lowQualScore : 3 2 2 2 33 5 2 2 2 2 2 33
lowQualScore : . . . . .. . . . . . . ..
lowQualScore : 1 5 5 5 44 0 5 5 5 6 5 99
consensus : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
Reference ( gi|88497 ) : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCACCCATT-TACT--AGATAT
gi|88499 : TTCA-AAA-T-GATACT-ATG--A-TTA-C-AAAAATCC-CACCACCCATT-CACT--AGATAT
gi|88498 : TTCA-AAA-T-GATACT-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
gi|88500 : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACGACCCATT-TACT--AGATA
gi|88501 : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAACCC-CACCATCCGTT-TAAT--AGATAT
gi|88502 : TTAA-AAA-T-GGCACC-ATG--A-TTA-C-AAAA-TCC-CACCATCCATT-TACT--AGATAT
gi|88503 : TTCA-AAA-T-CATACC-ATG--A-TTA-CAAAAAATCC-CAACATCCATT-GACT--AGATAT
gi|88504 : TTCA-AAA-T-GATACA-ATG--A-TTG-C-AAAAATCC-CACCATCCATT-TA
gi|88507 : TTCA-AAA---AATACC-ATG--ACTTA-C-AAAAATCCGCACCACCCATTGTACT--AGATA
gi|88505 : TTCA-AAAAT-GATACC-ATG--G-TTA-C-AAAAATTC-CACCATCCATT-GACC--TGATAT
gi|88508 : TTCATAAA-T-GATACCCATG--AATTAGC-ACAAATCC-CACCACCCATT-TACT--AGAT
gi|88506 : TTCA-AAA-TTGATACC-ATG--A-TTA-C-AAAAATTC-CACCATTCATT-TCCT--
gi|88509 : TTCA-AAA-T-GATACC-GTGATA-TTA-C-AAAAATCC-CA-CATCCATT-TA
gi|88510 : -AAA-T-GATACC-TTG--A-TTA-C-AAAAATCC-CACCAACCATT-AGCT--AGATAT
gi|88511 : AA-T-GAATCC-ATG--A-TTA-T-AAAATTCC-CACCATCCATT-TACT--AGAT
gi|88512 : A-T-GATGAT-ATG--A-TTA-C-AAAAATCT-CACCATCCATT-TCCT--AGATAT
gi|88513 : -T-GATACC-ATG--A-TTA-C-AAAAATCT-CACCATCCATG-TACTGCAGATA
Alignments
lowQualScore : 2 2 2 2 33 4 2 2 2 2 33
lowQualScore : . . . . .. . . . . . ..
lowQualScore : 9 4 4 4 22 7 4 4 4 4 77
consensus : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
Reference ( family-826 ) : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
gi|88497 : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCACCCATT-TACT--AGATAT
gi|88498 : TTCA-AAA-T-GATACT-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
gi|88499 : TTCA-AAA-T-GATACT-ATG--A-TTA-C-AAAAATCC-CACCACCCATT-CACT--AGATAT
gi|88500 : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACGACCCATT-TACT--AGATA
gi|88501 : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAACCC-CACCATCCGTT-TAAT--AGATAT
gi|88502 : TTAA-AAA-T-GGCACC-ATG--A-TTA-C-AAAA-TCC-CACCATCCATT-TACT--AGATAT
gi|88503 : TTCA-AAA-T-CATACC-ATG--A-TTA-CAAAAAATCC-CAACATCCATT-GACT--AGATAT
gi|88504 : TTCA-AAA-T-GATACA-ATG--A-TTG-C-AAAAATCC-CACCATCCATT-TA
gi|88505 : TTCA-AAAAT-GATACC-ATG--G-TTA-C-AAAAATTC-CACCATCCATT-GACC--TGATAT
gi|88506 : TTCA-AAA-TTGATACC-ATG--A-TTA-C-AAAAATTC-CACCATTCATT-TCCT--
gi|88507 : TTCA-AAA---AATACC-ATG--ACTTA-C-AAAAATCCGCACCACCCATTGTACT--AGATA
gi|88508 : TTCATAAA-T-GATACCCATG--AATTAGC-ACAAATCC-CACCACCCATT-TACT--AGAT
gi|88509 : TTCA-AAA-T-GATACC-GTGATA-TTA-C-AAAAATCC-CA-CATCCATT-TA
gi|88510 : -AAA-T-GATACC-TTG--A-TTA-C-AAAAATCC-CACCAACCATT-AGCT--AGATAT
gi|88511 : AA-T-GAATCC-ATG--A-TTA-T-AAAATTCC-CACCATCCATT-TACT--AGAT
gi|88512 : A-T-GATGAT-ATG--A-TTA-C-AAAAATCT-CACCATCCATT-TCCT--AGATAT
gi|88513 : -T-GATACC-ATG--A-TTA-C-AAAAATCT-CACCATCCATG-TACTGCAGATA
Alignments
lowQualScore : 2 2 2 2 33 4 2 2 2 2 33
lowQualScore : . . . . .. . . . . . ..
lowQualScore : 9 4 4 4 22 7 4 4 4 4 77
consensus : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
Reference ( family-826 ) : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
gi|88497 : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCACCCATT-TACT--AGATAT
gi|88498 : TTCA-AAA-T-GATACT-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
gi|88499 : TTCA-AAA-T-GATACT-ATG--A-TTA-C-AAAAATCC-CACCACCCATT-CACT--AGATAT
gi|88500 : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACGACCCATT-TACT--AGATA
gi|88501 : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAACCC-CACCATCCGTT-TAAT--AGATAT
gi|88502 : TTAA-AAA-T-GGCACC-ATG--A-TTA-C-AAAA-TCC-CACCATCCATT-TACT--AGATAT
gi|88503 : TTCA-AAA-T-CATACC-ATG--A-TTA-CAAAAAATCC-CAACATCCATT-GACT--AGATAT
gi|88504 : TTCA-AAA-T-GATACA-ATG--A-TTG-C-AAAAATCC-CACCATCCATT-TA
gi|88505 : TTCA-AAAAT-GATACC-ATG--G-TTA-C-AAAAATTC-CACCATCCATT-GACC--TGATAT
gi|88506 : TTCA-AAA-TTGATACC-ATG--A-TTA-C-AAAAATTC-CACCATTCATT-TCCT--
gi|88507 : TTCA-AAA---AATACC-ATG--ACTTA-C-AAAAATCCGCACCACCCATTGTACT--AGATA
gi|88508 : TTCATAAA-T-GATACCCATG--AATTAGC-ACAAATCC-CACCACCCATT-TACT--AGAT
gi|88509 : TTCA-AAA-T-GATACC-GTGATA-TTA-C-AAAAATCC-CA-CATCCATT-TA
gi|88510 : -AAA-T-GATACC-TTG--A-TTA-C-AAAAATCC-CACCAACCATT-AGCT--AGATAT
gi|88511 : AA-T-GAATCC-ATG--A-TTA-T-AAAATTCC-CACCATCCATT-TACT--AGAT
gi|88512 : A-T-GATGAT-ATG--A-TTA-C-AAAAATCT-CACCATCCATT-TCCT--AGATAT
gi|88513 : -T-GATACC-ATG--A-TTA-C-AAAAATCT-CACCATCCATG-TACTGCAGATA
blockSeqs : T A T C AT C G A G G GC
blockSeqs : . . . . . A . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . .
blockSeqs : . . . . . . . . .
blockSeqs : . . . . . . . . .
blockSeqCons :
originalCons : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
finalCons : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
Alignments
lowQualScore : 2 2 2 2 33 4 2 2 2 2 33
lowQualScore : . . . . .. . . . . . ..
lowQualScore : 9 4 4 4 22 7 4 4 4 4 77
consensus : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
Reference ( family-826 ) : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
gi|88497 : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACCACCCATT-TACT--AGATAT
gi|88498 : TTCA-AAA-T-GATACT-ATG--A-TTA-C-AAAAATCC-CACCATCCATT-TACT--AGATAT
gi|88499 : TTCA-AAA-T-GATACT-ATG--A-TTA-C-AAAAATCC-CACCACCCATT-CACT--AGATAT
gi|88500 : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAATCC-CACGACCCATT-TACT--AGATA
gi|88501 : TTCA-AAA-T-GATACC-ATG--A-TTA-C-AAAAACCC-CACCATCCGTT-TAAT--AGATAT
gi|88502 : TTAA-AAA-T-GGCACC-ATG--A-TTA-C-AAAA-TCC-CACCATCCATT-TACT--AGATAT
gi|88503 : TTCA-AAA-T-CATACC-ATG--A-TTA-CAAAAAATCC-CAACATCCATT-GACT--AGATAT
gi|88504 : TTCA-AAA-T-GATACA-ATG--A-TTG-C-AAAAATCC-CACCATCCATT-TA
gi|88505 : TTCA-AAAAT-GATACC-ATG--G-TTA-C-AAAAATTC-CACCATCCATT-GACC--TGATAT
gi|88506 : TTCA-AAA-TTGATACC-ATG--A-TTA-C-AAAAATTC-CACCATTCATT-TCCT--
gi|88507 : TTCA-AAA---AATACC-ATG--ACTTA-C-AAAAATCCGCACCACCCATTGTACT--AGATA
gi|88508 : TTCATAAA-T-GATACCCATG--AATTAGC-ACAAATCC-CACCACCCATT-TACT--AGAT
gi|88509 : TTCA-AAA-T-GATACC-GTGATA-TTA-C-AAAAATCC-CA-CATCCATT-TA
gi|88510 : -AAA-T-GATACC-TTG--A-TTA-C-AAAAATCC-CACCAACCATT-AGCT--AGATAT
gi|88511 : AA-T-GAATCC-ATG--A-TTA-T-AAAATTCC-CACCATCCATT-TACT--AGAT
gi|88512 : A-T-GATGAT-ATG--A-TTA-C-AAAAATCT-CACCATCCATT-TCCT--AGATAT
gi|88513 : -T-GATACC-ATG--A-TTA-C-AAAAATCT-CACCATCCATG-TACTGCAGATA