lowQualScore : 22222222 11
lowQualScore : 4 9999 4 6 777 2 2 33333333 2 555 2 2 8 33 555 0 66 2 3 555 3 3 44 3 3 9999 00 3 3 3
lowQualScore : . .... . . ... . . ........ . ... . . . .. ... . .. . . ... . . .. . . .... .. . . .
lowQualScore : 4 4444 0 7 999 9 9 44444444 9 111 9 9 6 99 000 9 88 4 1 888 3 3 66 3 3 6666 44 1 1 6
consensus : TGCAA-TA----C-AGA-CTATC---TC-CCTGCAAAAA-G-----G-TGC--GACAG-TCTGA-TG-AA--C---TAACACA--CACC-TATTCG---G-AAC-A--CTT-AG-CAAT----TTC--TTTC-A-AGTTAAGGAAAAGTTC-CGA
Reference ( gi|113365 ) : TGCAA-TA----C-AGA-CTATC---TC-CCTGCAAAAAAG-----G-TGT--GACAG-TCTGA-TG-AA--C---TGACACA--CACC-TATTCG---G-AAC-A--CTT-AG-CAAT----TTC--TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113366 : TGCAA-TA----G-AGA-CTATC---TC-CCTGCAAAA-AG-----G-TGT--GACAG-TCTGA-TG-AA--C---TAACACA--CACC-TATTCG---G-AAC-A--CTT-TG-CAAT----TTC--TTTC-A-AGTTGATGAAAGGTTC-CGA
gi|113367 : TGCAA-TA----C-AGA-CTATC---TC-CCTGCAAAAA-G-----G-CGT--GACAC-TCCGA-TG-AA--C---TAACAC----ACC-TATTCG---G-AAC-A--CTG-AC-AAAT----TTC--TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113368 : TGCAA-TA----C-AGA-CTATC---TT-CCCGCAAAA--G-----G-TGT--GACAG-TCTGA-TGGAA--C---TAACACC--C-TC-TATTCG---G-AA--A--CTC-AG-CAAT----TTC--TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113369 : TGCAAATA----C-AGA-CTATC---CT-CCTGC--AAAAG-----G-TGT--GACAGATCTGA-TGAAA--C---TAACACA--CCCC-TATTCG---G-AAC-A--CTT-AG-CAAT----TTC--TTTCAA-AGTTAAGGAAAAGTTCTCGA
gi|113370 : TGCAA-CA----C-ATA-CTATT---TC-CCTGCAAAAT-G-----G-TGT--GAAAG-TGTGA-TG-AA--C---TGATACA--CAGC-TATTCG---G-AAG-A--CTT-AG-CAAT----TTA--TTTC-A-AGTTTAGGAAAAGTTA-CGA
gi|113371 : TGCAA-TATGCGC-AGA-CTATCGTGCC-GCTGCATAAC-G-----G-TGTCGGACAG-TCTGAGTG-AAAGC---TAACACA--CCCC-TATTCG---GGAACGA--CTT-AGACAAT----TTC--TTAC-A--GTTAAGGAAAAGTTC-CGA
gi|113372 : TGCAA-TT----C-AGA-CTATT---TT-CCTGCGAGAA-G-----G-TGT--GACAA-TTTGA-TG-AA--C---TGATACA--CA
gi|113373 : GCAA-TA----CTAGAACTATC---TC-C-TGCAGAAAAG-----G-TGT--GACAG-TC-GA-TGAAA--C---TAACACATCCCCT-TATTCGGTTG-GAC-AATCTT-AG-CATTTTTCTTT--TTTC-A-AGTTAAGGTAAAGTTC-CG
gi|113374 : AA-TT----C-AGAACTATC---TCTCCTGCCCAAAAT-----GCTGG--AACAG-TTTGA-TG-AA--C---TGATACA--CATC-
gi|113375 : -AGA-CTGAT---TC-CTTGCTAAAA-G-----G-TGC--AACAG-TTTGT-TG-AA--C---TGATACA--CACG-TATTTG---G-AGC-A--CTT-AC-CAAT----TTC--TTTC-A-AGTTAAGAAAAAGTAT-CGA
gi|113376 : GA-CTGTTA--TC-CATGCTAAAA-G-----G-TAG--GCCAG-GTTGA-TG-AA--C---TAATGCAT-CGCTATATTGG---G-AAT-A--CCT-AG-CAAC----TTC--CTTT-A-A
gi|113377 : A-CTATC---TC-CCTGCAAAAAGT-----G-TG---GACAG-TCTGA-TG-AA--C---TAACACA--CCCC-TATTCG---G-AAC-C--CTTAAG-CAATG---TTCTTTTTC-A-A-TTAAGGGAAA
gi|113378 : ---TC-CCTGCAGAAAGGTACATG-TAC--GTCAG-TTTGA-TG-AA--C---TGATACA--CACC-AATTCA---G--AC-A--TCT-AG-CAAC----TTCA-TTTT-A-TTTTTATGAAAAGTTC-TGA
gi|113379 : ---TC-CTTGCTGAAC-G-----A-TGC--ATCAG-TTTGA-TG-AA--CAAATTAC-CA--TATC-TTTTTG---G-AAC-A--CCT-AG-CAGC----TTCA-TTTC-ATATCTTATGAAAAGTTC-TGA
gi|113380 : AAT----TTC--TTTC-A-AGTTAAGGAAAAGTTC-CGA
Alignments
lowQualScore : 1111111 1111
lowQualScore : 4 8888 3 6 777 2 33 2 66 2 7777777 2 2 2 99 2 2 2 1 66 888 3 44 3 3 2 5555 2 2 3
lowQualScore : . .... . . ... . .. . .. . ....... . . . .. . . . . .. ... . .. . . . .... . . .
lowQualScore : 0 5555 6 2 333 7 77 7 99 7 6666666 7 7 7 00 7 7 7 7 88 555 1 22 1 1 9 7777 9 9 3
consensus : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAA-G-GTGC------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CACC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
Reference ( family-867 ) : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAA-G-GTGC------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CACC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113365 : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAAAG-GTGT------GACAG-TCTGA-TG-AA--CTGAC-AC-A-CACC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113366 : TGCAA-TA----G-AGA-CTATC---TC-CCTGC--A-AAAA-G-GTGT------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CACC--TATTCGG---AAC-A--CTT-TG-CAAT-TTC----TTTC-A-AGTTGATGAAAGGTTC-CGA
gi|113367 : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAA-G-GCGT------GACAC-TCCGA-TG-AA--CTA---AC-A-CACC--TATTCGG---AAC-A--CTG-AC-AAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113368 : TGCAA-TA----C-AGA-CTATC---TT-CCCGC--A-AAA--G-GTGT------GACAG-TCTGA-TGGAA--CTAAC-AC-C-C-TC--TATTCGG---AA--A--CTC-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113369 : TGCAAATA----C-AGA-CTATC---CT-CCTGC--A-AAA--G-GTGT------GACAGATCTGA-TG-AAA-CTAAC-AC-A-CCCC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTCAA-AGTTAAGGAAAAGTTCTCGA
gi|113370 : TGCAA-CA----C-ATA-CTATT---TC-CCTGC--A-AAAT-G-GTGT------GAAAG-TGTGA-TG-AA--CTGAT-AC-A-CAGC--TATTCGG---AAG-A--CTT-AG-CAAT-TTA----TTTC-A-AGTTTAGGAAAAGTTA-CGA
gi|113371 : TGCAA-TATGCGC-AGA-CTATCGTGCC-GCTGC--A-TAAC-G-GTGTCG----GACAG-TCTGAGTG-AAAGCTAAC-AC-A-CCCC--TATTCGGG--AACGA--CTT-AGACAAT-TTC----TTAC-A--GTTAAGGAAAAGTTC-CGA
gi|113372 : TGCAA-TT----C-AGA-CTATT---TT-CCTGC--G-AGAA-G-GTGT------GACAA-TTTGA-TG-AA--CTGAT-AC-A-CA
gi|113373 : GCAA-TA----CTAGAACTATC---TC-C-TGC--AGAAAA-G-GTGT------GACAG-TC-GA-TG-AAA-CTAAC-AC-A-TCCCCTTATTCGGTTGGAC-AATCTT-AG-CATT-TTTCTTTTTTC-A-AGTTAAGGTAAAGTTC-CG
gi|113374 : AA-TT----C-AGAACTATC---TCTCCTGCCCA-AAAT-G-CTGG------AACAG-TTTGA-TG-AA--CTGAT-AC-A-CATC--
gi|113375 : -AGA-CTGAT---TC-CTTGC--T-AAAA-G-GTGC------AACAG-TTTGT-TG-AA--CTGAT-AC-A-CACG--TATTTGG---AGC-A--CTT-AC-CAAT-TTC----TTTC-A-AGTTAAGAAAAAGTAT-CGA
gi|113376 : GA-CTGTTA--TC-CATGC--T-AAAA-G-GTAG------GCCAG-GTTGA-TG-AA--CTAAT-GC-ATCGCTA-TATTGGG---AAT-A--CCT-AG-CAAC-TTC----CTTT-A-A
gi|113377 : A-CTATC---TC-CCTGC--A-AAAA-GTGTG-------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CCCC--TATTCGG---AAC-C--CTTAAG-CAATGTTCTT--TTTC-A-A-TTAAGGGAAA
gi|113378 : ---TC-CCTGC--A-GAAA-G-GTACATGTACGTCAG-TTTGA-TG-AA--CTGAT-AC-A-CACC--AATTCAG----AC-A--TCT-AG-CAAC-TTCA---TTTT-A-TTTTTATGAAAAGTTC-TGA
gi|113379 : ---TC-CTTGC--T-GAAC-G-ATGC------ATCAG-TTTGA-TG-AA--CAAATTACCA-TATC--TTTTTGG---AAC-A--CCT-AG-CAGC-TTCA---TTTC-ATATCTTATGAAAAGTTC-TGA
gi|113380 : AAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
Alignments
lowQualScore : 1111111 1111
lowQualScore : 4 8888 3 6 777 2 33 2 66 2 7777777 2 2 2 99 2 2 2 1 66 888 3 44 3 3 2 5555 2 2 3
lowQualScore : . .... . . ... . .. . .. . ....... . . . .. . . . . .. ... . .. . . . .... . . .
lowQualScore : 0 5555 6 2 333 7 77 7 99 7 6666666 7 7 7 00 7 7 7 7 88 555 1 22 1 1 9 7777 9 9 3
consensus : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAA-G-GTGC------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CACC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
Reference ( family-867 ) : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAA-G-GTGC------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CACC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113365 : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAAAG-GTGT------GACAG-TCTGA-TG-AA--CTGAC-AC-A-CACC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113366 : TGCAA-TA----G-AGA-CTATC---TC-CCTGC--A-AAAA-G-GTGT------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CACC--TATTCGG---AAC-A--CTT-TG-CAAT-TTC----TTTC-A-AGTTGATGAAAGGTTC-CGA
gi|113367 : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAA-G-GCGT------GACAC-TCCGA-TG-AA--CTA---AC-A-CACC--TATTCGG---AAC-A--CTG-AC-AAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113368 : TGCAA-TA----C-AGA-CTATC---TT-CCCGC--A-AAA--G-GTGT------GACAG-TCTGA-TGGAA--CTAAC-AC-C-C-TC--TATTCGG---AA--A--CTC-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113369 : TGCAAATA----C-AGA-CTATC---CT-CCTGC--A-AAA--G-GTGT------GACAGATCTGA-TG-AAA-CTAAC-AC-A-CCCC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTCAA-AGTTAAGGAAAAGTTCTCGA
gi|113370 : TGCAA-CA----C-ATA-CTATT---TC-CCTGC--A-AAAT-G-GTGT------GAAAG-TGTGA-TG-AA--CTGAT-AC-A-CAGC--TATTCGG---AAG-A--CTT-AG-CAAT-TTA----TTTC-A-AGTTTAGGAAAAGTTA-CGA
gi|113371 : TGCAA-TATGCGC-AGA-CTATCGTGCC-GCTGC--A-TAAC-G-GTGTCG----GACAG-TCTGAGTG-AAAGCTAAC-AC-A-CCCC--TATTCGGG--AACGA--CTT-AGACAAT-TTC----TTAC-A--GTTAAGGAAAAGTTC-CGA
gi|113372 : TGCAA-TT----C-AGA-CTATT---TT-CCTGC--G-AGAA-G-GTGT------GACAA-TTTGA-TG-AA--CTGAT-AC-A-CA
gi|113373 : GCAA-TA----CTAGAACTATC---TC-C-TGC--AGAAAA-G-GTGT------GACAG-TC-GA-TG-AAA-CTAAC-AC-A-TCCCCTTATTCGGTTGGAC-AATCTT-AG-CATT-TTTCTTTTTTC-A-AGTTAAGGTAAAGTTC-CG
gi|113374 : AA-TT----C-AGAACTATC---TCTCCTGCCCA-AAAT-G-CTGG------AACAG-TTTGA-TG-AA--CTGAT-AC-A-CATC--
gi|113375 : -AGA-CTGAT---TC-CTTGC--T-AAAA-G-GTGC------AACAG-TTTGT-TG-AA--CTGAT-AC-A-CACG--TATTTGG---AGC-A--CTT-AC-CAAT-TTC----TTTC-A-AGTTAAGAAAAAGTAT-CGA
gi|113376 : GA-CTGTTA--TC-CATGC--T-AAAA-G-GTAG------GCCAG-GTTGA-TG-AA--CTAAT-GC-ATCGCTA-TATTGGG---AAT-A--CCT-AG-CAAC-TTC----CTTT-A-A
gi|113377 : A-CTATC---TC-CCTGC--A-AAAA-GTGTG-------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CCCC--TATTCGG---AAC-C--CTTAAG-CAATGTTCTT--TTTC-A-A-TTAAGGGAAA
gi|113378 : ---TC-CCTGC--A-GAAA-G-GTACATGTACGTCAG-TTTGA-TG-AA--CTGAT-AC-A-CACC--AATTCAG----AC-A--TCT-AG-CAAC-TTCA---TTTT-A-TTTTTATGAAAAGTTC-TGA
gi|113379 : ---TC-CTTGC--T-GAAC-G-ATGC------ATCAG-TTTGA-TG-AA--CAAATTACCA-TATC--TTTTTGG---AAC-A--CCT-AG-CAGC-TTCA---TTTC-ATATCTTATGAAAAGTTC-TGA
gi|113380 : AAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
blockSeqs : A TGCG T A GTG T CC G A T CATGTAC A G G AG T C T A CT TTG G AT A A G CTTT A T T
blockSeqs : . . . A A . . . A . TCG . . . A . . . A A G . . . . . TT . . .
blockSeqs : . . . . . . . . T . T . . . A . . . C . . . . . . . A . . .
blockSeqs : . . . . . . . . C . T . . . . . . . A . . . . . . . A . . .
blockSeqs : . . . . . . . . A . T . . . . . . . C . . . . . . . . . . .
blockSeqs : . . . . . . . . A . T . . . . . . . A . . . . . . . . . . .
blockSeqs : . . . . . . . . T . T . . . . . . . C . . . . . . . . . . .
blockSeqs : . . . . . . . . A . T . . . . . . . A . . . . . . . . . . .
blockSeqs : . . . . . . . . A . T . . . . . . . A . . . . . . . . . . .
blockSeqs : . . . . . . A . G . . . . . . . G . . . . . . . . . . .
blockSeqs : . . . . . A . C . . . . . . . C . . . . . . . . . . .
blockSeqs : . . . . . C . G . . . . . . . A . . . . . . . . . .
blockSeqs : . . . . . . C . . . . . . . A . . . . .
blockSeqs : . . . . . . . . . . . . . . .
blockSeqCons : A*
originalCons : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAA-G-GTGC------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CACC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
finalCons : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAA-G-GTGC------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CACC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
Alignments
lowQualScore : 1111111 1111
lowQualScore : 4 8888 3 6 777 2 33 2 66 2 7777777 2 2 2 99 2 2 2 1 66 888 3 44 3 3 2 5555 2 2 3
lowQualScore : . .... . . ... . .. . .. . ....... . . . .. . . . . .. ... . .. . . . .... . . .
lowQualScore : 0 5555 6 2 333 7 77 7 99 7 6666666 7 7 7 00 7 7 7 7 88 555 1 22 1 1 9 7777 9 9 3
consensus : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAA-G-GTGC------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CACC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
Reference ( family-867 ) : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAA-G-GTGC------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CACC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113365 : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAAAG-GTGT------GACAG-TCTGA-TG-AA--CTGAC-AC-A-CACC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113366 : TGCAA-TA----G-AGA-CTATC---TC-CCTGC--A-AAAA-G-GTGT------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CACC--TATTCGG---AAC-A--CTT-TG-CAAT-TTC----TTTC-A-AGTTGATGAAAGGTTC-CGA
gi|113367 : TGCAA-TA----C-AGA-CTATC---TC-CCTGC--A-AAAA-G-GCGT------GACAC-TCCGA-TG-AA--CTA---AC-A-CACC--TATTCGG---AAC-A--CTG-AC-AAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113368 : TGCAA-TA----C-AGA-CTATC---TT-CCCGC--A-AAA--G-GTGT------GACAG-TCTGA-TGGAA--CTAAC-AC-C-C-TC--TATTCGG---AA--A--CTC-AG-CAAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA
gi|113369 : TGCAAATA----C-AGA-CTATC---CT-CCTGC--A-AAA--G-GTGT------GACAGATCTGA-TG-AAA-CTAAC-AC-A-CCCC--TATTCGG---AAC-A--CTT-AG-CAAT-TTC----TTTCAA-AGTTAAGGAAAAGTTCTCGA
gi|113370 : TGCAA-CA----C-ATA-CTATT---TC-CCTGC--A-AAAT-G-GTGT------GAAAG-TGTGA-TG-AA--CTGAT-AC-A-CAGC--TATTCGG---AAG-A--CTT-AG-CAAT-TTA----TTTC-A-AGTTTAGGAAAAGTTA-CGA
gi|113371 : TGCAA-TATGCGC-AGA-CTATCGTGCC-GCTGC--A-TAAC-G-GTGTCG----GACAG-TCTGAGTG-AAAGCTAAC-AC-A-CCCC--TATTCGGG--AACGA--CTT-AGACAAT-TTC----TTAC-A--GTTAAGGAAAAGTTC-CGA
gi|113372 : TGCAA-TT----C-AGA-CTATT---TT-CCTGC--G-AGAA-G-GTGT------GACAA-TTTGA-TG-AA--CTGAT-AC-A-CA
gi|113373 : GCAA-TA----CTAGAACTATC---TC-C-TGC--AGAAAA-G-GTGT------GACAG-TC-GA-TG-AAA-CTAAC-AC-A-TCCCCTTATTCGGTTGGAC-AATCTT-AG-CATT-TTTCTTTTTTC-A-AGTTAAGGTAAAGTTC-CG
gi|113374 : AA-TT----C-AGAACTATC---TCTCCTGCCCA-AAAT-G-CTGG------AACAG-TTTGA-TG-AA--CTGAT-AC-A-CATC--
gi|113375 : -AGA-CTGAT---TC-CTTGC--T-AAAA-G-GTGC------AACAG-TTTGT-TG-AA--CTGAT-AC-A-CACG--TATTTGG---AGC-A--CTT-AC-CAAT-TTC----TTTC-A-AGTTAAGAAAAAGTAT-CGA
gi|113376 : GA-CTGTTA--TC-CATGC--T-AAAA-G-GTAG------GCCAG-GTTGA-TG-AA--CTAAT-GC-ATCGCTA-TATTGGG---AAT-A--CCT-AG-CAAC-TTC----CTTT-A-A
gi|113377 : A-CTATC---TC-CCTGC--A-AAAA-GTGTG-------GACAG-TCTGA-TG-AA--CTAAC-AC-A-CCCC--TATTCGG---AAC-C--CTTAAG-CAATGTTCTT--TTTC-A-A-TTAAGGGAAA
gi|113378 : ---TC-CCTGC--A-GAAA-G-GTACATGTACGTCAG-TTTGA-TG-AA--CTGAT-AC-A-CACC--AATTCAG----AC-A--TCT-AG-CAAC-TTCA---TTTT-A-TTTTTATGAAAAGTTC-TGA
gi|113379 : ---TC-CTTGC--T-GAAC-G-ATGC------ATCAG-TTTGA-TG-AA--CAAATTACCA-TATC--TTTTTGG---AAC-A--CCT-AG-CAGC-TTCA---TTTC-ATATCTTATGAAAAGTTC-TGA
gi|113380 : AAT-TTC----TTTC-A-AGTTAAGGAAAAGTTC-CGA