lowQualScore                  :      2      8      2 2       5    66666 2      2             
lowQualScore                  :      .      .      . .       .    ..... .      .             
lowQualScore                  :      7      0      7 7       3    77777 7      7             
consensus                     : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA
Reference ( gi|77238 )        : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77239                      : AAAAA-TCACTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTA
gi|77241                      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCGG-AAAGACAAAGTAA
gi|77240                      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCGG-AAAGACAAAGTAA
gi|77242                      : AAAAA-TCATTC-AACCTT-T-GCATAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77243                      : AAAAT-TCATTCGAACCTT-T-GCAGAAAATATG-----C-TATCTG-AAACACAAAGTA
gi|77245                      : AAATT-TCATTC-AACCTC-T-GCAAAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77246                      : AAAAA-TCATTC-AACCTT-T-TCAGAAA-TATG-----C-TATCTG-AAACACAAA
gi|77247                      : AAGAT-TCATTC-AACCTTCT-GCAGAAA-TATG-----C-TATCTG--AACACAAA
gi|77249                      : AAAAT-TGATTT-AATCTT-T-GCAGAAA-TATG-----C-TGTCTG-AAACAAAAtagtt
gi|77248                      : AAAAT-TAATTT-AATCTT-T-GCAGTAA-TATGCTAGGC-TATCTG-AAACACAAACTAA
gi|77244                      : AAAATGTCATTCGAACCTT-TTGCAGAAAATATG-----C-TATCTGAAAACACAAAtt
gi|77250                      :  AATT-TCATTC-AACCTT-T-GCA-AAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77251                      :     T-TGATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTtt
gi|77252                      :     T-TCATTC-AACCTT-T-GCAGAAA-TTTG-----CTTATCTG-AAACA-AAAGTA
gi|77253                      :      -TTATTCCAACCTT-T-GCAGAAA-TATG-----C-AATCTG-AAAGGCAAAGTAAgtt

lowQualScore                  :      2      7      2 2       5    66666 2      2             
lowQualScore                  :      .      .      . .       .    ..... .      .             
lowQualScore                  :      5      5      5 5       0    22222 5      5             
consensus                     : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA
Reference ( family-870 )      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77238                      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77239                      : AAAAA-TCACTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTA
gi|77240                      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCGG-AAAGACAAAGTAA
gi|77241                      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCGG-AAAGACAAAGTAA
gi|77242                      : AAAAA-TCATTC-AACCTT-T-GCATAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77243                      : AAAAT-TCATTCGAACCTT-T-GCAGAAAATATG-----C-TATCTG-AAACACAAAGTA
gi|77244                      : AAAATGTCATTCGAACCTT-TTGCAGAAAATATG-----C-TATCTGAAAACACAAA
gi|77245                      : AAATT-TCATTC-AACCTC-T-GCAAAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77246                      : AAAAA-TCATTC-AACCTT-T-TCAGAAA-TATG-----C-TATCTG-AAACACAAA
gi|77247                      : AAGAT-TCATTC-AACCTTCT-GCAGAAA-TATG-----C-TATCTG--AACACAAA
gi|77248                      : AAAAT-TAATTT-AATCTT-T-GCAGTAA-TATGCTAGGC-TATCTG-AAACACAAACTAAtagtt
gi|77249                      : AAAAT-TGATTT-AATCTT-T-GCAGAAA-TATG-----C-TGTCTG-AAACAAAAtt
gi|77250                      :  AATT-TCATTC-AACCTT-T-GCA-AAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77251                      :     T-TGATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTtt
gi|77252                      :     T-TCATTC-AACCTT-T-GCAGAAA-TTTG-----CTTATCTG-AAACA-AAAGTA
gi|77253                      :      -TTATTCCAACCTT-T-GCAGAAA-TATG-----C-AATCTG-AAAGGCAAAGTAAgtt

lowQualScore                  :      2      7      2 2       5    66666 2      2             
lowQualScore                  :      .      .      . .       .    ..... .      .             
lowQualScore                  :      5      5      5 5       0    22222 5      5             
consensus                     : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA
Reference ( family-870 )      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77238                      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77239                      : AAAAA-TCACTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTA
gi|77240                      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCGG-AAAGACAAAGTAA
gi|77241                      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCGG-AAAGACAAAGTAA
gi|77242                      : AAAAA-TCATTC-AACCTT-T-GCATAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77243                      : AAAAT-TCATTCGAACCTT-T-GCAGAAAATATG-----C-TATCTG-AAACACAAAGTA
gi|77244                      : AAAATGTCATTCGAACCTT-TTGCAGAAAATATG-----C-TATCTGAAAACACAAA
gi|77245                      : AAATT-TCATTC-AACCTC-T-GCAAAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77246                      : AAAAA-TCATTC-AACCTT-T-TCAGAAA-TATG-----C-TATCTG-AAACACAAA
gi|77247                      : AAGAT-TCATTC-AACCTTCT-GCAGAAA-TATG-----C-TATCTG--AACACAAA
gi|77248                      : AAAAT-TAATTT-AATCTT-T-GCAGTAA-TATGCTAGGC-TATCTG-AAACACAAACTAAtagtt
gi|77249                      : AAAAT-TGATTT-AATCTT-T-GCAGAAA-TATG-----C-TGTCTG-AAACAAAAtt
gi|77250                      :  AATT-TCATTC-AACCTT-T-GCA-AAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77251                      :     T-TGATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTtt
gi|77252                      :     T-TCATTC-AACCTT-T-GCAGAAA-TTTG-----CTTATCTG-AAACA-AAAGTA
gi|77253                      :      -TTATTCCAACCTT-T-GCAGAAA-TATG-----C-AATCTG-AAAGGCAAAGTAAgtt


blockSeqs                     :      G      G      C T       A    CTAGG T      A
blockSeqs                     :      .      G      . .       A    .     .      .
blockSeqs                     :      .      C      . .       .    .     .      .
blockSeqs                     :      .      .      . .       .    .     .      .
blockSeqs                     :      .      .      . .       .    .     .      .
blockSeqs                     :      .      .      . .       .    .     .      .
blockSeqs                     :      .      .      . .       .    .     .      .
blockSeqs                     :      .      .      . .       .    .     .      .
blockSeqs                     :      .      .      . .       .    .     .      .
blockSeqs                     :      .      .      . .       .    .     .      .
blockSeqs                     :      .      .      . .       .    .     .      .
blockSeqs                     :      .      .      . .       .    .     .      .
blockSeqs                     :      .      .      . .       .    .     .      .
blockSeqs                     :      .      .      . .       .    .     .      .
blockSeqs                     :      .      .      . .       .    .     .      .


blockSeqCons                  : 
originalCons                  : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA
finalCons                     : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA

lowQualScore                  :      2      7      2 2       5    66666 2      2             
lowQualScore                  :      .      .      . .       .    ..... .      .             
lowQualScore                  :      5      5      5 5       0    22222 5      5             
consensus                     : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA
Reference ( family-870 )      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77238                      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77239                      : AAAAA-TCACTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTA
gi|77240                      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCGG-AAAGACAAAGTAA
gi|77241                      : AAAAT-TCATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCGG-AAAGACAAAGTAA
gi|77242                      : AAAAA-TCATTC-AACCTT-T-GCATAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77243                      : AAAAT-TCATTCGAACCTT-T-GCAGAAAATATG-----C-TATCTG-AAACACAAAGTA
gi|77244                      : AAAATGTCATTCGAACCTT-TTGCAGAAAATATG-----C-TATCTGAAAACACAAA
gi|77245                      : AAATT-TCATTC-AACCTC-T-GCAAAAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77246                      : AAAAA-TCATTC-AACCTT-T-TCAGAAA-TATG-----C-TATCTG-AAACACAAA
gi|77247                      : AAGAT-TCATTC-AACCTTCT-GCAGAAA-TATG-----C-TATCTG--AACACAAA
gi|77248                      : AAAAT-TAATTT-AATCTT-T-GCAGTAA-TATGCTAGGC-TATCTG-AAACACAAACTAAtagtt
gi|77249                      : AAAAT-TGATTT-AATCTT-T-GCAGAAA-TATG-----C-TGTCTG-AAACAAAAtt
gi|77250                      :  AATT-TCATTC-AACCTT-T-GCA-AAA-TATG-----C-TATCTG-AAACACAAAGTAA
gi|77251                      :     T-TGATTC-AACCTT-T-GCAGAAA-TATG-----C-TATCTG-AAACACAAAGTtt
gi|77252                      :     T-TCATTC-AACCTT-T-GCAGAAA-TTTG-----CTTATCTG-AAACA-AAAGTA
gi|77253                      :      -TTATTCCAACCTT-T-GCAGAAA-TATG-----C-AATCTG-AAAGGCAAAGTAAgtt