lowQualScore : 2 111111 11111
lowQualScore : 2 2 2 2 2 33 33 4 2 44 33 5 8888 2 2 2 2 66666 5555 777 2 44 2 2 2 555555 2 2 11111 3 2 2 2 2 66 2 33 4444 2 33 33 5555 8 2 2 555 555 2
lowQualScore : . . . . . .. .. . . .. .. . .... . . . . ..... .... ... . .. . . . ...... . . ..... . . . . . .. . .. .... . .. .. .... . . . ... ... .
lowQualScore : 7 7 7 7 7 77 77 0 7 00 77 3 3333 7 7 7 7 77777 7777 333 7 55 7 7 9 444444 9 9 77777 4 7 7 7 7 33 7 77 7777 7 77 77 7777 0 9 9 000 000 9
consensus : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TC-G--AA--AAAT-TAG-AA--TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATATCT-ATAAG-GGC--C-GG-T-AAGTAC---G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--G-CAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
Reference ( gi|100775 ) : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TC-G--AA--AA-T-TAA-AA--TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATATCT-ATAAG-GGC--C-AG-T-AAGTAC---A-AATTTTTCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--G-TAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100776 : ACCCATTTTTTCGG-G-GTTT-TGCAAAAGTG-TC-G--AA--AAAT-TAG-AA--TT-TG----AAAACT-TTT-GG-TATGAT-T-----CCC----TTTATACC-GG-AAAG-ATCCATATCT-ATAAG-GGC--T-GG-T-AAGTAC---G-AATTTTTCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--G-CAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100777 : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTA-TC-G--AA--AAAT-TAG-AA--TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AA-T-ATCGATATTT-ATAAG-GGCTGC-GG-T-AAGTAC---G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AT--G-GG-CCG--G-CAT----T-A-CTC-TCAGTG---TAAC---CCGAA-TAAT
gi|100772 : ACCCATTTTTTCAG-G-AGTT-TGCAAAAGTG-TC-G--AA--AAGT-TAA-AA--TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---AAC-GG-AAAG-ATTGATATTTTATAAG-GGC--C-GG-T-AAGTAC---G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--C-GG-TTG--G-CAA----T-A-CAC-TCATTG---TAAC---CCGAA-TAAT
gi|100779 : ACCCATTTCTTCAG-G-ATTT-TGCAAAAGTG-TC-G--AA--AA-T-TTG-AA--TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TA---AC---G-GAAG-ATCGATATCT-ACAAG-GG---C-GG-T-ATGTAC---GCAATTTTTCA-GGATC-AT-A-CAC--ATGTG-T--AC--G-GGCCCG--G-TAT----TAA-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100774 : ACACATTTTTTCAG-G-AGTT-TGC-AAAGTG-TC-G--AA--AAGT-TAA-AA--TT-TG----AAAACT-TTT-GG-TATGA--T-----TCC----TT---AAC-GG---AG-ATTGAATTTT-ATAAG-GG---C-GG-T-AAGTAC---G-AATTTTCCA-GGAT--AT-A-CAC--AAGTG-T--AC--C-GG-TTG--G-CAA----T-A-CAC-TC-TTG---TAA----CCGAA-TAAT
gi|100773 : ACACATTTTTTCAG-G-AGTT-TGC-AAAGTG-TC-G--AA--AAGT-TAA-AA--TT-TG----AAAACT-TTT-GG-TATGA--T-----TCC----TT---AAC-GG---AG-ATTGAATTTT-ATAAG-GG---C-GG-T-AAGTAC---G-AATTTTCCA-GGAT--AT-A-CAC--AAGTG-T--AC--C-GG-TTG--G-CAA----T-A-CAC-TC-TTG---TAA----CCGAA-TAAT
gi|100781 : ACCCATTTTTTCAG-G-ATTG-GGCAAAAGTGCTCAA--AA--AA-T-TAG-CA--TT-TGAAAAAAAAC--TTT-GG-TATGAT-TTTTTCTCC----TTC--ACT-GG--AAG-ATCGATATTT-ATAAGCGGC--T-TG-TAAAGTAT---G-GAATTTCCA-GGATC-A--A-CAC--AAGTG-TAAAC--GAGA-CCG--G-CAT----TCA-CAC-TCAGTG---TAACCCACCGAATTAAT
gi|100782 : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TC-G--AA--AAAT-TAG-AA--TT-TG----AAAACT-TTT-GG-TATGAC-T-----TTC----TT---ACC-GG-AAAG-ATCGATATCT-ATAA
gi|100778 : CCATTTTTTCCG-G-ATTT-TGCAAAAGTG-TC-G--AA--AAAT-TAG-AA--TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATATCT-ATAAG-GGC--C-GG-T-AAGTAC---A-AA-TTTTCA-GGAT--AT-GCCAC--AATTG-T--AC--G-GG-CTG--G-TAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100783 : acaCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TC-G--AA--AA-A-TAG-AA--TT-TG----AAAACT-TTTAAA-TATGAT-T-----TCC----AT---ACC-AGCAAAG-ATCGATATTT--TAAG-GGC--C-GT-T-AAGTAC---G-AATTTCCGA-AGATC-AT-A-CACA-AAGTG-T--AC--G-GG-CCG--GCTA-------A-TAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100784 : TTTTTTCAG-G-ATTT-TGCAAAAGTG-TC-G--AAAGAA-TGTAA-AA--TTCTGA---AAAACTGTTT-GG-TATGAT-T-----TCC----TT---ACCGGG-AAAG-ATCGATATCT-ATAAG-GGCCTC-AGCT-AAGTATCGGA-AA-TTTTCA-GG-TC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--G-TAT----T-CTCAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100780 : TTTTTTCAA-G-AATT-TGCAAAGGT---C-G--AA--AAAT-CAAGAA--TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---A-T-GG-AAAG-ATCAATATAT-ATAAG-GG---C-GG-T-AATTAC---G-AA-TTTTCA--GATC-AT-A-CAC--AAGTG-T--AC--G-GG-CT---G-CATTAAAT-A-CAC-TCAGTG---T-AC---CCGAA-TAAT
gi|100785 : acaccTTTTTTCAGCGCATTTATGCAAAAGTG-TC-GCAAA--AA-T-CTT-AA--TTGTG----AAAACT-T---GGCTATGAT-T-----TCCACACTT---ACC-AG-AAAGTATCGATATCT-ATAAG-GGC--CGGG-T-ACGTAC---G-AATTTTTCA-GGATCAATAA-CAC--AAGTGTT--AC--G-GG-CCGGAG-TAT----T-A-AAC-CCAGTGTGTTAAC---CT-AA-TAA
gi|100786 : TTGTTCAG-G-ATTT-TGCAAAAGTG-TC-G--AA--AAAT-TAA-GAAGTT-TG----AAAACT-TTT-GG-TGTGATGT-----TCC----TT---ACC-AG-AAAA-ATCGATATCT-ATAAG-GGC--C-GG-T-AAGTAC---G-AATTTTTCAGGGATC-AT-A-CAC--AAATG-T--ACGGG-GG-CCG--G-CAT----TAA-CACTTCAGTG---TAAC---CCGAG-
gi|100787 : TTTTTCAA-G-ATTT--GCAAAAGTG-TC-G--AA--AA-A-TTC-GA--TT-TG----AAAACT-TT---G-TATGAT-T-----TCC----TT---AC--GG-AAAG-ATCGATATCT-ATA-G-GGC--C--G-T-AAGTAC---G-A-TTTTTCA-GGATC-AT-A-CACTAAAGTG----AC----GG-CCG--G-CAT----T-A-CAC-TCAGTG---TAAC---CCAGA-TAAT
gi|100788 : A-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--G-CAT----T-
Alignments
lowQualScore : 2 2 2 2 2 2 2 5 2 5 7777 2 2 2 2 66666 5555 666 2 66 2 2 2 777 777 2 33 2 0 2 2 2 2 55 2 33 3333 2 33 5555 7 2 2 444 444 2
lowQualScore : . . . . . . . . . . .... . . . . ..... .... ... . .. . . . ... ... . .. . . . . . . .. . .. .... . .. .... . . . ... ... .
lowQualScore : 5 5 5 5 5 5 5 0 5 0 8888 5 5 5 5 22222 3333 999 5 77 5 5 7 000 333 7 77 7 8 5 5 5 5 99 5 44 8888 5 44 3333 5 7 7 777 777 7
consensus : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
Reference ( family-836 ) : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100772 : ACCCATTTTTTCAG-G-AGTT-TGCAAAAGTG-TCG-AAA-AGT-TA-AAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---AAC-GG-AAAG-ATTGATATTTTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--C-GG-TTG--GCAA----T-A-CAC-TCATTG---TAAC---CCGAA-TAAT
gi|100773 : ACACATTTTTTCAG-G-AGTT-TGCAAA-GTG-TCG-AAA-AGT-TA-AAA-TT-TG----AAAACT-TTT-GG-TATGA--T-----TCC----TT---AAC-GG---AG-ATTGAAT-TTTATAAG-GG---C---GGT-AAGTAC--G-AATTTTCCA-GGAT--AT-A-CAC--AAGTG-T--AC--C-GG-TTG--GCAA----T-A-CAC-TC-TTG---TAA----CCGAA-TAAT
gi|100774 : ACACATTTTTTCAG-G-AGTT-TGCAAA-GTG-TCG-AAA-AGT-TA-AAA-TT-TG----AAAACT-TTT-GG-TATGA--T-----TCC----TT---AAC-GG---AG-ATTGAAT-TTTATAAG-GG---C---GGT-AAGTAC--G-AATTTTCCA-GGAT--AT-A-CAC--AAGTG-T--AC--C-GG-TTG--GCAA----T-A-CAC-TC-TTG---TAA----CCGAA-TAAT
gi|100775 : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-A-T-TA-AAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---AGT-AAGTAC--A-AATTTTTCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GTAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100776 : ACCCATTTTTTCGG-G-GTTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----CCC----TTTATACC-GG-AAAG-ATCCATA-TCTATAAG-GGC--T---GGT-AAGTAC--G-AATTTTTCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100777 : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTA-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG--AAT-ATCGATA-TTTATAAG-GGCTGC---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AT--G-GG-CCG--GCAT----T-A-CTC-TCAGTG---TAAC---CCGAA-TAAT
gi|100778 : CCATTTTTTCCG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--A-AATTTT-CA-GGAT--AT-GCCAC--AATTG-T--AC--G-GG-CTG--GTAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100779 : acaACCCATTTCTTCAG-G-ATTT-TGCAAAAGTG-TCG--AA-AAT-TT-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TA---AC---G-GAAG-ATCGATA-TCTACAAG-GG---C---GGT-ATGTAC--GCAATTTTTCA-GGATC-AT-A-CAC--ATGTG-T--AC--G-GGCCCG--GTAT----TAA-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100780 : TTTTTTCAA-G-AATT-TGCAAAGGT---CG-AAA-AAT-CAAGAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---A-T-GG-AAAG-ATCAATA-TATATAAG-GG---C---GGT-AATTAC--G-AATTTTC---AGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CT---GCATTAAAT-A-CAC-TCAGTG---T-AC---CCGAA-TAAT
gi|100781 : acaccACCCATTTTTTCAG-G-ATTG-GGCAAAAGTGCTCA-AAA-AAT-TA-GCA-TT-TGAAAAAAAAC--TTT-GG-TATGAT-TTTTTCTCC----TTC--ACT-GG--AAG-ATCGATA-TTTATAAGCGGC--T---TGTAAAGTAT--G-GAATTTCCA-GGATC-A--A-CAC--AAGTG-TAAAC--GAGA-CCG--GCAT----TCA-CAC-TCAGTG---TAACCCACCGAATTAAT
gi|100782 : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAC-T-----TTC----TT---ACC-GG-AAAG-ATCGATA-TCTATAA
gi|100783 : CATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AA--TA-GAA-TT-TG----AAAACT-TTTAAA-TATGAT-T-----TCC----AT---ACC-AGCAAAG-ATCGATA-TTT-TAAG-GGC--C---GTT-AAGTAC--G-AATTTCCGA-AGATC-AT-A-CACA-AAGTG-T--AC--G-GG-CCG--GC-T----A-A-TAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100784 : TTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAAGAATGTA-AAA-TTCTGA---AAAACTGTTT-GG-TATGAT-T-----TCC----TT---ACCGGG-AAAG-ATCGATA-TCTATAAG-GGC--CTCAGCT-AAGTATCGG-AAATTTTCA-GG-TC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GTAT----T-CTCAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100785 : TTTTTTCAGCGCATTTATGCAAAAGTG-TCGCAAA-AAT-CT-TAA-TTGTG----AAAACT-T---GGCTATGAT-T-----TCCACACTT---ACC-AG-AAAGTATCGATA-TCTATAAG-GGC--CG--GGT-ACGTAC--G-AATTTTTCA-GGATCAATAA-CAC--AAGTGTT--AC--G-GG-CCGGAGTAT----T-A-AAC-CCAGTGTGTTAAC---CT-AA-TAA
gi|100786 : TTGTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TAAGAAGTT-TG----AAAACT-TTT-GG-TGTGATGT-----TCC----TT---ACC-AG-AAAA-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTTCAGGGATC-AT-A-CAC--AAATG-T--ACGGG-GG-CCG--GCAT----TAA-CACTTCAGTG---TAAC---CCGAG-
gi|100787 : TTTTTCAA-G-ATTT--GCAAAAGTG-TCG-AAA-AAT-TC-GA--TT-TG----AAAACT-TT---G-TATGAT-T-----TCC----TT---AC--GG-AAAG-ATCGATA-TCTATA-G-GGC--C---G-T-AAGTAC--G-A-TTTTTCA-GGATC-AT-A-CACTAAAGTG----AC----GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCAGA-TAAT
gi|100788 : A-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-
Alignments
lowQualScore : 2 2 2 2 2 2 2 5 2 5 7777 2 2 2 2 66666 5555 666 2 66 2 2 2 777 777 2 33 2 0 2 2 2 2 55 2 33 3333 2 33 5555 7 2 2 444 444 2
lowQualScore : . . . . . . . . . . .... . . . . ..... .... ... . .. . . . ... ... . .. . . . . . . .. . .. .... . .. .... . . . ... ... .
lowQualScore : 5 5 5 5 5 5 5 0 5 0 8888 5 5 5 5 22222 3333 999 5 77 5 5 7 000 333 7 77 7 8 5 5 5 5 99 5 44 8888 5 44 3333 5 7 7 777 777 7
consensus : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
Reference ( family-836 ) : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100772 : ACCCATTTTTTCAG-G-AGTT-TGCAAAAGTG-TCG-AAA-AGT-TA-AAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---AAC-GG-AAAG-ATTGATATTTTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--C-GG-TTG--GCAA----T-A-CAC-TCATTG---TAAC---CCGAA-TAAT
gi|100773 : ACACATTTTTTCAG-G-AGTT-TGCAAA-GTG-TCG-AAA-AGT-TA-AAA-TT-TG----AAAACT-TTT-GG-TATGA--T-----TCC----TT---AAC-GG---AG-ATTGAAT-TTTATAAG-GG---C---GGT-AAGTAC--G-AATTTTCCA-GGAT--AT-A-CAC--AAGTG-T--AC--C-GG-TTG--GCAA----T-A-CAC-TC-TTG---TAA----CCGAA-TAAT
gi|100774 : ACACATTTTTTCAG-G-AGTT-TGCAAA-GTG-TCG-AAA-AGT-TA-AAA-TT-TG----AAAACT-TTT-GG-TATGA--T-----TCC----TT---AAC-GG---AG-ATTGAAT-TTTATAAG-GG---C---GGT-AAGTAC--G-AATTTTCCA-GGAT--AT-A-CAC--AAGTG-T--AC--C-GG-TTG--GCAA----T-A-CAC-TC-TTG---TAA----CCGAA-TAAT
gi|100775 : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-A-T-TA-AAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---AGT-AAGTAC--A-AATTTTTCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GTAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100776 : ACCCATTTTTTCGG-G-GTTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----CCC----TTTATACC-GG-AAAG-ATCCATA-TCTATAAG-GGC--T---GGT-AAGTAC--G-AATTTTTCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100777 : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTA-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG--AAT-ATCGATA-TTTATAAG-GGCTGC---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AT--G-GG-CCG--GCAT----T-A-CTC-TCAGTG---TAAC---CCGAA-TAAT
gi|100778 : CCATTTTTTCCG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--A-AATTTT-CA-GGAT--AT-GCCAC--AATTG-T--AC--G-GG-CTG--GTAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100779 : acaACCCATTTCTTCAG-G-ATTT-TGCAAAAGTG-TCG--AA-AAT-TT-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TA---AC---G-GAAG-ATCGATA-TCTACAAG-GG---C---GGT-ATGTAC--GCAATTTTTCA-GGATC-AT-A-CAC--ATGTG-T--AC--G-GGCCCG--GTAT----TAA-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100780 : TTTTTTCAA-G-AATT-TGCAAAGGT---CG-AAA-AAT-CAAGAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---A-T-GG-AAAG-ATCAATA-TATATAAG-GG---C---GGT-AATTAC--G-AATTTTC---AGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CT---GCATTAAAT-A-CAC-TCAGTG---T-AC---CCGAA-TAAT
gi|100781 : acaccACCCATTTTTTCAG-G-ATTG-GGCAAAAGTGCTCA-AAA-AAT-TA-GCA-TT-TGAAAAAAAAC--TTT-GG-TATGAT-TTTTTCTCC----TTC--ACT-GG--AAG-ATCGATA-TTTATAAGCGGC--T---TGTAAAGTAT--G-GAATTTCCA-GGATC-A--A-CAC--AAGTG-TAAAC--GAGA-CCG--GCAT----TCA-CAC-TCAGTG---TAACCCACCGAATTAAT
gi|100782 : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAC-T-----TTC----TT---ACC-GG-AAAG-ATCGATA-TCTATAA
gi|100783 : CATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AA--TA-GAA-TT-TG----AAAACT-TTTAAA-TATGAT-T-----TCC----AT---ACC-AGCAAAG-ATCGATA-TTT-TAAG-GGC--C---GTT-AAGTAC--G-AATTTCCGA-AGATC-AT-A-CACA-AAGTG-T--AC--G-GG-CCG--GC-T----A-A-TAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100784 : TTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAAGAATGTA-AAA-TTCTGA---AAAACTGTTT-GG-TATGAT-T-----TCC----TT---ACCGGG-AAAG-ATCGATA-TCTATAAG-GGC--CTCAGCT-AAGTATCGG-AAATTTTCA-GG-TC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GTAT----T-CTCAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100785 : TTTTTTCAGCGCATTTATGCAAAAGTG-TCGCAAA-AAT-CT-TAA-TTGTG----AAAACT-T---GGCTATGAT-T-----TCCACACTT---ACC-AG-AAAGTATCGATA-TCTATAAG-GGC--CG--GGT-ACGTAC--G-AATTTTTCA-GGATCAATAA-CAC--AAGTGTT--AC--G-GG-CCGGAGTAT----T-A-AAC-CCAGTGTGTTAAC---CT-AA-TAA
gi|100786 : TTGTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TAAGAAGTT-TG----AAAACT-TTT-GG-TGTGATGT-----TCC----TT---ACC-AG-AAAA-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTTCAGGGATC-AT-A-CAC--AAATG-T--ACGGG-GG-CCG--GCAT----TAA-CACTTCAGTG---TAAC---CCGAG-
gi|100787 : TTTTTCAA-G-ATTT--GCAAAAGTG-TCG-AAA-AAT-TC-GA--TT-TG----AAAACT-TT---G-TATGAT-T-----TCC----TT---AC--GG-AAAG-ATCGATA-TCTATA-G-GGC--C---G-T-AAGTAC--G-A-TTTTTCA-GGATC-AT-A-CACTAAAGTG----AC----GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCAGA-TAAT
gi|100788 : A-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-
blockSeqs : C C A C C G G A G C AAAA G A C G TTTTC ACAC TAT G CA T . C CTG TCA A CG C G A A C TA T AA GGG C GA TAAA A T T TGT CCA T
blockSeqs : . . . . . . . A . G A . . . . . . C . A . . . C G . . . . . . . A . . GA . . . C . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . A . . . C . . . . . . . . . . . C . . . A . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . A . . . C . . . . . . . . . . . C . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . G . . . C . . . . . . . . . . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . A . . . C . . . . . . . . . . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . A . . . C . . . . . . . . . . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . A . . . C . . . . . . . . . . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . A . . . C . . . . . . . . . . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . A . . . C . . . . . . . . . . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqCons :
originalCons : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
finalCons : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
Alignments
lowQualScore : 2 2 2 2 2 2 2 5 2 5 7777 2 2 2 2 66666 5555 666 2 66 2 2 2 777 777 2 33 2 0 2 2 2 2 55 2 33 3333 2 33 5555 7 2 2 444 444 2
lowQualScore : . . . . . . . . . . .... . . . . ..... .... ... . .. . . . ... ... . .. . . . . . . .. . .. .... . .. .... . . . ... ... .
lowQualScore : 5 5 5 5 5 5 5 0 5 0 8888 5 5 5 5 22222 3333 999 5 77 5 5 7 000 333 7 77 7 8 5 5 5 5 99 5 44 8888 5 44 3333 5 7 7 777 777 7
consensus : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
Reference ( family-836 ) : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100772 : ACCCATTTTTTCAG-G-AGTT-TGCAAAAGTG-TCG-AAA-AGT-TA-AAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---AAC-GG-AAAG-ATTGATATTTTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AC--C-GG-TTG--GCAA----T-A-CAC-TCATTG---TAAC---CCGAA-TAAT
gi|100773 : ACACATTTTTTCAG-G-AGTT-TGCAAA-GTG-TCG-AAA-AGT-TA-AAA-TT-TG----AAAACT-TTT-GG-TATGA--T-----TCC----TT---AAC-GG---AG-ATTGAAT-TTTATAAG-GG---C---GGT-AAGTAC--G-AATTTTCCA-GGAT--AT-A-CAC--AAGTG-T--AC--C-GG-TTG--GCAA----T-A-CAC-TC-TTG---TAA----CCGAA-TAAT
gi|100774 : ACACATTTTTTCAG-G-AGTT-TGCAAA-GTG-TCG-AAA-AGT-TA-AAA-TT-TG----AAAACT-TTT-GG-TATGA--T-----TCC----TT---AAC-GG---AG-ATTGAAT-TTTATAAG-GG---C---GGT-AAGTAC--G-AATTTTCCA-GGAT--AT-A-CAC--AAGTG-T--AC--C-GG-TTG--GCAA----T-A-CAC-TC-TTG---TAA----CCGAA-TAAT
gi|100775 : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-A-T-TA-AAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---AGT-AAGTAC--A-AATTTTTCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GTAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100776 : ACCCATTTTTTCGG-G-GTTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----CCC----TTTATACC-GG-AAAG-ATCCATA-TCTATAAG-GGC--T---GGT-AAGTAC--G-AATTTTTCA-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100777 : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTA-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG--AAT-ATCGATA-TTTATAAG-GGCTGC---GGT-AAGTAC--G-AATTTTCCA-GGATC-AT-A-CAC--AAGTG-T--AT--G-GG-CCG--GCAT----T-A-CTC-TCAGTG---TAAC---CCGAA-TAAT
gi|100778 : CCATTTTTTCCG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---ACC-GG-AAAG-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--A-AATTTT-CA-GGAT--AT-GCCAC--AATTG-T--AC--G-GG-CTG--GTAT----T-A-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100779 : acaACCCATTTCTTCAG-G-ATTT-TGCAAAAGTG-TCG--AA-AAT-TT-GAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TA---AC---G-GAAG-ATCGATA-TCTACAAG-GG---C---GGT-ATGTAC--GCAATTTTTCA-GGATC-AT-A-CAC--ATGTG-T--AC--G-GGCCCG--GTAT----TAA-CAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100780 : TTTTTTCAA-G-AATT-TGCAAAGGT---CG-AAA-AAT-CAAGAA-TT-TG----AAAACT-TTT-GG-TATGAT-T-----TCC----TT---A-T-GG-AAAG-ATCAATA-TATATAAG-GG---C---GGT-AATTAC--G-AATTTTC---AGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CT---GCATTAAAT-A-CAC-TCAGTG---T-AC---CCGAA-TAAT
gi|100781 : acaccACCCATTTTTTCAG-G-ATTG-GGCAAAAGTGCTCA-AAA-AAT-TA-GCA-TT-TGAAAAAAAAC--TTT-GG-TATGAT-TTTTTCTCC----TTC--ACT-GG--AAG-ATCGATA-TTTATAAGCGGC--T---TGTAAAGTAT--G-GAATTTCCA-GGATC-A--A-CAC--AAGTG-TAAAC--GAGA-CCG--GCAT----TCA-CAC-TCAGTG---TAACCCACCGAATTAAT
gi|100782 : ACCCATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TA-GAA-TT-TG----AAAACT-TTT-GG-TATGAC-T-----TTC----TT---ACC-GG-AAAG-ATCGATA-TCTATAA
gi|100783 : CATTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AA--TA-GAA-TT-TG----AAAACT-TTTAAA-TATGAT-T-----TCC----AT---ACC-AGCAAAG-ATCGATA-TTT-TAAG-GGC--C---GTT-AAGTAC--G-AATTTCCGA-AGATC-AT-A-CACA-AAGTG-T--AC--G-GG-CCG--GC-T----A-A-TAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100784 : TTTTTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAAGAATGTA-AAA-TTCTGA---AAAACTGTTT-GG-TATGAT-T-----TCC----TT---ACCGGG-AAAG-ATCGATA-TCTATAAG-GGC--CTCAGCT-AAGTATCGG-AAATTTTCA-GG-TC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GTAT----T-CTCAC-TCAGTG---TAAC---CCGAA-TAAT
gi|100785 : TTTTTTCAGCGCATTTATGCAAAAGTG-TCGCAAA-AAT-CT-TAA-TTGTG----AAAACT-T---GGCTATGAT-T-----TCCACACTT---ACC-AG-AAAGTATCGATA-TCTATAAG-GGC--CG--GGT-ACGTAC--G-AATTTTTCA-GGATCAATAA-CAC--AAGTGTT--AC--G-GG-CCGGAGTAT----T-A-AAC-CCAGTGTGTTAAC---CT-AA-TAA
gi|100786 : TTGTTCAG-G-ATTT-TGCAAAAGTG-TCG-AAA-AAT-TAAGAAGTT-TG----AAAACT-TTT-GG-TGTGATGT-----TCC----TT---ACC-AG-AAAA-ATCGATA-TCTATAAG-GGC--C---GGT-AAGTAC--G-AATTTTTCAGGGATC-AT-A-CAC--AAATG-T--ACGGG-GG-CCG--GCAT----TAA-CACTTCAGTG---TAAC---CCGAG-
gi|100787 : TTTTTCAA-G-ATTT--GCAAAAGTG-TCG-AAA-AAT-TC-GA--TT-TG----AAAACT-TT---G-TATGAT-T-----TCC----TT---AC--GG-AAAG-ATCGATA-TCTATA-G-GGC--C---G-T-AAGTAC--G-A-TTTTTCA-GGATC-AT-A-CACTAAAGTG----AC----GG-CCG--GCAT----T-A-CAC-TCAGTG---TAAC---CCAGA-TAAT
gi|100788 : A-GGATC-AT-A-CAC--AAGTG-T--AC--G-GG-CCG--GCAT----T-