lowQualScore : 11 2222222222 111111
lowQualScore : 88 5 6666666666 0 777 44 4 88 55 5555 4 2 2 444444 555 2 1 7
lowQualScore : .. . .......... . ... .. . .. .. .... . . . ...... ... . . .
lowQualScore : 33 6 1111111111 3 444 22 0 11 99 3333 1 7 7 222222 000 9 2 1
consensus : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TNCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCC----CCAGTCCCAA-T-CC--N---AAAT---T-TCCTAATATTTTCCCA
Reference ( gi|33353 ) : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCC----CCAGTCCCAA-T-CC--T---AAAT---T-TCCTAATATTTTCCCA
gi|33355 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCC----CCAGTCCCAA-T-CC--T---AAAT---T-TCCTAATATTTTCCCA
gi|33354 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCC----CCAGTCCCAA-T-CC--T---AAAT---T-TCCTAATATTTTCCCA
gi|33356 : AACGAAATTAAAGTGGATGCGAATTTT--CTTAAGTTGAATAACTTGTATACAGTGATTTTTCA--AGG--CCCAATTTGGGT-CTG--AATTTCGGCC----CT--TTCCCC-T-CCCAT---AAAT---TGTC--AATTTTTTCCCA
gi|33357 : TTTTCTCCAGAGTCTAAC--------TGCAGTGTTTTTTTT--AGG--CCCGATTTGGGG-CCG--ATATTCGGCC----CCAG
gi|33358 : TATTTTAAAACTGAT----------CAGTGTTTTTTTT--GGGGCCCTGTTTTGGGG-C-G--ATATTC-GCC----CCAGTCCCAA-T-CC--TTAAAAAT---T-TCCTAATTTTTTCCCA
gi|33360 : GTTTGAT--------CTCAGTGATTTTTTTAAGGG--CC--ATTTTGGGTCCG--AATTTCGGCC----CT-TTCCCCT-C-CC--A---AAAA---T-TGCTAATTTTTTCCCA
gi|33361 : T--------TTCAGTGGTTTTTTT--GGG--CC-GATTTGGG--CCG--ATATTCGGCC----CCAGT-CCAA-T--A--T---AAAT---T---CTAATATTTTCCCA
gi|33362 : CAGTGTTTTTT----GGG--CGCCATTTGGG--CCG--ATATTCGGCC----CCAG--CCAA-T-CC--T---AAAT---T-TCCTAATATTTTCCCA
gi|33363 : CAGTGTTTCTTTT--GGG--TCTGATTTGGGG-CGGA-ATATT-GGCC----CCA-TCCCAA-T-CC--G---AAAT---T-CCCTGATATTTTCCCA
gi|33364 : CAGTGTTCTTTT---GGG--TCTGATTTGGGG-CGGGAATGATTGGCC----ACA--TCCAA-TGCC--G---AAAT---T-CCCTGA---TTTCCCA
gi|33365 : CAGTGATTTTTTA--AGG--CCCGTTTTAGGT-CCG--AATTTCGGCCCTTTCCCCTCCCAA-----------AAAT---T-GCC-AATTTTTTCCCA
gi|33366 : GA--CCTAAATTGGGT-CCG--ATATTCGGCT----CCAGTCCCAA-T-CC------AAAG---G-TCCT--T-TTTTCCCA
gi|33367 : --CCTGATTTGGGT-CCG--ATCTTCGGCC----CCATTCCCAA-T-CC--A---AAATGGGG-TCCT--T-TTTTCCCA
gi|33368 : CTGACTTGGGT-CCG--ATATTCAGCC----CCATTCCCAA-T-CC--A---AAA
gi|33369 : GATTTGGGG-CCG--TTAT-CGGCC----CCAGTCCCAA-T-CC--G---AAAT---T-CCCTGATATTTTCC
gi|33370 : TTTGGGC-CCG--ATATTCGGCC----CTAGTCCCAACT-CC--T---AAAT---T-TTCTAA-ATTTCC
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|33359 ): ATTTTGAAGTTATATCTTTTCAATGTTTTTTTTTGGGGGGGGGGGGGGGGGCGAATATCGGCCCCAGTCCCAATCTTAAATTCCCTCTGATATTTCCCCA
Alignments
lowQualScore : 11 2222222222
lowQualScore : 33 1 5 4444444444 3 999 33 3 66 55 2 2 2 8888 444 2 33 0 3
lowQualScore : .. . . .......... . ... .. . .. .. . . . .... ... . .. . .
lowQualScore : 88 4 0 6666666666 1 111 77 8 11 33 5 4 4 4444 444 5 44 9 6
consensus : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTA-AT--------TCCAGTGTTTT-TTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---NAAAT---T-TC--CTAATATTTTCCCA
Reference ( family-815 ) : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTA-AT--------TNCAGTGTTTT-TTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---NAAAT---T-TC--CTAATATTTTCCCA
gi|33353 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTA-AT--------TCCAGTGTTTT-TTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---TAAAT---T-TC--CTAATATTTTCCCA
gi|33354 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTA-AT--------TCCAGTGTTTT-TTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---TAAAT---T-TC--CTAATATTTTCCCA
gi|33355 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTA-AT--------TCCAGTGTTTT-TTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---TAAAT---T-TC--CTAATATTTTCCCA
gi|33356 : AACGAAATTAAAGTGGATGCGAATTTT--CTTAAGTTGA-ATAACTTGTATACAGTGATTT-TTCA--AGG--CCCAATTTGGGT-CTG--AATTTCGGCCCT--TTCCCC-T-CCCA-TAAAT---TGTC----AATTTTTTCCCA
gi|33357 : TTTTCTCCAGAGTCTA-AC--------TGCAGTGTTTT-TTTT--AGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAG
gi|33358 : TATTTTAAAACTG-AT----------CAGTGTTTT-TTTT--GGGGCCCTGTTTTGGGG-C-G--ATATTC-GCCCCAGTCCCAA-T-CCTTAAAAAT---T-TC--CTAATTTTTTCCCA
gi|33359 : ATTTTGAAGTTATATCTT-----TTCAATGTTTTTTTTTGGGGG--GGGGGGGGGGGG-CGA--ATA-TCGGCCCCAGTCCCAA-T-CT---TAAAT---T-CCCTCTGATATTTCCCCA
gi|33360 : GTTTG-AT--------CTCAGTGATTT-TTTTAAGGG--CC--ATTTTGGGTCCG--AATTTCGGCCCT-TTCCCCT-C-CC---AAAAA---T-TG--CTAATTTTTTCCCA
gi|33361 : T--------TTCAGTGGTTT-TTTT--GGG--CC-GATTTGGG--CCG--ATATTCGGCCCCAGT-CCAA-T--A---TAAAT---T-----CTAATATTTTCCCA
gi|33362 : CAGTGTTTT-TT----GGG--CGCCATTTGGG--CCG--ATATTCGGCCCCAG--CCAA-T-CC---TAAAT---T-TC--CTAATATTTTCCCA
gi|33363 : CAGTGTTTC-TTTT--GGG--TCTGATTTGGGG-CGGA-ATATT-GGCCCCA-TCCCAA-T-CC---GAAAT---T-CC--CTGATATTTTCCCA
gi|33364 : CAGTGTTCT-TTT---GGG--TCTGATTTGGGG-CGGGAATGATTGGCCACA--TCCAA-TGCC---GAAAT---T-CC--CTGA---TTTCCCA
gi|33365 : CAGTGATTT-TTTA--AGG--CCCGTTTTAGGT-CCG--AATTTCGGCCCT-TTCCCCT-C-CC---AAAAA---T-TG--CCAATTTTTTCCCA
gi|33366 : GA--CCTAAATTGGGT-CCG--ATATTCGGCTCCAGTCCCAA-T-CC---AAAGG---T-CC--TT----TTTTCCCA
gi|33367 : --CCTGATTTGGGT-CCG--ATCTTCGGCCCCATTCCCAA-T-CC---AAAATGGGG-TC--CT--T-TTTTCCCA
gi|33368 : CTGACTTGGGT-CCG--ATATTCAGCCCCATTCCCAA-T-CC---AAAA
gi|33369 : GATTTGGGG-CCG--TTAT-CGGCCCCAGTCCCAA-T-CC---GAAAT---T-CC--CTGATATTTTCC
gi|33370 : TTTGGGC-CCG--ATATTCGGCCCTAGTCCCAACT-CC---TAAAT---T-TT--CTAA-ATTTCC
Alignments
lowQualScore : 11 2222222222
lowQualScore : 33 3 0000000000 666 33 3 77 55 3 2 2 8888 444 2 0 4
lowQualScore : .. . .......... ... .. . .. .. . . . .... ... . . .
lowQualScore : 88 2 5555555555 000 99 1 11 66 2 5 5 8888 777 7 5 4
consensus : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---NAAAT---T-TCCTAATATTTTCCCA
Reference ( family-815 ) : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---NAAAT---T-TCCTAATATTTTCCCA
gi|33353 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---TAAAT---T-TCCTAATATTTTCCCA
gi|33354 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---TAAAT---T-TCCTAATATTTTCCCA
gi|33355 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---TAAAT---T-TCCTAATATTTTCCCA
gi|33356 : AACGAAATTAAAGTGGATGCGAATTTT--CTTAAGTTGAATAACTTGTATACAGTGATTTTTCA--AGG--CCCAATTTGGGT-CTG--AATTTCGGCCCT--TTCCCC-T-CCCA-TAAAT---TGTC--AATTTTTTCCCA
gi|33357 : TTTTCTCCAGAGTCTAAC--------TGCAGTGTTTTTTTT--AGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAG
gi|33358 : TATTTTAAAACTGAT----------CAGTGTTTTTTTT--GGGGCCCTGTTTTGGGG-C-G--ATATTC-GCCCCAGTCCCAA-T-CCTTAAAAAT---T-TCCTAATTTTTTCCCA
gi|33360 : GTTTGAT--------CTCAGTGATTTTTTTAAGGG--CC--ATTTTGGGTCCG--AATTTCGGCCCT-TTCCCCT-C-CC---AAAAA---T-TGCTAATTTTTTCCCA
gi|33361 : T--------TTCAGTGGTTTTTTT--GGG--CC-GATTTGGG--CCG--ATATTCGGCCCCAGT-CCAA-T--A---TAAAT---T---CTAATATTTTCCCA
gi|33362 : CAGTGTTTTTT----GGG--CGCCATTTGGG--CCG--ATATTCGGCCCCAG--CCAA-T-CC---TAAAT---T-TCCTAATATTTTCCCA
gi|33363 : CAGTGTTTCTTTT--GGG--TCTGATTTGGGG-CGGA-ATATT-GGCCCCA-TCCCAA-T-CC---GAAAT---T-CCCTGATATTTTCCCA
gi|33364 : CAGTGTTCTTTT---GGG--TCTGATTTGGGG-CGGGAATGATTGGCCACA--TCCAA-TGCC---GAAAT---T-CCCTGA---TTTCCCA
gi|33365 : CAGTGATTTTTTA--AGG--CCCGTTTTAGGT-CCG--AATTTCGGCCCT-TTCCCCT-C-CC---AAAAA---T-TGCCAATTTTTTCCCA
gi|33366 : GA--CCTAAATTGGGT-CCG--ATATTCGGCTCCAGTCCCAA-T-CC---AAAGG---T-CCTT----TTTTCCCA
gi|33367 : --CCTGATTTGGGT-CCG--ATCTTCGGCCCCATTCCCAA-T-CC---AAAATGGGG-TCCT--T-TTTTCCCA
gi|33368 : CTGACTTGGGT-CCG--ATATTCAGCCCCATTCCCAA-T-CC---AAAA
gi|33369 : GATTTGGGG-CCG--TTAT-CGGCCCCAGTCCCAA-T-CC---GAAAT---T-CCCTGATATTTTCC
gi|33370 : TTTGGGC-CCG--ATATTCGGCCCTAGTCCCAACT-CC---TAAAT---T-TTCTAA-ATTTCC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|33359 ): ATTTTGAAGTTATATCTTTTCAATGTTTTTTTTTGGGGGGGGGGGGGGGGGCGAATATCGGCCCCAGTCCCAATCTTAAATTCCCTCTGATATTTCCCCA
Alignments
lowQualScore : 11 2222222222
lowQualScore : 33 3 0000000000 666 33 3 77 55 3 2 2 8888 444 2 0 4
lowQualScore : .. . .......... ... .. . .. .. . . . .... ... . . .
lowQualScore : 88 2 5555555555 000 99 1 11 66 2 5 5 8888 777 7 5 4
consensus : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---NAAAT---T-TCCTAATATTTTCCCA
Reference ( family-815 ) : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---NAAAT---T-TCCTAATATTTTCCCA
gi|33353 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---TAAAT---T-TCCTAATATTTTCCCA
gi|33354 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---TAAAT---T-TCCTAATATTTTCCCA
gi|33355 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---TAAAT---T-TCCTAATATTTTCCCA
gi|33356 : AACGAAATTAAAGTGGATGCGAATTTT--CTTAAGTTGAATAACTTGTATACAGTGATTTTTCA--AGG--CCCAATTTGGGT-CTG--AATTTCGGCCCT--TTCCCC-T-CCCA-TAAAT---TGTC--AATTTTTTCCCA
gi|33357 : TTTTCTCCAGAGTCTAAC--------TGCAGTGTTTTTTTT--AGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAG
gi|33358 : TATTTTAAAACTGAT----------CAGTGTTTTTTTT--GGGGCCCTGTTTTGGGG-C-G--ATATTC-GCCCCAGTCCCAA-T-CCTTAAAAAT---T-TCCTAATTTTTTCCCA
gi|33360 : GTTTGAT--------CTCAGTGATTTTTTTAAGGG--CC--ATTTTGGGTCCG--AATTTCGGCCCT-TTCCCCT-C-CC---AAAAA---T-TGCTAATTTTTTCCCA
gi|33361 : T--------TTCAGTGGTTTTTTT--GGG--CC-GATTTGGG--CCG--ATATTCGGCCCCAGT-CCAA-T--A---TAAAT---T---CTAATATTTTCCCA
gi|33362 : CAGTGTTTTTT----GGG--CGCCATTTGGG--CCG--ATATTCGGCCCCAG--CCAA-T-CC---TAAAT---T-TCCTAATATTTTCCCA
gi|33363 : CAGTGTTTCTTTT--GGG--TCTGATTTGGGG-CGGA-ATATT-GGCCCCA-TCCCAA-T-CC---GAAAT---T-CCCTGATATTTTCCCA
gi|33364 : CAGTGTTCTTTT---GGG--TCTGATTTGGGG-CGGGAATGATTGGCCACA--TCCAA-TGCC---GAAAT---T-CCCTGA---TTTCCCA
gi|33365 : CAGTGATTTTTTA--AGG--CCCGTTTTAGGT-CCG--AATTTCGGCCCT-TTCCCCT-C-CC---AAAAA---T-TGCCAATTTTTTCCCA
gi|33366 : GA--CCTAAATTGGGT-CCG--ATATTCGGCTCCAGTCCCAA-T-CC---AAAGG---T-CCTT----TTTTCCCA
gi|33367 : --CCTGATTTGGGT-CCG--ATCTTCGGCCCCATTCCCAA-T-CC---AAAATGGGG-TCCT--T-TTTTCCCA
gi|33368 : CTGACTTGGGT-CCG--ATATTCAGCCCCATTCCCAA-T-CC---AAAA
gi|33369 : GATTTGGGG-CCG--TTAT-CGGCCCCAGTCCCAA-T-CC---GAAAT---T-CCCTGATATTTTCC
gi|33370 : TTTGGGC-CCG--ATATTCGGCCCTAGTCCCAACT-CC---TAAAT---T-TTCTAA-ATTTCC
blockSeqs : AG A AACTTGTATA TAA GC C GT GA G C G TTAA GGG G A
blockSeqs : . A TC T . C G A G . . CAT . . A
blockSeqs : . C TC T . C G . G . . T . . T
blockSeqs : A TG A . C T . G . . T . . T
blockSeqs : . CT T . T G . T . . A . . T
blockSeqs : TT T . C G . G . . T . . A
blockSeqs : . T . T G . G . . T . . A
blockSeqs : T . T G . T . . G . . A
blockSeqs : A . C T . G . . G . . T
blockSeqs : . . T T . T . . A . . A
blockSeqs : . . T T . T . . A . . A
blockSeqs : . T T . G . . A . . .
blockSeqs : . . G . G . . A . . .
blockSeqs : . C . . . . G . . .
blockSeqs : . . . . . T
blockSeqs : . . .
blockSeqCons :
originalCons : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---NAAAT---T-TCCTAATATTTTCCCA
finalCons : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---NAAAT---T-TCCTAATATTTTCCCA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|33359 ): ATTTTGAAGTTATATCTTTTCAATGTTTTTTTTTGGGGGGGGGGGGGGGGGCGAATATCGGCCCCAGTCCCAATCTTAAATTCCCTCTGATATTTCCCCA
Alignments
lowQualScore : 11 2222222222
lowQualScore : 33 3 0000000000 666 33 3 77 55 3 2 2 8888 444 2 0 4
lowQualScore : .. . .......... ... .. . .. .. . . . .... ... . . .
lowQualScore : 88 2 5555555555 000 99 1 11 66 2 5 5 8888 777 7 5 4
consensus : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---NAAAT---T-TCCTAATATTTTCCCA
Reference ( family-815 ) : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---NAAAT---T-TCCTAATATTTTCCCA
gi|33353 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---TAAAT---T-TCCTAATATTTTCCCA
gi|33354 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---TAAAT---T-TCCTAATATTTTCCCA
gi|33355 : TGCAGCGAGATTAA--CGGATTATAGTTTTATTTTGAGTTTAAT--------TCCAGTGTTTTTTTT--GGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAGTCCCAA-T-CC---TAAAT---T-TCCTAATATTTTCCCA
gi|33356 : AACGAAATTAAAGTGGATGCGAATTTT--CTTAAGTTGAATAACTTGTATACAGTGATTTTTCA--AGG--CCCAATTTGGGT-CTG--AATTTCGGCCCT--TTCCCC-T-CCCA-TAAAT---TGTC--AATTTTTTCCCA
gi|33357 : TTTTCTCCAGAGTCTAAC--------TGCAGTGTTTTTTTT--AGG--CCCGATTTGGGG-CCG--ATATTCGGCCCCAG
gi|33358 : TATTTTAAAACTGAT----------CAGTGTTTTTTTT--GGGGCCCTGTTTTGGGG-C-G--ATATTC-GCCCCAGTCCCAA-T-CCTTAAAAAT---T-TCCTAATTTTTTCCCA
gi|33360 : GTTTGAT--------CTCAGTGATTTTTTTAAGGG--CC--ATTTTGGGTCCG--AATTTCGGCCCT-TTCCCCT-C-CC---AAAAA---T-TGCTAATTTTTTCCCA
gi|33361 : T--------TTCAGTGGTTTTTTT--GGG--CC-GATTTGGG--CCG--ATATTCGGCCCCAGT-CCAA-T--A---TAAAT---T---CTAATATTTTCCCA
gi|33362 : CAGTGTTTTTT----GGG--CGCCATTTGGG--CCG--ATATTCGGCCCCAG--CCAA-T-CC---TAAAT---T-TCCTAATATTTTCCCA
gi|33363 : CAGTGTTTCTTTT--GGG--TCTGATTTGGGG-CGGA-ATATT-GGCCCCA-TCCCAA-T-CC---GAAAT---T-CCCTGATATTTTCCCA
gi|33364 : CAGTGTTCTTTT---GGG--TCTGATTTGGGG-CGGGAATGATTGGCCACA--TCCAA-TGCC---GAAAT---T-CCCTGA---TTTCCCA
gi|33365 : CAGTGATTTTTTA--AGG--CCCGTTTTAGGT-CCG--AATTTCGGCCCT-TTCCCCT-C-CC---AAAAA---T-TGCCAATTTTTTCCCA
gi|33366 : GA--CCTAAATTGGGT-CCG--ATATTCGGCTCCAGTCCCAA-T-CC---AAAGG---T-CCTT----TTTTCCCA
gi|33367 : --CCTGATTTGGGT-CCG--ATCTTCGGCCCCATTCCCAA-T-CC---AAAATGGGG-TCCT--T-TTTTCCCA
gi|33368 : CTGACTTGGGT-CCG--ATATTCAGCCCCATTCCCAA-T-CC---AAAA
gi|33369 : GATTTGGGG-CCG--TTAT-CGGCCCCAGTCCCAA-T-CC---GAAAT---T-CCCTGATATTTTCC
gi|33370 : TTTGGGC-CCG--ATATTCGGCCCTAGTCCCAACT-CC---TAAAT---T-TTCTAA-ATTTCC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|33359 ): ATTTTGAAGTTATATCTTTTCAATGTTTTTTTTTGGGGGGGGGGGGGGGGGCGAATATCGGCCCCAGTCCCAATCTTAAATTCCCTCTGATATTTCCCCA