lowQualScore : 2222222
lowQualScore : 2 0 2 33 2 2 33 3 5 2 2 66 2 2 8888 5 2 33 2 2 2 0 2 5 33 2 5555555 6 44 3 3 3
lowQualScore : . . . .. . . .. . . . . .. . . .... . . .. . . . . . . .. . ....... . .. . . .
lowQualScore : 9 1 9 99 9 9 99 3 7 9 9 00 7 7 3333 3 7 77 7 7 7 5 7 3 77 9 0000000 7 66 3 6 6
consensus : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
Reference ( gi|11961 ) : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11962 : AAACAAAACCAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-GCG-AAT
gi|11958 : AAACAAAACAAAAATA-GAGGGA-CATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-CGT-GCAA-ATGT----AACAATGAA-GTCAGAT-ACG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11959 : AAACAAAAACAAAATA-GAGGGA-CATAC---A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-CGT-GCAA-ATGT----AACAATGAA-GTCAGAT-ACG--AA-A-TC-ACAACTGAAATCA-CT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11963 : AAACGAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTAGACGT-T--CGACACGTCCT-ATA-C-CAGGT-TGT-GCAA-ATGT----AA-----------------CG--AA-A-TC-ACGACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11964 : AAACAAA-CAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CAAC-TGTCCTGATA-C-CAGGT-CGT-GCTA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAAATGAAAT-AGCT-TCTAC-AAATAT-TATA--------AT-A--GGGC-TGAAG-ACG-AAT
gi|11965 : AAACAAAACAAACATG-GAGG-A-AATACT--A-AAGAAATACTC-T-T--C-ACAAGTCAT-ATA-C-CAGGT-AGT-GTAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--GT-TATAT-------GCAA--GGGC-TCAAA-ACG-AAT
gi|11966 : AAACAAAACTAAAATA-GAAGGG-AATACT--A-AAGAAGTACACGT-TGACCACAAGTCCTAATACC-CAGGT-AGTGGCAA-ATGTA---AACAATGAACGTCAGAT-GCGAAAA-A-TCAACAACTGAAATCAGCTCCTTACAAA--AT-TATATA------AT-A--GGGC-TGAAG-ACT-AAT
gi|11960 : AAACAAA-CAAAAATAAGAGGGACAATACT--ACAAGAAGTCAACGT-T--CGA-AAGTCCT-ATA-T-CCGGT-CGT-GCAAGATGT----AACAAT-AA-GTCAGAT-ACG--AAGA-TC-ACAACTGAAAT-AGCT-CTTACAAA--AT-TATAT-------ATAA--GGGCTTGAAGAACG-GAT
gi|11967 : AAACAAAAGAAAAATA-GAGGGA-A-TAAT--A-CAGAAGTACACGT-T--CGACAA-TCCT-ATA-C-CAGAT-AGT-GCAA-ATGT----AACAATGAAAGTCAGAT-G--------------------AA--AGCT-CTTAC-AA--AT-TAT-T-------AT-A---GGC-TGAAC-ACG-AAT
gi|11968 : AAACAAAACAAAAATA-GAGGGA-AA-------------GTACA-----------------T-ACA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAGAGCG--AA-AGTC-ACAACTGAAATCAGCT-C-TA--AA--ATATATAT-------AT-AATGGGC-TGACG-ACG-AAT
gi|11969 : AAACAAAACAAAAA-----------ATATT--A-ATGAAGTACGCCT-C--TGTCAAATA---ATA-C-C------GT-GTAA-ATGG----AACTGTGAA-GTCAGAT-GTG--AG-A-TC-ACATCTGAAATCAAAA-CTGAC-AA--AT-CATATGGTGTAAAT-A--GGGC-TTAAG-ATGTAAT
gi|11970 : AAACAAAACAAAAATA-GAGGAA-AATACT--A-AAGAAGTACACAT-T--CGACAAGTCC
gi|11971 : AAACAAAGCAAAAATA---------ACA-------------ACATGTCT--TGG-ATGTCCT-ACA----------GT-GTAA-ATGTCCTTAACAATGAT-GTTAGAT-GTG--AT-A-TT-ACATCTGAAATCAGCT-GTTAC-AA--AT-CAT
gi|11972 : AACAAAAA----AG----AATGCTTGG-AAGGGGAACATGT-C--TAACAAATC---ATA-CACATATCAGT-GTAA--TGA----AACAATGAA-GTCAGAT-ATG--AA-A-TC-ACAGCTGA----AGCT-CTTAC-AA--AT-CA
gi|11973 : AAATC---ATA-C-CAAG--A-----AA-ATGG----AACTACGAA-GTCAGAT-ATG--AA-G-TC-AGATGTGAAGTCACAT-CTGAC-AA--AA-CATATCGTGTAAAT-A--GGGC-T
gi|11974 : cgtctgtcaagtcagatggctttactGT-GTAA-ATGG----AACTATGAA-GTCAAAT-ATG--AA-G-TC-ACATCTGAAGTCAGAT-CTGAC-AA--A
Alignments
lowQualScore : 2222222
lowQualScore : 2 2 33 2 2 33 2 5 2 2 55 2 2 7777 5 2 33 2 2 2 2 5 33 2 3333333 6 44 3 3 3
lowQualScore : . . .. . . .. . . . . .. . . .... . . .. . . . . . .. . ....... . .. . . .
lowQualScore : 7 7 77 7 7 77 5 3 7 7 00 5 5 8888 0 5 44 5 5 5 5 0 44 7 1111111 2 22 1 3 3
consensus : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
Reference ( family-828 ) : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11958 : AAACAAAACAAAAATA-GAGGGA-CATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-CGT-GCAA-ATGT----AACAATGAA-GTCAGAT-ACG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11959 : AAACAAAAACAAAATA-GAGGGA-CATAC---A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-CGT-GCAA-ATGT----AACAATGAA-GTCAGAT-ACG--AA-A-TC-ACAACTGAAATCA-CT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11960 : AAACAAA-CAAAAATAAGAGGGACAATACT--ACAAGAAGTCAACGT-T--CGA-AAGTCCT-ATA-T-CCGGT-CGT-GCAAGATGT----AACAAT-AA-GTCAGAT-ACG--AAGA-TC-ACAACTGAAAT-AGCT-CTTACAAA--AT-TATAT-------ATAA--GGGCTTGAAGAACG-GAT
gi|11961 : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11962 : AAACAAAACCAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-GCG-AAT
gi|11963 : AAACGAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTAGACGT-T--CGACACGTCCT-ATA-C-CAGGT-TGT-GCAA-ATGT----AA-----------------CG--AA-A-TC-ACGACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11964 : AAACAAA-CAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CAAC-TGTCCTGATA-C-CAGGT-CGT-GCTA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAAATGAAAT-AGCT-TCTAC-AAATAT-TATA--------AT-A--GGGC-TGAAG-ACG-AAT
gi|11965 : AAACAAAACAAACATG-GAGG-A-AATACT--A-AAGAAATACTC-T-T--C-ACAAGTCAT-ATA-C-CAGGT-AGT-GTAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--GT-TATAT-------GCAA--GGGC-TCAAA-ACG-AAT
gi|11966 : AAACAAAACTAAAATA-GAAGGG-AATACT--A-AAGAAGTACACGT-TGACCACAAGTCCTAATACC-CAGGT-AGTGGCAA-ATGTA---AACAATGAACGTCAGAT-GCGAAAA-A-TCAACAACTGAAATCAGCTCCTTACAAA--AT-TATATA------AT-A--GGGC-TGAAG-ACT-AAT
gi|11967 : AAACAAAAGAAAAATA-GAGGGA-A-TAAT--A-CAGAAGTACACGT-T--CGACAA-TCCT-ATA-C-CAGAT-AGT-GCAA-ATGT----AACAATGAAAGTCAGAT-G--------------------AA--AGCT-CTTAC-AA--AT-TAT-T-------AT-A---GGC-TGAAC-ACG-AAT
gi|11968 : AAACAAAACAAAAATA-GAGGGA-AA-------------GTACA-----------------T-ACA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAGAGCG--AA-AGTC-ACAACTGAAATCAGCT-C-TA--AA--ATATATAT-------AT-AATGGGC-TGACG-ACG-AAT
gi|11969 : AAACAAAACAAAAA-----------ATATT--A-ATGAAGTACGCCT-C--TGTCAAATA---ATA-C-C------GT-GTAA-ATGG----AACTGTGAA-GTCAGAT-GTG--AG-A-TC-ACATCTGAAATCAAAA-CTGAC-AA--AT-CATATGGTGTAAAT-A--GGGC-TTAAG-ATGTAAT
gi|11970 : AAACAAAACAAAAATA-GAGGAA-AATACT--A-AAGAAGTACACAT-T--CGACAAGTCC
gi|11971 : AAACAAAGCAAAAATA---------ACA-------------ACATGTCT--TGG-ATGTCCT-ACA----------GT-GTAA-ATGTCCTTAACAATGAT-GTTAGAT-GTG--AT-A-TT-ACATCTGAAATCAGCT-GTTAC-AA--AT-CAT
gi|11972 : AACAAAAA----AG----AATGCTTGG-AAGGGGAACATGT-C--TAACAAATC---ATA-CACATATCAGT-GTAA--TGA----AACAATGAA-GTCAGAT-ATG--AA-A-TC-ACAGCTGA----AGCT-CTTAC-AA--AT-CA
gi|11973 : AAATC---ATA-C-CAAG--A-----AA-ATGG----AACTACGAA-GTCAGAT-ATG--AA-G-TC-AGATGTGAAGTCACAT-CTGAC-AA--AA-CATATCGTGTAAAT-A--GGGC-T
gi|11974 : cgtctgtcaagtcagatggctttactGT-GTAA-ATGG----AACTATGAA-GTCAAAT-ATG--AA-G-TC-ACATCTGAAGTCAGAT-CTGAC-AA--A
Alignments
lowQualScore : 2222222
lowQualScore : 2 2 33 2 2 33 2 5 2 2 55 2 2 7777 5 2 33 2 2 2 2 5 33 2 3333333 6 44 3 3 3
lowQualScore : . . .. . . .. . . . . .. . . .... . . .. . . . . . .. . ....... . .. . . .
lowQualScore : 7 7 77 7 7 77 5 3 7 7 00 5 5 8888 0 5 44 5 5 5 5 0 44 7 1111111 2 22 1 3 3
consensus : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
Reference ( family-828 ) : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11958 : AAACAAAACAAAAATA-GAGGGA-CATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-CGT-GCAA-ATGT----AACAATGAA-GTCAGAT-ACG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11959 : AAACAAAAACAAAATA-GAGGGA-CATAC---A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-CGT-GCAA-ATGT----AACAATGAA-GTCAGAT-ACG--AA-A-TC-ACAACTGAAATCA-CT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11960 : AAACAAA-CAAAAATAAGAGGGACAATACT--ACAAGAAGTCAACGT-T--CGA-AAGTCCT-ATA-T-CCGGT-CGT-GCAAGATGT----AACAAT-AA-GTCAGAT-ACG--AAGA-TC-ACAACTGAAAT-AGCT-CTTACAAA--AT-TATAT-------ATAA--GGGCTTGAAGAACG-GAT
gi|11961 : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11962 : AAACAAAACCAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-GCG-AAT
gi|11963 : AAACGAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTAGACGT-T--CGACACGTCCT-ATA-C-CAGGT-TGT-GCAA-ATGT----AA-----------------CG--AA-A-TC-ACGACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11964 : AAACAAA-CAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CAAC-TGTCCTGATA-C-CAGGT-CGT-GCTA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAAATGAAAT-AGCT-TCTAC-AAATAT-TATA--------AT-A--GGGC-TGAAG-ACG-AAT
gi|11965 : AAACAAAACAAACATG-GAGG-A-AATACT--A-AAGAAATACTC-T-T--C-ACAAGTCAT-ATA-C-CAGGT-AGT-GTAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--GT-TATAT-------GCAA--GGGC-TCAAA-ACG-AAT
gi|11966 : AAACAAAACTAAAATA-GAAGGG-AATACT--A-AAGAAGTACACGT-TGACCACAAGTCCTAATACC-CAGGT-AGTGGCAA-ATGTA---AACAATGAACGTCAGAT-GCGAAAA-A-TCAACAACTGAAATCAGCTCCTTACAAA--AT-TATATA------AT-A--GGGC-TGAAG-ACT-AAT
gi|11967 : AAACAAAAGAAAAATA-GAGGGA-A-TAAT--A-CAGAAGTACACGT-T--CGACAA-TCCT-ATA-C-CAGAT-AGT-GCAA-ATGT----AACAATGAAAGTCAGAT-G--------------------AA--AGCT-CTTAC-AA--AT-TAT-T-------AT-A---GGC-TGAAC-ACG-AAT
gi|11968 : AAACAAAACAAAAATA-GAGGGA-AA-------------GTACA-----------------T-ACA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAGAGCG--AA-AGTC-ACAACTGAAATCAGCT-C-TA--AA--ATATATAT-------AT-AATGGGC-TGACG-ACG-AAT
gi|11969 : AAACAAAACAAAAA-----------ATATT--A-ATGAAGTACGCCT-C--TGTCAAATA---ATA-C-C------GT-GTAA-ATGG----AACTGTGAA-GTCAGAT-GTG--AG-A-TC-ACATCTGAAATCAAAA-CTGAC-AA--AT-CATATGGTGTAAAT-A--GGGC-TTAAG-ATGTAAT
gi|11970 : AAACAAAACAAAAATA-GAGGAA-AATACT--A-AAGAAGTACACAT-T--CGACAAGTCC
gi|11971 : AAACAAAGCAAAAATA---------ACA-------------ACATGTCT--TGG-ATGTCCT-ACA----------GT-GTAA-ATGTCCTTAACAATGAT-GTTAGAT-GTG--AT-A-TT-ACATCTGAAATCAGCT-GTTAC-AA--AT-CAT
gi|11972 : AACAAAAA----AG----AATGCTTGG-AAGGGGAACATGT-C--TAACAAATC---ATA-CACATATCAGT-GTAA--TGA----AACAATGAA-GTCAGAT-ATG--AA-A-TC-ACAGCTGA----AGCT-CTTAC-AA--AT-CA
gi|11973 : AAATC---ATA-C-CAAG--A-----AA-ATGG----AACTACGAA-GTCAGAT-ATG--AA-G-TC-AGATGTGAAGTCACAT-CTGAC-AA--AA-CATATCGTGTAAAT-A--GGGC-T
gi|11974 : cgtctgtcaagtcagatggctttactGT-GTAA-ATGG----AACTATGAA-GTCAAAT-ATG--AA-G-TC-ACATCTGAAGTCAGAT-CTGAC-AA--A
blockSeqs : A C TG C C GA C G C A CA G G CCTT C A AA G G A C A AT A GGTGTAA A AT T A T
blockSeqs : . . . . . . C A . . C . . A A . . . . . . A . . CGTGTAA A . . . .
blockSeqs : . . . . . . C . . . C . . . . . . . . . . . . . A . . . . .
blockSeqs : . . . . . . C . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . C . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . C . . . T . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . A . . . C . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . C . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . C . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . C . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . C . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . A . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . .
blockSeqCons :
originalCons : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
finalCons : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
Alignments
lowQualScore : 2222222
lowQualScore : 2 2 33 2 2 33 2 5 2 2 55 2 2 7777 5 2 33 2 2 2 2 5 33 2 3333333 6 44 3 3 3
lowQualScore : . . .. . . .. . . . . .. . . .... . . .. . . . . . .. . ....... . .. . . .
lowQualScore : 7 7 77 7 7 77 5 3 7 7 00 5 5 8888 0 5 44 5 5 5 5 0 44 7 1111111 2 22 1 3 3
consensus : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
Reference ( family-828 ) : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11958 : AAACAAAACAAAAATA-GAGGGA-CATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-CGT-GCAA-ATGT----AACAATGAA-GTCAGAT-ACG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11959 : AAACAAAAACAAAATA-GAGGGA-CATAC---A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-CGT-GCAA-ATGT----AACAATGAA-GTCAGAT-ACG--AA-A-TC-ACAACTGAAATCA-CT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11960 : AAACAAA-CAAAAATAAGAGGGACAATACT--ACAAGAAGTCAACGT-T--CGA-AAGTCCT-ATA-T-CCGGT-CGT-GCAAGATGT----AACAAT-AA-GTCAGAT-ACG--AAGA-TC-ACAACTGAAAT-AGCT-CTTACAAA--AT-TATAT-------ATAA--GGGCTTGAAGAACG-GAT
gi|11961 : AAACAAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11962 : AAACAAAACCAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CGACAAGTCCT-ATA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-GCG-AAT
gi|11963 : AAACGAAACAAAAATA-GAGGGA-AATACT--A-AAGAAGTAGACGT-T--CGACACGTCCT-ATA-C-CAGGT-TGT-GCAA-ATGT----AA-----------------CG--AA-A-TC-ACGACTGAAATCAGCT-CTTAC-AA--AT-TATAT-------AT-A--GGGC-TGAAG-ACG-AAT
gi|11964 : AAACAAA-CAAAAATA-GAGGGA-AATACT--A-AAGAAGTACACGT-T--CAAC-TGTCCTGATA-C-CAGGT-CGT-GCTA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAAATGAAAT-AGCT-TCTAC-AAATAT-TATA--------AT-A--GGGC-TGAAG-ACG-AAT
gi|11965 : AAACAAAACAAACATG-GAGG-A-AATACT--A-AAGAAATACTC-T-T--C-ACAAGTCAT-ATA-C-CAGGT-AGT-GTAA-ATGT----AACAATGAA-GTCAGAT-GCG--AA-A-TC-ACAACTGAAATCAGCT-CTTAC-AA--GT-TATAT-------GCAA--GGGC-TCAAA-ACG-AAT
gi|11966 : AAACAAAACTAAAATA-GAAGGG-AATACT--A-AAGAAGTACACGT-TGACCACAAGTCCTAATACC-CAGGT-AGTGGCAA-ATGTA---AACAATGAACGTCAGAT-GCGAAAA-A-TCAACAACTGAAATCAGCTCCTTACAAA--AT-TATATA------AT-A--GGGC-TGAAG-ACT-AAT
gi|11967 : AAACAAAAGAAAAATA-GAGGGA-A-TAAT--A-CAGAAGTACACGT-T--CGACAA-TCCT-ATA-C-CAGAT-AGT-GCAA-ATGT----AACAATGAAAGTCAGAT-G--------------------AA--AGCT-CTTAC-AA--AT-TAT-T-------AT-A---GGC-TGAAC-ACG-AAT
gi|11968 : AAACAAAACAAAAATA-GAGGGA-AA-------------GTACA-----------------T-ACA-C-CAGGT-AGT-GCAA-ATGT----AACAATGAA-GTCAGAGAGCG--AA-AGTC-ACAACTGAAATCAGCT-C-TA--AA--ATATATAT-------AT-AATGGGC-TGACG-ACG-AAT
gi|11969 : AAACAAAACAAAAA-----------ATATT--A-ATGAAGTACGCCT-C--TGTCAAATA---ATA-C-C------GT-GTAA-ATGG----AACTGTGAA-GTCAGAT-GTG--AG-A-TC-ACATCTGAAATCAAAA-CTGAC-AA--AT-CATATGGTGTAAAT-A--GGGC-TTAAG-ATGTAAT
gi|11970 : AAACAAAACAAAAATA-GAGGAA-AATACT--A-AAGAAGTACACAT-T--CGACAAGTCC
gi|11971 : AAACAAAGCAAAAATA---------ACA-------------ACATGTCT--TGG-ATGTCCT-ACA----------GT-GTAA-ATGTCCTTAACAATGAT-GTTAGAT-GTG--AT-A-TT-ACATCTGAAATCAGCT-GTTAC-AA--AT-CAT
gi|11972 : AACAAAAA----AG----AATGCTTGG-AAGGGGAACATGT-C--TAACAAATC---ATA-CACATATCAGT-GTAA--TGA----AACAATGAA-GTCAGAT-ATG--AA-A-TC-ACAGCTGA----AGCT-CTTAC-AA--AT-CA
gi|11973 : AAATC---ATA-C-CAAG--A-----AA-ATGG----AACTACGAA-GTCAGAT-ATG--AA-G-TC-AGATGTGAAGTCACAT-CTGAC-AA--AA-CATATCGTGTAAAT-A--GGGC-T
gi|11974 : cgtctgtcaagtcagatggctttactGT-GTAA-ATGG----AACTATGAA-GTCAAAT-ATG--AA-G-TC-ACATCTGAAGTCAGAT-CTGAC-AA--A