-A-A-GG-TATGCAGTAAAGAA-C-T-T-CATTG--TGC-T---TACGG-AT
gi|12 : TTTTT-CATACTGGTTCAAAATAGT-G-ACCC-AATGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTGGTGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTTTGGTC-ATCTGTCTATATA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TATCTTT--CAATT-ACTT-CC--------CAGAGTTT------TCAAGACAT-----TT-----TGCCTTGCCTGTTACA---ATCAATAGGTCGGCC-AGA-TTTTG--CAGTAATCTTTGACAGACTCT----GTG------AGA---TTCTTTCTCAA-C-TGACGAACTG-TCCCA---------------
gi|13 : aAAATGCATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGA-CTTCTGAGCCACAGACTAA-T-G--ACT-AAAC-----CAAGGGCT--T---GT-C-----------AGGAGATGTAACG-ACGACCA-GAGAAAAACTGCTTAAGTTTT-GGAAAAAGGAAAAAG-TCGTATAAGGCTAGA-ACTGGC-G-AGTAT-GGTGGATGTGGCAAGACGGTACCCTTCTC--CG--ACTTCAAAA-A-------GCA-------------------ATTTGATCGA--GCATT-ATCATA-GAGTAGACGAACAT-ACCTAAAATTTAATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-CAGCTTTTTATAGTATAATAACA-TATCGGTAATACC-GACCGGTAGC----A-CTT-TTGCCC---T
gi|14 : aAAATGCATGCTTAACTTACGTTTCACTCTGATTT-----GGGTAGA-CCTCTGAGCCACTGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-----------C-AGGAAATGTAAAG-ACGACC-AGAGAATATCTGATTAAG--TTTAAGAAAAAGAAAAAT-TCGTATAAGGCTAGC-TCTGGC-G-AGTAC-GGTGAGTGCGGCAAGACGGTACCCTTCTC--AG--ACTTTTAAA-ATTGCTTCACAAG---C----A--------ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTGATATA-G---A-TGCAGTTTA-TGCTAA--TATCTCAA-AAGCTTTTT-TAGT---ATAGCAT
gi|15 : TGGTTCAAAATAGT-G-ACCCCA-TGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTG-TGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTT-GGTC-ATCTGTCTATACA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TA-CTTT--CAATT-ACTTCCCAGAGTTTTCAGA-----------C------A-----TT-----TGCCTTGCCTGTTACA---ATC-ATA
gi|16 : cAAACTGC-G-ATCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCG-CAGTTTGCAAA---TT-TTC-----AATATATATTTGG-CC-A-TCT------TTACGCGGATTCTTTTCT-GATC-ATTTGTCAGCAAA-----TGTGGT-ATCCATCTTGCATTTATC-TTTCGGAGACCT-----A-AAT---GCTTTTTCAAAATTGAAAATATGGTTC-CCGA-----TGATATATCAA---CTAAATT-T-GCA-ATACC-TC---TTGTGGTCAATCACCCAT-CGTCATTAACAATT-TTTT
gi|17 : cCCAA-CCATTTCTACAA-CAGTGGACAA-C-GACTGTCTCTATT-TGAA-TGACT--GTA-TAACTTTAAAACTATGTAGAGCTG-AAGGTT----CGTATTTATAACGTTGG--AAAGG-TATTGAATAG----GGA-TAT--TCAAGAGT-ACATGT-ATCCACGAAATCGTGC-AAAGCGTTATCGAGCCATGG-TATAATATA-CCTTAC-ATATCAAAtttaaatttgttca
gi|18 : CCA-CCT-ATGAACTGGTCCCA---------------GGCCTCATTAACTTCT-CCCAATT--AAAGAAA-AAAATCTGCATTATCCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A--------ATATCT-----ACATTCTC-ACAGCGTTTTCTA-ACATTTTCAACAACAGTGGTCAACCCGA-TGGCTCTA-T-CGAAATGATT
gi|19 : CATTCGAAAACTTCATTCTTTA-CCT-ACGAACTG-TCTCATAACATACCATATCAGACC-CATAAACTTCAACTTAATTTTCAGTAAA-AA--TCTGCATTA-CCGAATGATTGAGTTTTGTGCTAACTTTTATTCATGTATCA-CTTC-----TA---ATTCCTTATAAATATTCTCGAC-TCGTTTTCTA-aa
gi|2 : CATAGTTT-GCTTCCAGTTGTTTT---TATTGGATCAAA-----------------TTTCGTAACCAGCAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAACCTTT-TTA-AA--AAT---TGCTTAG-CGGA-T-A------GTACTCATACTCGTTTTT-GGTC-TTCTACCAATATA-----TGCGGT-ATGTATCTAGCAGAAATATTTT-G--TACTT-TCA-A-A-C---AT-GCTTCAAAAT--GAAAT---GC--------------------CAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAC-TA-TTTT--CAATT-ATTTCCC---------TGA-----------C------G-----TT-----TGCCTTGCCTGTAACA---GTC-ACAGGACCGCC-AGA-TTTTG--CCAC-ATCTTTGACAGACTCA----GTGCCAGTCAGAAATTTCTTTCTCCA-CCT-ATGAACTG-CCCCA---------------GACC-CATTAATTTCT-CCCAATT--AAATAAA-AA--TCAGTATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-ACGGTA---ATAACT-----ACATTCTC-ACAGCTTTTCTCAGCCATTTTAAC-AACAGTGGTCAA--TGACTGGCTCTACT--GAAATGAC----TA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----TGTGTTTATACTGTTTGAAAA--G-TATTGAATAG----AGCTT-T--TCAAGAGT-AT-CGTCATCCACCAAATCGTGC-AAAACATTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-TAAACT-------T-TG-N-NNNNN--NNNNNATT--AC--ATATCGAACAGTCCACGTAC-GTCGTTC--AAACT--TT---------GCTGA-----TGAC---AAG---CAGCTAGATCCCCCAGACTTGGAAGGGAGTGGATG-GAAAGTTGGTGCACAGGGGACAAAT-GGCGCTAT-TGTGC--C--ACA--GGAAC--TTATTGac
gi|2 : CTTTGN-NNNNNNNNN-NATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-CAAACT-------------------------T--T--GCTGATGACAAGCAG-CTAGATCC-C----CC--AGACT--TG---------G--AA------------------------------------------GGGA------GTGGA---TG----------GA-AAGTTGGTGC-A---------C--A-G--GGGAC--AAATGGC--GCTATTGTGCCA---C--AG---G--AACTT--A---TT--GACA-TAATATGT-GCTTCTGGTAATGAGCAGGG-AAAT-GGAACTGATGAAGATGGGGATGGAGTGGA-A-A-TGAACAAT-CTGATCGAT-T-AGATATTA--GATGATT-ATGATCAacataatatgtgcttctggtaatgagcagggaaatggaactgatgaagatggggatggagtggaaatgaacaatctgatcgattagatattagatgattatgatcatgatgatgactgatttgataatgctcactttattactgatttg
gi|20 : catagtttgcttccagttgtttttattggatcaaatttcgtaaccagcaacaatgtttgcaaattgtctttgattgaatttaggaaacctttttaaaaattgcttagcggatagtactcatactcgtttttggtcttctaccaatatatgcggtatgtatctagcagaaatattttgtactttcaaacatgcttcaaaatgaaatgccaacagctttggcaatatcacgaatcgtgtatctgccactattttcaattatttccctgacgtttgccttgcctgtaacagtcacaggaccgccagattttgccacatctttgacagactcagtgccagtcagaaatttctttctccacctatgaactgccccagacccattaatttctcccaattaaataaaaatcagtattaccgaatcactgagttttgtgctaacttttatataagctttacggtaataactacattctcacagcttttctcagccattttaacaacagtggtcaatgactggctctactgaaatgactataagtttaaaattatgtggagctgaaggcttgtgtttatactgtttgaaaagtattgaatagagcttttcaagagtatcgtcatccaccaaatcgtgcaaaacattatcgcgctgtggtacaatacacattacatatcgaacagtccacgtacgtcgtttaaa-CA-TGAA-AAG-AA-TATGTAATAAAGAA-C-CGT-CTTTG--TGC-T---GATGA-TTCT---TTTGG-CAA---CTAT-AGGCCTTC-TACTG-TATTTAGTTAGCCATATTAT-GTTTCCAATTTTCT---TTATTGCTTCGAAATAGTAA-ACTC-A-TGTTTTGTCCTCAGCAACGA-TGTTAGTAAATTATCTT-Ttgatgatgactgatttgataatgctcactttattactgatttg
gi|21 : AGAA-C-T-TTCTTTG--TGC-T---C-TGGCATAT---TCTTG-CTA---TTCCTTGACGTTC-C-CCT-TGTTCAGTCACCCACACCTT-G---TCAATTTTTCT-TTGA--GTTTCAAAGTAGT-GTACCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCGCAGTTT
gi|22 : tgcTACCCGTATTT-GGTC-ATCTGTCAATATACCGTATGTGAT-GTGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCAAGATAGCGATATGCCAA---C-AGCTT-CAACA-TTATC-ACGAACCATG---GATCTGCTAT-C
gi|23 : aGTAATTCC-GACCAGTAACGAAAA-CCTGTTACCCGGCTTC--GACAC-CGGAATTATGTACCGCAG-CTATAACA
gi|24 : AATT--CACTAAA-AA--TCTGCATTA-CCGAATGATTAAGTTTTGTACGAACGTTTA------TATAAGCTCTAA---TA---Aataaacggggaggagaatataacaataacaatccttattatagtggagtctatgaaggttcatttg
gi|24 : GACTGGCTTTATT--GAAATGACT----------------ATTA-GTGAAGCTG-AAGGCT----CATGTTTATACTGTTGG--AA--gactggctttattgaaatgactattagtgaagctgaaggctcatgtttatactgttggaaa
gi|25 : aattcactaaaaatctgcattaccgaatgattaagttttgtacgaacgtttatataagctctaataaTTTCACTCTGATTTTATTTGGGTAGA-CCTCGGAGCC----ACTGA-TCG--ACT-GAGC-----CA---------------------------AGGAGATGTAACG-ATAACC-AGAGAAGAACTTCTTAAGTTT---------------AG-TCGTGTAAGGCTAGA-TCTGGA-G-AGTAa
gi|26 : AGATG-AAGGCTGAGACGTGTTTATACCGTTAG--AA--GCTATTCAACAG--------------------T-AT-CGTCATCCGCGAAATCGTGCCAAAGCATTATGGCGCTGTGA-TACAATACATTATTAC-ACATCGAACAG-CCCT
gi|27 : CTGCCAT-CA-CTTT--CAATT-ATTTCCC--------TGAA---TTTGGGACA------T-----TA-----T-CCTTGCCTGTTACA---GTA-ACAGGTCGGCC-AGA-TTGTG--CTGC-ATCTTTGATGGACTCT----GTGCCAGCCAGAAATT
gi|28 : AAAGTTATGC-AAATTTG-TTTGTTTACATACTTTAAT-----TAA--TGTTAATTTG-A-AAC-GTATCACT-ACTCAAAACTATATATGC-AAACTTG-TTTAT-TTGCATGAATTGATATTTAct
gi|29 : TG-AAGGCT----CATGTTTATACCATTGG--AAAGG-TATTGAGTAGA---G---C-TAATCAAGAGT-AT-CATCATCCACAAAATTGTGC-ACAATATTATTGTGGCGTGG-TACAATACA-CATTAC-c
gi|3 : TGATTT-----GGGTAGA-------AGTTGGAGA-TGA-T-G--A-T-GAGCTATT-TAAGGGCT--TAAAAT-T--GTAATGATAAGGAGATGTAAAG-TC-----AGAG-AGAA-TGATTTAGTTTT--GGAAAAGG--AAAG-T-GTATAAGG-TAG--TATGGT-G-AGT-T-GGTGGGTGTGG-AAGACGATA---T--TT--AA--ATTTAAAAACATTGATT---AAG--TA----AGATGT----TGTG-TGGA--G-ATT-ATAAAA-AAGTAGACGA--AT-GC----------ATG-TGA---A-G---A-TGTAGTGTA-TGA------GTTTAAA-GAGTTTTTTGTATT---ATTAGAATATTGGT-ATA---GA-AGGTAAA----G---T-TTGAAT---TTA--GG----TGG--ATTTGT-ACG--G--TATA---------A-TAAATAGA-GG-TATGTAGT-AAGA----T-T-TTTTG--TG--T---TATGG-A------TTTGG--A------AT-AG---TTA-TATCG-TGTTTAATTAG--ATATTTT-GTT---AAAATTTTT-ATTATTAGTT---AAT-GT-A-A----A-TGTTT--------GTAAAGACTGTTTG-AAATTGTTTT---ATTG-AATATAGGAA---ATT-TT---AGAAAT---TG-TTAG--G-G-T-T------GTA-TAGTA-ATGTATTT-GGT--ATCTGT-AATAT------TGTGGT--TG-A--TGG-AGAAAT-TTTTTG--T--TT-T---A-AAT---AT-GTT---AAAT--GAAAT---GAA-----AGA-AG-GATTTGCAAATATT-AGATTATAG-A-ATAT------ATTGTG---TAT-----AT-TA-ATTT--TAACTGATTT
gi|3 : AGTCAGA---TTTTTT----A---T-ATGAA-TG-T---A---------------GGC---ATTAATTT-------AT----AGTAAA-AA--TATGTA------AGATAATT-AGTTTTGTG-TAA-TTTTA------TATAAGATTA-A---TA---TTATTT-----tgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaagtcagattttttatatgaatgtaggcattaatttatagtaaaaatatgtaagataattagttttgtgtaattttatataagattaatattattt
gi|30 : tgatttgggtagaagttggagatgatgatgagctatttaagggcttaaaattgtaatgataaggagatgtaaagtcagagagaatgatttagttttggaaaaggaaagtgtataaggtagtatggtgagttggtgggtgtggaagacgatatttaaatttaaaaacattgattaagtaagatgttgtgtggagattataaaaaagtagacgaatgcatgtgaagatgtagtgtatgagtttaaagagttttttgtattattagaatattggtatagaaggtaaagtttgaatttaggtggatttgtacggtataataaatagaggtatgtagtaagattttttgtgttatggatttggaatagttatatcgtgtttaattagatattttgttaaaatttttattattagttaatgtaaatgtttgtaaagactgtttgaaattgttttattgaatataggaaattttagaaattgttagggttgtatagtaatgtatttggtatctgtaatattgtggttgatggagaaattttttgttttaaatatgttaaatgaaatgaaagaaggatttgcaaatattagattatagaatatattgtgtatattaattttaactgattttgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaTAAGTTTT-GAAAAAAGGAAAAAGGTTGCATGGGGCGAAA-TTTGGAAG-AGTAT-GATGGGTATGGCAAGACAGTAACCT--TC--AATGACTTCAAAA-ATTGCTTCACACG-CTC----A
gi|31 : ACAAGACTC----AGATGCTCCATGTGGTGGGAGGCATT-ATCATGGAAGTTGACGAACAT-GCCTA------AATCCT-ATTTA-T---A-AATAACTTA-T-AT-A--AATCTT---GAGCTTTTT-T
gi|32 : GTCAT-TGCTTG-AATTTAG-AAAATATT-TTG-GGG-AAT---TGCATAG-TG-AAC-T------GTACTCTTGCCCGTTTTT-GATC-ACCTGTCAATATA-----TCCGGA-ATGCATCAGGCAGAtg
gi|33 : -CA-CA-TTAG-A-A-GG-TATGCAGTAAAGAA-C-C-C-CTTTG--TGC-T---TACGG-ATGT---TTTGG-CAA---TTAC-AGTTCTTC-TATCG-TGTTTATTTAGCCATATTTT-GCTTCCAA
gi|34 : -ATCATG-AAGTAGACGAACAT-GCCTA------AATCCGGACACA-G---G-CATCGTTTA-TGAC-A--TTTCTTA---AGCTTTTT-AAGT---ATAACATC-TCGGTAATACC-GACCTGTA
gi|35 : ATCTGCCAC-CG-CTCT--CGATT-ATTTCCC--------CCGA-----------C------T-----GT-----TGCCTTGCCTGTTACA---GTC-ACA-------------TTTTG--CTGA-ATCTTTGACGGTCTCT----GTGTCAGTCAAA
gi|36 : cT-GCTTCCAATTTTT---CTTATTGG------------A-ACCT-A-TGTTTCGTCACCAGCA-CAA-TGTTTGCAAATTGCCTT-TAATTG-AATTTAGG-AAACAAT-TTC-t
gi|37 : TT-CTTATTGGTTCGAAATCGTGA-ATCC-A-TATATCGTCACCAGTAACGA-TGTTTGCAAATTGTCTT-TGATTa
gi|38 : tga--ACTTCAAAA-ATCGCTTCACAAC-CTCTGTCAGATGT---ATATTGTGGA--GCATT-ATCATG-AAGTAGACGAACAT-G
gi|39 : CGTTATCGCACTGTGG-TACAATACC-CATTAC-CCATCAGACAA-CCCTCGTA----
gi|4 : acGATTT-----AGGTTGA-CTTCCGAGGCACCGACTGA-T-G--GCT-GAGC-----CAAAGGCT--T---GT-C--G----G-----GACTTGTAATG-ACGACCAAA------------TA----TTTGGAAAAA------AG-TTGCATGAGGCTAGA-CCTGGA-G-AGTAT-GGTGGGTGTGGCAAGACGGTA--------------ACCTC-------CG----ACGA--CT--------TG------GTAATGGA--GCATT-ATCATG-AAGTAGACGAGTAT-GCCTA------AATCCTGATACACG---G-CGTCGTTT---GAT-A--TTTCTTGA-GA---TTTT-TAGT---ATAA-AGTCTCGGTGATACC-GACCTGCAAA----A-CTT-TTGACC---TTC--GGCAC-CAGAA-TTTATA-TG--G-CTATACTAT--------------------ATGCAATGAAGAA-CAT-T-CTTTG--TGCATGCGTATGG-TTCT---TTTGG-CAAGTTCTAG-AAGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GTTTCCAATTTTT---CATACCGGTTCGAAATAGTGA-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG--ATTTTGAGAAACATT-TT--GAGCAAT---TGCTTAG-CA-A-T-TTGTATAATACTCATACACGGTTTT-G
gi|4 : ATGTCAA---A-GGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAT-CA-CTTT--CAATT-ATTTCCC---------TGA---C------CT------T-----TTAAACATGGCTTGCCTGA-ACAA--GTC-ACAGATCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACCCT----ATGCCAGTCAGAAAATTCTTTCTCCACC-T-ACGAGTTA-TCTCA---------------tgttgttgtttcgtttgcttgtttgtttgtttcaaatgtcaaaggctttggcaatatcacgaatcgtgtatctgccatcactttcaattatttccctgaccttttaaacatggcttgcctgaacaagtcacagatcggccagattttgctgcatctttgacggaccctatgccagtcagaaaattctttctccacctacgagttatctca
gi|41 : gatttaggttgacttccgaggcaccgactgatggctgagccaaaggcttgtcgggacttgtaatgacgaccaaatatttggaaaaaagttgcatgaggctagacctggagagtatggtgggtgtggcaagacggtaacctccgacgacttggtaatggagcattatcatgaagtagacgagtatgcctaaatcctgatacacggcgtcgtttgatatttcttgagatttttagtataaagtctcggtgataccgacctgcaaaacttttgaccttcggcaccagaatttatatggctatactatatgcaatgaagaacattctttgtgcatgcgtatggttcttttggcaagttctagaagccttctaccgtgtttagttagccatattttgtttccaatttttcataccggttcgaaatagtgaacccatgtttcgtcaccagtaacaatgtttgcaaattgtctttgattgattttgagaaacattttgagcaattgcttagcaatttgtataatactcatacacggttttgtgttgttgtttcgtttgcttgtttgtttgtttcaa-TACAACACA-CATTAC-ATATCGAACAG-CCCTCGTA----
gi|42 : GTAGTTTAATGCT-AG-TATCTCAAAGAGCTTTTT-TGGC---ATAACATttcttccgtgttta
gi|43 : t-T-ATGAATTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAa
gi|5 : -ACCATG-AAGTAGATGAACAT-GCCAA------AATACTGACACA-G---GGTGTTGTTTA-TGGC-AAGTAGTTCTT-GAGCGTTTT-TAAT---ATAACAT-ATCAGTAATACC-GACATGTAAC----A-CTG-TTGCCC---TTC--GGCAC-CGGAA-TTAGTA-CG--G-CTTTACCAT-CA-CA-TGAG--GA-GAATATGCAATAAAGAA-C-----CTTTG--TGC-C---TATGG-TTCT---TTTGG-CAA---CTAC-AGACCTTC-TGCCG-TGTTTAGTTAGCCATATTTT-ATTTCCAA--TTTTT-ATTACTGGTTCGTAATAGTGA-ACGC-A-TGTTTTGTCACCAGTAATAA-TGTTTGCAAAC--CTTT-TGGTTG-AATTT-GGGAAACATG-TT--GAGCAAT---TGTTTGG-T----T-T------GTACTCGTACCCGTTTTT-AGTC-ATC---------------TGTGAT-------------GAAGT----TCG--TACTT-TCA-----------------AAGAT------T---GCTC-CCGCGATAG--------------C-AGTTT-TAGCA-GTATC-A---------------CTACCAT-AA-CGTT--CAATT-ATTTCTC--------TGGC---T------TG------TAGACATT-----TGCCATGCCCGTAACAGTCGTC-ACAGTTCGACT-AGA-TTTTG--CTGC-ATCTTTCACAGACTTTACAGGTGTCAGTCAAAATTTTCTCTCTCCATC-T-ACGAACTG-TCTCA---------------
gi|6 : C-AAAGCATTATCGCGCTGTGGGTACAATACA-CATTACGATATCCAACAGGCCCTCGCAAGCACGGTCGTT-TAAACTATGAAG-T-TGTAACATTTTGGGCTTAATCCGCTGATGACGAACAG-CTAGATTCTG----CCGCAGACT--TA---------G--AAGAGAATGAATGTAAGAGATGG-TA-------CAT-----GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGCCAC--A-G--GAAAC--TTATT----G--ACTAGATCAAGCT--GTTTCGTTATCTTTTAACCTT--TACAGTACTGTGGTGCTTCTGGTGATGAGCAGGG-AAATGGGAACTAATGAAGAAGGGGATGAAATGGATA-ATTGAACAGTCCTGATCAA----A-----TC--AATGA---ATCACCGCATC--AGTCGAAGCGCGTTGTAATGCTCAGAATTATGC-AAATTTGTTT-ATTTACAAAC----ATTCATATAA--T-TTGATTTGGATAACGGTATTACTAACTCAAAATTAT----GCAAAAATTG-TTTATGTTACAAGAATTGATATT
gi|7 : aTGTGG-T-TAATA----ATTA--ATAT-AAAGAG--------A----TG-TGATT-TAAA-TAT--AG-TGTGTA--ATTT--GG-TTAAT--GATGATGA-GAG-AG-CTAGATTA-G----AT--AGAGAGATA---------G--AA-----TGGA---AAG---GGG-TA-------AA------GAGGG--TTGAATA--GA---TG-------------AAGT-GGTG-TATATGTG---C--A-GATGGAA---TTATTAG--A--ATAAGAT-A---T--GGTTAGTTA--TTTAA--ATT--TAAA-T----TGTTGATT-TGGTGATGAGGAAGG-GAAT-GGA--TGATGAAGAAGGGGATG-AGTGGA-ATA-TGAA-AGT--TGAT--ATGG-A-ATATTTTGGATAA-T-ATG-TCA---T--A-TTGAAGAGCGT--T-ATGAT-AAATTTATG--AAATTTG-TT-A-TTAAACAT----AT-----TTAATT-TTGCTTT-GA-AAC-GTATTATT-A---AAAATTAT----G---AAATTGTTTTAT-TT--AAGAATTGATATTT
gi|8 : taattttatataagattaatattatttaggtttataagaattttaaaaagtggtaaagatggttatgaaatgatgaaaaaattgaaaagatatggAAATGCATGCTTAATCTCAGTT--ACTC--GTTT-----GAGTAGC-CGTCTGAGTCACTGACTGA-T-GC-GCTTGAGC-----CAAGGGCT--T---CTTC--GT---GAC-T-----TGTAACGTAAGACCA-GATCAGA-CTTCTTAAGTTTT---GAAAAAAGAAAAG-TTGT-TAAGGCTAGA-ACTGGA-G-AGTATTGGTGGGTATGGCAAGGCGGTGCC-----------------------TC-CTTCACAAG-TTC----AGATGT---ATATGAT-GA--ACATTAATCATA-AAGTAGACAAACATGGCCTA------AATGCTGACACA-GGGCA-AATCGTTTA-TGAT-A--TTTCT--A-GA-----------T---AT-ACA-TATCGATAATACC-AACCGGTAAT----ACCTT-TTCCCC---TTT--GGCAC-CGG--ACTTGTTACG--GCCTATA-CATCCA-TA-TTAG-AAG-GA-TATGCAATAAAGAACC-T-T-CTTTG--TGC-T---TATGG-TTCTGGCGTTGG-CAA---CTAC-A-GCATTC-TACCG-TA-TTATCTAACCATA-TTT-GCCTCCA---TTTTT-CTT
gi|9 : aAGTAAAGAA-C-T-TTCTTTAGTTGT-T---TACTG-ATCT---TTTGGGCAAG--CTAC-AGGTCTTCCTATCGGTGTTTAATTAGCCATATTTTTGCTTCCAATTTTTTC-TTAATTGGTTCAAAATAGT-A-ACCC-A-TGTTTCGTCAACAGCAACAA-TGTTTGCCACTTGTCTT-TAATTG-AATATAGG-AAACATT-TTC-AAGAAAT---TGCTTAGTCGAA-T-T------GT-CTCGTACCCGTATTT-GGTC-A-------------------TGGTAATGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AATAAAAT-GCTTCAAAAT--GAAAT---GCAC-CCAAGA-AGCGATTTGCCA------AGCTT-TTACATCTATCAACGAATCATA---GATCTGCTAT-CA--TTT--CAATT-ATTTCCC--------C-GA-----------C------T-----TT-----TGCATTGCCTGCTACA---GTC-ACCGGTCCATCAAGATTTTTC--CTAA-ATGTTCGACGGACTCC----GTGCCAGTTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|40 ): AGATACTTTATCATACCAATGCTTTGACTAAACTTGCTGAAACTTTGTA
Unaligned ( gi|44 ): GTAACACATAATCTTTTAAAGATTTGATTGTAA
Alignments
lowQualScore : 111111 111 11 22222 666666666666666666666 11 111111111111 22222222222222 11111111 1111 111111 111111 1111 1 1111 111 11 11111 1111 111 222222 222222222222222 111111 11 1111111111 1111 666666666666666666666666666666666666 11111 111 1111 111 222222222222222 111111 3333333333 11111 1 2 222 1111 444444444 1111 777777777777777777777777777777 1111 666666666666666666 2222222222 999999999999999999999999999999999999999999999999999999999 11 111 2222222222 22222222222 11 3333333 222222 222222 11 1 1 1 11111 11 3333333 111 222 22222222 11 11 1 111 333333333333333333 1 1 1 2222222 1 1
lowQualScore : 555555 111 0 5 2 5 5 11 5 33333 1 222222222222222222222 1 0 1 5 55 3 3 999999999999 4 0 0 4 55 4 5 77777777777777 2 4 1 1 1 22222222 1 1111 5 66 3 3 3 111111 0 4 111111 3 1 2222 3 6666 7 777 0 0 4 5 0000 5 5 888 888 5 888 77 77 5 7 9999 5 2 77777 5 4 99999 55 4 777 1 55 777 4 4444 4 1 4 0 4 3 0 0 7777 2 2 222 3 3 3 1 2 3 4 2 999 7 111111 777 000000000000000 0 3 4 1 000000 66 3 22 66 8 999 777 4 66 777 6666666666 5 3 77777 4 3 44 4 2 3333 3 77 55 3 999999999999999999999999999999999999 11111 2 222 4 2 5 5 66 5 0000 0 555 1 999 4 4 777777777777777 6 5 66 5 77 5 0 6 666666 1111111111 1 66666 8 0 3 0 111 2 9999 888888888 0 5 2222 77 4 000000000000000000000000000000 6 2 0 5 3 3 3 2 66 0000 6 6 666666666666666666 99 55 99 6 6 0000000000 666666666666666666666666666666666666666666666666666666666 5 3 11 888 9999999999 2 6 1 6 00000000000 11 2222222 2 999999 3 2 3 9 444444 33 0 55 0 3 2 0 0 3 1 7 22222 2 22 22 0000000 888 333 3 88888888 0 88 7 6 1 22 0 111 1 888888888888888888 55 0 0 0 2 3333333 0 0 7
lowQualScore : ...... ... . . . . . .. . ..... . ..................... . . . . .. . . ............ . . . . .. . . .............. . . . . . ........ . .... . .. . . . ...... . . ...... . . .... . .... . ... . . . . .... . . ... ... . ... .. .. . . .... . . ..... . . ..... .. . ... . .. ... . .... . . . . . . . . .... . . ... . . . . . . . . ... . ...... ... ............... . . . . ...... .. . .. .. . ... ... . .. ... .......... . . ..... . . .. . . .... . .. .. . .................................... ..... . ... . . . . .. . .... . ... . ... . . ............... . . .. . .. . . . ...... .......... . ..... . . . . ... . .... ......... . . .... .. . .............................. . . . . . . . . .. .... . . .................. .. .. .. . . .......... ......................................................... . . .. ... .......... . . . . ........... .. ....... . ...... . . . . ...... .. . .. . . . . . . . . ..... . .. .. ....... ... ... . ........ . .. . . . .. . ... . .................. .. . . . . ....... . . .
lowQualScore : 888888 222 2 1 8 0 0 99 0 11111 4 666666666666666666666 4 4 4 0 66 1 4 777777777777 4 9 8 4 44 4 0 11111111111111 0 4 7 1 1 44444444 1 2222 3 11 6 6 6 555555 5 0 111111 6 0 7777 9 2222 3 000 7 1 4 7 6666 0 0 888 333 7 666 11 99 7 9 3333 0 8 55555 0 0 88888 55 0 000 2 44 888 4 1111 4 9 4 9 4 6 4 9 2222 2 3 888 1 1 1 4 9 3 9 6 111 3 111111 000 888888888888888 5 6 0 0 777777 33 9 11 11 9 888 888 4 11 888 7777777777 7 6 66666 0 9 11 0 3 4444 3 88 00 6 000000000000000000000000000000000000 11111 2 222 4 5 0 0 99 0 6666 2 666 4 666 4 4 888888888888888 7 7 99 7 99 7 7 6 444444 3333333333 0 77777 0 8 3 4 222 5 3333 000000000 8 7 1111 99 0 111111111111111111111111111111 7 5 7 7 6 6 6 3 33 6666 7 7 777777777777777777 22 00 22 7 7 5555555555 888888888888888888888888888888888888888888888888888888888 2 2 55 333 2222222222 5 7 0 7 22222222222 00 2222222 5 222222 2 5 2 8 000000 88 0 88 2 2 5 0 0 2 0 0 00000 5 55 88 0000000 000 222 2 33333333 7 33 3 7 0 55 0 222 2 222222222222222222 00 0 0 0 5 8888888 0 0 0
consensus : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-C--G----GAC-AGGAGATGTAACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTAT--ACCGTTGGAAA-GTATTGAATAG----G---T-T--TCAAGAGTAT-CGTCATCCACGAAATCGCG-CAAAGCGTTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACTAT--AG-T-TGTA-CATTT--GGCTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
Reference ( family-1073 ) : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-C--G----GAC-AGGAGATGTAACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTAT--ACCGTTGGAA--GTATTGAATAG----G---T-T--TCAAGAGTAT-CGTCATCCACGAAATCGCG-CAAAGCGTTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACTAT--AG-T-TGTA-CATTT--GGCTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|1 : AAGTGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGATCTTCTGAGCC-CTGACTGA-T-G--ACT-GAGCAAATTTAAGGGTTAAT---GT-CATG----AAC-AGGAGATAATACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGGAAAAGAAAAAG-TCGTAGAAGGCTAGACTCTTGC-GCAGTAT-GGTGGGTGTAGCAAGATGATACCCT--TC--AA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTTACATA-G---A-TGTAGTTTA-TGCT-A--T-TCTCAA-GAGCTTTTT-TAGT---GTAGCATTATTGGTAATACC-GACC-GTAAC----A-CTT-TTGTCC---TAT--AGCATGCGGAAATTTGTAACG--G-CCATACCAT-CATCATTAAG-AGAGGG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TATGG-ATCT---TTTGG-CAA----TAC-AGGTCTTC-TA-TG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTTACTTATTGGTTCAAAATAGT-A-ACCC-A-TG-TTCGTCA-CAGCAACAA-TGTTCGCAAATTGTCTT-TAATTG-AATATAGGAAAACATC-TTC-GA--AAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTATTT-GGTCAATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTTG--TACTT-TCATA-AAT---AC-GCTTCAAAAT--GAAAT---GCACACCAAGA-AGCGATTTACCAA---C-AGCTT-TAGCA-TTATC-ACGAATCATGA--GATCTGCTATACA-ATTT--CAATT-ATTTTCC--------CCGA---T------CC------T-----TT-----TGCTTTGCCTGCTACA---GTC-A-AGGTCCATC-AAA-TTTTATCCGGC-ATCTTCGACGGACTCC----GTGCCAGTCAGAAATTTCTTTCT-CA-C-T-ATGAACTG-TTCCA---------------GA-C-CATTATAATCT-CCCAA-T--AAGTGAATCA--TCTGCATTA-CCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-AT--TATCTATAGCT-----ACATTCTC-ACAG-GGTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCAACTGGCTCTATCGCGAAATGACTTAATATTAAGTTTAAAATTATGTGGAACTGTAAGGCT----CATGTTTA---AT--TT------GTTTTGGA------------------AAG----------ATCCATGAAATGGCG-CAAAGCATTATCACGCTGTGG-TACAATACA-CATTAC-ATATCCAATA-----TCGCA----CG-TTGTTATAAACTATC-AGTT-TGTA-CATTT--GGCGTAAT--GCTGATGACGAG-AG-CTAGATCT-G----CC--AGACT--TA---------G---A-----TG-------G---TGG-TA-------CA------GAGGGGATTGAAT-TGAAT--TG----------GACAAGT-GGTGCTAT-TGTGC--CCAA-G--GGAACAGTTATTTGACG--ATTAGATCA---CTAGGTTCGTTATCTTTTG--CCTTATACA-TACTGTGTTGCTTCTGGTGATGATCAGGGAAAAT-GGAACTAATGAGAGTGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-GTA-ATATTT--GATGA-TCATGATCACATTCAG-TTGAAGCGCGT--TAATGCTCAAATTTATGCTAAATTTG-TT-GTTTACATAC----AT-----TCA----TTAATTTGGA-AAC-ATATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|10 : gACTTCT-CGCAATT--AAGTAAA-CA---CTGCATTT-CTGAATCACTGAGCTTTATGCTAACTT--A------TATAAGCTTT-AA--TT---AGATCT-----ACATTCTC-ACAGCATTTCCTAGCCATTTTCACAA-CAGTGGTCAA-C-GAATGGCTCTAT--CGAAATGACTT-AT-----GTTTAAAACTATGTGGAGCTG-AAGGCT----CGTATTTATTTATTTTT---------TTGAAAAGTAACGCT-T-T--TCAAGATTAT-CATCATCCATGAAATTGCG-CAAAGCGTTTTCGCGCTGTGG-TACAATACA-CATGAC-ATATTCAACAG-CCCTCGTA----CG-TCG-T-TAAA------AG----------TTT--GGCTTAAT--GCTGATGACAAGCAG-CTAGATCC-C----TC--AGACT--TGGAAGGGAATG--AA-----TGGA---AAGT--TGG-TA-------CA------GA-GGGATTGAATATGAA---TG----------GACAAAT-GAAGTTAT-TGTG
gi|11 : CATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGG-----TAA---ACGGACAGAAT-GTCACA-GGAC-----AAAAAG---------T-C--------AC-AGGACATA-AAAG-ACGACCA-GAGAAGAACTGCTTAAGTTTTTGG---------------C---CAAGGCTAGA-TCTGGC-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TCTCCA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ACGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCCA------AATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-GAGCTTTTT-TAGT---ATAGCA-TATTTGTAATACCAGGCCGGTAAC----A-CTT-TTGCCC---TTTTAGGCAT-CGT-AATTTGT-ACA--G-CTATACCAT-CA-CA-TTAG-A-A-GG-TATGCAGTAAAGAA-C-T-T-CATTG--TGC-T---TACGG-AT
gi|12 : TTTTT-CATACTGGTTCAAAATAGT-G-ACCC-AATGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTGGTGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTTTGGTC-ATCTGTCTATATA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TATCTTT--CAATT-ACTT-CC--------CAGAGTTT------TCAAGACAT-----TT-----TGCCTTGCCTGTTACA---ATCAATAGGTCGGCC-AGA-TTTTG--CAGTAATCTTTGACAGACTCT----GTG------AGA---TTCTTTCTCAA-C-TGACGAACTG-TCCCA---------------
gi|13 : aAAATGCATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGA-CTTCTGAGCCACAGACTAA-T-G--ACT-AAAC-----CAAGGGCT--T---GT-C-----------AGGAGATGTAACG-ACGACCA-GAGAAAAACTGCTTAAGTTTT-GGAAAAAGGAAAAAG-TCGTATAAGGCTAGA-ACTGGC-G-AGTAT-GGTGGATGTGGCAAGACGGTACCCTTCTC--CG--ACTTCAAAA-A-------GCA-------------------ATTTGATCGA--GCATT-ATCATA-GAGTAGACGAACAT-ACCTAAAATTTAATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-CAGCTTTTTATAGTATAATAACA-TATCGGTAATACC-GACCGGTAGC----A-CTT-TTGCCC---T
gi|14 : aAAATGCATGCTTAACTTACGTTTCACTCTGATTT-----GGGTAGA-CCTCTGAGCCACTGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-----------C-AGGAAATGTAAAG-ACGACC-AGAGAATATCTGATTAAG--TTTAAGAAAAAGAAAAAT-TCGTATAAGGCTAGC-TCTGGC-G-AGTAC-GGTGAGTGCGGCAAGACGGTACCCTTCTC--AG--ACTTTTAAA-ATTGCTTCACAAG---C----A--------ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTGATATA-G---A-TGCAGTTTA-TGCTAA--TATCTCAA-AAGCTTTTT-TAGT---ATAGCAT
gi|15 : TGGTTCAAAATAGT-G-ACCCCA-TGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTG-TGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTT-GGTC-ATCTGTCTATACA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TA-CTTT--CAATT-ACTTCCCAGAGTTTTCAGA-----------C------A-----TT-----TGCCTTGCCTGTTACA---ATC-ATA
gi|16 : cAAACTGC-G-ATCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCG-CAGTTTGCAAA---TT-TTC-----AATATATATTTGG-CC-A-TCT------TTACGCGGATTCTTTTCT-GATC-ATTTGTCAGCAAA-----TGTGGT-ATCCATCTTGCATTTATC-TTTCGGAGACCT-----A-AAT---GCTTTTTCAAAATTGAAAATATGGTTC-CCGA-----TGATATATCAA---CTAAATT-T-GCA-ATACC-TC---TTGTGGTCAATCACCCAT-CGTCATTAACAATT-TTTT
gi|17 : cCCAA-CCATTTCTACAA-CAGTGGACAA-C-GACTGTCTCTATT-TGAA-TGACT--GTA-TAACTTTAAAACTATGTAGAGCTG-AAGGTT----CGTATTTAT--AACGTTGGAAAGGTATTGAATAG----GGA-TAT--TCAAGAGTACATGT-ATCCACGAAATCGTG-CAAAGCGTTATCGAGCCATGG-TATAATATA-CCTTAC-ATATCAAAtttaaatttgttca
gi|18 : CCA-CCT-ATGAACTGGTCCCA---------------GGCCTCATTAACTTCT-CCCAATT--AAAGAAA-AAAATCTGCATTATCCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A--------ATATCT-----ACATTCTC-ACAGCGTTTTCTA-ACATTTTCAACAACAGTGGTCAACCCGA-TGGCTCTA-T-CGAAATGATT
gi|19 : CATTCGAAAACTTCATTCTTTA-CCT-ACGAACTG-TCTCATAACATACCATATCAGACC-CATAAACTTCAACTTAATTTTCAGTAAA-AA--TCTGCATTA-CCGAATGATTGAGTTTTGTGCTAACTTTTATTCATGTATCA-CTTC-----TA---ATTCCTTATAAATATTCTCGAC-TCGTTTTCTA-aa
gi|2 : CATAGTTT-GCTTCCAGTTGTTTT---TATTGGATCAAA-----------------TTTCGTAACCAGCAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAACCTTT-TTA-AA--AAT---TGCTTAG-CGGA-T-A------GTACTCATACTCGTTTTT-GGTC-TTCTACCAATATA-----TGCGGT-ATGTATCTAGCAGAAATATTTT-G--TACTT-TCA-A-A-C---AT-GCTTCAAAAT--GAAAT---GC--------------------CAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAC-TA-TTTT--CAATT-ATTTCCC---------TGA-----------C------G-----TT-----TGCCTTGCCTGTAACA---GTC-ACAGGACCGCC-AGA-TTTTG--CCAC-ATCTTTGACAGACTCA----GTGCCAGTCAGAAATTTCTTTCTCCA-CCT-ATGAACTG-CCCCA---------------GACC-CATTAATTTCT-CCCAATT--AAATAAA-AA--TCAGTATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-ACGGTA---ATAACT-----ACATTCTC-ACAGCTTTTCTCAGCCATTTTAACAA-CAGTGGTCAA-T-GACTGGCTCTACT--GAAATGACT----A-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----TGTGTTTAT--ACTGTTTGAAAAGTATTGAATAG----AGCTT-T--TCAAGAGTAT-CGTCATCCACCAAATCGTG-CAAAACATTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-TAAACT-------T-TG-N-NNNNN--NNNNNATT--AC--ATATCGAACAGTCCACGTAC-GTCGTTC--AAACT--TT---------GCTGA-----TGAC---AAG---CAGCTAGATCCCCCAGACTTGGAAGGGAGTGGATG-GAAAGTTGGTGCACAGGGGACAAAT-GGCGCTAT-TGTGC--C--ACA--GGAAC--TTATTGac
gi|2 : CTTTGN-NNNNNNNNN-NATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-CAAACT-------------------------T--T--GCTGATGACAAGCAG-CTAGATCC-C----CC--AGACT--TG---------G--AA------------------------------------------GGGA------GTGGA---TG----------GA-AAGTTGGTGC-A---------C--A-G--GGGAC--AAATGGC--GCTATTGTGCCA---C--AG---G--AACTT--A---TT--GACA-TAATATGT-GCTTCTGGTAATGAGCAGGG-AAAT-GGAACTGATGAAGATGGGGATGGAGTGGA-A-A-TGAACAAT-CTGATCGAT-T-AGATATTA--GATGATT-ATGATCAacataatatgtgcttctggtaatgagcagggaaatggaactgatgaagatggggatggagtggaaatgaacaatctgatcgattagatattagatgattatgatcatgatgatgactgatttgataatgctcactttattactgatttg
gi|20 : catagtttgcttccagttgtttttattggatcaaatttcgtaaccagcaacaatgtttgcaaattgtctttgattgaatttaggaaacctttttaaaaattgcttagcggatagtactcatactcgtttttggtcttctaccaatatatgcggtatgtatctagcagaaatattttgtactttcaaacatgcttcaaaatgaaatgccaacagctttggcaatatcacgaatcgtgtatctgccactattttcaattatttccctgacgtttgccttgcctgtaacagtcacaggaccgccagattttgccacatctttgacagactcagtgccagtcagaaatttctttctccacctatgaactgccccagacccattaatttctcccaattaaataaaaatcagtattaccgaatcactgagttttgtgctaacttttatataagctttacggtaataactacattctcacagcttttctcagccattttaacaacagtggtcaatgactggctctactgaaatgactataagtttaaaattatgtggagctgaaggcttgtgtttatactgtttgaaaagtattgaatagagcttttcaagagtatcgtcatccaccaaatcgtgcaaaacattatcgcgctgtggtacaatacacattacatatcgaacagtccacgtacgtcgtttaaa-CA-TGAA-AAG-AA-TATGTAATAAAGAA-C-CGT-CTTTG--TGC-T---GATGA-TTCT---TTTGG-CAA---CTAT-AGGCCTTC-TACTG-TATTTAGTTAGCCATATTAT-GTTTCCAATTTTCT---TTATTGCTTCGAAATAGTAA-ACTC-A-TGTTTTGTCCTCAGCAACGA-TGTTAGTAAATTATCTT-Ttgatgatgactgatttgataatgctcactttattactgatttg
gi|21 : AGAA-C-T-TTCTTTG--TGC-T---C-TGGCATAT---TCTTG-CTA---TTCCTTGACGTTC-C-CCT-TGTTCAGTCACCCACACCTT-G---TCAATTTTTCT-TTGA--GTTTCAAAGTAGT-GTACCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCGCAGTTT
gi|22 : tgcTACCCGTATTT-GGTC-ATCTGTCAATATACCGTATGTGAT-GTGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCAAGATAGCGATATGCCAA---C-AGCTT-CAACA-TTATC-ACGAACCATG---GATCTGCTAT-C
gi|23 : aGTAATTCC-GACCAGTAACGAAAA-CCTGTTACCCGGCTTC--GACAC-CGGAATTATGTACCGCAG-CTATAACA
gi|24 : AATT--CACTAAA-AA--TCTGCATTA-CCGAATGATTAAGTTTTGTACGAACGTTTA------TATAAGCTCTAA---TA---Aataaacggggaggagaatataacaataacaatccttattatagtggagtctatgaaggttcatttg
gi|24 : GACTGGCTTTATT--GAAATGACT----------------ATTA-GTGAAGCTG-AAGGCT----CATGTTTAT--ACTGTTGGAA--gactggctttattgaaatgactattagtgaagctgaaggctcatgtttatactgttggaaa
gi|25 : aattcactaaaaatctgcattaccgaatgattaagttttgtacgaacgtttatataagctctaataaTTTCACTCTGATTTTATTTGGGTAGA-CCTCGGAGCC----ACTGA-TCG--ACT-GAGC-----CA---------------------------AGGAGATGTAACG-ATAACC-AGAGAAGAACTTCTTAAGTTT---------------AG-TCGTGTAAGGCTAGA-TCTGGA-G-AGTAa
gi|26 : AGATG-AAGGCTGAGACGTGTTTAT--ACCGTTAGAA--GC------TA-----------T--TCAACAGTAT-CGTCATCCGCGAAATCGTGCCAAAGCATTATGGCGCTGTGA-TACAATACATTATTAC-ACATCGAACAG-CCCT
gi|27 : CTGCCAT-CA-CTTT--CAATT-ATTTCCC--------TGAA---TTTGGGACA------T-----TA-----T-CCTTGCCTGTTACA---GTA-ACAGGTCGGCC-AGA-TTGTG--CTGC-ATCTTTGATGGACTCT----GTGCCAGCCAGAAATT
gi|28 : AAAGTTATGC-AAATTTG-TTTGTTTACATACTTTAAT-----TAA--TGTTAATTTG-A-AAC-GTATCACT-ACTCAAAACTATATATGC-AAACTTG-TTTAT-TTGCATGAATTGATATTTAct
gi|29 : TG-AAGGCT----CATGTTTAT--ACCATTGGAAAGGTATTGAGTAGA---G---C-TAATCAAGAGTAT-CATCATCCACAAAATTGTG-CACAATATTATTGTGGCGTGG-TACAATACA-CATTAC-c
gi|3 : TGATTT-----GGGTAGA-------AGTTGGAGA-TGA-T-G--A-T-GAGCTATT-TAAGGGCT--TAAAAT-T--GTAATGATAAGGAGATGTAAAG-TC-----AGAG-AGAA-TGATTTAGTTTT--GGAAAAGG--AAAG-T-GTATAAGG-TAG--TATGGT-G-AGT-T-GGTGGGTGTGG-AAGACGATA---T--TT--AA--ATTTAAAAACATTGATT---AAG--TA----AGATGT----TGTG-TGGA--G-ATT-ATAAAA-AAGTAGACGA--AT-GC----------ATG-TGA---A-G---A-TGTAGTGTA-TGA------GTTTAAA-GAGTTTTTTGTATT---ATTAGAATATTGGT-ATA---GA-AGGTAAA----G---T-TTGAAT---TTA--GG----TGG--ATTTGT-ACG--G--TATA---------A-TAAATAGA-GG-TATGTAGT-AAGA----T-T-TTTTG--TG--T---TATGG-A------TTTGG--A------AT-AG---TTA-TATCG-TGTTTAATTAG--ATATTTT-GTT---AAAATTTTT-ATTATTAGTT---AAT-GT-A-A----A-TGTTT--------GTAAAGACTGTTTG-AAATTGTTTT---ATTG-AATATAGGAA---ATT-TT---AGAAAT---TG-TTAG--G-G-T-T------GTA-TAGTA-ATGTATTT-GGT--ATCTGT-AATAT------TGTGGT--TG-A--TGG-AGAAAT-TTTTTG--T--TT-T---A-AAT---AT-GTT---AAAT--GAAAT---GAA-----AGA-AG-GATTTGCAAATATT-AGATTATAG-A-ATAT------ATTGTG---TAT-----AT-TA-ATTT--TAACTGATTT
gi|3 : AGTCAGA---TTTTTT----A---T-ATGAA-TG-T---A---------------GGC---ATTAATTT-------AT----AGTAAA-AA--TATGTA------AGATAATT-AGTTTTGTG-TAA-TTTTA------TATAAGATTA-A---TA---TTATTT-----tgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaagtcagattttttatatgaatgtaggcattaatttatagtaaaaatatgtaagataattagttttgtgtaattttatataagattaatattattt
gi|30 : tgatttgggtagaagttggagatgatgatgagctatttaagggcttaaaattgtaatgataaggagatgtaaagtcagagagaatgatttagttttggaaaaggaaagtgtataaggtagtatggtgagttggtgggtgtggaagacgatatttaaatttaaaaacattgattaagtaagatgttgtgtggagattataaaaaagtagacgaatgcatgtgaagatgtagtgtatgagtttaaagagttttttgtattattagaatattggtatagaaggtaaagtttgaatttaggtggatttgtacggtataataaatagaggtatgtagtaagattttttgtgttatggatttggaatagttatatcgtgtttaattagatattttgttaaaatttttattattagttaatgtaaatgtttgtaaagactgtttgaaattgttttattgaatataggaaattttagaaattgttagggttgtatagtaatgtatttggtatctgtaatattgtggttgatggagaaattttttgttttaaatatgttaaatgaaatgaaagaaggatttgcaaatattagattatagaatatattgtgtatattaattttaactgattttgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaTAAGTTTT-GAAAAAAGGAAAAAGGTTGCATGGGGCGAAA-TTTGGAAG-AGTAT-GATGGGTATGGCAAGACAGTAACCT--TC--AATGACTTCAAAA-ATTGCTTCACACG-CTC----A
gi|31 : ACAAGACTC----AGATGCTCCATGTGGTGGGAGGCATT-ATCATGGAAGTTGACGAACAT-GCCTA------AATCCT-ATTTA-T---A-AATAACTTA-T-AT-A--AATCTT---GAGCTTTTT-T
gi|32 : GTCAT-TGCTTG-AATTTAG-AAAATATT-TTG-GGG-AAT---TGCATAG-TG-AAC-T------GTACTCTTGCCCGTTTTT-GATC-ACCTGTCAATATA-----TCCGGA-ATGCATCAGGCAGAtg
gi|33 : -CA-CA-TTAG-A-A-GG-TATGCAGTAAAGAA-C-C-C-CTTTG--TGC-T---TACGG-ATGT---TTTGG-CAA---TTAC-AGTTCTTC-TATCG-TGTTTATTTAGCCATATTTT-GCTTCCAA
gi|34 : -ATCATG-AAGTAGACGAACAT-GCCTA------AATCCGGACACA-G---G-CATCGTTTA-TGAC-A--TTTCTTA---AGCTTTTT-AAGT---ATAACATC-TCGGTAATACC-GACCTGTA
gi|35 : ATCTGCCAC-CG-CTCT--CGATT-ATTTCCC--------CCGA-----------C------T-----GT-----TGCCTTGCCTGTTACA---GTC-ACA-------------TTTTG--CTGA-ATCTTTGACGGTCTCT----GTGTCAGTCAAA
gi|36 : cT-GCTTCCAATTTTT---CTTATTGG------------A-ACCT-A-TGTTTCGTCACCAGCA-CAA-TGTTTGCAAATTGCCTT-TAATTG-AATTTAGG-AAACAAT-TTC-t
gi|37 : TT-CTTATTGGTTCGAAATCGTGA-ATCC-A-TATATCGTCACCAGTAACGA-TGTTTGCAAATTGTCTT-TGATTa
gi|38 : tga--ACTTCAAAA-ATCGCTTCACAAC-CTCTGTCAGATGT---ATATTGTGGA--GCATT-ATCATG-AAGTAGACGAACAT-G
gi|39 : CGTTATCGCACTGTGG-TACAATACC-CATTAC-CCATCAGACAA-CCCTCGTA----
gi|4 : acGATTT-----AGGTTGA-CTTCCGAGGCACCGACTGA-T-G--GCT-GAGC-----CAAAGGCT--T---GT-C--G----G-----GACTTGTAATG-ACGACCAAA------------TA----TTTGGAAAAA------AG-TTGCATGAGGCTAGA-CCTGGA-G-AGTAT-GGTGGGTGTGGCAAGACGGTA--------------ACCTC-------CG----ACGA--CT--------TG------GTAATGGA--GCATT-ATCATG-AAGTAGACGAGTAT-GCCTA------AATCCTGATACACG---G-CGTCGTTT---GAT-A--TTTCTTGA-GA---TTTT-TAGT---ATAA-AGTCTCGGTGATACC-GACCTGCAAA----A-CTT-TTGACC---TTC--GGCAC-CAGAA-TTTATA-TG--G-CTATACTAT--------------------ATGCAATGAAGAA-CAT-T-CTTTG--TGCATGCGTATGG-TTCT---TTTGG-CAAGTTCTAG-AAGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GTTTCCAATTTTT---CATACCGGTTCGAAATAGTGA-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG--ATTTTGAGAAACATT-TT--GAGCAAT---TGCTTAG-CA-A-T-TTGTATAATACTCATACACGGTTTT-G
gi|4 : ATGTCAA---A-GGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAT-CA-CTTT--CAATT-ATTTCCC---------TGA---C------CT------T-----TTAAACATGGCTTGCCTGA-ACAA--GTC-ACAGATCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACCCT----ATGCCAGTCAGAAAATTCTTTCTCCACC-T-ACGAGTTA-TCTCA---------------tgttgttgtttcgtttgcttgtttgtttgtttcaaatgtcaaaggctttggcaatatcacgaatcgtgtatctgccatcactttcaattatttccctgaccttttaaacatggcttgcctgaacaagtcacagatcggccagattttgctgcatctttgacggaccctatgccagtcagaaaattctttctccacctacgagttatctca
gi|41 : gatttaggttgacttccgaggcaccgactgatggctgagccaaaggcttgtcgggacttgtaatgacgaccaaatatttggaaaaaagttgcatgaggctagacctggagagtatggtgggtgtggcaagacggtaacctccgacgacttggtaatggagcattatcatgaagtagacgagtatgcctaaatcctgatacacggcgtcgtttgatatttcttgagatttttagtataaagtctcggtgataccgacctgcaaaacttttgaccttcggcaccagaatttatatggctatactatatgcaatgaagaacattctttgtgcatgcgtatggttcttttggcaagttctagaagccttctaccgtgtttagttagccatattttgtttccaatttttcataccggttcgaaatagtgaacccatgtttcgtcaccagtaacaatgtttgcaaattgtctttgattgattttgagaaacattttgagcaattgcttagcaatttgtataatactcatacacggttttgtgttgttgtttcgtttgcttgtttgtttgtttcaa-TACAACACA-CATTAC-ATATCGAACAG-CCCTCGTA----
gi|42 : GTAGTTTAATGCT-AG-TATCTCAAAGAGCTTTTT-TGGC---ATAACATttcttccgtgttta
gi|43 : t-T-ATGAATTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAa
gi|5 : -ACCATG-AAGTAGATGAACAT-GCCAA------AATACTGACACA-G---GGTGTTGTTTA-TGGC-AAGTAGTTCTT-GAGCGTTTT-TAAT---ATAACAT-ATCAGTAATACC-GACATGTAAC----A-CTG-TTGCCC---TTC--GGCAC-CGGAA-TTAGTA-CG--G-CTTTACCAT-CA-CA-TGAG--GA-GAATATGCAATAAAGAA-C-----CTTTG--TGC-C---TATGG-TTCT---TTTGG-CAA---CTAC-AGACCTTC-TGCCG-TGTTTAGTTAGCCATATTTT-ATTTCCAA--TTTTT-ATTACTGGTTCGTAATAGTGA-ACGC-A-TGTTTTGTCACCAGTAATAA-TGTTTGCAAAC--CTTT-TGGTTG-AATTT-GGGAAACATG-TT--GAGCAAT---TGTTTGG-T----T-T------GTACTCGTACCCGTTTTT-AGTC-ATC---------------TGTGAT-------------GAAGT----TCG--TACTT-TCA-----------------AAGAT------T---GCTC-CCGCGATAG--------------C-AGTTT-TAGCA-GTATC-A---------------CTACCAT-AA-CGTT--CAATT-ATTTCTC--------TGGC---T------TG------TAGACATT-----TGCCATGCCCGTAACAGTCGTC-ACAGTTCGACT-AGA-TTTTG--CTGC-ATCTTTCACAGACTTTACAGGTGTCAGTCAAAATTTTCTCTCTCCATC-T-ACGAACTG-TCTCA---------------
gi|6 : -CAAAGCATTATCGCGCTGTGGGTACAATACA-CATTACGATATCCAACAGGCCCTCGCAAGCACGGTCGTT-TAAACTATGAAG-T-TGTAACATTTTGGGCTTAATCCGCTGATGACGAACAG-CTAGATTCTG----CCGCAGACT--TA---------G--AAGAGAATGAATGTAAGAGATGG-TA-------CAT-----GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGCCAC--A-G--GAAAC--TTATT----G--ACTAGATCAAGCT--GTTTCGTTATCTTTTAACCTT--TACAGTACTGTGGTGCTTCTGGTGATGAGCAGGG-AAATGGGAACTAATGAAGAAGGGGATGAAATGGATA-ATTGAACAGTCCTGATCAA----A-----TC--AATGA---ATCACCGCATC--AGTCGAAGCGCGTTGTAATGCTCAGAATTATGC-AAATTTGTTT-ATTTACAAAC----ATTCATATAA--T-TTGATTTGGATAACGGTATTACTAACTCAAAATTAT----GCAAAAATTG-TTTATGTTACAAGAATTGATATT
gi|7 : aTGTGG-T-TAATA----ATTA--ATAT-AAAGAG--------A----TG-TGATT-TAAA-TAT--AG-TGTGTA--ATTT--GG-TTAAT--GATGATGA-GAG-AG-CTAGATTA-G----AT--AGAGAGATA---------G--AA-----TGGA---AAG---GGG-TA-------AA------GAGGG--TTGAATA--GA---TG-------------AAGT-GGTG-TATATGTG---C--A-GATGGAA---TTATTAG--A--ATAAGAT-A---T--GGTTAGTTA--TTTAA--ATT--TAAA-T----TGTTGATT-TGGTGATGAGGAAGG-GAAT-GGA--TGATGAAGAAGGGGATG-AGTGGA-ATA-TGAA-AGT--TGAT--ATGG-A-ATATTTTGGATAA-T-ATG-TCA---T--A-TTGAAGAGCGT--T-ATGAT-AAATTTATG--AAATTTG-TT-A-TTAAACAT----AT-----TTAATT-TTGCTTT-GA-AAC-GTATTATT-A---AAAATTAT----G---AAATTGTTTTAT-TT--AAGAATTGATATTT
gi|8 : taattttatataagattaatattatttaggtttataagaattttaaaaagtggtaaagatggttatgaaatgatgaaaaaattgaaaagatatggAAATGCATGCTTAATCTCAGTT--ACTC--GTTT-----GAGTAGC-CGTCTGAGTCACTGACTGA-T-GC-GCTTGAGC-----CAAGGGCT--T---CTTC--GT---GAC-T-----TGTAACGTAAGACCA-GATCAGA-CTTCTTAAGTTTT---GAAAAAAGAAAAG-TTGT-TAAGGCTAGA-ACTGGA-G-AGTATTGGTGGGTATGGCAAGGCGGTGCC-----------------------TC-CTTCACAAG-TTC----AGATGT---ATATGAT-GA--ACATTAATCATA-AAGTAGACAAACATGGCCTA------AATGCTGACACA-GGGCA-AATCGTTTA-TGAT-A--TTTCT--A-GA-----------T---AT-ACA-TATCGATAATACC-AACCGGTAAT----ACCTT-TTCCCC---TTT--GGCAC-CGG--ACTTGTTACG--GCCTATA-CATCCA-TA-TTAG-AAG-GA-TATGCAATAAAGAACC-T-T-CTTTG--TGC-T---TATGG-TTCTGGCGTTGG-CAA---CTAC-A-GCATTC-TACCG-TA-TTATCTAACCATA-TTT-GCCTCCA---TTTTT-CTT
gi|9 : aAGTAAAGAA-C-T-TTCTTTAGTTGT-T---TACTG-ATCT---TTTGGGCAAG--CTAC-AGGTCTTCCTATCGGTGTTTAATTAGCCATATTTTTGCTTCCAATTTTTTC-TTAATTGGTTCAAAATAGT-A-ACCC-A-TGTTTCGTCAACAGCAACAA-TGTTTGCCACTTGTCTT-TAATTG-AATATAGG-AAACATT-TTC-AAGAAAT---TGCTTAGTCGAA-T-T------GT-CTCGTACCCGTATTT-GGTC-A-------------------TGGTAATGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AATAAAAT-GCTTCAAAAT--GAAAT---GCAC-CCAAGA-AGCGATTTGCCA------AGCTT-TTACATCTATCAACGAATCATA---GATCTGCTAT-CA--TTT--CAATT-ATTTCCC--------C-GA-----------C------T-----TT-----TGCATTGCCTGCTACA---GTC-ACCGGTCCATCAAGATTTTTC--CTAA-ATGTTCGACGGACTCC----GTGCCAGTTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|40 ): AGATACTTTATCATACCAATGCTTTGACTAAACTTGCTGAAACTTTGTA
Unaligned ( gi|44 ): GTAACACATAATCTTTTAAAGATTTGATTGTAA
Alignments
lowQualScore : 111111 111 11 22222 666666666666666666666 11 111111111111 22222222222222 11111111 1111 111111 111111 1111 1 1111 111 11 11111 1111 111 222222 222222222222222 111111 11 1111111111 1111 666666666666666666666666666666666666 11111 111 1111 111 222222222222222 111111 3333333333 11111 1 2 222 1111 444444444 1111 1111 1 5555555555555 1111 666666666666666666 2222222222 999999999999999999999999999999999999999999999999999999999 11 111 2222222222 22222222222 11 3333333 222222 222222 11 1 1 1 11111 11 3333333 111 222 22222222 11 11 1 111 333333333333333333 1 1 1 2222222 1 1
lowQualScore : 555555 111 0 5 2 5 5 11 5 33333 1 222222222222222222222 1 0 1 5 55 3 3 999999999999 4 0 0 4 55 4 5 77777777777777 2 4 1 1 1 22222222 1 1111 5 66 3 3 3 111111 0 4 111111 3 1 2222 3 6666 7 777 0 0 4 5 0000 5 5 888 888 5 888 77 77 5 7 9999 5 2 77777 5 4 99999 55 4 777 1 55 777 4 4444 4 1 4 0 4 3 0 0 7777 2 2 222 3 3 3 1 2 3 4 2 999 7 111111 777 000000000000000 0 3 4 1 000000 66 3 22 66 8 999 777 4 66 777 6666666666 5 3 77777 4 3 44 4 2 3333 3 77 55 3 999999999999999999999999999999999999 11111 2 222 4 2 5 5 66 5 0000 0 555 1 999 4 4 777777777777777 6 5 66 5 77 5 0 6 666666 1111111111 1 66666 8 0 3 0 111 2 9999 888888888 0 5 2222 77 0000 5 3 3 2 8888888888888 2 6 2 0 5 3 3 3 2 66 0000 6 6 666666666666666666 99 55 99 6 6 0000000000 666666666666666666666666666666666666666666666666666666666 5 3 11 888 9999999999 2 6 1 6 00000000000 11 2222222 2 999999 3 2 3 9 444444 33 0 55 0 3 2 0 0 3 1 7 22222 2 22 22 0000000 888 333 3 88888888 0 88 7 6 1 22 0 111 1 888888888888888888 55 0 0 0 2 3333333 0 0 7
lowQualScore : ...... ... . . . . . .. . ..... . ..................... . . . . .. . . ............ . . . . .. . . .............. . . . . . ........ . .... . .. . . . ...... . . ...... . . .... . .... . ... . . . . .... . . ... ... . ... .. .. . . .... . . ..... . . ..... .. . ... . .. ... . .... . . . . . . . . .... . . ... . . . . . . . . ... . ...... ... ............... . . . . ...... .. . .. .. . ... ... . .. ... .......... . . ..... . . .. . . .... . .. .. . .................................... ..... . ... . . . . .. . .... . ... . ... . . ............... . . .. . .. . . . ...... .......... . ..... . . . . ... . .... ......... . . .... .. .... . . . . ............. . . . . . . . . . .. .... . . .................. .. .. .. . . .......... ......................................................... . . .. ... .......... . . . . ........... .. ....... . ...... . . . . ...... .. . .. . . . . . . . . ..... . .. .. ....... ... ... . ........ . .. . . . .. . ... . .................. .. . . . . ....... . . .
lowQualScore : 888888 222 2 1 8 0 0 99 0 11111 4 666666666666666666666 4 4 4 0 66 1 4 777777777777 4 9 8 4 44 4 0 11111111111111 0 4 7 1 1 44444444 1 2222 3 11 6 6 6 555555 5 0 111111 6 0 7777 9 2222 3 000 7 1 4 7 6666 0 0 888 333 7 666 11 99 7 9 3333 0 8 55555 0 0 88888 55 0 000 2 44 888 4 1111 4 9 4 9 4 6 4 9 2222 2 3 888 1 1 1 4 9 3 9 6 111 3 111111 000 888888888888888 5 6 0 0 777777 33 9 11 11 9 888 888 4 11 888 7777777777 7 6 66666 0 9 11 0 3 4444 3 88 00 6 000000000000000000000000000000000000 11111 2 222 4 5 0 0 99 0 6666 2 666 4 666 4 4 888888888888888 7 7 99 7 99 7 7 6 444444 3333333333 0 77777 0 8 3 4 222 5 3333 000000000 8 7 1111 99 0000 7 3 5 5 7777777777777 5 7 5 7 7 6 6 6 3 33 6666 7 7 777777777777777777 22 00 22 7 7 5555555555 888888888888888888888888888888888888888888888888888888888 2 2 55 333 2222222222 5 7 0 7 22222222222 00 2222222 5 222222 2 5 2 8 000000 88 0 88 2 2 5 0 0 2 0 0 00000 5 55 88 0000000 000 222 2 33333333 7 33 3 7 0 55 0 222 2 222222222222222222 00 0 0 0 5 8888888 0 0 0
consensus : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-C--G----GAC-AGGAGATGTAACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTA--TA--CCGTT-GGAAAG-TATTGAATAG-G---T-T--TCAAGAGTAT-CGTCATCCACGAAATCGCG-CAAAGCGTTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACTAT--AG-T-TGTA-CATTT--GGCTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
Reference ( family-1073 ) : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-C--G----GAC-AGGAGATGTAACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTA--TA--CCGTT-GGAAAG-TATTGAATAG-G---T-T--TCAAGAGTAT-CGTCATCCACGAAATCGCG-CAAAGCGTTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACTAT--AG-T-TGTA-CATTT--GGCTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|1 : AAGTGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGATCTTCTGAGCC-CTGACTGA-T-G--ACT-GAGCAAATTTAAGGGTTAAT---GT-CATG----AAC-AGGAGATAATACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGGAAAAGAAAAAG-TCGTAGAAGGCTAGACTCTTGC-GCAGTAT-GGTGGGTGTAGCAAGATGATACCCT--TC--AA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTTACATA-G---A-TGTAGTTTA-TGCT-A--T-TCTCAA-GAGCTTTTT-TAGT---GTAGCATTATTGGTAATACC-GACC-GTAAC----A-CTT-TTGTCC---TAT--AGCATGCGGAAATTTGTAACG--G-CCATACCAT-CATCATTAAG-AGAGGG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TATGG-ATCT---TTTGG-CAA----TAC-AGGTCTTC-TA-TG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTTACTTATTGGTTCAAAATAGT-A-ACCC-A-TG-TTCGTCA-CAGCAACAA-TGTTCGCAAATTGTCTT-TAATTG-AATATAGGAAAACATC-TTC-GA--AAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTATTT-GGTCAATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTTG--TACTT-TCATA-AAT---AC-GCTTCAAAAT--GAAAT---GCACACCAAGA-AGCGATTTACCAA---C-AGCTT-TAGCA-TTATC-ACGAATCATGA--GATCTGCTATACA-ATTT--CAATT-ATTTTCC--------CCGA---T------CC------T-----TT-----TGCTTTGCCTGCTACA---GTC-A-AGGTCCATC-AAA-TTTTATCCGGC-ATCTTCGACGGACTCC----GTGCCAGTCAGAAATTTCTTTCT-CA-C-T-ATGAACTG-TTCCA---------------GA-C-CATTATAATCT-CCCAA-T--AAGTGAATCA--TCTGCATTA-CCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-AT--TATCTATAGCT-----ACATTCTC-ACAG-GGTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCAACTGGCTCTATCGCGAAATGACTTAATATTAAGTTTAAAATTATGTGGAACTGTAAGGCT----CATGTTTA---A--T--TT------G-TTTTGGA---------------AAGA----------TCCATGAAATGGCG-CAAAGCATTATCACGCTGTGG-TACAATACA-CATTAC-ATATCCAATA-----TCGCA----CG-TTGTTATAAACTATC-AGTT-TGTA-CATTT--GGCGTAAT--GCTGATGACGAG-AG-CTAGATCT-G----CC--AGACT--TA---------G---A-----TG-------G---TGG-TA-------CA------GAGGGGATTGAAT-TGAAT--TG----------GACAAGT-GGTGCTAT-TGTGC--CCAA-G--GGAACAGTTATTTGACG--ATTAGATCA---CTAGGTTCGTTATCTTTTG--CCTTATACA-TACTGTGTTGCTTCTGGTGATGATCAGGGAAAAT-GGAACTAATGAGAGTGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-GTA-ATATTT--GATGA-TCATGATCACATTCAG-TTGAAGCGCGT--TAATGCTCAAATTTATGCTAAATTTG-TT-GTTTACATAC----AT-----TCA----TTAATTTGGA-AAC-ATATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|10 : gACTTCT-CGCAATT--AAGTAAA-CA---CTGCATTT-CTGAATCACTGAGCTTTATGCTAACTT--A------TATAAGCTTT-AA--TT---AGATCT-----ACATTCTC-ACAGCATTTCCTAGCCATTTTCACAA-CAGTGGTCAA-C-GAATGGCTCTAT--CGAAATGACTT-AT-----GTTTAAAACTATGTGGAGCTG-AAGGCT----CGTATTTATTTATTTTTTT-GAAAAG-T----AACGC-T---T-T--TCAAGATTAT-CATCATCCATGAAATTGCG-CAAAGCGTTTTCGCGCTGTGG-TACAATACA-CATGAC-ATATTCAACAG-CCCTCGTA----CG-TCG-T-TAAA------AG----------TTT--GGCTTAAT--GCTGATGACAAGCAG-CTAGATCC-C----TC--AGACT--TGGAAGGGAATG--AA-----TGGA---AAGT--TGG-TA-------CA------GA-GGGATTGAATATGAA---TG----------GACAAAT-GAAGTTAT-TGTG
gi|11 : CATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGG-----TAA---ACGGACAGAAT-GTCACA-GGAC-----AAAAAG---------T-C--------AC-AGGACATA-AAAG-ACGACCA-GAGAAGAACTGCTTAAGTTTTTGG---------------C---CAAGGCTAGA-TCTGGC-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TCTCCA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ACGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCCA------AATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-GAGCTTTTT-TAGT---ATAGCA-TATTTGTAATACCAGGCCGGTAAC----A-CTT-TTGCCC---TTTTAGGCAT-CGT-AATTTGT-ACA--G-CTATACCAT-CA-CA-TTAG-A-A-GG-TATGCAGTAAAGAA-C-T-T-CATTG--TGC-T---TACGG-AT
gi|12 : TTTTT-CATACTGGTTCAAAATAGT-G-ACCC-AATGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTGGTGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTTTGGTC-ATCTGTCTATATA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TATCTTT--CAATT-ACTT-CC--------CAGAGTTT------TCAAGACAT-----TT-----TGCCTTGCCTGTTACA---ATCAATAGGTCGGCC-AGA-TTTTG--CAGTAATCTTTGACAGACTCT----GTG------AGA---TTCTTTCTCAA-C-TGACGAACTG-TCCCA---------------
gi|13 : aAAATGCATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGA-CTTCTGAGCCACAGACTAA-T-G--ACT-AAAC-----CAAGGGCT--T---GT-C-----------AGGAGATGTAACG-ACGACCA-GAGAAAAACTGCTTAAGTTTT-GGAAAAAGGAAAAAG-TCGTATAAGGCTAGA-ACTGGC-G-AGTAT-GGTGGATGTGGCAAGACGGTACCCTTCTC--CG--ACTTCAAAA-A-------GCA-------------------ATTTGATCGA--GCATT-ATCATA-GAGTAGACGAACAT-ACCTAAAATTTAATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-CAGCTTTTTATAGTATAATAACA-TATCGGTAATACC-GACCGGTAGC----A-CTT-TTGCCC---T
gi|14 : aAAATGCATGCTTAACTTACGTTTCACTCTGATTT-----GGGTAGA-CCTCTGAGCCACTGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-----------C-AGGAAATGTAAAG-ACGACC-AGAGAATATCTGATTAAG--TTTAAGAAAAAGAAAAAT-TCGTATAAGGCTAGC-TCTGGC-G-AGTAC-GGTGAGTGCGGCAAGACGGTACCCTTCTC--AG--ACTTTTAAA-ATTGCTTCACAAG---C----A--------ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTGATATA-G---A-TGCAGTTTA-TGCTAA--TATCTCAA-AAGCTTTTT-TAGT---ATAGCAT
gi|15 : TGGTTCAAAATAGT-G-ACCCCA-TGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTG-TGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTT-GGTC-ATCTGTCTATACA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TA-CTTT--CAATT-ACTTCCCAGAGTTTTCAGA-----------C------A-----TT-----TGCCTTGCCTGTTACA---ATC-ATA
gi|16 : cAAACTGC-G-ATCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCG-CAGTTTGCAAA---TT-TTC-----AATATATATTTGG-CC-A-TCT------TTACGCGGATTCTTTTCT-GATC-ATTTGTCAGCAAA-----TGTGGT-ATCCATCTTGCATTTATC-TTTCGGAGACCT-----A-AAT---GCTTTTTCAAAATTGAAAATATGGTTC-CCGA-----TGATATATCAA---CTAAATT-T-GCA-ATACC-TC---TTGTGGTCAATCACCCAT-CGTCATTAACAATT-TTTT
gi|17 : cCCAA-CCATTTCTACAA-CAGTGGACAA-C-GACTGTCTCTATT-TGAA-TGACT--GTA-TAACTTTAAAACTATGTAGAGCTG-AAGGTT----CGTATTTA--TA--ACGTT-GGAAAGGTATTGAATAG-GGA-TAT--TCAAGAGTACATGT-ATCCACGAAATCGTG-CAAAGCGTTATCGAGCCATGG-TATAATATA-CCTTAC-ATATCAAAtttaaatttgttca
gi|18 : CCA-CCT-ATGAACTGGTCCCA---------------GGCCTCATTAACTTCT-CCCAATT--AAAGAAA-AAAATCTGCATTATCCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A--------ATATCT-----ACATTCTC-ACAGCGTTTTCTA-ACATTTTCAACAACAGTGGTCAACCCGA-TGGCTCTA-T-CGAAATGATT
gi|19 : CATTCGAAAACTTCATTCTTTA-CCT-ACGAACTG-TCTCATAACATACCATATCAGACC-CATAAACTTCAACTTAATTTTCAGTAAA-AA--TCTGCATTA-CCGAATGATTGAGTTTTGTGCTAACTTTTATTCATGTATCA-CTTC-----TA---ATTCCTTATAAATATTCTCGAC-TCGTTTTCTA-aa
gi|2 : CATAGTTT-GCTTCCAGTTGTTTT---TATTGGATCAAA-----------------TTTCGTAACCAGCAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAACCTTT-TTA-AA--AAT---TGCTTAG-CGGA-T-A------GTACTCATACTCGTTTTT-GGTC-TTCTACCAATATA-----TGCGGT-ATGTATCTAGCAGAAATATTTT-G--TACTT-TCA-A-A-C---AT-GCTTCAAAAT--GAAAT---GC--------------------CAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAC-TA-TTTT--CAATT-ATTTCCC---------TGA-----------C------G-----TT-----TGCCTTGCCTGTAACA---GTC-ACAGGACCGCC-AGA-TTTTG--CCAC-ATCTTTGACAGACTCA----GTGCCAGTCAGAAATTTCTTTCTCCA-CCT-ATGAACTG-CCCCA---------------GACC-CATTAATTTCT-CCCAATT--AAATAAA-AA--TCAGTATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-ACGGTA---ATAACT-----ACATTCTC-ACAGCTTTTCTCAGCCATTTTAACAA-CAGTGGTCAA-T-GACTGGCTCTACT--GAAATGACT----A-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----TGTGTTTA--TA--CTGTTTGAAAAG-TATTGAATAG-AGCTT-T--TCAAGAGTAT-CGTCATCCACCAAATCGTG-CAAAACATTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-TAAACT-------T-TG-N-NNNNN--NNNNNATT--AC--ATATCGAACAGTCCACGTAC-GTCGTTC--AAACT--TT---------GCTGA-----TGAC---AAG---CAGCTAGATCCCCCAGACTTGGAAGGGAGTGGATG-GAAAGTTGGTGCACAGGGGACAAAT-GGCGCTAT-TGTGC--C--ACA--GGAAC--TTATTGac
gi|2 : CTTTGN-NNNNNNNNN-NATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-CAAACT-------------------------T--T--GCTGATGACAAGCAG-CTAGATCC-C----CC--AGACT--TG---------G--AA------------------------------------------GGGA------GTGGA---TG----------GA-AAGTTGGTGC-A---------C--A-G--GGGAC--AAATGGC--GCTATTGTGCCA---C--AG---G--AACTT--A---TT--GACA-TAATATGT-GCTTCTGGTAATGAGCAGGG-AAAT-GGAACTGATGAAGATGGGGATGGAGTGGA-A-A-TGAACAAT-CTGATCGAT-T-AGATATTA--GATGATT-ATGATCAacataatatgtgcttctggtaatgagcagggaaatggaactgatgaagatggggatggagtggaaatgaacaatctgatcgattagatattagatgattatgatcatgatgatgactgatttgataatgctcactttattactgatttg
gi|20 : catagtttgcttccagttgtttttattggatcaaatttcgtaaccagcaacaatgtttgcaaattgtctttgattgaatttaggaaacctttttaaaaattgcttagcggatagtactcatactcgtttttggtcttctaccaatatatgcggtatgtatctagcagaaatattttgtactttcaaacatgcttcaaaatgaaatgccaacagctttggcaatatcacgaatcgtgtatctgccactattttcaattatttccctgacgtttgccttgcctgtaacagtcacaggaccgccagattttgccacatctttgacagactcagtgccagtcagaaatttctttctccacctatgaactgccccagacccattaatttctcccaattaaataaaaatcagtattaccgaatcactgagttttgtgctaacttttatataagctttacggtaataactacattctcacagcttttctcagccattttaacaacagtggtcaatgactggctctactgaaatgactataagtttaaaattatgtggagctgaaggcttgtgtttatactgtttgaaaagtattgaatagagcttttcaagagtatcgtcatccaccaaatcgtgcaaaacattatcgcgctgtggtacaatacacattacatatcgaacagtccacgtacgtcgtttaaa-CA-TGAA-AAG-AA-TATGTAATAAAGAA-C-CGT-CTTTG--TGC-T---GATGA-TTCT---TTTGG-CAA---CTAT-AGGCCTTC-TACTG-TATTTAGTTAGCCATATTAT-GTTTCCAATTTTCT---TTATTGCTTCGAAATAGTAA-ACTC-A-TGTTTTGTCCTCAGCAACGA-TGTTAGTAAATTATCTT-Ttgatgatgactgatttgataatgctcactttattactgatttg
gi|21 : AGAA-C-T-TTCTTTG--TGC-T---C-TGGCATAT---TCTTG-CTA---TTCCTTGACGTTC-C-CCT-TGTTCAGTCACCCACACCTT-G---TCAATTTTTCT-TTGA--GTTTCAAAGTAGT-GTACCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCGCAGTTT
gi|22 : tgcTACCCGTATTT-GGTC-ATCTGTCAATATACCGTATGTGAT-GTGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCAAGATAGCGATATGCCAA---C-AGCTT-CAACA-TTATC-ACGAACCATG---GATCTGCTAT-C
gi|23 : aGTAATTCC-GACCAGTAACGAAAA-CCTGTTACCCGGCTTC--GACAC-CGGAATTATGTACCGCAG-CTATAACA
gi|24 : AATT--CACTAAA-AA--TCTGCATTA-CCGAATGATTAAGTTTTGTACGAACGTTTA------TATAAGCTCTAA---TA---Aataaacggggaggagaatataacaataacaatccttattatagtggagtctatgaaggttcatttg
gi|24 : GACTGGCTTTATT--GAAATGACT----------------ATTA-GTGAAGCTG-AAGGCT----CATGTTTA--TA--CTGTT-GGAAAgactggctttattgaaatgactattagtgaagctgaaggctcatgtttatactgttggaaa
gi|25 : aattcactaaaaatctgcattaccgaatgattaagttttgtacgaacgtttatataagctctaataaTTTCACTCTGATTTTATTTGGGTAGA-CCTCGGAGCC----ACTGA-TCG--ACT-GAGC-----CA---------------------------AGGAGATGTAACG-ATAACC-AGAGAAGAACTTCTTAAGTTT---------------AG-TCGTGTAAGGCTAGA-TCTGGA-G-AGTA
gi|26 : AGATG-AAGGCTGAGACGTGTTTA--TA--CCGTT-AGAAGC-TATT-----------------CAACAGTAT-CGTCATCCGCGAAATCGTGCCAAAGCATTATGGCGCTGTGA-TACAATACATTATTAC-ACATCGAACAG-CCCT
gi|27 : CTGCCAT-CA-CTTT--CAATT-ATTTCCC--------TGAA---TTTGGGACA------T-----TA-----T-CCTTGCCTGTTACA---GTA-ACAGGTCGGCC-AGA-TTGTG--CTGC-ATCTTTGATGGACTCT----GTGCCAGCCAGAAATT
gi|28 : AAAGTTATGC-AAATTTG-TTTGTTTACATACTTTAAT-----TAA--TGTTAATTTG-A-AAC-GTATCACT-ACTCAAAACTATATATGC-AAACTTG-TTTAT-TTGCATGAATTGATATTTAct
gi|29 : TG-AAGGCT----CATGTTTA--TA--CCATT-GGAAAGGTATTGAGTAGAG---C-TAATCAAGAGTAT-CATCATCCACAAAATTGTG-CACAATATTATTGTGGCGTGG-TACAATACA-CATTAC-c
gi|3 : TGATTT-----GGGTAGA-------AGTTGGAGA-TGA-T-G--A-T-GAGCTATT-TAAGGGCT--TAAAAT-T--GTAATGATAAGGAGATGTAAAG-TC-----AGAG-AGAA-TGATTTAGTTTT--GGAAAAGG--AAAG-T-GTATAAGG-TAG--TATGGT-G-AGT-T-GGTGGGTGTGG-AAGACGATA---T--TT--AA--ATTTAAAAACATTGATT---AAG--TA----AGATGT----TGTG-TGGA--G-ATT-ATAAAA-AAGTAGACGA--AT-GC----------ATG-TGA---A-G---A-TGTAGTGTA-TGA------GTTTAAA-GAGTTTTTTGTATT---ATTAGAATATTGGT-ATA---GA-AGGTAAA----G---T-TTGAAT---TTA--GG----TGG--ATTTGT-ACG--G--TATA---------A-TAAATAGA-GG-TATGTAGT-AAGA----T-T-TTTTG--TG--T---TATGG-A------TTTGG--A------AT-AG---TTA-TATCG-TGTTTAATTAG--ATATTTT-GTT---AAAATTTTT-ATTATTAGTT---AAT-GT-A-A----A-TGTTT--------GTAAAGACTGTTTG-AAATTGTTTT---ATTG-AATATAGGAA---ATT-TT---AGAAAT---TG-TTAG--G-G-T-T------GTA-TAGTA-ATGTATTT-GGT--ATCTGT-AATAT------TGTGGT--TG-A--TGG-AGAAAT-TTTTTG--T--TT-T---A-AAT---AT-GTT---AAAT--GAAAT---GAA-----AGA-AG-GATTTGCAAATATT-AGATTATAG-A-ATAT------ATTGTG---TAT-----AT-TA-ATTT--TAACTGATTT
gi|3 : AGTCAGA---TTTTTT----A---T-ATGAA-TG-T---A---------------GGC---ATTAATTT-------AT----AGTAAA-AA--TATGTA------AGATAATT-AGTTTTGTG-TAA-TTTTA------TATAAGATTA-A---TA---TTATTT-----tgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaagtcagattttttatatgaatgtaggcattaatttatagtaaaaatatgtaagataattagttttgtgtaattttatataagattaatattattt
gi|30 : tgatttgggtagaagttggagatgatgatgagctatttaagggcttaaaattgtaatgataaggagatgtaaagtcagagagaatgatttagttttggaaaaggaaagtgtataaggtagtatggtgagttggtgggtgtggaagacgatatttaaatttaaaaacattgattaagtaagatgttgtgtggagattataaaaaagtagacgaatgcatgtgaagatgtagtgtatgagtttaaagagttttttgtattattagaatattggtatagaaggtaaagtttgaatttaggtggatttgtacggtataataaatagaggtatgtagtaagattttttgtgttatggatttggaatagttatatcgtgtttaattagatattttgttaaaatttttattattagttaatgtaaatgtttgtaaagactgtttgaaattgttttattgaatataggaaattttagaaattgttagggttgtatagtaatgtatttggtatctgtaatattgtggttgatggagaaattttttgttttaaatatgttaaatgaaatgaaagaaggatttgcaaatattagattatagaatatattgtgtatattaattttaactgattttgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaTAAGTTTT-GAAAAAAGGAAAAAGGTTGCATGGGGCGAAA-TTTGGAAG-AGTAT-GATGGGTATGGCAAGACAGTAACCT--TC--AATGACTTCAAAA-ATTGCTTCACACG-CTC----A
gi|31 : ACAAGACTC----AGATGCTCCATGTGGTGGGAGGCATT-ATCATGGAAGTTGACGAACAT-GCCTA------AATCCT-ATTTA-T---A-AATAACTTA-T-AT-A--AATCTT---GAGCTTTTT-T
gi|32 : GTCAT-TGCTTG-AATTTAG-AAAATATT-TTG-GGG-AAT---TGCATAG-TG-AAC-T------GTACTCTTGCCCGTTTTT-GATC-ACCTGTCAATATA-----TCCGGA-ATGCATCAGGCAGAtg
gi|33 : -CA-CA-TTAG-A-A-GG-TATGCAGTAAAGAA-C-C-C-CTTTG--TGC-T---TACGG-ATGT---TTTGG-CAA---TTAC-AGTTCTTC-TATCG-TGTTTATTTAGCCATATTTT-GCTTCCAA
gi|34 : -ATCATG-AAGTAGACGAACAT-GCCTA------AATCCGGACACA-G---G-CATCGTTTA-TGAC-A--TTTCTTA---AGCTTTTT-AAGT---ATAACATC-TCGGTAATACC-GACCTGTA
gi|35 : ATCTGCCAC-CG-CTCT--CGATT-ATTTCCC--------CCGA-----------C------T-----GT-----TGCCTTGCCTGTTACA---GTC-ACA-------------TTTTG--CTGA-ATCTTTGACGGTCTCT----GTGTCAGTCAAA
gi|36 : cT-GCTTCCAATTTTT---CTTATTGG------------A-ACCT-A-TGTTTCGTCACCAGCA-CAA-TGTTTGCAAATTGCCTT-TAATTG-AATTTAGG-AAACAAT-TTC-t
gi|37 : TT-CTTATTGGTTCGAAATCGTGA-ATCC-A-TATATCGTCACCAGTAACGA-TGTTTGCAAATTGTCTT-TGATTa
gi|38 : tga--ACTTCAAAA-ATCGCTTCACAAC-CTCTGTCAGATGT---ATATTGTGGA--GCATT-ATCATG-AAGTAGACGAACAT-G
gi|39 : CGTTATCGCACTGTGG-TACAATACC-CATTAC-CCATCAGACAA-CCCTCGTA----
gi|4 : acGATTT-----AGGTTGA-CTTCCGAGGCACCGACTGA-T-G--GCT-GAGC-----CAAAGGCT--T---GT-C--G----G-----GACTTGTAATG-ACGACCAAA------------TA----TTTGGAAAAA------AG-TTGCATGAGGCTAGA-CCTGGA-G-AGTAT-GGTGGGTGTGGCAAGACGGTA--------------ACCTC-------CG----ACGA--CT--------TG------GTAATGGA--GCATT-ATCATG-AAGTAGACGAGTAT-GCCTA------AATCCTGATACACG---G-CGTCGTTT---GAT-A--TTTCTTGA-GA---TTTT-TAGT---ATAA-AGTCTCGGTGATACC-GACCTGCAAA----A-CTT-TTGACC---TTC--GGCAC-CAGAA-TTTATA-TG--G-CTATACTAT--------------------ATGCAATGAAGAA-CAT-T-CTTTG--TGCATGCGTATGG-TTCT---TTTGG-CAAGTTCTAG-AAGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GTTTCCAATTTTT---CATACCGGTTCGAAATAGTGA-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG--ATTTTGAGAAACATT-TT--GAGCAAT---TGCTTAG-CA-A-T-TTGTATAATACTCATACACGGTTTT-G
gi|4 : ATGTCAA---A-GGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAT-CA-CTTT--CAATT-ATTTCCC---------TGA---C------CT------T-----TTAAACATGGCTTGCCTGA-ACAA--GTC-ACAGATCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACCCT----ATGCCAGTCAGAAAATTCTTTCTCCACC-T-ACGAGTTA-TCTCA---------------tgttgttgtttcgtttgcttgtttgtttgtttcaaatgtcaaaggctttggcaatatcacgaatcgtgtatctgccatcactttcaattatttccctgaccttttaaacatggcttgcctgaacaagtcacagatcggccagattttgctgcatctttgacggaccctatgccagtcagaaaattctttctccacctacgagttatctca
gi|41 : gatttaggttgacttccgaggcaccgactgatggctgagccaaaggcttgtcgggacttgtaatgacgaccaaatatttggaaaaaagttgcatgaggctagacctggagagtatggtgggtgtggcaagacggtaacctccgacgacttggtaatggagcattatcatgaagtagacgagtatgcctaaatcctgatacacggcgtcgtttgatatttcttgagatttttagtataaagtctcggtgataccgacctgcaaaacttttgaccttcggcaccagaatttatatggctatactatatgcaatgaagaacattctttgtgcatgcgtatggttcttttggcaagttctagaagccttctaccgtgtttagttagccatattttgtttccaatttttcataccggttcgaaatagtgaacccatgtttcgtcaccagtaacaatgtttgcaaattgtctttgattgattttgagaaacattttgagcaattgcttagcaatttgtataatactcatacacggttttgtgttgttgtttcgtttgcttgtttgtttgtttcaa-TACAACACA-CATTAC-ATATCGAACAG-CCCTCGTA----
gi|42 : GTAGTTTAATGCT-AG-TATCTCAAAGAGCTTTTT-TGGC---ATAACATttcttccgtgttta
gi|43 : t-T-ATGAATTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAa
gi|5 : -ACCATG-AAGTAGATGAACAT-GCCAA------AATACTGACACA-G---GGTGTTGTTTA-TGGC-AAGTAGTTCTT-GAGCGTTTT-TAAT---ATAACAT-ATCAGTAATACC-GACATGTAAC----A-CTG-TTGCCC---TTC--GGCAC-CGGAA-TTAGTA-CG--G-CTTTACCAT-CA-CA-TGAG--GA-GAATATGCAATAAAGAA-C-----CTTTG--TGC-C---TATGG-TTCT---TTTGG-CAA---CTAC-AGACCTTC-TGCCG-TGTTTAGTTAGCCATATTTT-ATTTCCAA--TTTTT-ATTACTGGTTCGTAATAGTGA-ACGC-A-TGTTTTGTCACCAGTAATAA-TGTTTGCAAAC--CTTT-TGGTTG-AATTT-GGGAAACATG-TT--GAGCAAT---TGTTTGG-T----T-T------GTACTCGTACCCGTTTTT-AGTC-ATC---------------TGTGAT-------------GAAGT----TCG--TACTT-TCA-----------------AAGAT------T---GCTC-CCGCGATAG--------------C-AGTTT-TAGCA-GTATC-A---------------CTACCAT-AA-CGTT--CAATT-ATTTCTC--------TGGC---T------TG------TAGACATT-----TGCCATGCCCGTAACAGTCGTC-ACAGTTCGACT-AGA-TTTTG--CTGC-ATCTTTCACAGACTTTACAGGTGTCAGTCAAAATTTTCTCTCTCCATC-T-ACGAACTG-TCTCA---------------
gi|6 : -CAAAGCATTATCGCGCTGTGGGTACAATACA-CATTACGATATCCAACAGGCCCTCGCAAGCACGGTCGTT-TAAACTATGAAG-T-TGTAACATTTTGGGCTTAATCCGCTGATGACGAACAG-CTAGATTCTG----CCGCAGACT--TA---------G--AAGAGAATGAATGTAAGAGATGG-TA-------CAT-----GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGCCAC--A-G--GAAAC--TTATT----G--ACTAGATCAAGCT--GTTTCGTTATCTTTTAACCTT--TACAGTACTGTGGTGCTTCTGGTGATGAGCAGGG-AAATGGGAACTAATGAAGAAGGGGATGAAATGGATA-ATTGAACAGTCCTGATCAA----A-----TC--AATGA---ATCACCGCATC--AGTCGAAGCGCGTTGTAATGCTCAGAATTATGC-AAATTTGTTT-ATTTACAAAC----ATTCATATAA--T-TTGATTTGGATAACGGTATTACTAACTCAAAATTAT----GCAAAAATTG-TTTATGTTACAAGAATTGATATT
gi|7 : aTGTGG-T-TAATA----ATTA--ATAT-AAAGAG--------A----TG-TGATT-TAAA-TAT--AG-TGTGTA--ATTT--GG-TTAAT--GATGATGA-GAG-AG-CTAGATTA-G----AT--AGAGAGATA---------G--AA-----TGGA---AAG---GGG-TA-------AA------GAGGG--TTGAATA--GA---TG-------------AAGT-GGTG-TATATGTG---C--A-GATGGAA---TTATTAG--A--ATAAGAT-A---T--GGTTAGTTA--TTTAA--ATT--TAAA-T----TGTTGATT-TGGTGATGAGGAAGG-GAAT-GGA--TGATGAAGAAGGGGATG-AGTGGA-ATA-TGAA-AGT--TGAT--ATGG-A-ATATTTTGGATAA-T-ATG-TCA---T--A-TTGAAGAGCGT--T-ATGAT-AAATTTATG--AAATTTG-TT-A-TTAAACAT----AT-----TTAATT-TTGCTTT-GA-AAC-GTATTATT-A---AAAATTAT----G---AAATTGTTTTAT-TT--AAGAATTGATATTT
gi|8 : taattttatataagattaatattatttaggtttataagaattttaaaaagtggtaaagatggttatgaaatgatgaaaaaattgaaaagatatggAAATGCATGCTTAATCTCAGTT--ACTC--GTTT-----GAGTAGC-CGTCTGAGTCACTGACTGA-T-GC-GCTTGAGC-----CAAGGGCT--T---CTTC--GT---GAC-T-----TGTAACGTAAGACCA-GATCAGA-CTTCTTAAGTTTT---GAAAAAAGAAAAG-TTGT-TAAGGCTAGA-ACTGGA-G-AGTATTGGTGGGTATGGCAAGGCGGTGCC-----------------------TC-CTTCACAAG-TTC----AGATGT---ATATGAT-GA--ACATTAATCATA-AAGTAGACAAACATGGCCTA------AATGCTGACACA-GGGCA-AATCGTTTA-TGAT-A--TTTCT--A-GA-----------T---AT-ACA-TATCGATAATACC-AACCGGTAAT----ACCTT-TTCCCC---TTT--GGCAC-CGG--ACTTGTTACG--GCCTATA-CATCCA-TA-TTAG-AAG-GA-TATGCAATAAAGAACC-T-T-CTTTG--TGC-T---TATGG-TTCTGGCGTTGG-CAA---CTAC-A-GCATTC-TACCG-TA-TTATCTAACCATA-TTT-GCCTCCA---TTTTT-CTT
gi|9 : aAGTAAAGAA-C-T-TTCTTTAGTTGT-T---TACTG-ATCT---TTTGGGCAAG--CTAC-AGGTCTTCCTATCGGTGTTTAATTAGCCATATTTTTGCTTCCAATTTTTTC-TTAATTGGTTCAAAATAGT-A-ACCC-A-TGTTTCGTCAACAGCAACAA-TGTTTGCCACTTGTCTT-TAATTG-AATATAGG-AAACATT-TTC-AAGAAAT---TGCTTAGTCGAA-T-T------GT-CTCGTACCCGTATTT-GGTC-A-------------------TGGTAATGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AATAAAAT-GCTTCAAAAT--GAAAT---GCAC-CCAAGA-AGCGATTTGCCA------AGCTT-TTACATCTATCAACGAATCATA---GATCTGCTAT-CA--TTT--CAATT-ATTTCCC--------C-GA-----------C------T-----TT-----TGCATTGCCTGCTACA---GTC-ACCGGTCCATCAAGATTTTTC--CTAA-ATGTTCGACGGACTCC----GTGCCAGTTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|40 ): AGATACTTTATCATACCAATGCTTTGACTAAACTTGCTGAAACTTTGTA
Unaligned ( gi|44 ): GTAACACATAATCTTTTAAAGATTTGATTGTAA
Alignments
lowQualScore : 111111 111 11 22222 666666666666666666666 11 111111111111 22222222222222 11111111 1111 111111 111111 1111 1 1111 111 11 11111 1111 111 222222 222222222222222 111111 11 1111111111 1111 666666666666666666666666666666666666 11111 111 1111 111 222222222222222 111111 3333333333 11111 1 2 222 1111 444444444 1111 1111 1 5555555555555 1111 666666666666666666 2222222222 999999999999999999999999999999999999999999999999999999999 11 111 2222222222 22222222222 11 3333333 222222 222222 11 1 1 1 11111 11 3333333 111 222 22222222 11 11 1 111 333333333333333333 1 1 1 2222222 1 1
lowQualScore : 555555 111 0 5 2 5 5 11 5 33333 1 222222222222222222222 1 0 1 5 55 3 3 999999999999 4 0 0 4 55 4 5 77777777777777 2 4 1 1 1 22222222 1 1111 5 66 3 3 3 111111 0 4 111111 3 1 2222 3 6666 7 777 0 0 4 5 0000 5 5 888 888 5 888 77 77 5 7 9999 5 2 77777 5 4 99999 55 4 777 1 55 777 4 4444 4 1 4 0 4 3 0 0 7777 2 2 222 3 3 3 1 2 3 4 2 999 7 111111 777 000000000000000 0 3 4 1 000000 66 3 22 66 8 999 777 4 66 777 6666666666 5 3 77777 4 3 44 4 2 3333 3 77 55 3 999999999999999999999999999999999999 11111 2 222 4 2 5 5 66 5 0000 0 555 1 999 4 4 777777777777777 6 5 66 5 77 5 0 6 666666 1111111111 1 66666 8 0 3 0 111 2 9999 888888888 0 5 2222 77 0000 5 3 3 2 8888888888888 2 6 2 0 5 3 3 3 2 66 0000 6 6 666666666666666666 99 55 99 6 6 0000000000 666666666666666666666666666666666666666666666666666666666 5 3 11 888 9999999999 2 6 1 6 00000000000 11 2222222 2 999999 3 2 3 9 444444 33 0 55 0 3 2 0 0 3 1 7 22222 2 22 22 0000000 888 333 3 88888888 0 88 7 6 1 22 0 111 1 888888888888888888 55 0 0 0 2 3333333 0 0 7
lowQualScore : ...... ... . . . . . .. . ..... . ..................... . . . . .. . . ............ . . . . .. . . .............. . . . . . ........ . .... . .. . . . ...... . . ...... . . .... . .... . ... . . . . .... . . ... ... . ... .. .. . . .... . . ..... . . ..... .. . ... . .. ... . .... . . . . . . . . .... . . ... . . . . . . . . ... . ...... ... ............... . . . . ...... .. . .. .. . ... ... . .. ... .......... . . ..... . . .. . . .... . .. .. . .................................... ..... . ... . . . . .. . .... . ... . ... . . ............... . . .. . .. . . . ...... .......... . ..... . . . . ... . .... ......... . . .... .. .... . . . . ............. . . . . . . . . . .. .... . . .................. .. .. .. . . .......... ......................................................... . . .. ... .......... . . . . ........... .. ....... . ...... . . . . ...... .. . .. . . . . . . . . ..... . .. .. ....... ... ... . ........ . .. . . . .. . ... . .................. .. . . . . ....... . . .
lowQualScore : 888888 222 2 1 8 0 0 99 0 11111 4 666666666666666666666 4 4 4 0 66 1 4 777777777777 4 9 8 4 44 4 0 11111111111111 0 4 7 1 1 44444444 1 2222 3 11 6 6 6 555555 5 0 111111 6 0 7777 9 2222 3 000 7 1 4 7 6666 0 0 888 333 7 666 11 99 7 9 3333 0 8 55555 0 0 88888 55 0 000 2 44 888 4 1111 4 9 4 9 4 6 4 9 2222 2 3 888 1 1 1 4 9 3 9 6 111 3 111111 000 888888888888888 5 6 0 0 777777 33 9 11 11 9 888 888 4 11 888 7777777777 7 6 66666 0 9 11 0 3 4444 3 88 00 6 000000000000000000000000000000000000 11111 2 222 4 5 0 0 99 0 6666 2 666 4 666 4 4 888888888888888 7 7 99 7 99 7 7 6 444444 3333333333 0 77777 0 8 3 4 222 5 3333 000000000 8 7 1111 99 0000 7 3 5 5 7777777777777 5 7 5 7 7 6 6 6 3 33 6666 7 7 777777777777777777 22 00 22 7 7 5555555555 888888888888888888888888888888888888888888888888888888888 2 2 55 333 2222222222 5 7 0 7 22222222222 00 2222222 5 222222 2 5 2 8 000000 88 0 88 2 2 5 0 0 2 0 0 00000 5 55 88 0000000 000 222 2 33333333 7 33 3 7 0 55 0 222 2 222222222222222222 00 0 0 0 5 8888888 0 0 0
consensus : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-C--G----GAC-AGGAGATGTAACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTA--TA--CCGTT-GGAAAG-TATTGAATAG-G---T-T--TCAAGAGTAT-CGTCATCCACGAAATCGCG-CAAAGCGTTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACTAT--AG-T-TGTA-CATTT--GGCTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
Reference ( family-1073 ) : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-C--G----GAC-AGGAGATGTAACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTA--TA--CCGTT-GGAAAG-TATTGAATAG-G---T-T--TCAAGAGTAT-CGTCATCCACGAAATCGCG-CAAAGCGTTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACTAT--AG-T-TGTA-CATTT--GGCTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|1 : AAGTGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGATCTTCTGAGCC-CTGACTGA-T-G--ACT-GAGCAAATTTAAGGGTTAAT---GT-CATG----AAC-AGGAGATAATACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGGAAAAGAAAAAG-TCGTAGAAGGCTAGACTCTTGC-GCAGTAT-GGTGGGTGTAGCAAGATGATACCCT--TC--AA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTTACATA-G---A-TGTAGTTTA-TGCT-A--T-TCTCAA-GAGCTTTTT-TAGT---GTAGCATTATTGGTAATACC-GACC-GTAAC----A-CTT-TTGTCC---TAT--AGCATGCGGAAATTTGTAACG--G-CCATACCAT-CATCATTAAG-AGAGGG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TATGG-ATCT---TTTGG-CAA----TAC-AGGTCTTC-TA-TG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTTACTTATTGGTTCAAAATAGT-A-ACCC-A-TG-TTCGTCA-CAGCAACAA-TGTTCGCAAATTGTCTT-TAATTG-AATATAGGAAAACATC-TTC-GA--AAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTATTT-GGTCAATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTTG--TACTT-TCATA-AAT---AC-GCTTCAAAAT--GAAAT---GCACACCAAGA-AGCGATTTACCAA---C-AGCTT-TAGCA-TTATC-ACGAATCATGA--GATCTGCTATACA-ATTT--CAATT-ATTTTCC--------CCGA---T------CC------T-----TT-----TGCTTTGCCTGCTACA---GTC-A-AGGTCCATC-AAA-TTTTATCCGGC-ATCTTCGACGGACTCC----GTGCCAGTCAGAAATTTCTTTCT-CA-C-T-ATGAACTG-TTCCA---------------GA-C-CATTATAATCT-CCCAA-T--AAGTGAATCA--TCTGCATTA-CCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-AT--TATCTATAGCT-----ACATTCTC-ACAG-GGTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCAACTGGCTCTATCGCGAAATGACTTAATATTAAGTTTAAAATTATGTGGAACTGTAAGGCT----CATGTTTA---A--T--TT------G-TTTTGGA---------------AAGA----------TCCATGAAATGGCG-CAAAGCATTATCACGCTGTGG-TACAATACA-CATTAC-ATATCCAATA-----TCGCA----CG-TTGTTATAAACTATC-AGTT-TGTA-CATTT--GGCGTAAT--GCTGATGACGAG-AG-CTAGATCT-G----CC--AGACT--TA---------G---A-----TG-------G---TGG-TA-------CA------GAGGGGATTGAAT-TGAAT--TG----------GACAAGT-GGTGCTAT-TGTGC--CCAA-G--GGAACAGTTATTTGACG--ATTAGATCA---CTAGGTTCGTTATCTTTTG--CCTTATACA-TACTGTGTTGCTTCTGGTGATGATCAGGGAAAAT-GGAACTAATGAGAGTGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-GTA-ATATTT--GATGA-TCATGATCACATTCAG-TTGAAGCGCGT--TAATGCTCAAATTTATGCTAAATTTG-TT-GTTTACATAC----AT-----TCA----TTAATTTGGA-AAC-ATATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|10 : gACTTCT-CGCAATT--AAGTAAA-CA---CTGCATTT-CTGAATCACTGAGCTTTATGCTAACTT--A------TATAAGCTTT-AA--TT---AGATCT-----ACATTCTC-ACAGCATTTCCTAGCCATTTTCACAA-CAGTGGTCAA-C-GAATGGCTCTAT--CGAAATGACTT-AT-----GTTTAAAACTATGTGGAGCTG-AAGGCT----CGTATTTATTTATTTTTTT-GAAAAG-T----AACGC-T---T-T--TCAAGATTAT-CATCATCCATGAAATTGCG-CAAAGCGTTTTCGCGCTGTGG-TACAATACA-CATGAC-ATATTCAACAG-CCCTCGTA----CG-TCG-T-TAAA------AG----------TTT--GGCTTAAT--GCTGATGACAAGCAG-CTAGATCC-C----TC--AGACT--TGGAAGGGAATG--AA-----TGGA---AAGT--TGG-TA-------CA------GA-GGGATTGAATATGAA---TG----------GACAAAT-GAAGTTAT-TGTG
gi|11 : CATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGG-----TAA---ACGGACAGAAT-GTCACA-GGAC-----AAAAAG---------T-C--------AC-AGGACATA-AAAG-ACGACCA-GAGAAGAACTGCTTAAGTTTTTGG---------------C---CAAGGCTAGA-TCTGGC-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TCTCCA--ACTTCAAAA-ATTGCTTCACAAG-CTC----AGATGT---ACGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCCA------AATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-GAGCTTTTT-TAGT---ATAGCA-TATTTGTAATACCAGGCCGGTAAC----A-CTT-TTGCCC---TTTTAGGCAT-CGT-AATTTGT-ACA--G-CTATACCAT-CA-CA-TTAG-A-A-GG-TATGCAGTAAAGAA-C-T-T-CATTG--TGC-T---TACGG-AT
gi|12 : TTTTT-CATACTGGTTCAAAATAGT-G-ACCC-AATGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTGGTGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTTTGGTC-ATCTGTCTATATA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TATCTTT--CAATT-ACTT-CC--------CAGAGTTT------TCAAGACAT-----TT-----TGCCTTGCCTGTTACA---ATCAATAGGTCGGCC-AGA-TTTTG--CAGTAATCTTTGACAGACTCT----GTG------AGA---TTCTTTCTCAA-C-TGACGAACTG-TCCCA---------------
gi|13 : aAAATGCATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGA-CTTCTGAGCCACAGACTAA-T-G--ACT-AAAC-----CAAGGGCT--T---GT-C-----------AGGAGATGTAACG-ACGACCA-GAGAAAAACTGCTTAAGTTTT-GGAAAAAGGAAAAAG-TCGTATAAGGCTAGA-ACTGGC-G-AGTAT-GGTGGATGTGGCAAGACGGTACCCTTCTC--CG--ACTTCAAAA-A-------GCA-------------------ATTTGATCGA--GCATT-ATCATA-GAGTAGACGAACAT-ACCTAAAATTTAATGCTGACATA-G---A-TGTAGTTTA-TGCTAA--TATCTCAA-CAGCTTTTTATAGTATAATAACA-TATCGGTAATACC-GACCGGTAGC----A-CTT-TTGCCC---T
gi|14 : aAAATGCATGCTTAACTTACGTTTCACTCTGATTT-----GGGTAGA-CCTCTGAGCCACTGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-----------C-AGGAAATGTAAAG-ACGACC-AGAGAATATCTGATTAAG--TTTAAGAAAAAGAAAAAT-TCGTATAAGGCTAGC-TCTGGC-G-AGTAC-GGTGAGTGCGGCAAGACGGTACCCTTCTC--AG--ACTTTTAAA-ATTGCTTCACAAG---C----A--------ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTGATATA-G---A-TGCAGTTTA-TGCTAA--TATCTCAA-AAGCTTTTT-TAGT---ATAGCAT
gi|15 : TGGTTCAAAATAGT-G-ACCCCA-TGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTG-TGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CG-G-T-TT-----GTACTTGTACCCATTTTT-GGTC-ATCTGTCTATACA-----TGTGGT-ATCCATCTGGCAGAAATCTTT-CG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TA-CTTT--CAATT-ACTTCCCAGAGTTTTCAGA-----------C------A-----TT-----TGCCTTGCCTGTTACA---ATC-ATA
gi|16 : cAAACTGC-G-ATCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCG-CAGTTTGCAAA---TT-TTC-----AATATATATTTGG-CC-A-TCT------TTACGCGGATTCTTTTCT-GATC-ATTTGTCAGCAAA-----TGTGGT-ATCCATCTTGCATTTATC-TTTCGGAGACCT-----A-AAT---GCTTTTTCAAAATTGAAAATATGGTTC-CCGA-----TGATATATCAA---CTAAATT-T-GCA-ATACC-TC---TTGTGGTCAATCACCCAT-CGTCATTAACAATT-TTTT
gi|17 : cCCAA-CCATTTCTACAA-CAGTGGACAA-C-GACTGTCTCTATT-TGAA-TGACT--GTA-TAACTTTAAAACTATGTAGAGCTG-AAGGTT----CGTATTTA--TA--ACGTT-GGAAAGGTATTGAATAG-GGA-TAT--TCAAGAGTACATGT-ATCCACGAAATCGTG-CAAAGCGTTATCGAGCCATGG-TATAATATA-CCTTAC-ATATCAAAtttaaatttgttca
gi|18 : CCA-CCT-ATGAACTGGTCCCA---------------GGCCTCATTAACTTCT-CCCAATT--AAAGAAA-AAAATCTGCATTATCCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A--------ATATCT-----ACATTCTC-ACAGCGTTTTCTA-ACATTTTCAACAACAGTGGTCAACCCGA-TGGCTCTA-T-CGAAATGATT
gi|19 : CATTCGAAAACTTCATTCTTTA-CCT-ACGAACTG-TCTCATAACATACCATATCAGACC-CATAAACTTCAACTTAATTTTCAGTAAA-AA--TCTGCATTA-CCGAATGATTGAGTTTTGTGCTAACTTTTATTCATGTATCA-CTTC-----TA---ATTCCTTATAAATATTCTCGAC-TCGTTTTCTA-aa
gi|2 : CATAGTTT-GCTTCCAGTTGTTTT---TATTGGATCAAA-----------------TTTCGTAACCAGCAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAACCTTT-TTA-AA--AAT---TGCTTAG-CGGA-T-A------GTACTCATACTCGTTTTT-GGTC-TTCTACCAATATA-----TGCGGT-ATGTATCTAGCAGAAATATTTT-G--TACTT-TCA-A-A-C---AT-GCTTCAAAAT--GAAAT---GC--------------------CAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAC-TA-TTTT--CAATT-ATTTCCC---------TGA-----------C------G-----TT-----TGCCTTGCCTGTAACA---GTC-ACAGGACCGCC-AGA-TTTTG--CCAC-ATCTTTGACAGACTCA----GTGCCAGTCAGAAATTTCTTTCTCCA-CCT-ATGAACTG-CCCCA---------------GACC-CATTAATTTCT-CCCAATT--AAATAAA-AA--TCAGTATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-ACGGTA---ATAACT-----ACATTCTC-ACAGCTTTTCTCAGCCATTTTAACAA-CAGTGGTCAA-T-GACTGGCTCTACT--GAAATGACT----A-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----TGTGTTTA--TA--CTGTTTGAAAAG-TATTGAATAG-AGCTT-T--TCAAGAGTAT-CGTCATCCACCAAATCGTG-CAAAACATTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-TAAACT-------T-TG-N-NNNNN--NNNNNATT--AC--ATATCGAACAGTCCACGTAC-GTCGTTC--AAACT--TT---------GCTGA-----TGAC---AAG---CAGCTAGATCCCCCAGACTTGGAAGGGAGTGGATG-GAAAGTTGGTGCACAGGGGACAAAT-GGCGCTAT-TGTGC--C--ACA--GGAAC--TTATTGac
gi|2 : CTTTGN-NNNNNNNNN-NATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-CAAACT-------------------------T--T--GCTGATGACAAGCAG-CTAGATCC-C----CC--AGACT--TG---------G--AA------------------------------------------GGGA------GTGGA---TG----------GA-AAGTTGGTGC-A---------C--A-G--GGGAC--AAATGGC--GCTATTGTGCCA---C--AG---G--AACTT--A---TT--GACA-TAATATGT-GCTTCTGGTAATGAGCAGGG-AAAT-GGAACTGATGAAGATGGGGATGGAGTGGA-A-A-TGAACAAT-CTGATCGAT-T-AGATATTA--GATGATT-ATGATCAacataatatgtgcttctggtaatgagcagggaaatggaactgatgaagatggggatggagtggaaatgaacaatctgatcgattagatattagatgattatgatcatgatgatgactgatttgataatgctcactttattactgatttg
gi|20 : catagtttgcttccagttgtttttattggatcaaatttcgtaaccagcaacaatgtttgcaaattgtctttgattgaatttaggaaacctttttaaaaattgcttagcggatagtactcatactcgtttttggtcttctaccaatatatgcggtatgtatctagcagaaatattttgtactttcaaacatgcttcaaaatgaaatgccaacagctttggcaatatcacgaatcgtgtatctgccactattttcaattatttccctgacgtttgccttgcctgtaacagtcacaggaccgccagattttgccacatctttgacagactcagtgccagtcagaaatttctttctccacctatgaactgccccagacccattaatttctcccaattaaataaaaatcagtattaccgaatcactgagttttgtgctaacttttatataagctttacggtaataactacattctcacagcttttctcagccattttaacaacagtggtcaatgactggctctactgaaatgactataagtttaaaattatgtggagctgaaggcttgtgtttatactgtttgaaaagtattgaatagagcttttcaagagtatcgtcatccaccaaatcgtgcaaaacattatcgcgctgtggtacaatacacattacatatcgaacagtccacgtacgtcgtttaaa-CA-TGAA-AAG-AA-TATGTAATAAAGAA-C-CGT-CTTTG--TGC-T---GATGA-TTCT---TTTGG-CAA---CTAT-AGGCCTTC-TACTG-TATTTAGTTAGCCATATTAT-GTTTCCAATTTTCT---TTATTGCTTCGAAATAGTAA-ACTC-A-TGTTTTGTCCTCAGCAACGA-TGTTAGTAAATTATCTT-Ttgatgatgactgatttgataatgctcactttattactgatttg
gi|21 : AGAA-C-T-TTCTTTG--TGC-T---C-TGGCATAT---TCTTG-CTA---TTCCTTGACGTTC-C-CCT-TGTTCAGTCACCCACACCTT-G---TCAATTTTTCT-TTGA--GTTTCAAAGTAGT-GTACCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCGCAGTTT
gi|22 : tgcTACCCGTATTT-GGTC-ATCTGTCAATATACCGTATGTGAT-GTGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCAAGATAGCGATATGCCAA---C-AGCTT-CAACA-TTATC-ACGAACCATG---GATCTGCTAT-C
gi|23 : aGTAATTCC-GACCAGTAACGAAAA-CCTGTTACCCGGCTTC--GACAC-CGGAATTATGTACCGCAG-CTATAACA
gi|24 : AATT--CACTAAA-AA--TCTGCATTA-CCGAATGATTAAGTTTTGTACGAACGTTTA------TATAAGCTCTAA---TA---Aataaacggggaggagaatataacaataacaatccttattatagtggagtctatgaaggttcatttg
gi|24 : GACTGGCTTTATT--GAAATGACT----------------ATTA-GTGAAGCTG-AAGGCT----CATGTTTA--TA--CTGTT-GGAAAgactggctttattgaaatgactattagtgaagctgaaggctcatgtttatactgttggaaa
gi|25 : aattcactaaaaatctgcattaccgaatgattaagttttgtacgaacgtttatataagctctaataaTTTCACTCTGATTTTATTTGGGTAGA-CCTCGGAGCC----ACTGA-TCG--ACT-GAGC-----CA---------------------------AGGAGATGTAACG-ATAACC-AGAGAAGAACTTCTTAAGTTT---------------AG-TCGTGTAAGGCTAGA-TCTGGA-G-AGTA
gi|26 : AGATG-AAGGCTGAGACGTGTTTA--TA--CCGTT-AGAAGC-TATT-----------------CAACAGTAT-CGTCATCCGCGAAATCGTGCCAAAGCATTATGGCGCTGTGA-TACAATACATTATTAC-ACATCGAACAG-CCCT
gi|27 : CTGCCAT-CA-CTTT--CAATT-ATTTCCC--------TGAA---TTTGGGACA------T-----TA-----T-CCTTGCCTGTTACA---GTA-ACAGGTCGGCC-AGA-TTGTG--CTGC-ATCTTTGATGGACTCT----GTGCCAGCCAGAAATT
gi|28 : AAAGTTATGC-AAATTTG-TTTGTTTACATACTTTAAT-----TAA--TGTTAATTTG-A-AAC-GTATCACT-ACTCAAAACTATATATGC-AAACTTG-TTTAT-TTGCATGAATTGATATTTAct
gi|29 : TG-AAGGCT----CATGTTTA--TA--CCATT-GGAAAGGTATTGAGTAGAG---C-TAATCAAGAGTAT-CATCATCCACAAAATTGTG-CACAATATTATTGTGGCGTGG-TACAATACA-CATTAC-c
gi|3 : TGATTT-----GGGTAGA-------AGTTGGAGA-TGA-T-G--A-T-GAGCTATT-TAAGGGCT--TAAAAT-T--GTAATGATAAGGAGATGTAAAG-TC-----AGAG-AGAA-TGATTTAGTTTT--GGAAAAGG--AAAG-T-GTATAAGG-TAG--TATGGT-G-AGT-T-GGTGGGTGTGG-AAGACGATA---T--TT--AA--ATTTAAAAACATTGATT---AAG--TA----AGATGT----TGTG-TGGA--G-ATT-ATAAAA-AAGTAGACGA--AT-GC----------ATG-TGA---A-G---A-TGTAGTGTA-TGA------GTTTAAA-GAGTTTTTTGTATT---ATTAGAATATTGGT-ATA---GA-AGGTAAA----G---T-TTGAAT---TTA--GG----TGG--ATTTGT-ACG--G--TATA---------A-TAAATAGA-GG-TATGTAGT-AAGA----T-T-TTTTG--TG--T---TATGG-A------TTTGG--A------AT-AG---TTA-TATCG-TGTTTAATTAG--ATATTTT-GTT---AAAATTTTT-ATTATTAGTT---AAT-GT-A-A----A-TGTTT--------GTAAAGACTGTTTG-AAATTGTTTT---ATTG-AATATAGGAA---ATT-TT---AGAAAT---TG-TTAG--G-G-T-T------GTA-TAGTA-ATGTATTT-GGT--ATCTGT-AATAT------TGTGGT--TG-A--TGG-AGAAAT-TTTTTG--T--TT-T---A-AAT---AT-GTT---AAAT--GAAAT---GAA-----AGA-AG-GATTTGCAAATATT-AGATTATAG-A-ATAT------ATTGTG---TAT-----AT-TA-ATTT--TAACTGATTT
gi|3 : AGTCAGA---TTTTTT----A---T-ATGAA-TG-T---A---------------GGC---ATTAATTT-------AT----AGTAAA-AA--TATGTA------AGATAATT-AGTTTTGTG-TAA-TTTTA------TATAAGATTA-A---TA---TTATTT-----tgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaagtcagattttttatatgaatgtaggcattaatttatagtaaaaatatgtaagataattagttttgtgtaattttatataagattaatattattt
gi|30 : tgatttgggtagaagttggagatgatgatgagctatttaagggcttaaaattgtaatgataaggagatgtaaagtcagagagaatgatttagttttggaaaaggaaagtgtataaggtagtatggtgagttggtgggtgtggaagacgatatttaaatttaaaaacattgattaagtaagatgttgtgtggagattataaaaaagtagacgaatgcatgtgaagatgtagtgtatgagtttaaagagttttttgtattattagaatattggtatagaaggtaaagtttgaatttaggtggatttgtacggtataataaatagaggtatgtagtaagattttttgtgttatggatttggaatagttatatcgtgtttaattagatattttgttaaaatttttattattagttaatgtaaatgtttgtaaagactgtttgaaattgttttattgaatataggaaattttagaaattgttagggttgtatagtaatgtatttggtatctgtaatattgtggttgatggagaaattttttgttttaaatatgttaaatgaaatgaaagaaggatttgcaaatattagattatagaatatattgtgtatattaattttaactgattttgaaattgtgataagtaaaggttagattttttaatgttgaaaggataggaTAAGTTTT-GAAAAAAGGAAAAAGGTTGCATGGGGCGAAA-TTTGGAAG-AGTAT-GATGGGTATGGCAAGACAGTAACCT--TC--AATGACTTCAAAA-ATTGCTTCACACG-CTC----A
gi|31 : ACAAGACTC----AGATGCTCCATGTGGTGGGAGGCATT-ATCATGGAAGTTGACGAACAT-GCCTA------AATCCT-ATTTA-T---A-AATAACTTA-T-AT-A--AATCTT---GAGCTTTTT-T
gi|32 : GTCAT-TGCTTG-AATTTAG-AAAATATT-TTG-GGG-AAT---TGCATAG-TG-AAC-T------GTACTCTTGCCCGTTTTT-GATC-ACCTGTCAATATA-----TCCGGA-ATGCATCAGGCAGAtg
gi|33 : -CA-CA-TTAG-A-A-GG-TATGCAGTAAAGAA-C-C-C-CTTTG--TGC-T---TACGG-ATGT---TTTGG-CAA---TTAC-AGTTCTTC-TATCG-TGTTTATTTAGCCATATTTT-GCTTCCAA
gi|34 : -ATCATG-AAGTAGACGAACAT-GCCTA------AATCCGGACACA-G---G-CATCGTTTA-TGAC-A--TTTCTTA---AGCTTTTT-AAGT---ATAACATC-TCGGTAATACC-GACCTGTA
gi|35 : ATCTGCCAC-CG-CTCT--CGATT-ATTTCCC--------CCGA-----------C------T-----GT-----TGCCTTGCCTGTTACA---GTC-ACA-------------TTTTG--CTGA-ATCTTTGACGGTCTCT----GTGTCAGTCAAA
gi|36 : cT-GCTTCCAATTTTT---CTTATTGG------------A-ACCT-A-TGTTTCGTCACCAGCA-CAA-TGTTTGCAAATTGCCTT-TAATTG-AATTTAGG-AAACAAT-TTC-t
gi|37 : TT-CTTATTGGTTCGAAATCGTGA-ATCC-A-TATATCGTCACCAGTAACGA-TGTTTGCAAATTGTCTT-TGATTa
gi|38 : tga--ACTTCAAAA-ATCGCTTCACAAC-CTCTGTCAGATGT---ATATTGTGGA--GCATT-ATCATG-AAGTAGACGAACAT-G
gi|39 : CGTTATCGCACTGTGG-TACAATACC-CATTAC-CCATCAGACAA-CCCTCGTA----
gi|4 : acGATTT-----AGGTTGA-CTTCCGAGGCACCGACTGA-T-G--GCT-GAGC-----CAAAGGCT--T---GT-C--G----G-----GACTTGTAATG-ACGACCAAA------------TA----TTTGGAAAAA------AG-TTGCATGAGGCTAGA-CCTGGA-G-AGTAT-GGTGGGTGTGGCAAGACGGTA--------------ACCTC-------CG----ACGA--CT--------TG------GTAATGGA--GCATT-ATCATG-AAGTAGACGAGTAT-GCCTA------AATCCTGATACACG---G-CGTCGTTT---GAT-A--TTTCTTGA-GA---TTTT-TAGT---ATAA-AGTCTCGGTGATACC-GACCTGCAAA----A-CTT-TTGACC---TTC--GGCAC-CAGAA-TTTATA-TG--G-CTATACTAT--------------------ATGCAATGAAGAA-CAT-T-CTTTG--TGCATGCGTATGG-TTCT---TTTGG-CAAGTTCTAG-AAGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GTTTCCAATTTTT---CATACCGGTTCGAAATAGTGA-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG--ATTTTGAGAAACATT-TT--GAGCAAT---TGCTTAG-CA-A-T-TTGTATAATACTCATACACGGTTTT-G
gi|4 : ATGTCAA---A-GGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAT-CA-CTTT--CAATT-ATTTCCC---------TGA---C------CT------T-----TTAAACATGGCTTGCCTGA-ACAA--GTC-ACAGATCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACCCT----ATGCCAGTCAGAAAATTCTTTCTCCACC-T-ACGAGTTA-TCTCA---------------tgttgttgtttcgtttgcttgtttgtttgtttcaaatgtcaaaggctttggcaatatcacgaatcgtgtatctgccatcactttcaattatttccctgaccttttaaacatggcttgcctgaacaagtcacagatcggccagattttgctgcatctttgacggaccctatgccagtcagaaaattctttctccacctacgagttatctca
gi|41 : gatttaggttgacttccgaggcaccgactgatggctgagccaaaggcttgtcgggacttgtaatgacgaccaaatatttggaaaaaagttgcatgaggctagacctggagagtatggtgggtgtggcaagacggtaacctccgacgacttggtaatggagcattatcatgaagtagacgagtatgcctaaatcctgatacacggcgtcgtttgatatttcttgagatttttagtataaagtctcggtgataccgacctgcaaaacttttgaccttcggcaccagaatttatatggctatactatatgcaatgaagaacattctttgtgcatgcgtatggttcttttggcaagttctagaagccttctaccgtgtttagttagccatattttgtttccaatttttcataccggttcgaaatagtgaacccatgtttcgtcaccagtaacaatgtttgcaaattgtctttgattgattttgagaaacattttgagcaattgcttagcaatttgtataatactcatacacggttttgtgttgttgtttcgtttgcttgtttgtttgtttcaa-TACAACACA-CATTAC-ATATCGAACAG-CCCTCGTA----
gi|42 : GTAGTTTAATGCT-AG-TATCTCAAAGAGCTTTTT-TGGC---ATAACATttcttccgtgttta
gi|43 : t-T-ATGAATTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAa
gi|5 : -ACCATG-AAGTAGATGAACAT-GCCAA------AATACTGACACA-G---GGTGTTGTTTA-TGGC-AAGTAGTTCTT-GAGCGTTTT-TAAT---ATAACAT-ATCAGTAATACC-GACATGTAAC----A-CTG-TTGCCC---TTC--GGCAC-CGGAA-TTAGTA-CG--G-CTTTACCAT-CA-CA-TGAG--GA-GAATATGCAATAAAGAA-C-----CTTTG--TGC-C---TATGG-TTCT---TTTGG-CAA---CTAC-AGACCTTC-TGCCG-TGTTTAGTTAGCCATATTTT-ATTTCCAA--TTTTT-ATTACTGGTTCGTAATAGTGA-ACGC-A-TGTTTTGTCACCAGTAATAA-TGTTTGCAAAC--CTTT-TGGTTG-AATTT-GGGAAACATG-TT--GAGCAAT---TGTTTGG-T----T-T------GTACTCGTACCCGTTTTT-AGTC-ATC---------------TGTGAT-------------GAAGT----TCG--TACTT-TCA-----------------AAGAT------T---GCTC-CCGCGATAG--------------C-AGTTT-TAGCA-GTATC-A---------------CTACCAT-AA-CGTT--CAATT-ATTTCTC--------TGGC---T------TG------TAGACATT-----TGCCATGCCCGTAACAGTCGTC-ACAGTTCGACT-AGA-TTTTG--CTGC-ATCTTTCACAGACTTTACAGGTGTCAGTCAAAATTTTCTCTCTCCATC-T-ACGAACTG-TCTCA---------------
gi|6 : -CAAAGCATTATCGCGCTGTGGGTACAATACA-CATTACGATATCCAACAGGCCCTCGCAAGCACGGTCGTT-TAAACTATGAAG-T-TGTAACATTTTGGGCTTAATCCGCTGATGACGAACAG-CTAGATTCTG----CCGCAGACT--TA---------G--AAGAGAATGAATGTAAGAGATGG-TA-------CAT-----GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGCCAC--A-G--GAAAC--TTATT----G--ACTAGATCAAGCT--GTTTCGTTATCTTTTAACCTT--TACAGTACTGTGGTGCTTCTGGTGATGAGCAGGG-AAATGGGAACTAATGAAGAAGGGGATGAAATGGATA-ATTGAACAGTCCTGATCAA----A-----TC--AATGA---ATCACCGCATC--AGTCGAAGCGCGTTGTAATGCTCAGAATTATGC-AAATTTGTTT-ATTTACAAAC----ATTCATATAA--T-TTGATTTGGATAACGGTATTACTAACTCAAAATTAT----GCAAAAATTG-TTTATGTTACAAGAATTGATATT
gi|7 : aTGTGG-T-TAATA----ATTA--ATAT-AAAGAG--------A----TG-TGATT-TAAA-TAT--AG-TGTGTA--ATTT--GG-TTAAT--GATGATGA-GAG-AG-CTAGATTA-G----AT--AGAGAGATA---------G--AA-----TGGA---AAG---GGG-TA-------AA------GAGGG--TTGAATA--GA---TG-------------AAGT-GGTG-TATATGTG---C--A-GATGGAA---TTATTAG--A--ATAAGAT-A---T--GGTTAGTTA--TTTAA--ATT--TAAA-T----TGTTGATT-TGGTGATGAGGAAGG-GAAT-GGA--TGATGAAGAAGGGGATG-AGTGGA-ATA-TGAA-AGT--TGAT--ATGG-A-ATATTTTGGATAA-T-ATG-TCA---T--A-TTGAAGAGCGT--T-ATGAT-AAATTTATG--AAATTTG-TT-A-TTAAACAT----AT-----TTAATT-TTGCTTT-GA-AAC-GTATTATT-A---AAAATTAT----G---AAATTGTTTTAT-TT--AAGAATTGATATTT
gi|8 : taattttatataagattaatattatttaggtttataagaattttaaaaagtggtaaagatggttatgaaatgatgaaaaaattgaaaagatatggAAATGCATGCTTAATCTCAGTT--ACTC--GTTT-----GAGTAGC-CGTCTGAGTCACTGACTGA-T-GC-GCTTGAGC-----CAAGGGCT--T---CTTC--GT---GAC-T-----TGTAACGTAAGACCA-GATCAGA-CTTCTTAAGTTTT---GAAAAAAGAAAAG-TTGT-TAAGGCTAGA-ACTGGA-G-AGTATTGGTGGGTATGGCAAGGCGGTGCC-----------------------TC-CTTCACAAG-TTC----AGATGT---ATATGAT-GA--ACATTAATCATA-AAGTAGACAAACATGGCCTA------AATGCTGACACA-GGGCA-AATCGTTTA-TGAT-A--TTTCT--A-GA-----------T---AT-ACA-TATCGATAATACC-AACCGGTAAT----ACCTT-TTCCCC---TTT--GGCAC-CGG--ACTTGTTACG--GCCTATA-CATCCA-TA-TTAG-AAG-GA-TATGCAATAAAGAACC-T-T-CTTTG--TGC-T---TATGG-TTCTGGCGTTGG-CAA---CTAC-A-GCATTC-TACCG-TA-TTATCTAACCATA-TTT-GCCTCCA---TTTTT-CTT
gi|9 : aAGTAAAGAA-C-T-TTCTTTAGTTGT-T---TACTG-ATCT---TTTGGGCAAG--CTAC-AGGTCTTCCTATCGGTGTTTAATTAGCCATATTTTTGCTTCCAATTTTTTC-TTAATTGGTTCAAAATAGT-A-ACCC-A-TGTTTCGTCAACAGCAACAA-TGTTTGCCACTTGTCTT-TAATTG-AATATAGG-AAACATT-TTC-AAGAAAT---TGCTTAGTCGAA-T-T------GT-CTCGTACCCGTATTT-GGTC-A-------------------TGGTAATGCATCTGGCAGAAATCTTTT-G--TACTT-TCA-A-AATAAAAT-GCTTCAAAAT--GAAAT---GCAC-CCAAGA-AGCGATTTGCCA------AGCTT-TTACATCTATCAACGAATCATA---GATCTGCTAT-CA--TTT--CAATT-ATTTCCC--------C-GA-----------C------T-----TT-----TGCATTGCCTGCTACA---GTC-ACCGGTCCATCAAGATTTTTC--CTAA-ATGTTCGACGGACTCC----GTGCCAGTTA
blockSeqs : TTATTT CT A G A C TC T TATT C TAAAATTGTAATGATA C A T AA A A TAAGAAAAAGAA G . AA . T CCCTTCTCCA A C T C C CTCTGTC G CTCC C AG A G G AAATTT C GGCAA A C AAG A CAAA A ATA T A G GAAA C G GGC TTA . AAT AC CA C C CCA . T TAGA A C CGT GT A GCG C CA GGC G GTTC T G C G T TTC A A AA C A C T G C T A ACC G CTGAGC ATA CAATTTGTATA T . T ACCGTA AA C TC GA C AC AAA T TG ATG ATTTGCGAT C A TATT A G TC A T GTCA . TC AA G CAGAGTTTTCAAGACAT AAACA T GTC A G A T . A ACAG AAC C CC G G TAACATACCATATCA T A TT . AA T G TTCATG ACGGTA T TATAA G G A CCC A TTT GTATAA . GAGA TT TTTT T G A G TAGGGATAT T A C C G T G C GC AGCA G . CTATGAAGTTGTAACA TG CT CC C T GTCGTTC TTGCTGATGACAAGCAGCTAGATCCCCCAGACTTG A T AT AGT GTGCACAGGG C T T A CCACAG . GCGCT C AGCT T C T A TTAACC . G AA T C . G A T G TAAT C CC CG TTAGA TTG TT A CATCAG TG A C G C T TGT T TTTAATTAATG GG T G A C ATATGC T G G
blockSeqs : T CC A A . . C . . C TCTTCGTGAC G C . A A A GGAAAAAGGAA . . C . . CCCTTCTCCG A . T C C ACTC G T C . . . . . . GGT . C AA A CAA G . A . G . . . . C . AA TA . . A CA . G AAG . . TTT . . . T A . . GC . A . . . CTT A A GT . . . T . . T A AAT G CTGAGC . TCGAATT . . T A A C TT . C AC . . . . ATTTGCGAT C A CT . G A . T C . TC . . AGAGTTTTCAGACA . T A . C . . . . . AAT C CC . . . . . . . . . T . AATT T . . G . C C TC ATAA . . . AC . G A G TAGAGCTTT G . C . . . . A C . . . TATAGTGTGTAA . NN . C . TGCCGC TAGAAGAGAATGAATGTAAGAGATGGTACAT G G GT . . C . C . CCACA . AGA C C T A T T TAAA . . AC T C . . A A A ATA C C CA TGGAA A T A TA . . . A C . AT A ATTCATATAAT G . . . C GCA . . A
blockSeqs : T CC A T . . . . . C TGTCGG A A . A A T GAAAAAAGGAA . . C . . CCCTTCTCAG T . T A C CTC G T C . . . . . . AT . C AA A CAA . . T . A . . . . A . AA A . . C CA . A AAG . . ATT . . . T T . . C . T . . . TTA A T GA . . . A . . T A AAC . CAAGA . CGGTTT . . A A A C TC . . A . . . . ACCCAAGAT T A C . G A . G C . C . . TGAATTTGGGACAT . A . . G . . . . . AAT T CC . . . . . . . . . G . AATA C . . . . C C TC TAT . . . CT . . A G TAGAGCTAA G . C . . . . G T . . . CTTTGNNN . CT . C . CTC TGGAAGGGAATGAATGGAAAGTTGGTACA G T AT . . C . C . CAGAT . G . T . . . . A . . . . . . . . A . AA . . . A C . . T . . A C ATTTAATT G . . . . G . . .
blockSeqs : T CT G A . . . . . C TCAC G C . A A A GAAAAAAGA . . C . . ACCTTCAATG A . T C C CTC G T G . . . . . . AT . A AA G CAA . . G . G . . . . C . AA A . . C CA . T AA . . TTT . . . T A . . T . G . . . TTC G A GA . . . C . . A A AAC . GGGG . CGGTTT . . A A A A C . . A . . . . TCCCGCGAT C A C . A A . G T . T . . TGGCTTGTAGACA . T . . G . . . . . AAA C CC . . . . . . . . . G . ATA A . . . . T C CT . . . . CT . . A . CGCTTT G . C . . . . G T . . . AG . T . C . CCC GATAGAATGGAAAGGGGTAAA . T G . . . . C . CAG .
blockSeqs : T CG A C . . . . . C TGTC G A . A C A GGAAAAGG . . A . . TTTAA A . C C C TTC G T G . . . . . . AT . A AG A AAA . . T . T . . . . C . A A . . . . . G AA . . TT . . . C A . . T . A . . . TTA A A GA . . . T . . A A AAC . GAGC . CCATCT . . A A A C C . . A . . . . ACCCAAGA C T C . A A . A G . C . . TGACCTT . T . . G . . . . . ATT C TC . . . . . . . . . A . TA T . . . TT . . . CC . . . . . G . . . . . . G C . . . CT . . . . . GAT TGGAA . . A . . . . . .
blockSeqs : . . A T . . . . . . TGTC C T . A . . TGGAAAAA . . T . . CC A . C C . TA . . G . . . . . . AT . A A T TGA . . T . T . . . . T . A A . . . . . T GA . . TT . . . T T . . C . G . . . TTC G C G . . . A . . A A AAC . GAGC . CGGATA . . A A G C T . . A . . . . TCCCGA . A C . G T . G T . A . . CCGACT . A . . C . . . . . . C C . . . . . . . . . . A . . . CC . . . . . A C .
blockSeqs : . . . . . . . . . . . . C . A . . TGG . . A . . . . . C . . CT . . G . . . . . . AA . A A T CTT . . . . T . . . . . . . . . CC . . . T T . . C . G . . . TCT G A G . . . C . . A G A . AAA . TGAACT . . A . A . T . . A . . . . AAGA . T A . A A . G T . C . . TGACG . T . . . . . . . . . . . . . . . . . . G C .
blockSeqs : . . . A . . . . . . C . . . . . . . . . GC . C A A TA . . . . G . TT . . . T T . . . . . . . . TT G A G . . . C . . T G . . AGA . GGTT . . . . . . T . . . . . . . . . . C . T A . A G . C . . CGACT . . . . . . . . . . C .
blockSeqs : . . . . . . GC . G A A T . . . . . . . . C A . T A A A . . . C . . A . . . C . TTT . . . . . . . . . G . . . . C . . . . . A
blockSeqs : . . . . A . T A . . C . . A . . . C . . . . . . . . . . . . . .
blockSeqs : C . . A . . . C . . .
blockSeqs : . . . . . . .
blockSeqs : .
blockSeqCons : CC* ***** TGTC***************** A* NGAAAAAGGA** CCCTTCTCCG**** AA** AA* A* CA** AA*** C*** TTC* CGAGC* CGGTTT********* T* A** N*** TGACTTCGACN************************* ** CC* ATA******* C** TC** TA******* CC** TAGAGCTAT**** C* CTTGTAA*********** AT *** CAA******** **
originalCons : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGA-CTTCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CAAGGGCT--T---GT-C--G----GAC-AGGAGATGTAACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGAAAAGGAAAAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCT--TC--AA--ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNT-A--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAAATTTGTAACG--G-CTATACCAT-CA-CA-TNAG-AGA-GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CG-A-T-T------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATT-ATTTCCC--------CNGA---T------CC------T-----TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCA-C-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA-CCGACTGGCTCTATT-CGAAATGACTT-ATA-TAAGTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTA--TA--CCGTT-GGAAAG-TATTGAATAG-G---T-T--TCAAGAGTAT-CGTCATCCACGAAATCGCG-CAAAGCGTTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAACTAT--AG-T-TGTA-CATTT--GGCTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGC--C--A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
finalCons : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGACC-TCTGAGCCACNGACTGA-T-G--ACT-GAGC-----CAAGGGCTTGTC-----------------AGGAGATGTAACG-ACGACCA-GAGAAGAACTGCTTAAGTTTTNGAAAAAGGA--AAAG-TCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCTTCTCCG----ACTTCAAAA-ATCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNTAA--TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGGAA-TTTGTA-CG--G-CTATACCATCA--CA-TNAGAA---GG-TATGCAGTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAAC---TAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTTC-TTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTCGAGC-AAT---TGCTTAGCGGTTT---------GTACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTT-G--TACTT-TCAA--AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTGN---ATCTGCCAT-CA-CTTT--CAATT-ATTTCCCTGACTTCGACN-------------------------TT-----TGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCACC-T-ACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTTATA-------ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAAC--GACTGGCTCTATC--GAAATGACTTA-------GTTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTA--TACC--GTT-GGAAAG-TATTGAATAGAGCTAT----TCAAGAGTAT-CGTCATCCACGAAATCGCG-CAAAGCGTTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAGC-CCTCGTA----CG-TCGTT-TAAACTTGTAA-----------TTT--GGCTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATATGAA---TG----------GACAAGT-GGTGCTAT-TGTGCAA--------GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTT--TACA-TACTGTGTTGCTTCTGGTGATGAGCAGGG-AAAT-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|40 ): AGATACTTTATCATACCAATGCTTTGACTAAACTTGCTGAAACTTTGTA
Unaligned ( gi|44 ): GTAACACATAATCTTTTAAAGATTTGATTGTAA
Alignments
lowQualScore : 111111 11 11111 1111 3333333333333333333333333 1111 11111 11111 11111111 1111 111111 111111 1111111 1 1111 111 1111 1 1111 111 222222 11111 111111 1111111111 1111 4444444444444444 111 222222222222222 111111 3333333333 11111 1 1 11 666666666666666 1111 11 111111111111 1111 7777777777777777777777 111 2222222222 999999999999999999999999999999999999999999999999999999999 333333333333333 333333333333 11 3333333 222222 222222 11 1 111 11111 11 3333333 111 222 22222222 11 11 1 111 333333333333333333 1 1 1 2222222 1 1
lowQualScore : 555555 9999 0 5 5 5 11 5 22222 0000 1 6666666666666666666666666 5 1 0 1 5 5 0 3 88888 6666 66 0 0 4 55 4 5 2 33333 00000 1 22222222 1 1111 5 66 3 3 3 111111 0 4 111111 3 1111111 555 7 777 0 0 4 5 0000 5 5 888 888 5 5 5 5 000 5 7 77777 6666 0 3 4 4 66 4 99999 55 4 777 1 55 1 777 4 6666 4 1 4 0 4 3 0 0 7777 2 2 222 3 3 3 1 2 3 4 2 999 7 111111 777 4 8 00000 0 3 4 1 000000 66 4 66 8 999 777 4 66 777 6666666666 5 3 77777 4 3 44 4 2 3333 3 77 55 3 4 6666666666666666 55 1 111 4 0 44 4 4 666 44 9999 1 0 1 4 4 777777777777777 777 5 66 5 77 5 0 6 666666 1111111111 1 66666 8 0 3 5 0 99 2 99 333333333333333 0 5 2222 77 33 77 888888888888 1 0 8 0 5 3 3 3 2 66 0000 6 6 9999999999999999999999 111 99 6 6 0000000000 666666666666666666666666666666666666666666666666666666666 5 3 555555555555555 6 2 6 1 6 555555555555 11 2222222 2 999999 3 2 3 9 444444 33 0 55 0 3 2 111 3 1 7 22222 2 22 22 0000000 888 333 3 88888888 0 88 7 6 1 22 0 111 1 888888888888888888 55 0 0 0 2 3333333 0 0 7
lowQualScore : ...... .... . . . . .. . ..... .... . ......................... . . . . . . . . ..... .... .. . . . .. . . . ..... ..... . ........ . .... . .. . . . ...... . . ...... . ....... ... . ... . . . . .... . . ... ... . . . . ... . . ..... .... . . . . .. . ..... .. . ... . .. . ... . .... . . . . . . . . .... . . ... . . . . . . . . ... . ...... ... . . ..... . . . . ...... .. . .. . ... ... . .. ... .......... . . ..... . . .. . . .... . .. .. . . ................ .. . ... . . .. . . ... .. .... . . . . . ............... ... . .. . .. . . . ...... .......... . ..... . . . . . .. . .. ............... . . .... .. .. .. ............ . . . . . . . . . .. .... . . ...................... ... .. . . .......... ......................................................... . . ............... . . . . . ............ .. ....... . ...... . . . . ...... .. . .. . . . ... . . . ..... . .. .. ....... ... ... . ........ . .. . . . .. . ... . .................. .. . . . . ....... . . .
lowQualScore : 888888 9999 2 9 0 0 99 0 55555 6666 4 6666666666666666666666666 0 4 4 4 0 0 1 4 33333 4444 11 9 8 4 44 4 0 5 66666 88888 1 44444444 1 2222 3 11 6 6 6 555555 5 0 111111 6 0000000 222 3 000 7 1 4 7 6666 0 0 888 333 7 7 7 7 000 7 9 22222 4444 8 3 4 4 11 0 88888 55 0 000 2 44 1 888 4 9999 4 9 4 9 4 6 4 9 2222 2 3 888 1 1 1 4 9 3 9 6 111 3 111111 000 0 6 00000 5 6 0 0 777777 33 4 11 9 888 888 4 11 888 7777777777 7 6 66666 0 9 11 0 3 4444 3 88 00 6 1 9999999999999999 00 1 000 0 7 88 4 4 222 66 4444 9 1 4 5 4 888888888888888 555 7 99 7 99 7 7 6 444444 3333333333 0 77777 0 8 3 6 6 00 5 22 111111111111111 8 7 1111 99 66 99 555555555555 4 8 0 7 7 6 6 6 3 33 6666 7 7 2222222222222222222222 777 22 7 7 5555555555 888888888888888888888888888888888888888888888888888888888 2 2 888888888888888 7 5 7 0 7 333333333333 00 2222222 5 222222 2 5 2 8 000000 88 0 88 2 2 5 000 2 0 0 00000 5 55 88 0000000 000 222 2 33333333 7 33 3 7 0 55 0 222 2 222222222222222222 00 0 0 0 5 8888888 0 0 0
consensus : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGACCT-CTGAGCCACNGACTGA-T-G--ACT-GAGC-----CA----AGGGCT--TG------------TCA------G-GAGATGTAACG-ACGACCA-GAGAAGAACTGCTTAAGTTTTGGA--AAAAGG-AAAA--GTCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCTTCTCCGACTTCAAAAA--TCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNTAA-TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGG-AATT-TGT-A---CGG-CTATACCAT-CA-CAT---NAGAAGG-T-AT-GCA--GTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CGGTTTG-----TACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATC-TTTCG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATTA-TTTCCCCGA--C---T--TC--G--AC-NTTTGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTCGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCACCTACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAAC-CGACTGGCTCTAT--CGAAATGACT---TA------A-G-TTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTAT--ACCG--TT--GGAAAG-TATTGAATAGAGCTATTCAAGAGTATCGT-CATCCACGAAATCGCG-CAAAGCGTTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAAC----TA------TGTA-A---TTTGG-CTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATA------TG------AAT-GGACAAGT-GGTGCTAT-TGTG---C---A-G--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTTTA--CA-TACTGTGTTGCTTCTGGTGATGAGCAGGGAAA-T-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
Reference ( family-1073 ) : NAAATGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGACCT-CTGAGCCACNGACTGA-T-G--ACT-GAGC-----CA----AGGGCT--TG------------TCA------G-GAGATGTAACG-ACGACCA-GAGAAGAACTGCTTAAGTTTTNGA--AAAAGG-AAAA--GTCGTATAAGGCTAGA-TCTGGN-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCTTCTCCGACTTCAAAAA--TCGCTTCACAAG-CTC----AGATGT---ATGTGATNGA--GCATT-ATCATG-AAGTAGACGAACAT-GCCTA------AATGCTGACACA-G---A-CGTAGTTTA-TGNTAA-TATCTCAA-GAGCTTTTT-TAGT---ATAACATTATCGGTAATACC-GACCGGTAAC----A-CTT-TTGCCC---TTC--GGCAC-CGG-AATT-TGT-A---CGG-CTATACCAT-CA-CAT---NAGAAGG-T-AT-GCA--GTAAAGAA-C-T-T-CTTTG--TGC-T---TACGG-ATCT---TTTGG-CAA---CTAC-AGGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTT-CTTATTGGTTCGAAATAGT-A-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAAACATT-TTC-GAGCAAT---TGCTTAG-CGGTTTG-----TACTCGTACCCGTTTTT-GGTC-ATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATC-TTTTG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCGAGATAGCGATATGCCAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---NATCTGCCAT-CA-CTTT--CAATTA-TTTCCCTGA--C---T--TC--G--AC-NTTTGCCTTGCCTGTTACA---GTC-ACAGGTCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACTCT----GTGCCAGTCAGAAATTTCTTTCTCCACCTACGAACTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAGTAAA-AA--TCTGCATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A---TA---ATANCT-----ACATTCTC-ACAGCGTTTCCTA-CCATTTTCACAAACAGTGGTCAA--CGACTGGCTCTAT--CGAAATGACT---T-------A-G-TTTAAAATTATGTGGAGCTG-AAGGCT----CGTGTTTAT--ACCG--TT--GGAAAG-TATTGAATAGAGCTATTCAAGAGTATCGT-CATCCACGAAATCGCG-CAAAGCGTTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-CCCTCGTA----CG-TCGTT-TAAAC----T-------TGTA-A---TTTGG-CTTAAT--GCTGATGACGAGCAG-CTAGATCC-G----CC--AGACT--TA---------G--AA-----TGGA---AAG---CGG-TA-------CA------GAGGGGATTGAATA------TG------AAT-GGACAAGT-GGTGCTAT-TGTG---C---A-A--GGAAC--TTATTGG--G--ATTAGATCA---C--GGTTCGTTATCTTTTA--CTTTA--CA-TACTGTGTTGCTTCTGGTGATGAGCAGGGAAA-T-GGAACTGATGAAGANGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-G-A-ATATTC--GATGA-T-ATGATCACATT--A-TCGAAGCGCGT--TAATGCTCAAANTTATGC-AAATTTG-TT-GTTTACATAC----AT-----TNA--T-TTGATTTGGA-AAC-GTATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTA
gi|1 : AAGTGCATGCTTAACTTTCGTTTCACTCTGATTT-----GGGTAGATCTTCTGAGCC-CTGACTGA-T-G--ACT-GAGCAAATTTA----AGGGTTAATG------------TCATGAACAG-GAGATAATACG-ACGACCAAGAGAAGAACTGCTTAAGTTTTTGGGGAAAAGA-AAAA--GTCGTAGAAGGCTAGACTCTTGC-GCAGTAT-GGTGGGTGTAGCAAGATGATACCCTTC--AAACTTCAAAAA--TTGCTTCACAAG-CTC----AGATGT---ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTTACATA-G---A-TGTAGTTTA-TGCT-A-T-TCTCAA-GAGCTTTTT-TAGT---GTAGCATTATTGGTAATACC-GACC-GTAAC----A-CTT-TTGTCC---TAT--AGCATGCGGAAATT-TGTAA---CGG-CCATACCAT-CATCATTAAGAGAGGG-T-AT-GCA--GTAAAGAA-C-T-T-CTTTG--TGC-T---TATGG-ATCT---TTTGG-CAA----TAC-AGGTCTTC-TA-TG-TGTTTAGTTAGCCATATTTT-GCTTCCAATTTTTTTACTTATTGGTTCAAAATAGT-A-ACCC-A-TG-TTCGTCA-CAGCAACAA-TGTTCGCAAATTGTCTT-TAATTG-AATATAGGAAAACATC-TTC-GA--AAT---TGCTTAG-CGA-TTG-----TACTCGTACCCGTATTT-GGTCAATCTGTCAATATA-----TGTGGT-ATGCATCTGGCAGAAATCTTTTTG--TACTT-TCATA-AAT---AC-GCTTCAAAAT--GAAAT---GCACACCAAGA-AGCGATTTACCAA---C-AGCTT-TAGCA-TTATC-ACGAATCATGA--GATCTGCTATACA-ATTT--CAATTATTTTCCCCGA---------TC------C-TTTTGCTTTGCCTGCTACA---GTC-A-AGGTCCATC-AAA-TTTTATCCGGC-ATCTTCGACGGACTCC----GTGCCAGTCAGAAATTTCTTTCT-CA-CTATGAACTG-TTCCA---------------GA-C-CATTATAATCT-CCCAA-T--AAGTGAATCA--TCTGCATTA-CCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-AT--TATCTATAGCT-----ACATTCTC-ACAG-GGTTCCTA-CCATTTTCACAAACAGTGGTCAAC-CAACTGGCTCTATCGCGAAATGACT---TAATATTAA-G-TTTAAAATTATGTGGAACTGTAAGGCT----CATGTTTAA--TTTGTTTT--GGAAAG-
gi|1 : gATCCATGAAATGGCG-CAAAGCATTATCACGCTGTGG-TACAATACA-CATTAC-ATATCCAATA-----TCGCA----CG-TTGTTATAAAC----TATCAGTTTGTACA---TTTGG-CGTAAT--GCTGATGACGAG-AG-CTAGATCT-G----CC--AGACT--TA---------G--A------TGG----------TGG-TA-------CA------GAGGGGATTGAAT-------TG------AATTGGACAAGT-GGTGCTAT-TGTG---CCCAA-G--GGAACAGTTATTTGACG--ATTAGATCA---CTAGGTTCGTTATCTTTTG--CCTTATACA-TACTGTGTTGCTTCTGGTGATGATCAGGGAAAAT-GGAACTAATGAGAGTGGGGATGAAGTGGA-A-A-TGAACAGT-CTGATCGAT-GTA-ATATTT--GATGA-TCATGATCACATTCAG-TTGAAGCGCGT--TAATGCTCAAATTTATGCTAAATTTG-TT-GTTTACATAC----AT-----TCA----TTAATTTGGA-AAC-ATATTACT-ACTCAAAATTAT----GC-AAAATTG-TTTAT-TTACAAGAATTGATATTTAatccatgaaatggcgcaaagcattatcacgctgtggtacaatacacattacatatccaatatcgcacgttgttataaactatcagtttgtacatttggcgtaatgctgatgacgagagctagatctgccagacttagatggtggtacagaggggattgaattgaattggacaagtggtgctattgtgcccaagggaacagttatttgacgattagatcactaggttcgttatcttttgccttatacatactgtgttgcttctggtgatgatcagggaaaatggaactaatgagagtggggatgaagtggaaatgaacagtctgatcgatgtaatatttgatgatcatgatcacattcagttgaagcgcgttaatgctcaaatttatgctaaatttgttgtttacatacattcattaatttggaaacatattactactcaaaattatgcaaaattgtttatttacaagaattgatattta
gi|10 : gaagtgcatgcttaactttcgtttcactctgatttgggtagatcttctgagccctgactgatgactgagcaaatttaagggttaatgtcatgaacaggagataatacgacgaccaagagaagaactgcttaagtttttggggaaaagaaaaagtcgtagaaggctagactcttgcgcagtatggtgggtgtagcaagatgatacccttcaaacttcaaaaattgcttcacaagctcagatgtatgtgatcgagcattatcataaagtagacgaacatgcctaaatgcttacatagatgtagtttatgctattctcaagagcttttttagtgtagcattattggtaataccgaccgtaacacttttgtcctatagcatgcggaaatttgtaacggccataccatcatcattaagagagggtatgcagtaaagaacttctttgtgcttatggatcttttggcaatacaggtcttctatgtgtttagttagccatattttgcttccaatttttttacttattggttcaaaatagtaacccatgttcgtcacagcaacaatgttcgcaaattgtctttaattgaatataggaaaacatcttcgaaattgcttagcgattgtactcgtacccgtatttggtcaatctgtcaatatatgtggtatgcatctggcagaaatctttttgtactttcataaatacgcttcaaaatgaaatgcacaccaagaagcgatttaccaacagctttagcattatcacgaatcatgagatctgctatacaatttcaattattttccccgatccttttgctttgcctgctacagtcaaggtccatcaaattttatccggcatcttcgacggactccgtgccagtcagaaatttctttctcactatgaactgttccagaccattataatctcccaataagtgaatcatctgcattaccgaatcacttagttttgtgctaacttttatataagctttattatctatagctacattctcacagggttcctaccattttcacaaacagtggtcaaccaactggctctatcgcgaaatgacttaatattaagtttaaaattatgtggaactgtaaggctcatgtttaatttgttttggaaagACTTCT-CGCAATT--AAGTAAA-CA---CTGCATTT-CTGAATCACTGAGCTTTATGCTAACTT--A------TATAAGCTTT-AA--TT---AGATCT-----ACATTCTC-ACAGCATTTCCTAGCCATTTTCACAA-CAGTGGTCAA--CGAATGGCTCTAT--CGAAATGACT---T-------ATG-TTTAAAACTATGTGGAGCTG-AAGGCT----CGTATTTATTTATTT--TTTTGAAAAG-TA----AC---GCTTTTCAAGATTATCAT-CATCCATGAAATTGCG-CAAAGCGTTTTCGCGCTGTGG-TACAATACA-CATGAC-ATATTCAACAG-CCCTCGTA----CG-TCG-T-TAAA----------------A-G---TTTGG-CTTAAT--GCTGATGACAAGCAG-CTAGATCC-C----TC--AGACT--TGGAAGGGAATG--AA-----TGGA---AAGT--TGG-TA-------CA------GA-GGGATTGAATA------TG------AAT-GGACAAAT-GAAGTTAT-TGTG---
gi|11 : CATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGG-----TAA---ACGGACAGAAT-GTCACA-GGAC-----AA----AAAG----TC------------ACA------G-GACATA-AAAG-ACGACCA-GAGAAGAACTGCTTAAGTTTTTG----------------GCC----AAGGCTAGA-TCTGGC-G-AGTAT-GGTGGGTGTGGCAAGACGGTACCCTTCTCCAACTTCAAAAA--TTGCTTCACAAG-CTC----AGATGT---ACGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCCA------AATGCTGACATA-G---A-TGTAGTTTA-TGCTAA-TATCTCAA-GAGCTTTTT-TAGT---ATAGCA-TATTTGTAATACCAGGCCGGTAAC----A-CTT-TTGCCC---TTTTAGGCAT-CGT-AATT-TGT-A---CAG-CTATACCAT-CA-CAT---TAGAAGG-T-AT-GCA--GTAAAGAA-C-T-T-CATTG--TGC-T---TACGG-AT
gi|12 : TTTTT-CATACTGGTTCAAAATAGT-G-ACCC-AATGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTGGTGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CGGTTTG-----TACTTGTACCCATTTTTTGGTC-ATCTGTCTATATA-----TGTGGT-ATCCATCTGGCAGAAATC-TTTCG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TATCTTT--CAATTA-CTTCCCAGAGTT---T--TCAAG--ACATTTTGCCTTGCCTGTTACA---ATCAATAGGTCGGCC-AGA-TTTTG--CAGTAATCTTTGACAGACTCT----GTG------AGA---TTCTTTCTCAACTGACGAACTG-TCCCA---------------
gi|13 : aAAATGCATGCTTAACTTTCGTTTCACTCTGATT------GGGTAGACTT-CTGAGCCACAGACTAA-T-G--ACT-AAAC-----CA----AGGGCT--TG------------TCA------G-GAGATGTAACG-ACGACCA-GAGAAAAACTGCTTAAGTTTTGGA--AAAAGGAAAAA--GTCGTATAAGGCTAGA-ACTGGC-G-AGTAT-GGTGGATGTGGCAAGACGGTACCCTTCTCCGACTTCAAAAA---------GCA-------------------ATTTGATCGA--GCATT-ATCATA-GAGTAGACGAACAT-ACCTAAAATTTAATGCTGACATA-G---A-TGTAGTTTA-TGCTAA-TATCTCAA-CAGCTTTTTATAGTATAATAACA-TATCGGTAATACC-GACCGGTAGC----A-CTT-TTGCCC---T
gi|14 : aAAATGCATGCTTAACTTACGTTTCACTCTGATTT-----GGGTAGACCT-CTGAGCCACTGACTGA-T-G--ACT-GAGC-----CA----AGGGCT--TG------------TCA------G-GAAATGTAAAG-ACGACCA-GAGAATATCTGATTAAGTTTAAGA--AAAAGA-AAAA--TTCGTATAAGGCTAGC-TCTGGC-G-AGTAC-GGTGAGTGCGGCAAGACGGTACCCTTCTCAGACTTTTAAAA--TTGCTTCACAAG---C----A--------ATGTGATCGA--GCATT-ATCATA-AAGTAGACGAACAT-GCCTA------AATGCTGATATA-G---A-TGCAGTTTA-TGCTAA-TATCTCAA-AAGCTTTTT-TAGT---ATAGCAT
gi|15 : TGGTTCAAAATAGT-G-ACCCCA-TGTTTTATCACCAGTAACAA-TGTTTGTAAATTGTCTG-TGATTG-GATTTTGGAA----TTGTTCTGAGCAAT---TGCTTAG-CGGTTTG-----TACTTGTACCCATTTTT-GGTC-ATCTGTCTATACA-----TGTGGT-ATCCATCTGGCAGAAATC-TTTCG--TACTTCTCA-ACAAT---AC-GCTTCAAAAT--GAAAT---GCAT-TTGCGATAGCGATATGCCAA---C-AACTT-TGGCA-ATATC-ACGAATCTTG---CATCTGCCAT-TA-CTTT--CAATTA-CTTCCCAGAGTT---T--TCA-G--AC-ATTTGCCTTGCCTGTTACA---ATC-ATA
gi|16 : cAAACTGC-G-ATCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCG-CAGTTTGCAAA---TT-TTC-----AATATATATTTGG-CCATCTT-----TACGCGGATTCTTTTCT-GATC-ATTTGTCAGCAAA-----TGTGGT-ATCCATCTTGCATTTATC-TTTCGGAGACCT-----A-AAT---GCTTTTTCAAAATTGAAAATATGGTTC-CCGA-----TGATATATCAA---CTAAATT-T-GCA-ATACC-TC---TTGTGGTCAATCACCCAT-CGTCATTAACAATTT-TTT
gi|17 : cCCAA-CCATTTCTACAA-CAGTGGACAA--CGACTGTCTCTAT--TTGAATGACTGTAT-------A-ACTTTAAAACTATGTAGAGCTG-AAGGTT----CGTATTTAT--AACG--TT--GGAAAGGTATTGAATAGGGATATTCAAGAGTA-CATGTATCCACGAAATCGTG-CAAAGCGTTATCGAGCCATGG-TATAATATA-CCTTAC-ATATCAAAtttaaatttgttca
gi|18 : CCACCTATGAACTGGTCCCA---------------GGCCTCATTAACTTCT-CCCAATT--AAAGAAA-AAAATCTGCATTATCCGAATCACTTAGTTTTGTGCTAACTTTTA------TATAAGCTTT-A--------ATATCT-----ACATTCTC-ACAGCGTTTTCTA-ACATTTTCAACAACAGTGGTCAACCCGA-TGGCTCTAT--CGAAATGATT---
gi|19 : CATTCGAAAACTTCATTCTTTACCTACGAACTG-TCTCATAACATACCATATCAGACC-CATAAACTTCAACTTAATTTTCAGTAAA-AA--TCTGCATTA-CCGAATGATTGAGTTTTGTGCTAACTTTTATTCATGTATCA-CTTC-----TA---ATTCCTTATAAATATTCTCGAC-TCGTTTTCTA-aa
gi|2 : CATAGTTT-GCTTCCAGTTGTTTT---TATTGGATCAAA-----------------TTTCGTAACCAGCAACAA-TGTTTGCAAATTGTCTT-TGATTG-AATTTAGGAAACCTTT-TTA-AA--AAT---TGCTTAG-CGGATAG-----TACTCATACTCGTTTTT-GGTC-TTCTACCAATATA-----TGCGGT-ATGTATCTAGCAGAAATA-TTTTG--TACTT-TCA-A-A-C---AT-GCTTCAAAAT--GAAAT---GC--------------------CAA---C-AGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAC-TA-TTTT--CAATTA-TTTCCCTGA--C----------------GTTTGCCTTGCCTGTAACA---GTC-ACAGGACCGCC-AGA-TTTTG--CCAC-ATCTTTGACAGACTCA----GTGCCAGTCAGAAATTTCTTTCTCCACCTATGAACTG-CCCCA---------------GACC-CATTAATTTCT-CCCAATT--AAATAAA-AA--TCAGTATTA-CCGAATCACTGAGTTTTGTGCTAACTTTTA------TATAAGCTTT-ACGGTA---ATAACT-----ACATTCTC-ACAGCTTTTCTCAGCCATTTTAAC-AACAGTGGTCAA--TGACTGGCTCTAC--TGAAATGACTA--TA------A-G-TTTAAAATTATGTGGAGCTG-AAGGCT----TGTGTTTAT--ACTGT-TT--GAAAAG-TATTGAATAGAGCTTTTCAAGAGTATCGT-CATCCACCAAATCGTG-CAAAACATTATCGCGCTGTGG-TACAATACA-CATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-TAAACT---T-------TGNN-N---NNNNN-NNNATT--AC--ATATCGAACAGTCCACGTAC-GTCGTTC--AAACT--TT---------GCTGA-----TGAC---AAG---CAGCTAGATCCCCCAGACTTGGAAGGGAGTGGATGGAAAGTTGGTGCACAGG-GGACAAAT-GGCGCTAT-TGTGC--C---ACA--GGAAC--TTATTGac
gi|2 : CTTTGN-NNNNNNNNN-NATTAC-ATATCGAACAG-TCCACGTA----CG-TCGTT-CAAAC----T-------T-------------------T--GCTGATGACAAGCAG-CTAGATCC-C----CC--AGACT--TG---------G--AA------------------------------------------GGGA------G------TG------GAT-GGA-AAGTTGGTGC-------A---C---A-G--GGGAC--AAATGGC--GCTATTGTGCCA---C--AG---G--AACTT--A---TTGA--CA-TAATATGT-GCTTCTGGTAATGAGCAGGGAAA-T-GGAACTGATGAAGATGGGGATGGAGTGGA-A-A-TGAACAAT-CTGATCGAT-T-AGATATTA--GATGATT-ATGATCAacataatatgtgcttctggtaatgagcagggaaatggaactgatgaagatggggatggagtggaaatgaacaatctgatcgattagatattagatgattatgatcatgatgatgactgatttgataatgctcactttattactgatttg
gi|20 : catagtttgcttccagttgtttttattggatcaaatttcgtaaccagcaacaatgtttgcaaattgtctttgattgaatttaggaaacctttttaaaaattgcttagcggatagtactcatactcgtttttggtcttctaccaatatatgcggtatgtatctagcagaaatattttgtactttcaaacatgcttcaaaatgaaatgccaacagctttggcaatatcacgaatcgtgtatctgccactattttcaattatttccctgacgtttgccttgcctgtaacagtcacaggaccgccagattttgccacatctttgacagactcagtgccagtcagaaatttctttctccacctatgaactgccccagacccattaatttctcccaattaaataaaaatcagtattaccgaatcactgagttttgtgctaacttttatataagctttacggtaataactacattctcacagcttttctcagccattttaacaacagtggtcaatgactggctctactgaaatgactataagtttaaaattatgtggagctgaaggcttgtgtttatactgtttgaaaagtattgaatagagcttttcaagagtatcgtcatccaccaaatcgtgcaaaacattatcgcgctgtggtacaatacacattacatatcgaacagtccacgtacgtcgtttaaa-CAT---GAAAAGAAT-AT-GTA--ATAAAGAA-C-CGT-CTTTG--TGC-T---GATGA-TTCT---TTTGG-CAA---CTAT-AGGCCTTC-TACTG-TATTTAGTTAGCCATATTAT-GTTTCCAATTTTCT---TTATTGCTTCGAAATAGTAA-ACTC-A-TGTTTTGTCCTCAGCAACGA-TGTTAGTAAATTATCTT-Ttgatgatgactgatttgataatgctcactttattactgatttg
gi|21 : AGAA-C-T-TTCTTTG--TGC-T---C-TGGCATAT---TCTTG-CTA---TTCCTTGACGTTC-C-CCT-TGTTCAGTCACCCACACCTT-G---TCAATTTTTCT-TTGA--GTTTCAAAGTAGT-GTACCC-A-CGTTTCATCACCTGTAACTA-TTTCTGATAATCGACGT-GGATCGCAGTTT
gi|22 : tgcTACCCGTATTT-GGTC-ATCTGTCAATATACCGTATGTGAT-GTGCATCTGGCAGAAATC-TTTTG--TACTT-TCA-A-AAT---AC-GCTTCAAAAT--GAAAT---GCAC-CCAAGATAGCGATATGCCAA---C-AGCTT-CAACA-TTATC-ACGAACCATG---GATCTGCTAT-C
gi|23 : aGTAATTCC-GACCAGTAACGAAAA-CCTGTTACCCGGCTTC--GACAC-CGG-AATTATGT-ACCGCAG-CTATAACA
gi|24 : AATT--CACTAAA-AA--TCTGCATTA-CCGAATGATTAAGTTTTGTACGAACGTTTA------TATAAGCTCTAA---TA---Aataaacggggaggagaatataacaataacaatccttattatagtggagtctatgaaggttcatttg
gi|24 : GACTGGCTTTAT--TGAAATGACT---------------------ATTA-GTGAAGCTG-AAGGCT----CATGTTTAT--ACTG--TT--GGAAAgactggctttattgaaatgactattagtgaagctgaaggctcatgtttatactgttggaaa
gi|25 : aattcactaaaaatctgcattaccgaatgattaagttttgtacgaacgtttatataagctctaataaTTTCACTCTGATTTTATTTGGGTAGACCT-CGGAGCCAC----TGA-TCG--ACT-GAGC-----CA----AGG-------------------------------AGATGTAACG-ATAACCA-GAGAAGAACTTCTTAAGTTT----------------A--GTCGTGTAAGGCTAGA-TCTGGA-G-AGTA
gi|26 : AGATG-AAGGCTGAGACGTGTTTAT--ACCG--TT--AGAA--------------GCTATTCAACAGTATCGT-CATCCGCGAAATCGTGCCAAAGCATTATGGCGCTGTGA-TACAATACATTATTAC-ACATCGAACAG-CCCT
gi|27 : CTGCCAT-CA-CTTT--CAATTA-TTTCCCTGA--A---T--TT--GGGAC-ATTATCCTTGCCTGTTACA---GTA-ACAGGTCGGCC-AGA-TTGTG--CTGC-ATCTTTGATGGACTCT----GTGCCAGCCAGAAATT
gi|28 : AAAGTTATGC-AAATTTG-TTTGTTTACATACTTTAAT-----TAA--TGTTAATTTG-A-AAC-GTATCACT-ACTCAAAACTATATATGC-AAACTTG-TTTAT-TTGCATGAATTGATATTTAct
gi|29 : TG-AAGGCT----CATGTTTAT--ACCA--TT--GGAAAGGTATTGAGTAGAGCTAATCAAGAGTATCAT-CATCCACAAAATTGTG-CACAATATTATTGTGGCGTGG-TACAATACA-CATTAC-c
gi|3 : TGATTT-----GGGTAGA-------AGTTGGAGA-TGA-T-G--A-T-GAGC-----TATTTAAGGGCT--TAAAATTGTAATGATAA------G-GAGATGTAAAG-----TCA-GAGA-GAA-TGATTTAGTTTTGGA--AAAGG---AAA--GT-GTATAAGG-TAG--TATGGT-G-AGT-T-GGTGGGTGTGG-AAGACGATA------TTTAAATTTAAAAACATTGATT---AAG--TA----AGATGT----TGTG-TGGA--G-ATT-ATAAAA-AAGTAGACGAA--T-GC----------ATG-TGA---A-G---A-TGTAGTGTA-TGA-----GTTTAAA-GAGTTTTTTGTATT---ATTAGAATATTGGTA-TA---GAA-GGTAAA----G---T-TTGAAT---TTA--GGT-----G-GATT-TGT-A---CGG--TATA--AT-AA--AT----AGA-GG-T-AT-GTA--GTAA-GA----T-T-TTTTG--TG--T---TATGG-AT------TTGG---A-----AT-AG---TTA-TATCG-TGTTTAATTAG--ATATTTT-GTT---AAAATTTTT-ATTATTAGTT---AAT-GT-A-A----A-TGTTT--------GTAAAGACTGTTTG-AAATTGTTTT---ATTG-AATATAGGAA---ATT-TT---AGAAAT---TG-TTAG--GG-TTG-----TA-TAGTA-ATGTATTT-GGT--ATCTGT-AATAT------TGTGGT--TG-A--TGG-AGAAATT-TTTTG--T--TT-T---A-AAT---AT-GTT---AAAT--GAAAT---GAA-----AGA-AG-GATTTGCAAATATT-AGATTATAG-A-ATAT------ATTGTG---TAT-----AT-TA-ATTT--TAA---------CTGA--T---T--TT--G--AA-A-TTG-------TGATA-A---GT--AAAGGT----T-AGA-TTTT----TTA-ATGTTGAAAGGA---T----A-GGAAGTCAG--ATTTTTT-----A--TATGAA-TG-T---A---------------GG---CATTAATTT-------AT----AGTAAA-AA--TATGTA------AGATAATT-AGTTTTGTG-TAA-TTTTA------TATAAGATTA-A---TA---TTATTT-----
gi|30 : TAAGTTTTGAA--AAAAGG-AAAAAGGTTGCATGGGGCGAAA-TTTGGAAG-AGTAT-GATGGGTATGGCAAGACAGTAACCTTCAATGACTTCAAAAA--TTGCTTCACACG-CTC----A
gi|31 : ACAAGACTC----AGATGCTCCATGTGGTGGGAGGCATT-ATCATGGAAGTTGACGAACAT-GCCTA------AATCCT-ATTTA-T---A-AATAACTTA-T-ATAA--ATCTT---GAGCTTTTT-T
gi|32 : GTCAT-TGCTTG-AATTTAG-AAAATATT-TTG-GGG-AAT---TGCATAG-TGAACTG-----TACTCTTGCCCGTTTTT-GATC-ACCTGTCAATATA-----TCCGGA-ATGCATCAGGCAGAtg
gi|33 : -CA-CAT---TAGAAGG-T-AT-GCA--GTAAAGAA-C-C-C-CTTTG--TGC-T---TACGG-ATGT---TTTGG-CAA---TTAC-AGTTCTTC-TATCG-TGTTTATTTAGCCATATTTT-GCTTCCAA
gi|34 : -ATCATG-AAGTAGACGAACAT-GCCTA------AATCCGGACACA-G---G-CATCGTTTA-TGAC-A-TTTCTTA---AGCTTTTT-AAGT---ATAACATC-TCGGTAATACC-GACCTGTA
gi|35 : ATCTGCCAC-CG-CTCT--CGATTA-TTTCCCC------------C--G--AC-TGTTGCCTTGCCTGTTACA---GTC-ACA-------------TTTTG--CTGA-ATCTTTGACGGTCTCT----GTGTCAGTCAAA
gi|36 : cT-GCTTCCAATTTTT---CTTATTGG------------A-ACCT-A-TGTTTCGTCACCAGCA-CAA-TGTTTGCAAATTGCCTT-TAATTG-AATTTAGG-AAACAAT-TTC-t
gi|37 : TT-CTTATTGGTTCGAAATCGTGA-ATCC-A-TATATCGTCACCAGTAACGA-TGTTTGCAAATTGTCTT-TGATTa
gi|38 : tgaACTTCAAAAA--TCGCTTCACAAC-CTCTGTCAGATGT---ATATTGTGGA--GCATT-ATCATG-AAGTAGACGAACAT-G
gi|39 : CGTTATCGCACTGTGG-TACAATACC-CATTAC-CCATCAGACAA-CCCTCGTA----
gi|4 : acGATTT-----AGGTTGACTT-CCGAGGCACCGACTGA-T-G--GCT-GAGC-----CA----AAGGCT--TG------------TCG------G-GACTTGTAATG-ACGACCA-AA-----------TA---TTTGGA--AAAA------A--GTTGCATGAGGCTAGA-CCTGGA-G-AGTAT-GGTGGGTGTGGCAAGACGGTAACCT---CCG-------------------ACGA--CT--------TG------GTAATGGA--GCATT-ATCATG-AAGTAGACGAGTAT-GCCTA------AATCCTGATACACG---G-CGTCGTTT---GATAT-T-TCTTGA-GA---TTTT-TAGT---ATAA-AGTCTCGGTGATACC-GACCTGCAAA----A-CTT-TTGACC---TTC--GGCAC-CAG-AATT-TAT-A---TGG-CTATACTAT--------------------AT-GCA--ATGAAGAA-CAT-T-CTTTG--TGCATGCGTATGG-TTCT---TTTGG-CAAGTTCTAG-AAGCCTTC-TACCG-TGTTTAGTTAGCCATATTTT-GTTTCCAATTTTT---CATACCGGTTCGAAATAGTGA-ACCC-A-TGTTTCGTCACCAGTAACAA-TGTTTGCAAATTGTCTT-TGATTG--ATTTTGAGAAACATT-TT--GAGCAAT---TGCTTAG-CAATTTGTATAATACTCATACACGGTTTT-G
gi|4 : ATGTCAA---A-GGCTT-TGGCA-ATATC-ACGAATCGTG---TATCTGCCAT-CA-CTTT--CAATTA-TTTCCCTGA--CCTTT--TA--A--AC-AT--GGCTTGCCTGA-ACAA--GTC-ACAGATCGGCC-AGA-TTTTG--CTGC-ATCTTTGACGGACCCT----ATGCCAGTCAGAAAATTCTTTCTCCACCTACGAGTTA-TCTCA---------------tgttgttgtttcgtttgcttgtttgtttgtttcaaatgtcaaaggctttggcaatatcacgaatcgtgtatctgccatcactttcaattatttccctgaccttttaaacatggcttgcctgaacaagtcacagatcggccagattttgctgcatctttgacggaccctatgccagtcagaaaattctttctccacctacgagttatctca
gi|41 : gatttaggttgacttccgaggcaccgactgatggctgagccaaaggcttgtcgggacttgtaatgacgaccaaatatttggaaaaaagttgcatgaggctagacctggagagtatggtgggtgtggcaagacggtaacctccgacgacttggtaatggagcattatcatgaagtagacgagtatgcctaaatcctgatacacggcgtcgtttgatatttcttgagatttttagtataaagtctcggtgataccgacctgcaaaacttttgaccttcggcaccagaatttatatggctatactatatgcaatgaagaacattctttgtgcatgcgtatggttcttttggcaagttctagaagccttctaccgtgtttagttagccatattttgtttccaatttttcataccggttcgaaatagtgaacccatgtttcgtcaccagtaacaatgtttgcaaattgtctttgattgattttgagaaacattttgagcaattgcttagcaatttgtataatactcatacacggttttgtgttgttgtttcgtttgcttgtttgtttgtttcaa-TACAACACA-CATTAC-ATATCGAACAG-CCCTCGTA----
gi|42 : GTAGTTTAATGCTAG-TATCTCAAAGAGCTTTTT-TGGC---ATAACATttcttccgtgttta
gi|43 : tTATGAATTG-TCCCA---------------GACC-CATTAACTTCT-CCCAATT--AAa
gi|5 : -ACCATG-AAGTAGATGAACAT-GCCAA------AATACTGACACA-G---GGTGTTGTTTA-TGGCAAGTAGTTCTT-GAGCGTTTT-TAAT---ATAACAT-ATCAGTAATACC-GACATGTAAC----A-CTG-TTGCCC---TTC--GGCAC-CGG-AATT-AGT-A---CGG-CTTTACCAT-CA-CAT---GAGGAGAAT-AT-GCA--ATAAAGAA-C-----CTTTG--TGC-C---TATGG-TTCT---TTTGG-CAA---CTAC-AGACCTTC-TGCCG-TGTTTAGTTAGCCATATTTT-ATTTCCAA--TTTTT-ATTACTGGTTCGTAATAGTGA-ACGC-A-TGTTTTGTCACCAGTAATAA-TGTTTGCAAAC--CTTT-TGGTTG-AATTT-GGGAAACATG-TT--GAGCAAT---TGTTT----GGTTTG-----TACTCGTACCCGTTTTT-AGTC-ATC---------------TGTGAT-------------GAAG----TTCG--TACTT-TCA-----------------AAGAT------T---GCTC-CCGCGATAG--------------C-AGTTT-TAGCA-GTATC-A---------------CTACCAT-AA-CGTT--CAATTA-TTTCTCTGG--C---TTGTA--G--AC-ATTTGCCATGCCCGTAACAGTCGTC-ACAGTTCGACT-AGA-TTTTG--CTGC-ATCTTTCACAGACTTTACAGGTGTCAGTCAAAATTTTCTCTCTCCATCTACGAACTG-TCTCA---------------
gi|6 : -CAAAGCATTATCGCGCTGTGGGTACAATACA-CATTACGATATCCAACAGGCCCTCGCAAGCACGGTCGTT-TAAAC----TATGAAGTTGTA-ACATTTTGGGCTTAATCCGCTGATGACGAACAG-CTAGATTCTG----CCGCAGACT--TA---------G--AAGAGAATGAATGTAAGAGATGG-TA-------CAT-----GAGGGGATTGAATA------TG------AAT-GGACAAGT-GGTGCTAT-TGTGCCAC---A-G--GAAAC--TTATT----G--ACTAGATCAAGCT--GTTTCGTTATCTTTTAACCTTTA--CAGTACTGTGGTGCTTCTGGTGATGAGCAGGGAAA-TGGGAACTAATGAAGAAGGGGATGAAATGGATA-ATTGAACAGTCCTGATCAA----A-----TC--AATGA---ATCACCGCATC--AGTCGAAGCGCGTTGTAATGCTCAGAATTATGC-AAATTTGTTT-ATTTACAAAC----ATTCATATAA--T-TTGATTTGGATAACGGTATTACTAACTCAAAATTAT----GCAAAAATTG-TTTATGTTACAAGAATTGATATT
gi|7 : aTGTGG-T-TAATA----ATTA--ATAT-AAAGAG--------A----TG-TGATT-TAAATATAGTG------TGTA-A---TTTGG--TTAAT--GATGATGA-GAG-AG-CTAGATTA-G----AT--AGAGAGATA---------G--AA-----TGGA---AAG---GGG-TA-------AA------GAGGG--TTGAATA--------------GAT-G---AAGT-GGTG-TATATGTG---C---A-GATGGAA---TTATTAG--A--ATAAGAT-A---T--GGTTAGTTA--TTTAA--ATTTA--AA-T----TGTTGATT-TGGTGATGAGGAAGGGAA-T-GGA--TGATGAAGAAGGGGATG-AGTGGA-ATA-TGAA-AGT--TGAT--ATGG-A-ATATTTTGGATAA-T-ATG-TCA---T--A-TTGAAGAGCGT--T-ATGAT-AAATTTATG--AAATTTG-TT-A-TTAAACAT----AT-----TTAATT-TTGCTTT-GA-AAC-GTATTATT-A---AAAATTAT----G---AAATTGTTTTAT-TT--AAGAATTGATATTT
gi|8 : taattttatataagattaatattatttaggtttataagaattttaaaaagtggtaaagatggttatgaaatgatgaaaaaattgaaaagatatggAAATGCATGCTTAATCTCAGTT--ACTC--GTTT-----GAGTAGCCGT-CTGAGTCACTGACTGA-T-GC-GCTTGAGC-----CA----AGGGCT--TC------------TTC------GTGACTTGTAACGTAAGACCA-GATCAGA-CTTCTTAAGTTTT-GA--AAAAAG-AAAA--GTTGT-TAAGGCTAGA-ACTGGA-G-AGTATTGGTGGGTATGGCAAGGCGGTGCC--------------------TC-CTTCACAAG-TTC----AGATGT---ATATGAT-GA--ACATTAATCATA-AAGTAGACAAACATGGCCTA------AATGCTGACACA-GGGCA-AATCGTTTA-TG---A-TATTTCTA-GA-----------T---AT-ACA-TATCGATAATACC-AACCGGTAAT----ACCTT-TTCCCC---TTT--GGCAC-CGG-ACTT-GTT-A---CGGCCTATA-CATCCA-TAT---TAGAAGGAT-AT-GCA--ATAAAGAACC-T-T-CTTTG--TGC-T---TATGG-TTCTGGCGTTGG-CAA---CTAC-A-GCATTC-TACCG-TA-TTATCTAACCATA-TTT-GCCTCCA---TTTTT-CTT
gi|9 : aAAAAGG-TTATTGCATAGTAAAGAA-C-T-TTCTTTAGTTGT-T---TACTG-ATCT---TTTGGGCAAG--CTAC-AGGTCTTCCTATCGGTGTTTAATTAGCCATATTTTTGCTTCCAATTTTTTC-TTAATTGGTTCAAAATAGT-A-ACCC-A-TGTTTCGTCAACAGCAACAA-TGTTTGCCACTTGTCTT-TAATTG-AATATAGG-AAACATT-TTC-AAGAAAT---TGCTTAGTCGAATTG-----T-CTCGTACCCGTATTT-GGTC-A-------------------TGGTAATGCATCTGGCAGAAATC-TTTTG--TACTT-TCA-A-AATAAAAT-GCTTCAAAAT--GAAAT---GCAC-CCAAGA-AGCGATTTGCCA------AGCTT-TTACATCTATCAACGAATCATA---GATCTGCTAT-CA--TTT--CAATTA-TTTCCC-------------C--G--AC-TTTTGCATTGCCTGCTACA---GTC-ACCGGTCCATCAAGATTTTTC--CTAA-ATGTTCGACGGACTCC----GTGCCAGTTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|40 ): AGATACTTTATCATACCAATGCTTTGACTAAACTTGCTGAAACTTTGTA
Unaligned ( gi|44 ): GTAACACATAATCTTTTAAAGATTTGATTGTAA