lowQualScore : 11111111111 111 11111111 1111111 1111 111111 11 111
lowQualScore : 4444 5555 444 3333 4 4 5 88888888888 3 444 444 555 0 33 11111111 4 4444444 66 8 1111 2 33 999 66 333333 33 66666 4 2 444 0 66666 5 2 2 0 33 0 2 2 2 4 2 4 2 2 33 000 555555 5555
lowQualScore : .... .... ... .... . . . ........... . ... ... ... . .. ........ . ....... .. . .... . .. ... .. ...... .. ..... . . ... . ..... . . . . .. . . . . . . . . . .. ... ...... ....
lowQualScore : 9999 5555 777 2222 9 0 8 77777777777 8 777 000 000 8 99 44444444 5 4444444 33 0 8888 7 77 444 44 000000 77 44444 4 8 777 1 77777 0 7 7 5 99 5 0 7 7 4 7 3 7 7 77 111 000000 7777
consensus : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATTTCGGGTA------GN---TAGGAGTAGACTTT---C---T---CTGTA--AAT---AGNGCACGACNTTGTG---TC-TTT--TAGACGAATC---NG-A--GACGTGTTTCNCT-G-C-GCAGT--TANC---GCAGAGATTTACGTTAC---AAAGT-----TCGCAATGAC-TCT-GTAGGGGGACAGTTTCACAGA-GGT-CACACAGNA-GGACNT-CCTGGGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
Reference ( gi|20029 ) : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATCTCGGGTA------GA---TAGGAGTAGACTTT---C---T---CTGTA--AAT---AGTGCACGACATTGTG---TT-GTT--TAGACAAATC---CG-A--GGTGTGTTTCACT-G-C-GCAGT--TAAC---ACAGAGATTTATATTAC---AAAGT-----TTGCAATGAC-TCT-GTAGGGAGACAGTTTCACAGA-GGT-CACACAGGA-GGACTT-CCTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20030 : TCTCGCAGTGAAGTTCGCAGC---GTTT---T-CGGC---GTGGT-TTCGGACATCTCGGGTAA-----GA---TAGGAGTAGACTTT---C---T---CTGTA--AAT---AGTGCACGACATTGTG---TT-GTT--TAGACAAATC---CG-A--GGTGTGTTTCACT-G-C-GCAGT--TAAC---ACAGAGATTTATATTAC---AAAGT-----TTGCAATGAC-TCT-GTAGGG-GACAGTTTCACAGA-GGT-CACACAGGA-GGACTT-CCTGAGCAATG-CGC--GGGGA--AT---G--CA----TTTCT
gi|20031 : TCTCGCAGTTAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATCTCGGGTA------GT---TAGGAGTAGACTTT---C---T---CTGTA--AAT---GGTGCACGACATTATG---TC-GTT--TAGACGAATC---AG-A--GATGTGTTTCACT-G-C-GCAGT--TACC---ACAGAGATTTATGTTAC---AAAGT-----TCACAATGAC-TCT-CTAGGGGGACAGTTTCACAGA-GGT-CACACAGGA-GGACTT-CCTGAGTAAAG-CTT--CGGGG--AT---G--CA----TTTCT
gi|20032 : TCTCGCAGTGAAGTTCGCAGT---GTTT---ATCGGC---GTG-A-TTTGGACATCTTGGGTA------GC---TAGGAGTAGACTTT---C---T---CTGTA--AAA---ATGGCACGACATTGTG---TC-TTT--TGGACGAATC---TG-A--GAGATGTTTTACT-A-C-ACAAT--TACC---ACAGAGACTTATATTAC---AAAGT-----TCACAATGAG-TCT-GTAGGGGGACGGTTTCACAGA-GGT-CACATAGGA-GGACTT-CTTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20033 : TCTCGCAGTGAAGTTCGCAGT---GTTT---TTCGGA---ATA-T-TTAGGACATTTAGGATA------AT---TGGGAGTAGACTCT---C---T---CTGTA--AAT---AGTACACGACTTTGTG---CC-TTT--TAGACGAATC---CG-A--GATGTGTTTCATT-G-T-ACAGT--TGCC---ACAGAGATTTATGATAC---AACGT-----TCACAATGAC-TCT-GTAGGG-GACATTTTCACATA-AGT-TACAAAGTA-GGACTT-CCTGATCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20034 : TCTCACAGTAATGTTTACAGT---GTTC---ATCGGT---GTG-T-TTTGGACATTTCGGGTA------GG---TGGGTGTAGGCTTT---C---T---CTGTA--AAT---AGGGCACGACATTGTG---CC-TTT--TTGACGAATC---AG-A--GAGATGTTTTACC-A-CAACAGT--TACC---ACA-AGACTAATATTAC---AGAGT-----TCACAA-GAG-TCT-GTAGG--GACAG-TTCACAGA-GGTCCACACAGTAGGGACTTGCCTGAGCACTGCCGC--CGGGA--AT---G--GA----TTTCT
gi|20035 : TTTCTCAGTGAAATTCACACA---GTTT---TTCAGT---ATG-T-GTCCGACATTTTGAGTA------G----------TA--CTTT---C---T---CTGTA--CAA---ATCGCACGACATTGTG---AT-CCT--TAGAGGAATC---GG-A--AAGATGTTTCCCT-G-A-ACAGT--TAGT---ACATAGATTTACGTTAC---AACGT-----TCACATTGAC-ACT-CTAAGGGGAAAGTTTCGCAAA-GTT-CACAAAGGA-GGACTT-CCTGAGCACTG-CGC--CGGGG--GTGCAG--CA----TTTCT
gi|20036 : TCTCACAGTAATGTTTGCAGT---ATTT---GTCGGC---GTG-G-TCTGGGCAGTATGAGTA------GT---TAAGAA---ACTTT---C---T---GTATT--TAT---AGGGCACGACTTTGTG---TT-TTA--TTGACGAATT---CG-A--GAGATGCTCCCCA-A-C-ACAG-----ACCTTGCATAGACTTATATCAC---AACGT-----TCACAGTGAC-TCT-GTAGGTGGGTAGTTTTACAGA-GGT-CACACAAAA-GGATAA-TCTGGGCTCTG-CGCAACGGG----T---C--CA----TTTCT
gi|20037 : TCTCACAATAAAGTCCCCAAC---CTTT---GTCGGT---GTG-T-TTAGGACATTTGGAATATTTTGAGAATTTAGGAGTAA--TTT---T---T---ATGCA--AGTTAAAACGCACAACATTGTT---TT-TAT--TACAGGAATC---AGAA--AGT-TGCTT-GCTAA-C-ACAGT--TCGT---AAATAGACTAATGTCGC---ACTGT-----TCACA--GAC-------------ACAGT---------GGT-CCCACAGTA-CAACGT-CCTGAGCAC-G-C-------GG--AC---T--CA----TCTCT
gi|20038 : CTCACAATAGCGTTTACAGC---GGTC---TTCTGC---GTG-A-TTAGGACATTTTACGTA------GT---TCGGAGTAGACTTTACACATAT---ATGTA--TAT---AGGACACGATATCGTG---CT-TTT--AAGACGAATC---CG-A--GAGATGTTCCCCA-A-C-ACAAG--TCTT---GCAAAGATTTACTTTAC---AAAGT-----TCACAATGAC-TCT-GCATGGGCACATTTTCACATA-GGT-CACAAAGCA-GGACAT-ACTGGGCACTT-CGC--CGGGG--GT---G--CAGCATTTTCT
gi|20041 : CTTGCAATGTAATTTACA-T---ATTTCTTTTAGAT---GTG-TACT---ACACTTTGGATA------AA---TCAAGGTAGATTTT---CGTTT---TTG-G--AAT---GG-G-ACCACTTTGTGT--TT-GTCA-TAGTC--ATC---AG-C--GACGTGTTTCCCT-A-G-GCAGG--CAAT---GCACAGACTGACATGGC---AACGA-----TCGCAGT-ACATCT-GTACTATAGCTGTCCCACAAA-GGG-CATATGGGG-TGACAT-CTTGTGCACTG-TGG--CGGGG--GT---C--CA----
gi|20039 : CTTGCAATGTATTTCACAACTTTGTTT---TTCAAATAAGTG-T----ACACATTTTGGATA------AA---T-TAAGTAGATTTT---CGTTT---TTGGG--AAT---G----ACCACTTTGTG---TTTGTTCATAG-CTCATC---AG-C--GACATGTTTC-CT-AAT-TCAGG--CAAT---GCACAGTTTGACATGAC---AGAAA-----TCGCAGTTAC-ACTAGTACTATAGCCGTCTCACAAAAGGT-CACATCGGT-GGACAT-CTTGGGCACTG-TGG--CGGGG---T---GTCCA----TT
gi|20040 : CTCGCAATAAAGTTGACAGT---GTTC---TTCGAC---GTG-T-GTCGGACATTTTGAATA------GT---TTGGAATATATTTC---C---
gi|20042 : CAGTAAAGTTCGCAGT---GTTT---GTCGGC---ATG-T-TTCGGACATATGGGATT------GT---TAGAA--------C---C---T---CTGTATTACC---GGT--ACGAC---------TT--TT--TAGAGGAATC---AG-A--GACGTGTTT-ACT-GAC-ACGAT--TAGC---GCAGAAATTTATTTTAC---TAAGT-----TCGCCATGGC-TTT-GTGGGAAGATCATGTAACAAC-AGT-CACACAGTA-AGAAGT-CCTGGACACTG-AGC--CGGGG---T---G--CA----
gi|20043 : CAGTAAAGTTCGCAGT---ATTT---GTCGAC---ATG-T-TTCGGACATATGAGAT------------TATTAGCAGACTAT---C---A---GTATT--ACC---GGT--ACGACCTTGTG---TC-TTT--TAGAGGAATC---GG-A--GACGTGCTT-ACT-GAC-ACGAT--TAGC---GCAGAAATTAATTTTAC---TAAGT-----TCGCCATGGC-TTT-GTGGGAAGATCACGTAACAAC-AGT-CACACAGTA-AGAAGT-CCTGGACACTG-CGC--CGGGG---T---G--CA----
gi|20044 : TTCACATC---GTTC---TTTGTC---ATG-A-GTGGTACATTCAGGGTA------GA---GGGGGTTAGATTTC---C---TGTCCTG----GAT----GCGAACAAATTTGTG---AG-GCT--TTGAGGGGTCAGCTG-A--GAAATGTTCCCCC-A-T-GCAGTCCTTAC---ACAG---TTTG----AC---GAGGCACGTATCGCAGTGCA-TCT-GTACCATGGCGGTCTCACACA-GGT-CACATCGCA-TCACGT-CCTGGGCACTG-GTA--CGGGG--GT---C--CA----
gi|20045 : ATTGTGCCTTC-TTT--TTGATGAATC---AG-AAAGATGC-TTTCGTT---C-GCAGT--TACA---ACATAGATTTATGCTACTGTAAAGT-----TCACAATGAG-ACT-GTAAGGGGGCAGTTTCACTGA-GGT-CACACAGTA-GGACTT-CCTGAGCACCG-CGC--CAGGGATAT---G--CA----TTTTT
Alignments
lowQualScore : 11111111111 111
lowQualScore : 444 4444 444 2 2 3 4 00000000000 2 444 333 444 0 0 77777777 1 777 2 66 2 1 6 2 22 888 33 1 33 777 0 22 444 1 2 2 2 9 1 2 2 1 2 1 2 0 2 33 888 444 33 5555
lowQualScore : ... .... ... . . . . ........... . ... ... ... . . ........ . ... . .. . . . . .. ... .. . .. ... . .. ... . . . . . . . . . . . . . . .. ... ... .. ....
lowQualScore : 444 6666 444 5 5 9 8 55555555555 5 444 111 777 1 4 44444444 0 888 5 99 5 0 5 5 44 666 11 9 44 999 4 77 444 7 5 5 5 2 2 5 5 0 5 0 5 6 5 44 999 444 44 3333
consensus : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATTTCGGGTA----G-----NT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGCG-CACGACNTTGTG---TCT-TT--TAGACG-AATCNGAGACGTG-TTTCNCT-G-C-GCAGTTANC--GCAG--AGATTTACGTTAC---AAAGT-TCGCAATGAC-TCT-GTAGGGGGACAGTTTCACAGA-GGT-CACACAGNA-GGACNT-CCTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
Reference ( family-841 ) : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATTTCGGGTA----G-----NT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGNG-CACGACNTTGTG---TCT-TT--TAGACG-AATCNGAGACGTG-TTTCNCT-G-C-GCAGTTANC--GCAG--AGATTTACGTTAC---AAAGT-TCGCAATGAC-TCT-GTAGGGGGACAGTTTCACAGA-GGT-CACACAGNA-GGACNT-CCTGGGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20029 : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATCTCGGGTA----G-----AT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGTG-CACGACATTGTG---TTG-TT--TAGACA-AATCCGAGGTGTG-TTTCACT-G-C-GCAGTTAAC--ACAG--AGATTTATATTAC---AAAGT-TTGCAATGAC-TCT-GTAGGGAGACAGTTTCACAGA-GGT-CACACAGGA-GGACTT-CCTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20030 : TCTCGCAGTGAAGTTCGCAGC---GTTT---T-CGGC---GTGGT-TTCGGACATCTCGGGTAA---G-----AT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGTG-CACGACATTGTG---TTG-TT--TAGACA-AATCCGAGGTGTG-TTTCACT-G-C-GCAGTTAAC--ACAG--AGATTTATATTAC---AAAGT-TTGCAATGAC-TCT-GTA-GGGGACAGTTTCACAGA-GGT-CACACAGGA-GGACTT-CCTGAGCAATG-CGC--GGGGA--AT---G--CA----TTTCT
gi|20031 : TCTCGCAGTTAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATCTCGGGTA----G-----TT-AGGAGTAGACTTT---C---T---CTGTAAAT---GGTG-CACGACATTATG---TCG-TT--TAGACG-AATCAGAGATGTG-TTTCACT-G-C-GCAGTTACC--ACAG--AGATTTATGTTAC---AAAGT-TCACAATGAC-TCT-CTAGGGGGACAGTTTCACAGA-GGT-CACACAGGA-GGACTT-CCTGAGTAAAG-CTT--CGGGG--AT---G--CA----TTTCT
gi|20032 : TCTCGCAGTGAAGTTCGCAGT---GTTT---ATCGGC---GTG-A-TTTGGACATCTTGGGTA----G-----CT-AGGAGTAGACTTT---C---T---CTGTAAAA---ATGG-CACGACATTGTG---TCT-TT--TGGACG-AATCTGAGAGATG-TTTTACT-A-C-ACAATTACC--ACAG--AGACTTATATTAC---AAAGT-TCACAATGAG-TCT-GTAGGGGGACGGTTTCACAGA-GGT-CACATAGGA-GGACTT-CTTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20033 : TCTCGCAGTGAAGTTCGCAGT---GTTT---TTCGGA---ATA-T-TTAGGACATTTAGGATA----A-----TT-GGGAGTAGACTCT---C---T---CTGTAAAT---AGTA-CACGACTTTGTG---CCT-TT--TAGACG-AATCCGAGATGTG-TTTCATT-G-T-ACAGTTGCC--ACAG--AGATTTATGATAC---AACGT-TCACAATGAC-TCT-GTA-GGGGACATTTTCACATA-AGT-TACAAAGTA-GGACTT-CCTGATCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20034 : TCTCACAGTAATGTTTACAGT---GTTC---ATCGGT---GTG-T-TTTGGACATTTCGGGTA----G-----GT-GGGTGTAGGCTTT---C---T---CTGTAAAT---AGGG-CACGACATTGTG---CCT-TT--TTGACG-AATCAGAGAGATG-TTTTACC-A-CAACAGTTACC--ACA---AGACTAATATTAC---AGAGT-TCACAA-GAG-TCT-GTA--GGGACAG-TTCACAGA-GGTCCACACAGTAGGGACTTGCCTGAGCACTGCCGC--CGGGA--AT---G--GA----TTTCT
gi|20035 : TTTCTCAGTGAAATTCACACA---GTTT---TTCAGT---ATG-T-GTCCGACATTTTGAGTA----G-----T----------ACTTT---C---T---CTGTACAA---ATCG-CACGACATTGTG---ATC-CT--TAGAGG-AATCGGAAAGATG-TTTCCCT-G-A-ACAGTTAGT--ACAT--AGATTTACGTTAC---AACGT-TCACATTGAC-ACT-CTAAGGGGAAAGTTTCGCAAA-GTT-CACAAAGGA-GGACTT-CCTGAGCACTG-CGC--CGGGG--GTGCAG--CA----TTTCT
gi|20036 : TCTCACAGTAATGTTTGCAGT---ATTT---GTCGGC---GTG-G-TCTGGGCAGTATGAGTA----G-----TT-AAGAA---ACTTT---C---T---GTATTTAT---AGGG-CACGACTTTGTG---TTT-TA--TTGACG-AATTCGAGAGATG-CTCCCCA-A-C-ACAG--ACCTTGCAT--AGACTTATATCAC---AACGT-TCACAGTGAC-TCT-GTAGGTGGGTAGTTTTACAGA-GGT-CACACAAAA-GGATAA-TCTGGGCTCTG-CGCAACGGG----T---C--CA----TTTCT
gi|20037 : TCTCACAATAAAGTCCCCAAC---CTTT---GTCGGT---GTG-T-TTAGGACATTTGGAATATTTTGAGAATTT-AGGAGTAA--TTT---T---T---ATGCAAGTTAAAACG-CACAACATTGTT---TTT-AT--TACAGG-AATCAGAAAGTTG-CTT-GCTAA-C-ACAGTT--C--GTAAATAGACTAATGTCGC---ACTGT-TCACA--GAC-------------ACAGT---------GGT-CCCACAGTA-CAACGT-CCTGAGCAC-G-C-------GG--AC---T--CA----TCTCT
gi|20038 : CTCACAATAGCGTTTACAGC---GGTC---TTCTGC---GTG-A-TTAGGACATTTTACGTA----G-----TT-CGGAGTAGACTTTACACATAT---ATGTATAT---AGGA-CACGATATCGTG---CTT-TT--AAGACG-AATCCGAGAGATG-TTCCCCA-A-C-ACAAGTCTT--GCAA--AGATTTACTTTAC---AAAGT-TCACAATGAC-TCT-GCATGGGCACATTTTCACATA-GGT-CACAAAGCA-GGACAT-ACTGGGCACTT-CGC--CGGGG--GT---G--CAGCATTTTCT
gi|20039 : CTTGCAATGTATTTCACAACTTTGTTT---TTCAAATAAGTG-T----ACACATTTTGGATA----A-----ATTA--AGTAGATTTT---CGTTT---TTGGGAAT---G-----ACCACTTTGTG---TTTGTTCATAG-CT-CATCAGCGACATG-TTTCCTA-A-T-TCAGGCAAT--GCAC--AGTTTGACATGAC---AGAAA-TCGCAGTTAC-ACTAGTACTATAGCCGTCTCACAAAAGGT-CACATCGGT-GGACAT-CTTGGGCACTG-TGG--CGGGG---T---GTCCA----TT
gi|20040 : CTCGCAATAAAGTTGACAGT---GTTC---TTCGAC---GTG-T-GTCGGACATTTTGAATA----G-----TT-TGGAATATATTTC---C---
gi|20041 : CTTGCAATGTAATTTACA-T---ATTTCTTTTAGAT---GTG-TACT---ACACTTTGGATA----A-----AT-CAAGGTAGATTTT---CGTTT---TTG-GAAT---GGG---ACCACTTTGTG---TTT-GTCATAGTC---ATCAGCGACGTG-TTTCCCT-A-G-GCAGGCAAT--GCAC--AGACTGACATGGC---AACGA-TCGCAGT-ACATCT-GTACTATAGCTGTCCCACAAA-GGG-CATATGGGG-TGACAT-CTTGTGCACTG-TGG--CGGGG--GT---C--CA----
gi|20042 : CAGTAAAGTTCGCAGT---GTTT---GTCGGC---ATG-T-TTCGGACATATGGGATT----G-----TT-AGAA--------C---C---T---CTGTAT-T---ACCGGTACGACTTT-----------T--TAGAGG-AATCAGAGACGTG-TTT-ACT-GAC-ACGATTAGC--GCAG--AAATTTATTTTAC---TAAGT-TCGCCATGGC-TTT-GTGGGAAGATCATGTAACAAC-AGT-CACACAGTA-AGAAGT-CCTGGACACTG-AGC--CGGGG---T---G--CA----
gi|20043 : CAGTAAAGTTCGCAGT---ATTT---GTCGAC---ATG-T-TTCGGACATATGAGAT------------T-ATTAGCAGACTAT---C---A---GTAT---T---ACCGGTACGACCTTGTG---TCT-TT--TAGAGG-AATCGGAGACGTG-CTT-ACT-GAC-ACGATTAGC--GCAG--AAATTAATTTTAC---TAAGT-TCGCCATGGC-TTT-GTGGGAAGATCACGTAACAAC-AGT-CACACAGTA-AGAAGT-CCTGGACACTG-CGC--CGGGG---T---G--CA----
gi|20044 : TTCACATC---GTTC---TTTGTC---ATG-A-GTGGTACATTCAGGGTA----G-----AG-GGGGTTAGATTTC---C---TGTCCTG--GAT----GCG-AACAAATTTGTGAG-GCT-TT--GAGGGGTCAGCTGAGAAATG-TTCCCCC-A-T-GCAGTCCTT--ACAC--AGTTTGACGAGGC---AC-GTATCGCAGTGCA-TCT-GTACCATGGCGGTCTCACACA-GGT-CACATCGCA-TCACGT-CCTGGGCACTG-GTA--CGGGG--GT---C--CA----
gi|20045 : TTGTGCCTTCT-TT--TTGATG-AATCAGAAAGATGCTTTCGTT---C-GCAGTTACA--ACAT--AGATTTATGCTACTGTAAAGT-TCACAATGAG-ACT-GTAAGGGGGCAGTTTCACTGA-GGT-CACACAGTA-GGACTT-CCTGAGCACCG-CGC--CAGGGATAT---G--CA----TTTTT
Alignments
lowQualScore : 11111111111 111
lowQualScore : 444 4444 444 2 2 3 4 00000000000 2 444 333 444 0 0 888888 5 1 777 2 66 2 1 6 2 22 888 33 1 33 777 0 22 444 1 2 2 2 9 1 2 2 1 2 1 2 2 33 888 444 33 5555
lowQualScore : ... .... ... . . . . ........... . ... ... ... . . ...... . . ... . .. . . . . .. ... .. . .. ... . .. ... . . . . . . . . . . . . . .. ... ... .. ....
lowQualScore : 444 6666 444 5 5 9 8 55555555555 5 444 111 777 1 4 999999 3 0 888 5 99 5 0 5 5 44 666 11 9 44 999 4 77 444 7 5 5 5 2 2 5 5 0 5 0 5 5 44 999 444 44 3333
consensus : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATTTCGGGTA----G-----NT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGCG-CACGACNTTGTG---TCT-TT--TAGACG-AATCNGAGACGTG-TTTCNCT-G-C-GCAGTTANC--GCAG--AGATTTACGTTAC---AAAGT-TCGCAATGAC-TCT-GTAGGGGGACAGTTTCACAGA-GGT-CACACAGNA-GGACNT-CCTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
Reference ( family-841 ) : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATTTCGGGTA----G-----NT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGCG-CACGACNTTGTG---TCT-TT--TAGACG-AATCNGAGACGTG-TTTCNCT-G-C-GCAGTTANC--GCAG--AGATTTACGTTAC---AAAGT-TCGCAATGAC-TCT-GTAGGGGGACAGTTTCACAGA-GGT-CACACAGNA-GGACNT-CCTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20029 : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATCTCGGGTA----G-----AT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGTG-CACGACATTGTG---TTG-TT--TAGACA-AATCCGAGGTGTG-TTTCACT-G-C-GCAGTTAAC--ACAG--AGATTTATATTAC---AAAGT-TTGCAATGAC-TCT-GTAGGGAGACAGTTTCACAGA-GGT-CACACAGGA-GGACTT-CCTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20030 : TCTCGCAGTGAAGTTCGCAGC---GTTT---T-CGGC---GTGGT-TTCGGACATCTCGGGTAA---G-----AT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGTG-CACGACATTGTG---TTG-TT--TAGACA-AATCCGAGGTGTG-TTTCACT-G-C-GCAGTTAAC--ACAG--AGATTTATATTAC---AAAGT-TTGCAATGAC-TCT-GTA-GGGGACAGTTTCACAGA-GGT-CACACAGGA-GGACTT-CCTGAGCAATG-CGC--GGGGA--AT---G--CA----TTTCT
gi|20031 : TCTCGCAGTTAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATCTCGGGTA----G-----TT-AGGAGTAGACTTT---C---T---CTGTAAAT---GGTG-CACGACATTATG---TCG-TT--TAGACG-AATCAGAGATGTG-TTTCACT-G-C-GCAGTTACC--ACAG--AGATTTATGTTAC---AAAGT-TCACAATGAC-TCT-CTAGGGGGACAGTTTCACAGA-GGT-CACACAGGA-GGACTT-CCTGAGTAAAG-CTT--CGGGG--AT---G--CA----TTTCT
gi|20032 : TCTCGCAGTGAAGTTCGCAGT---GTTT---ATCGGC---GTG-A-TTTGGACATCTTGGGTA----G-----CT-AGGAGTAGACTTT---C---T---CTGTAAAA---ATGG-CACGACATTGTG---TCT-TT--TGGACG-AATCTGAGAGATG-TTTTACT-A-C-ACAATTACC--ACAG--AGACTTATATTAC---AAAGT-TCACAATGAG-TCT-GTAGGGGGACGGTTTCACAGA-GGT-CACATAGGA-GGACTT-CTTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20033 : TCTCGCAGTGAAGTTCGCAGT---GTTT---TTCGGA---ATA-T-TTAGGACATTTAGGATA----A-----TT-GGGAGTAGACTCT---C---T---CTGTAAAT---AGTA-CACGACTTTGTG---CCT-TT--TAGACG-AATCCGAGATGTG-TTTCATT-G-T-ACAGTTGCC--ACAG--AGATTTATGATAC---AACGT-TCACAATGAC-TCT-GTA-GGGGACATTTTCACATA-AGT-TACAAAGTA-GGACTT-CCTGATCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20034 : TCTCACAGTAATGTTTACAGT---GTTC---ATCGGT---GTG-T-TTTGGACATTTCGGGTA----G-----GT-GGGTGTAGGCTTT---C---T---CTGTAAAT---AGGG-CACGACATTGTG---CCT-TT--TTGACG-AATCAGAGAGATG-TTTTACC-A-CAACAGTTACC--ACA---AGACTAATATTAC---AGAGT-TCACAA-GAG-TCT-GTA--GGGACAG-TTCACAGA-GGTCCACACAGTAGGGACTTGCCTGAGCACTGCCGC--CGGGA--AT---G--GA----TTTCT
gi|20035 : TTTCTCAGTGAAATTCACACA---GTTT---TTCAGT---ATG-T-GTCCGACATTTTGAGTA----G-----T----------ACTTT---C---T---CTGTACAA---ATCG-CACGACATTGTG---ATC-CT--TAGAGG-AATCGGAAAGATG-TTTCCCT-G-A-ACAGTTAGT--ACAT--AGATTTACGTTAC---AACGT-TCACATTGAC-ACT-CTAAGGGGAAAGTTTCGCAAA-GTT-CACAAAGGA-GGACTT-CCTGAGCACTG-CGC--CGGGG--GTGCAG--CA----TTTCT
gi|20036 : TCTCACAGTAATGTTTGCAGT---ATTT---GTCGGC---GTG-G-TCTGGGCAGTATGAGTA----G-----TT-AAGAA---ACTTT---C---T---GTATTTAT---AGGG-CACGACTTTGTG---TTT-TA--TTGACG-AATTCGAGAGATG-CTCCCCA-A-C-ACAG--ACCTTGCAT--AGACTTATATCAC---AACGT-TCACAGTGAC-TCT-GTAGGTGGGTAGTTTTACAGA-GGT-CACACAAAA-GGATAA-TCTGGGCTCTG-CGCAACGGG----T---C--CA----TTTCT
gi|20037 : TCTCACAATAAAGTCCCCAAC---CTTT---GTCGGT---GTG-T-TTAGGACATTTGGAATATTTTGAGAATTT-AGGAGTAA--TTT---T---T---ATGCAAGTTAAAACG-CACAACATTGTT---TTT-AT--TACAGG-AATCAGAAAGTTG-CTT-GCTAA-C-ACAGTT--C--GTAAATAGACTAATGTCGC---ACTGT-TCACA--GAC-------------ACAGT---------GGT-CCCACAGTA-CAACGT-CCTGAGCAC-G-C-------GG--AC---T--CA----TCTCT
gi|20038 : CTCACAATAGCGTTTACAGC---GGTC---TTCTGC---GTG-A-TTAGGACATTTTACGTA----G-----TT-CGGAGTAGACTTTACACATAT---ATGTATAT---AGGA-CACGATATCGTG---CTT-TT--AAGACG-AATCCGAGAGATG-TTCCCCA-A-C-ACAAGTCTT--GCAA--AGATTTACTTTAC---AAAGT-TCACAATGAC-TCT-GCATGGGCACATTTTCACATA-GGT-CACAAAGCA-GGACAT-ACTGGGCACTT-CGC--CGGGG--GT---G--CAGCATTTTCT
gi|20039 : CTTGCAATGTATTTCACAACTTTGTTT---TTCAAATAAGTG-T----ACACATTTTGGATA----A-----ATTA--AGTAGATTTT---CGTTT---TTGGGAAT---G-----ACCACTTTGTG---TTTGTTCATAG-CT-CATCAGCGACATG-TTTCCTA-A-T-TCAGGCAAT--GCAC--AGTTTGACATGAC---AGAAA-TCGCAGTTAC-ACTAGTACTATAGCCGTCTCACAAAAGGT-CACATCGGT-GGACAT-CTTGGGCACTG-TGG--CGGGG---T---GTCCA----TT
gi|20040 : CTCGCAATAAAGTTGACAGT---GTTC---TTCGAC---GTG-T-GTCGGACATTTTGAATA----G-----TT-TGGAATATATTTC---C---
gi|20041 : CTTGCAATGTAATTTACA-T---ATTTCTTTTAGAT---GTG-TACT---ACACTTTGGATA----A-----AT-CAAGGTAGATTTT---CGTTT---TTG-GAAT---GG-G--ACCACTTTGTG---TTT-GTCATAGTC---ATCAGCGACGTG-TTTCCCT-A-G-GCAGGCAAT--GCAC--AGACTGACATGGC---AACGA-TCGCAGT-ACATCT-GTACTATAGCTGTCCCACAAA-GGG-CATATGGGG-TGACAT-CTTGTGCACTG-TGG--CGGGG--GT---C--CA----
gi|20042 : CAGTAAAGTTCGCAGT---GTTT---GTCGGC---ATG-T-TTCGGACATATGGGATT----G-----TT-AGAA--------C---C---T---CTGTAT-T---ACCGGTACGACTTT-----------T--TAGAGG-AATCAGAGACGTG-TTT-ACT-GAC-ACGATTAGC--GCAG--AAATTTATTTTAC---TAAGT-TCGCCATGGC-TTT-GTGGGAAGATCATGTAACAAC-AGT-CACACAGTA-AGAAGT-CCTGGACACTG-AGC--CGGGG---T---G--CA----
gi|20043 : CAGTAAAGTTCGCAGT---ATTT---GTCGAC---ATG-T-TTCGGACATATGAGAT------------T-ATTAGCAGACTAT---C---A---GTAT---T---ACCGGTACGACCTTGTG---TCT-TT--TAGAGG-AATCGGAGACGTG-CTT-ACT-GAC-ACGATTAGC--GCAG--AAATTAATTTTAC---TAAGT-TCGCCATGGC-TTT-GTGGGAAGATCACGTAACAAC-AGT-CACACAGTA-AGAAGT-CCTGGACACTG-CGC--CGGGG---T---G--CA----
gi|20044 : TTCACATC---GTTC---TTTGTC---ATG-A-GTGGTACATTCAGGGTA----G-----AG-GGGGTTAGATTTC---C---TGTCCTG--GAT----GCG-AACAAATTTGTGAG-GCT-TT--GAGGGGTCAGCTGAGAAATG-TTCCCCC-A-T-GCAGTCCTT--ACAC--AGTTTGACGAGGC---AC-GTATCGCAGTGCA-TCT-GTACCATGGCGGTCTCACACA-GGT-CACATCGCA-TCACGT-CCTGGGCACTG-GTA--CGGGG--GT---C--CA----
gi|20045 : TTGTGCCTTCT-TT--TTGATG-AATCAGAAAGATGCTTTCGTT---C-GCAGTTACA--ACAT--AGATTTATGCTACTGTAAAGT-TCACAATGAG-ACT-GTAAGGGGGCAGTTTCACTGA-GGT-CACACAGTA-GGACTT-CCTGAGCACCG-CGC--CAGGGATAT---G--CA----TTTTT
blockSeqs : TTT CTTT TAA G A C C TTTTGAGAATT T ACA ATA GTC TAAAAC G A CCT G CA T C T C CA AA AA A TT AAT TA TGT A A A A G G A C G G T G C AA ATA GCA TC GCAT
blockSeqs : . T . . . C C AGA . . GTT . AGT G A AG . CA . A T . CA GA G C . G TG . A . . . G G . . G . T . . . A . . .
blockSeqs : . T . . . T T GT . . GTT . GGT . A . . . . T G . TA GA G C . G TA . A . . . A G . . G . T . . . A . . .
blockSeqs : . A . . . A A GC . . . . ATG . T . . . . C T . CA G A C . G TG . C . . . G T . . T . T . . . A . . .
blockSeqs : . T . . . T C AT . . . . AGT . A . . . . A G . TA G A C . G TA . A . . . T G . . T . T . . . A . . .
blockSeqs : . A . . . C T GG . . . . AGG . A . . . . G G . CC A A G . T CG . C . . . C A . . G . T . . . A . . .
blockSeqs : . T . . . T T GT . . . . ATC . T . . . . C G . CC G A C . T TA . C . . . C G . . A . A . . . G . . .
blockSeqs : . G . . . A G GT . . . . AGG . A . . . . A G . CC A A T . A TG . T . . . G T . . T . G . . . A . . .
blockSeqs : . G . . . A T GT . . . . AGG . A . . . . C G . CC G A A . C CT . A . . . G A . . C . A . . . G . . .
blockSeqs : . T . . . C T AA . . . . ACC . T . . . . A C . CC A T A . C CA . A . . . C A . . G . A . . . G . . .
blockSeqs : . T . . . C T GT . . . . ACC . T . . . . A C . CC A G G . G CA . C . . . A A . . G . A . . . G . . .
blockSeqs : . T . . . C T AA . . . . GG . T . . . . A C . CG A A G . G TT . A . . . . A . . T . G . . . . . . .
blockSeqs : . G . . . G G GT . . . . GC . C . . . . G C . G A A T . C TT . A . . . . C . . T . G . . . . . . .
blockSeqs : . G . . . . G GA . . . . G . T . . . . T A . A A G C . T CG . A . . . . G . . C . G . . . . . . .
blockSeqs : . T . . . . A . . . . . . . . A G . A . G . . . TG . . . . . . . . . T . T . . . . . . .
blockSeqCons :
originalCons : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATTTCGGGTA----G-----NT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGCG-CACGACNTTGTG---TCT-TT--TAGACG-AATCNGAGACGTG-TTTCNCT-G-C-GCAGTTANC--GCAG--AGATTTACGTTAC---AAAGT-TCGCAATGAC-TCT-GTAGGGGGACAGTTTCACAGA-GGT-CACACAGNA-GGACNT-CCTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
finalCons : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATTTCGGGTA----G-----NT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGCG-CACGACNTTGTG---TCT-TT--TAGACG-AATCNGAGACGTG-TTTCNCT-G-C-GCAGTTANC--GCAG--AGATTTACGTTAC---AAAGT-TCGCAATGAC-TCT-GTAGGGGGACAGTTTCACAGA-GGT-CACACAGNA-GGACNT-CCTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
Alignments
lowQualScore : 11111111111 111
lowQualScore : 444 4444 444 2 2 3 4 00000000000 2 444 333 444 0 0 888888 5 1 777 2 66 2 1 6 2 22 888 33 1 33 777 0 22 444 1 2 2 2 9 1 2 2 1 2 1 2 2 33 888 444 33 5555
lowQualScore : ... .... ... . . . . ........... . ... ... ... . . ...... . . ... . .. . . . . .. ... .. . .. ... . .. ... . . . . . . . . . . . . . .. ... ... .. ....
lowQualScore : 444 6666 444 5 5 9 8 55555555555 5 444 111 777 1 4 999999 3 0 888 5 99 5 0 5 5 44 666 11 9 44 999 4 77 444 7 5 5 5 2 2 5 5 0 5 0 5 5 44 999 444 44 3333
consensus : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATTTCGGGTA----G-----NT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGCG-CACGACNTTGTG---TCT-TT--TAGACG-AATCNGAGACGTG-TTTCNCT-G-C-GCAGTTANC--GCAG--AGATTTACGTTAC---AAAGT-TCGCAATGAC-TCT-GTAGGGGGACAGTTTCACAGA-GGT-CACACAGNA-GGACNT-CCTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
Reference ( family-841 ) : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATTTCGGGTA----G-----NT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGCG-CACGACNTTGTG---TCT-TT--TAGACG-AATCNGAGACGTG-TTTCNCT-G-C-GCAGTTANC--GCAG--AGATTTACGTTAC---AAAGT-TCGCAATGAC-TCT-GTAGGGGGACAGTTTCACAGA-GGT-CACACAGNA-GGACNT-CCTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20029 : TCTCGCAGTGAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATCTCGGGTA----G-----AT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGTG-CACGACATTGTG---TTG-TT--TAGACA-AATCCGAGGTGTG-TTTCACT-G-C-GCAGTTAAC--ACAG--AGATTTATATTAC---AAAGT-TTGCAATGAC-TCT-GTAGGGAGACAGTTTCACAGA-GGT-CACACAGGA-GGACTT-CCTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20030 : TCTCGCAGTGAAGTTCGCAGC---GTTT---T-CGGC---GTGGT-TTCGGACATCTCGGGTAA---G-----AT-AGGAGTAGACTTT---C---T---CTGTAAAT---AGTG-CACGACATTGTG---TTG-TT--TAGACA-AATCCGAGGTGTG-TTTCACT-G-C-GCAGTTAAC--ACAG--AGATTTATATTAC---AAAGT-TTGCAATGAC-TCT-GTA-GGGGACAGTTTCACAGA-GGT-CACACAGGA-GGACTT-CCTGAGCAATG-CGC--GGGGA--AT---G--CA----TTTCT
gi|20031 : TCTCGCAGTTAAGTTCGCAGC---GTTT---TTCGGC---GTG-T-TTCGGACATCTCGGGTA----G-----TT-AGGAGTAGACTTT---C---T---CTGTAAAT---GGTG-CACGACATTATG---TCG-TT--TAGACG-AATCAGAGATGTG-TTTCACT-G-C-GCAGTTACC--ACAG--AGATTTATGTTAC---AAAGT-TCACAATGAC-TCT-CTAGGGGGACAGTTTCACAGA-GGT-CACACAGGA-GGACTT-CCTGAGTAAAG-CTT--CGGGG--AT---G--CA----TTTCT
gi|20032 : TCTCGCAGTGAAGTTCGCAGT---GTTT---ATCGGC---GTG-A-TTTGGACATCTTGGGTA----G-----CT-AGGAGTAGACTTT---C---T---CTGTAAAA---ATGG-CACGACATTGTG---TCT-TT--TGGACG-AATCTGAGAGATG-TTTTACT-A-C-ACAATTACC--ACAG--AGACTTATATTAC---AAAGT-TCACAATGAG-TCT-GTAGGGGGACGGTTTCACAGA-GGT-CACATAGGA-GGACTT-CTTGAGCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20033 : TCTCGCAGTGAAGTTCGCAGT---GTTT---TTCGGA---ATA-T-TTAGGACATTTAGGATA----A-----TT-GGGAGTAGACTCT---C---T---CTGTAAAT---AGTA-CACGACTTTGTG---CCT-TT--TAGACG-AATCCGAGATGTG-TTTCATT-G-T-ACAGTTGCC--ACAG--AGATTTATGATAC---AACGT-TCACAATGAC-TCT-GTA-GGGGACATTTTCACATA-AGT-TACAAAGTA-GGACTT-CCTGATCACTG-CGC--CGGGG--AT---G--CA----TTTCT
gi|20034 : TCTCACAGTAATGTTTACAGT---GTTC---ATCGGT---GTG-T-TTTGGACATTTCGGGTA----G-----GT-GGGTGTAGGCTTT---C---T---CTGTAAAT---AGGG-CACGACATTGTG---CCT-TT--TTGACG-AATCAGAGAGATG-TTTTACC-A-CAACAGTTACC--ACA---AGACTAATATTAC---AGAGT-TCACAA-GAG-TCT-GTA--GGGACAG-TTCACAGA-GGTCCACACAGTAGGGACTTGCCTGAGCACTGCCGC--CGGGA--AT---G--GA----TTTCT
gi|20035 : TTTCTCAGTGAAATTCACACA---GTTT---TTCAGT---ATG-T-GTCCGACATTTTGAGTA----G-----T----------ACTTT---C---T---CTGTACAA---ATCG-CACGACATTGTG---ATC-CT--TAGAGG-AATCGGAAAGATG-TTTCCCT-G-A-ACAGTTAGT--ACAT--AGATTTACGTTAC---AACGT-TCACATTGAC-ACT-CTAAGGGGAAAGTTTCGCAAA-GTT-CACAAAGGA-GGACTT-CCTGAGCACTG-CGC--CGGGG--GTGCAG--CA----TTTCT
gi|20036 : TCTCACAGTAATGTTTGCAGT---ATTT---GTCGGC---GTG-G-TCTGGGCAGTATGAGTA----G-----TT-AAGAA---ACTTT---C---T---GTATTTAT---AGGG-CACGACTTTGTG---TTT-TA--TTGACG-AATTCGAGAGATG-CTCCCCA-A-C-ACAG--ACCTTGCAT--AGACTTATATCAC---AACGT-TCACAGTGAC-TCT-GTAGGTGGGTAGTTTTACAGA-GGT-CACACAAAA-GGATAA-TCTGGGCTCTG-CGCAACGGG----T---C--CA----TTTCT
gi|20037 : TCTCACAATAAAGTCCCCAAC---CTTT---GTCGGT---GTG-T-TTAGGACATTTGGAATATTTTGAGAATTT-AGGAGTAA--TTT---T---T---ATGCAAGTTAAAACG-CACAACATTGTT---TTT-AT--TACAGG-AATCAGAAAGTTG-CTT-GCTAA-C-ACAGTT--C--GTAAATAGACTAATGTCGC---ACTGT-TCACA--GAC-------------ACAGT---------GGT-CCCACAGTA-CAACGT-CCTGAGCAC-G-C-------GG--AC---T--CA----TCTCT
gi|20038 : CTCACAATAGCGTTTACAGC---GGTC---TTCTGC---GTG-A-TTAGGACATTTTACGTA----G-----TT-CGGAGTAGACTTTACACATAT---ATGTATAT---AGGA-CACGATATCGTG---CTT-TT--AAGACG-AATCCGAGAGATG-TTCCCCA-A-C-ACAAGTCTT--GCAA--AGATTTACTTTAC---AAAGT-TCACAATGAC-TCT-GCATGGGCACATTTTCACATA-GGT-CACAAAGCA-GGACAT-ACTGGGCACTT-CGC--CGGGG--GT---G--CAGCATTTTCT
gi|20039 : CTTGCAATGTATTTCACAACTTTGTTT---TTCAAATAAGTG-T----ACACATTTTGGATA----A-----ATTA--AGTAGATTTT---CGTTT---TTGGGAAT---G-----ACCACTTTGTG---TTTGTTCATAG-CT-CATCAGCGACATG-TTTCCTA-A-T-TCAGGCAAT--GCAC--AGTTTGACATGAC---AGAAA-TCGCAGTTAC-ACTAGTACTATAGCCGTCTCACAAAAGGT-CACATCGGT-GGACAT-CTTGGGCACTG-TGG--CGGGG---T---GTCCA----TT
gi|20040 : CTCGCAATAAAGTTGACAGT---GTTC---TTCGAC---GTG-T-GTCGGACATTTTGAATA----G-----TT-TGGAATATATTTC---C---
gi|20041 : CTTGCAATGTAATTTACA-T---ATTTCTTTTAGAT---GTG-TACT---ACACTTTGGATA----A-----AT-CAAGGTAGATTTT---CGTTT---TTG-GAAT---GG-G--ACCACTTTGTG---TTT-GTCATAGTC---ATCAGCGACGTG-TTTCCCT-A-G-GCAGGCAAT--GCAC--AGACTGACATGGC---AACGA-TCGCAGT-ACATCT-GTACTATAGCTGTCCCACAAA-GGG-CATATGGGG-TGACAT-CTTGTGCACTG-TGG--CGGGG--GT---C--CA----
gi|20042 : CAGTAAAGTTCGCAGT---GTTT---GTCGGC---ATG-T-TTCGGACATATGGGATT----G-----TT-AGAA--------C---C---T---CTGTAT-T---ACCGGTACGACTTT-----------T--TAGAGG-AATCAGAGACGTG-TTT-ACT-GAC-ACGATTAGC--GCAG--AAATTTATTTTAC---TAAGT-TCGCCATGGC-TTT-GTGGGAAGATCATGTAACAAC-AGT-CACACAGTA-AGAAGT-CCTGGACACTG-AGC--CGGGG---T---G--CA----
gi|20043 : CAGTAAAGTTCGCAGT---ATTT---GTCGAC---ATG-T-TTCGGACATATGAGAT------------T-ATTAGCAGACTAT---C---A---GTAT---T---ACCGGTACGACCTTGTG---TCT-TT--TAGAGG-AATCGGAGACGTG-CTT-ACT-GAC-ACGATTAGC--GCAG--AAATTAATTTTAC---TAAGT-TCGCCATGGC-TTT-GTGGGAAGATCACGTAACAAC-AGT-CACACAGTA-AGAAGT-CCTGGACACTG-CGC--CGGGG---T---G--CA----
gi|20044 : TTCACATC---GTTC---TTTGTC---ATG-A-GTGGTACATTCAGGGTA----G-----AG-GGGGTTAGATTTC---C---TGTCCTG--GAT----GCG-AACAAATTTGTGAG-GCT-TT--GAGGGGTCAGCTGAGAAATG-TTCCCCC-A-T-GCAGTCCTT--ACAC--AGTTTGACGAGGC---AC-GTATCGCAGTGCA-TCT-GTACCATGGCGGTCTCACACA-GGT-CACATCGCA-TCACGT-CCTGGGCACTG-GTA--CGGGG--GT---C--CA----
gi|20045 : TTGTGCCTTCT-TT--TTGATG-AATCAGAAAGATGCTTTCGTT---C-GCAGTTACA--ACAT--AGATTTATGCTACTGTAAAGT-TCACAATGAG-ACT-GTAAGGGGGCAGTTTCACTGA-GGT-CACACAGTA-GGACTT-CCTGAGCACCG-CGC--CAGGGATAT---G--CA----TTTTT