lowQualScore                  :                                            111                                                                                        1  
lowQualScore                  :                                            444      0                9                 4                                              1  
lowQualScore                  :                                            ...      .                .                 .                                              .  
lowQualScore                  :                                            000      8                3                 5                                              0  
consensus                     :                                AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGG
Reference ( gi|26577 )        :                                AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCTGG
gi|26578                      :                                AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAA-GTC-GGCCACAAGGCTCTGATTCCCTCAAACTGTTGTC-AGCACAATGTCAGG
gi|26579                      :                                AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACT-CTGTCAAGCACAATGTC--TCCACAA-GCTCT-ATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGc
gi|26585                      :                                AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAATGTCAGGCc
gi|26584                      :        attccctcaaactgttgcaagcacAATGTCAGGCCA---CAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCAGGC
gi|26588                      :       attccctcaaactcttgtcaagcacAATGTCAGGCCA---CAA-GCTCTGATTCC--CAAACTCTTGTCAAGCACAATGTCTGG
gi|26576                      :        attccctcaaactgttgtcagcacAAT-TTAGGCCATCACAACAC----ACTCCCTAAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATT-CCTCAAACTCTTGTCAAGCACAATGTCAGG
gi|26575                      :                              aaAAT-TTAGGCCATCACAACAC----ACTCCCTAAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATT-CCTCAAACTCTTGTCAAGCACAATGTCAGGc
gi|26574                      :                              aaAAT-TTAGGCCATCACAACAC----ACTCCCTAAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATT-CCTCAAACTCTTGTCAAGCACAATGTCAGGc
gi|26582                      :                              aaAATGTCAGGCCA---CAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCAGGCc
gi|26583                      : cacaagacaccctcaaactcttgtcaagcacAATGTCAGGCCA---CAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTC-GGC
gi|26587                      : cacaagacaccctcaaactcttgtcaagcacAATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAA-GTC-GGC
gi|26586                      :       attccttcaaactcttatcaagcacAATGTC-GGCCA---CAAGGCTCTGATTCCCTCAAACTGTTG-CAAGCACAATGTCAGGC
gi|26580                      :       attccttcaaactcttatcaagcacAATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCTGGGCACAAGGCTCCG
gi|26581                      :                                AATGTCAGGCCA---CAAG-CTCTGATTCCC--AAACTCTTGTCAAGCACAATGTCTGGGCACAAGGCTCCGTTT
gi|26589                      :                                AATGTCAGGCCA---CAAGGCTCTGAgaactccccaa
gi|26585                      :                                attccttcaaactcttatcaagcacATTCCCTCAAACTGTTG-CAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAATGTCAGG
gi|26584                      :                                                         ATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCAGGc
gi|26588                      :                                                         ATTCCCTCAAACTGTTGTCA-GCACAATGTCAGGCCACAAG-CTCTGATTCCC--AAACTCTTGTCAAGCACAATGTCTGGc
gi|26587                      :                                                         ATTCCTTCAAACTCTTATCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAA-GTC
gi|26586                      :                                                         ATTCCTTCAAACTCTTATCAAGCACAATGTC-GGCCACAAGGCTCTGATTCCCTCAAACTGTTG-CAAGCACAATGTCAGGggc
gi|26589                      :                                                         ATTCCTTCAAACTCTTATCAAGCACAATGTCAGGCCACAAGGCTCTGAc
gi|26582                      :                                                            CCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCAGG
gi|26583                      :                                                   cacaagacaCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCc
gi|26580                      :                                                                         cacaagacaAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCTGGggc
gi|26581                      :                                                                                  AATGTCAGGCCACAAG-CTCTGATTCCC--AAACTCTTGTCAAGCACAATGTCTGGgcacaaggctccg
gi|26589                      :                                                                                                        ATTCCTTCAAACTCTTATCAAGCACAATGTCAGGgcacaaggctccgtttgaactccccaa

lowQualScore                  :               222                                                                                           
lowQualScore                  :      8        666    2 9                                  3                  1                              
lowQualScore                  :      .        ...    . .                                  .                  .                              
lowQualScore                  :      8        222    2 4                                  4                  5                              
consensus                     :   AATGTCAGGCCATCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGG
Reference ( family-873 )      :   AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGG
gi|26574                      :   AAT-TTAGGCCATCACAACAC----ACTCCCTAAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATT-CCTCAAACTCTTGTCAAGCACAATGTCAGG
gi|26575                      : aaAAT-TTAGGCCATCACAACAC----ACTCCCTAAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATT-CCTCAAACTCTTGTCAAGCACAATGTCAGGc
gi|26576                      : aaAAT-TTAGGCCATCACAACAC----ACTCCCTAAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATT-CCTCAAACTCTTGTCAAGCACAATGTCAGGc
gi|26577                      : aaAATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCTGGc
gi|26578                      :   AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAA-GTC-GGCCACAAGGCTCTGATTCCCTCAAACTGTTGTC-AGCACAATGTCAGG
gi|26579                      :   AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTC-TGTCAAGCACAATGTC--TCCACAA-GCTCT-ATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGc
gi|26580                      :   AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCTGGGCACAAGGCTCCGc
gi|26581                      :   AATGTCAGGCCA---CAAG-CTCTGATTCCC--AAACTCTTGTCAAGCACAATGTCTGGGCACAAGGCTCCGTTT
gi|26582                      :                               CCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCAGGgaactccccaa
gi|26583                      :                      cacaagacaCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCGGc
gi|26584                      :                   cacaagacaATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCAGGc
gi|26585                      :                            ATTCCCTCAAACTGTTG-CAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAATGTCAGGc
gi|26586                      :                            ATTCCTTCAAACTCTTATCAAGCACAATGTC-GGCCACAAGGCTCTGATTCCCTCAAACTGTTG-CAAGCACAATGTCAGGc
gi|26587                      :                            ATTCCTTCAAACTCTTATCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAA-GTCGGc
gi|26588                      :                            ATTCCCTCAAACTGTTGTCA-GCACAATGTCAGGCCACAAG-CTCTGATTCCC--AAACTCTTGTCAAGCACAATGTCTGGc
gi|26589                      :                            ATTCCTTCAAACTCTTATCAAGCACAATGTCAGGCCACAAGGCTCTGA

lowQualScore                  :               333                                                                                           
lowQualScore                  :      8        333    2 9                                  3                  1                              
lowQualScore                  :      .        ...    . .                                  .                  .                              
lowQualScore                  :      8        222    2 4                                  4                  5                              
consensus                     :   AATGTCAGGCCATCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGG
Reference ( family-873 )      :   AATGTCAGGCCATCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGG
gi|26574                      :   AAT-TTAGGCCATCACAACAC----ACTCCCTAAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATT-CCTCAAACTCTTGTCAAGCACAATGTCAGG
gi|26575                      : aaAAT-TTAGGCCATCACAACAC----ACTCCCTAAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATT-CCTCAAACTCTTGTCAAGCACAATGTCAGGc
gi|26576                      : aaAAT-TTAGGCCATCACAACAC----ACTCCCTAAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATT-CCTCAAACTCTTGTCAAGCACAATGTCAGGc
gi|26577                      : aaAATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCTGGc
gi|26578                      :   AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAA-GTC-GGCCACAAGGCTCTGATTCCCTCAAACTGTTGTC-AGCACAATGTCAGG
gi|26579                      :   AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTCT-GTCAAGCACAATGTC--TCCACAAG-CTCT-ATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGc
gi|26580                      :   AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCTGGGCACAAGGCTCCGc
gi|26581                      :   AATGTCAGGCCA---CAAG-CTCTGATTCCC--AAACTCTTGTCAAGCACAATGTCTGGGCACAAGGCTCCGTTT
gi|26582                      :                               CCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCAGGgaactccccaa
gi|26583                      :                      cacaagacaCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCGGc
gi|26584                      :                   cacaagacaATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCAGGc
gi|26585                      :                            ATTCCCTCAAACTGTTG-CAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAATGTCAGGc
gi|26586                      :                            ATTCCTTCAAACTCTTATCAAGCACAATGTC-GGCCACAAGGCTCTGATTCCCTCAAACTGTTG-CAAGCACAATGTCAGGc
gi|26587                      :                            ATTCCTTCAAACTCTTATCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAA-GTCGGc
gi|26588                      :                            ATTCCCTCAAACTGTTGTCA-GCACAATGTCAGGCCACAAG-CTCTGATTCCC--AAACTCTTGTCAAGCACAATGTCTGGc
gi|26589                      :                            ATTCCTTCAAACTCTTATCAAGCACAATGTCAGGCCACAAGGCTCTGA


blockSeqs                     :      G        TCA    A T                                  A                  C
blockSeqs                     :      G        TCA    A T                                  A                  C
blockSeqs                     :      G        .      G T                                  A                  C
blockSeqs                     :      G        .      G T                                  T                  C
blockSeqs                     :      G        .      G T                                  T                  C
blockSeqs                     :      .        .      G .                                  A                  C
blockSeqs                     :      .        .      . .                                  A                  C
blockSeqs                     :                                                           A                  C
blockSeqs                     :                                                           A                  C
blockSeqs                     :                                                           A                  C
blockSeqs                     :                                                           A                  .
blockSeqs                     :                                                           A                  .
blockSeqs                     :                                                           .                   
blockSeqs                     :                                                           .                   
blockSeqs                     :                                                           .                   


blockSeqCons                  :               ***
originalCons                  :   AATGTCAGGCCATCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGG
finalCons                     :   AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGG

lowQualScore                  :               222                                                                                           
lowQualScore                  :      8        666    2 9                                  3                  1                              
lowQualScore                  :      .        ...    . .                                  .                  .                              
lowQualScore                  :      8        222    2 4                                  4                  5                              
consensus                     :   AATGTCAGGCCATCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGG
Reference ( family-873 )      :   AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCAGG
gi|26574                      :   AAT-TTAGGCCATCACAACAC----ACTCCCTAAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATT-CCTCAAACTCTTGTCAAGCACAATGTCAGG
gi|26575                      : aaAAT-TTAGGCCATCACAACAC----ACTCCCTAAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATT-CCTCAAACTCTTGTCAAGCACAATGTCAGGc
gi|26576                      : aaAAT-TTAGGCCATCACAACAC----ACTCCCTAAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATT-CCTCAAACTCTTGTCAAGCACAATGTCAGGc
gi|26577                      : aaAATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCTGGc
gi|26578                      :   AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAA-GTC-GGCCACAAGGCTCTGATTCCCTCAAACTGTTGTC-AGCACAATGTCAGG
gi|26579                      :   AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTC-TGTCAAGCACAATGTC--TCCACAA-GCTCT-ATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGc
gi|26580                      :   AATGTCAGGCCA---CAAGGCTCTGATTCCCTCAAACTCTTGTCAAGCACAATGTCTGGGCACAAGGCTCCGc
gi|26581                      :   AATGTCAGGCCA---CAAG-CTCTGATTCCC--AAACTCTTGTCAAGCACAATGTCTGGGCACAAGGCTCCGTTT
gi|26582                      :                               CCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCAGGgaactccccaa
gi|26583                      :                      cacaagacaCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCGGc
gi|26584                      :                   cacaagacaATTCCCTCAAACTCTTGTCAAGCACAATGTCAGGCCACAAGGTTCTGATTCCTTCAAACTCTTATCAAGCACAATGTCAGGc
gi|26585                      :                            ATTCCCTCAAACTGTTG-CAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAATGTCAGGc
gi|26586                      :                            ATTCCTTCAAACTCTTATCAAGCACAATGTC-GGCCACAAGGCTCTGATTCCCTCAAACTGTTG-CAAGCACAATGTCAGGc
gi|26587                      :                            ATTCCTTCAAACTCTTATCAAGCACAATGTCAGGCCACAAGGCTCTGATTCCCTCAAACTGTTGTCAAGCACAA-GTCGGc
gi|26588                      :                            ATTCCCTCAAACTGTTGTCA-GCACAATGTCAGGCCACAAG-CTCTGATTCCC--AAACTCTTGTCAAGCACAATGTCTGGc
gi|26589                      :                            ATTCCTTCAAACTCTTATCAAGCACAATGTCAGGCCACAAGGCTCTGA