lowQualScore : 1 1111111111111 2 2222222222 1111 1111111 1
lowQualScore : 2 2 2 0 2 55 1 1 33 2 2 5 2 2 2 5 2 5 2 5 2 2 33 5 5 2 4 0000000000000 33 777 1 2 33 77 0 2 2 66 2 2 99999999 77 2 444 0000000000 2 2 888888 1 2 77 0000 6666 44 5555 5 2 2 2 2 7777 33 33 7777777 2 2 2 5 1 9999999 2 9999 6666 5 66 2 2
lowQualScore : . . . . . .. . . .. . . . . . . . . . . . . . .. . . . . ............. .. ... . . .. .. . . . .. . . ........ .. . ... .......... . . ...... . . .. .... .... .. .... . . . . . .... .. .. ....... . . . . . ....... . .... .... . .. . .
lowQualScore : 5 5 5 0 5 99 1 1 44 5 5 0 5 5 5 0 5 0 5 3 9 7 77 3 3 7 0 6666666666666 77 888 3 7 77 33 8 7 7 33 7 7 77777777 33 5 444 9999999999 5 4 111111 7 5 22 6666 2222 88 3333 0 5 5 5 5 8888 00 77 3333333 7 9 9 0 4 3333333 9 3333 1111 7 88 9 9
consensus : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TN--AGA-AA--TTA--TAA-A-C--ACG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A----TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA-------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
Reference ( gi|80334 ) : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TT--A-A-AA--TTA--TAA-A-C--ACG-AA-CCCCTTC--------CA-TAACTGAC-G---A----------TT-TTTT-C-A----TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTGCCAAAA-------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80335 : AAAG-AAAAAA-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TT--AGA-AA--TTA--TAA-A-C--ACG-AA-CCCCTTC--------CA-CAACTAA--G---A----------TT-TTTT-C-A----TCAG-AT-TTTTT----C--C-T-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTTA---A--AAAC-TGA-T-ATTTTCCCAAAA-------T-TCA---GAA----AGAG-T--CG-AAA-AATTAG
gi|80336 : AAAG-AAAA-AAG-A-CG--AAAACAGTGAAGAATTA--C-AG-CA-TTAA-G-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTT-AAA-----T-------CAG--TT--A-G-AA--TTA---AA-A-C--ACG-AA-CCCCTTC--------CA-TAACTGAC-G---A----------TT-TTTT-CCA----TCAG-AA-TTTTTTCTGC--C-G-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTA----A--AAAC-TGA-T-ATTTTGCCAAAA---------TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80339 : AAAG-AAAA-A-GGA-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAG-G--CGT-CATA-GTC---TTAAA-----T-------CAG--TA--AGA-AA--TTA--TAA-A-C--AGG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A----TCAG-AA--TTTT----C--G-C-AA----GTG-T-C-GATA-AAT-TA----GA-AATT--TTT----C--AAAT-TGA-T-AATTTCCCAAAA-------T-TCC---AAA----AGTG-T--GG-GAA-AATTAG
gi|80337 : AAAG-AAAA-A-GGA-CG--GAAACAGTAAAGAATTA--C-GGACA-TTAAAG-C-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CAT-CATA-GTC-TTTTAAA-----T-------CAG--TA--ACA-AA--TTA--TAA-A-C--ACG-AA-GCCCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A----TCAG-AACTTTTT----C--C-C-AA----GTG-T-C-GAAA-AATATAC---AA-CAAT--TTC----A--AAAC-TGA-T-ATTTTCCCAAAA-------T-TCC---AAA----AGTG-T--CG-AAA-AATTAG
gi|80338 : AAAG-AAAG---G-A--G--AAAACATTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T---TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAA------T-------CAG--TA--A-G-AA--ATAATTCA-A-C--ATG-AA-CCCCTTC--------CA-CAGCTGAC-G---A----------TT-TTTT-CCA----TCAG-AA-TTTTTT---C--C-C-TA----GTG-T-T-GAAA-AAT-TA----GA-AATT--TTTC---A--AAAC-TGA-T-ATTTTCCCAAAA-------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80347 : aaatAAGA-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-T-AAAG-A-T-AA--A-T-A-TA-AT-CAC-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TT--AGA-AA--TTA--T-A-A-C--ATGAAA-CCCCTTC--------CACCAACTGAC-G---A----------TT-TTT----A----TCAG-AT-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TT----GA-GA-T--TTA----A--AAAC-TGA-G-ATTTTCCCAATA-------TCTCA---GAA----AGTG-TACCG-AAA-TATTAG
gi|80340 : AAAG-AAAA-A-G-A-CG--AAAAACGTGA-GAAT-A--T-CGG-A-TTAAAG-A-T-AA--A-T-A-TA-AT--AT-TTAG-G--CGT-CATA-GTC-T----AA-----T-------CAG--TA--AGA-AA--TTA--TAA-A-C--AGG-AA-CCCCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A----TC-G-AA--TTTT----C--G-C-AA----GTG-T-C-GATA-AAT-TA----GA-AATT--TTT----C--AAAT-TGA-T-AATTCCTCCAAA-------T-TC----CAA----AGTG-T--GG-GAA-AATTAG
gi|80341 : AAAG-AAAA-A-G-A-CG--AAAAACGTGA-GAAT-A--T-CGG-A-TTAAAG-A-T-AA--A-T-A-TA-AT--AT-TTAG-G--CGT-CATA-GTC-T----AA-----T-------CAG--TA--AGA-AA--TTA--TAA-A-C--AGG-AA-CCCCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A----TC-G-AA--TTTT----C--G-C-AA----GTG-T-C-GATA-AAT-TA----GA-AATT--TTT----C--AAAT-TGACT-AATTCCTCCAAA-------T-TC----CAA----AGTG-T--GG-GAA-AATTAG
gi|80342 : AAAG-AAAA-G-GGA-TG--AAAACATTGAAGAATTG--CCGGGCA-TTACAG-AAT-AA-GA-T-A-TA-TT-CAT-TTAA-G--C-T-CATA-GTC-TTTTAATCTGGTT-------CAG--TA--A-G-AA--TTA--TCACA-C--ACA-A----CCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A----TCAG-AATTTTTT----C--C-C-CT----GTGAT-CAGAAT-AAT-TA----GA-TATT--TTT----C--AAAC-TG--T-ATTCTTCCCAAA-------T-TCA---CGA----AGTGCT--CGAAAA-AATTA
gi|80343 : AAAGCAAAA-A-G-A-CAC-GAAACA-T-AAGAATTA--C-AGGCACTTAAAGCA-TTAA-GACT-A-TA-CT-CATCTTAA-G--CGT-CATAAGTC-TTTTAA--------------C-G--TT--A-G-AAATTTA--TAA-A-CTGACG-AAACCCCT----------CA-CAACTGAC-G---A----------TTATTTT-C------TCAGGAA-TTTTT----T--C-C-GA----GTGGT-C-GACA-AAT--A----GA-GATTATTTT----ACAAAAC-TGA-T-TCTTCCCCAAAA-------T-TCA---G-A----AGTG-T--CG-AAA-ATTTAG
gi|80344 : AAAG-AAAA-A-G-ATCG--AAAAC-GTGA-GAAT-A--C-AGGC--TTAAAG-A-T-AA-GAAT-AATA-AT-CAT-TTAA-GAGCGTTCATA-GTC-TTT-AAA-----T-------CAG--TTAGA-A-AA--TTA--TAA-CTC--AGA-AA-CCCCTTCCATATCCACA-TAACTGAC-G---ATTGATTGATTTT-TTTT-C-AT---TCAG-AA-TTTTT----
gi|80346 : AAGA-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-AA-At
gi|80345 : AAGA-AAAA-A-G-C-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-AA-AT-
gi|80348 : AAG-AAAA-G-G-A-TG--AAAACATTGAAGAATCAGCC-GGGCA-TTACAG-A-T-AA-GA-TCA-TA-ATTCAT-TTAA-G--CCT-CATAAGTC-TTT-AAA-----TTCTGGTTCAG--CT--A-AGAA--TTA--TCA-A-C--ACA-A---CCTTTC--------CA-CAACTGAC-G---A----------TT-TTTTTC-A----TC-G-AA-TTTTTTC--C--C-C-TA----GTG-T-C-GAAT-AAT-TA----GA-TTTT--GTT----C--AAACATG--T-ATTCTTCCCAAA-------T-TCAC--GAA----AGTGCT--CG-AAA-AA
gi|80349 : -AAAA-A-GCA-CGGAAAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-CTCCAT-TTAA-G--CGT-CATA-GTC--TTTAAA-----T-------CAGCATT--AGA-AA--TTA--TAA-A-C--ACG-AA-C-----C--------CA-GACCCGAC-GAACA----------TT-TTCT-C-
gi|80350 : aga-AAAG-A-G-A-CG--AAAACATTGAGG--TTA--T-GGGCA-TTAAAGAA-T-AAGGA-T-ATTATAT-CAT-TTAACG--AGTCCAAC-GTCTTTTTAAAT----T-------CAA--TC--G-A-AG--ATAATTAA-A-CG-AC--AA-CCCCCTC--------CA-CGACTGACTG---A----------TG-TTT-----------------TTTTT----CGTA-C-AA----GTG-T---GAAATAAT-TATTTTGATAATT--CTTCA--A--AAAC-TGA-TCATTCTTCC-AAA-------T-TCAGCTGAA----AGTG-TG-CG-AAATAATAAGc
gi|80351 : gaAA-G--CGT-------TC-TTTTAAA-----T-------CAG--TA--AGA-AA--TTA--TTA-A-C--ACG-CA-CCCCTTC--------CA-CA
gi|80354 : AACTGAT-----A----------TT-TTCC-C-AAAATTCAG-AA------------------A----GTG-T-C-GAAA-AAT-TA----G
gi|80352 : tcatcagaattttttcctgagtgtcgaaaaaatagagatttttaaAACTGAC-G---A----------TT-TTTT-C-A----TCAG-AA-TTTTT----C--CTC-AAGTACGTG-T-T-GAAA-AAT-TA----GA-GAGT--CGA----A--AAAC-T
gi|80354 : T-C-A----TCAG-AA-TTTTT----T--C-CTGA----GTG-T-C-GAAA-AAA-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA-------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80353 : -TTTTT----CG-C-C-GA----GTG-TTC-GAAA-AAT-TA----GA-GATT--TTTAAAAA--AAAC-TGA-T-ATTTT-CCAAAAAAATTTTT-TCA---GAAAAACAGTG-T--CG---A-AATTAG
Alignments
lowQualScore : 2222222222 1111 1111111
lowQualScore : 2 2 2 9 2 55 0 33 2 2 4 2 2 2 4 2 4 2 5 2 2 33 5 5 22 0 9999999999999 33 1 2 2 2 22 2 2 55 2 2 99999999 2 2 444 0000000000 2 2 4 2 1 2 4 0000 55 2 33 5555 5 2 2 2 2 7777 2 33 5555555 2 2 2 0 777777 2 8888 5555 5 66 2 2
lowQualScore : . . . . . .. . .. . . . . . . . . . . . . . .. . . .. . ............. .. . . . . .. . . .. . . ........ . . ... .......... . . . . . . . .... .. . .. .... . . . . . .... . .. ....... . . . . ...... . .... .... . .. . .
lowQualScore : 4 4 4 4 4 66 5 22 4 4 7 4 4 4 7 4 7 4 0 7 5 44 0 0 77 1 4444444444444 44 0 5 5 5 77 5 5 99 5 5 11111111 5 5 444 9999999999 5 4 7 5 7 5 7 6666 99 5 22 3333 0 5 5 5 5 8888 5 44 7777777 5 7 7 7 777777 7 1111 7777 3 33 7 7
consensus : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TNAG-AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
Reference ( family-750 ) : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TNAG-AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80334 : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TTA--AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-TAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTGCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80335 : AAAG-AAAAAA-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TTAG-AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-CAACTAA--G---A----------TT-TTTT-C-A-TCAG-AT-TTTTT----C--C-T-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTTA---A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGAG-T--CG-AAA-AATTAG
gi|80336 : AAAG-AAAA-AAG-A-CG--AAAACAGTGAAGAATTA--C-AG-CA-TTAA-G-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTT-AAA-----T-------CAG--TTAG-AA-TT-A---AA-A-C--ACG-AA-CCCCTTC--------CA-TAACTGAC-G---A----------TT-TTTT-CCA-TCAG-AA-TTTTTTCTGC--C-G-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTA----A--AAAC-TGA-T-ATTTTGCCAAAA--------TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80337 : AAAG-AAAA-A-GGA-CG--GAAACAGTAAAGAATTA--C-GGACA-TTAAAG-C-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CAT-CATA-GTC-TTTTAAA-----T-------CAG--TAAC-AAATT-A-T-AA-A-C--ACG-AA-GCCCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A-TCAG-AACTTTTT----C--C-C-AA----GTG-T-C-GAAA-AATATAC---AA-CAAT--TTC----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCC---AAA----AGTG-T--CG-AAA-AATTAG
gi|80338 : AAAG-AAAG---G-A--G--AAAACATTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T---TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAA------T-------CAG--TAAG-AAATA-A-TTCA-A-C--ATG-AA-CCCCTTC--------CA-CAGCTGAC-G---A----------TT-TTTT-CCA-TCAG-AA-TTTTTT---C--C-C-TA----GTG-T-T-GAAA-AAT-TA----GA-AATT--TTTC---A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80339 : aaatAAAG-AAAA-A-GGA-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAG-G--CGT-CATA-GTC---TTAAA-----T-------CAG--TAAG-AAATT-A-T-AA-A-C--AGG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA--TTTT----C--G-C-AA----GTG-T-C-GATA-AAT-TA----GA-AATT--TTT----C--AAAT-TGA-T-AATTTCCCAAAA------T-TCC---AAA----AGTG-T--GG-GAA-AATTAG
gi|80340 : AAAG-AAAA-A-G-A-CG--AAAAACGTGA-GAATAT--C-GG--A-TTAAAG-A-T-AA--A-T-A-TA-AT--AT-TTAG-G--CGT-CATA-GTC-T----AA-----T-------CAG--TAAG-AAATT-A-T-AA-A-C--AGG-AA-CCCCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A-TC-G-AA--TTTT----C--G-C-AA----GTG-T-C-GATA-AAT-TA----GA-AATT--TTT----C--AAAT-TGA-T-AATTCCTCCAAA------T-TC----CAA----AGTG-T--GG-GAA-AATTAG
gi|80341 : AAAG-AAAA-A-G-A-CG--AAAAACGTGA-GAATAT--C-GG--A-TTAAAG-A-T-AA--A-T-A-TA-AT--AT-TTAG-G--CGT-CATA-GTC-T----AA-----T-------CAG--TAAG-AAATT-A-T-AA-A-C--AGG-AA-CCCCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A-TC-G-AA--TTTT----C--G-C-AA----GTG-T-C-GATA-AAT-TA----GA-AATT--TTT----C--AAAT-TGACT-AATTCCTCCAAA------T-TC----CAA----AGTG-T--GG-GAA-AATTAG
gi|80342 : AAAG-AAAA-G-GGA-TG--AAAACATTGAAGAATTG--CCGGGCA-TTACAG-AAT-AA-GA-T-A-TA-TT-CAT-TTAA-G--C-T-CATA-GTC-TTTTAATCTGGTT-------CAG--TAAG-AA-TT-A-T-CACA-C--ACA-A----CCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A-TCAG-AATTTTTT----C--C-C-CT----GTGAT-CAGAAT-AAT-TA----GA-TATT--TTT----C--AAAC-TG--T-ATTCTTCCCAAA------T-TCA---CGA----AGTGCT--CGAAAA-AATTA
gi|80343 : AAAGCAAAA-A-G-A-CAC-GAAACA-T-AAGAATTA--C-AGGCACTTAAAGCA-TTAA-GACT-A-TA-CT-CATCTTAA-G--CGT-CATAAGTC-TTTTAA--------------C-G--TTAG-AAATTTA-T-AA-A-CTGACG-AAACCCCT----------CA-CAACTGAC-G---A----------TTATTTT-C---TCAGGAA-TTTTT----T--C-C-GA----GTGGT-C-GACA-AAT--A----GA-GATTATTTT----ACAAAAC-TGA-T-TCTTCCCCAAAA------T-TCA---G-A----AGTG-T--CG-AAA-ATTTAG
gi|80344 : AAAG-AAAA-A-G-ATCG--AAAAC-GTGA-GAAT-A--C-AGGC--TTAAAG-A-T-AA-GAAT-AATA-AT-CAT-TTAA-GAGCGTTCATA-GTC--TTTAAA-----T-------CAG--TTAGAAAATT-A-T-AA-CTC--AGA-AA-CCCCTTCCATATCCACA-TAACTGAC-G---ATTGATTGATTTT-TTTT-C-ATTCAG-AA-TTTTT----
gi|80345 : AAGA-AAAA-A-G-C-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-AA-AT-t
gi|80346 : AAGA-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-AA-A
gi|80347 : AAGA-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-T-AAAG-A-T-AA--A-T-A-TA-AT-CAC-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TTAG-AAATT-A-T--A-A-C--ATGAAA-CCCCTTC--------CACCAACTGAC-G---A----------TT-TTT----A-TCAG-AT-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TT----GA-GA-T--TTA----A--AAAC-TGA-G-ATTTTCCCAATA------TCTCA---GAA----AGTG-TACCG-AAA-TATTAG
gi|80348 : AAG-AAAA-G-G-A-TG--AAAACATTGAAGAATCAGCC-GGGCA-TTACAG-A-T-AA-GA-TCA-TA-ATTCAT-TTAA-G--CCT-CATAAGTC-TTT-AAA-----TTCTGGTTCAG--CTAA-GAATT-A-T-CA-A-C--ACA-A---CCTTTC--------CA-CAACTGAC-G---A----------TT-TTTTTC-A-TC-G-AA-TTTTTTC--C--C-C-TA----GTG-T-C-GAAT-AAT-TA----GA-TTTT--GTT----C--AAACATG--T-ATTCTTCCCAAA------T-TCAC--GAA----AGTGCT--CG-AAA-AA
gi|80349 : -AAAA-A-GCA-CGGAAAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-CTCCAT-TTAA-G--CGT-CATA-GTC--TTTAAA-----T-------CAGCATTAG-AAATT-A-T-AA-A-C--ACG-AA-C-----C--------CA-GACCCGAC-GAACA----------TT-TTCT-C-
gi|80350 : aga-AAAG-A-G-A-CG--AAAACATTGAGG--TTA--T-GGGCA-TTAAAGAA-T-AAGGA-T-ATTATAT-CAT-TTAACG--AGTCCAAC-GTCTTTTTAAAT----T-------CAA--TCGA-AGATA-ATT-AA-A-CG-AC--AA-CCCCCTC--------CA-CGACTGACTG---A----------TG-TTT--------------TTTTT----CGTA-C-AA----GTG-T---GAAATAAT-TATTTTGATAATT--CTTCA--A--AAAC-TGA-TCATTCTTCC-AAA------T-TCAGCTGAA----AGTG-TG-CG-AAATAATAAGc
gi|80351 : gaAA-G--CGT-------TC-TTTTAAA-----T-------CAG--TAAG-AAATT-A-T-TA-A-C--ACG-CA-CCCCTTC--------CA-CA
gi|80352 : AACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--CTC-AAGTACGTG-T-T-GAAA-AAT-TA----GA-GAGT--CGA----A--AAAC-T
gi|80353 : -TTTTT----CG-C-C-GA----GTG-TTC-GAAA-AAT-TA----GA-GATT--TTTAAAAA--AAAC-TGA-T-ATTTTCCAAAAAAATTTTT-TCA---GAAAAACAGTG-T--CG---A-AATTAG
gi|80354 : tttttttttttT-C-A-TCAG-AA-TTTTT----T--C-CTGA----GTG-T-C-GAAA-AAA-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
Alignments
lowQualScore : 2222222222 1111 1111111
lowQualScore : 2 2 2 9 2 55 0 33 2 2 4 2 2 2 4 2 4 2 5 2 2 33 5 5 22 0 9999999999999 33 1 2 2 2 22 2 2 55 2 2 99999999 2 2 444 0000000000 2 2 4 2 1 2 4 0000 55 2 33 5555 5 2 2 2 2 7777 2 33 5555555 2 2 2 0 777777 2 8888 5555 5 66 2 2
lowQualScore : . . . . . .. . .. . . . . . . . . . . . . . .. . . .. . ............. .. . . . . .. . . .. . . ........ . . ... .......... . . . . . . . .... .. . .. .... . . . . . .... . .. ....... . . . . ...... . .... .... . .. . .
lowQualScore : 4 4 4 4 4 66 5 22 4 4 7 4 4 4 7 4 7 4 0 7 5 44 0 0 77 1 4444444444444 44 0 5 5 5 77 5 5 99 5 5 11111111 5 5 444 9999999999 5 4 7 5 7 5 7 6666 99 5 22 3333 0 5 5 5 5 8888 5 44 7777777 5 7 7 7 777777 7 1111 7777 3 33 7 7
consensus : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TNAG-AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
Reference ( family-750 ) : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TNAG-AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80334 : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TTA--AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-TAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTGCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80335 : AAAG-AAAAAA-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TTAG-AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-CAACTAA--G---A----------TT-TTTT-C-A-TCAG-AT-TTTTT----C--C-T-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTTA---A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGAG-T--CG-AAA-AATTAG
gi|80336 : AAAG-AAAA-AAG-A-CG--AAAACAGTGAAGAATTA--C-AG-CA-TTAA-G-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTT-AAA-----T-------CAG--TTAG-AA-TT-A---AA-A-C--ACG-AA-CCCCTTC--------CA-TAACTGAC-G---A----------TT-TTTT-CCA-TCAG-AA-TTTTTTCTGC--C-G-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTA----A--AAAC-TGA-T-ATTTTGCCAAAA--------TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80337 : AAAG-AAAA-A-GGA-CG--GAAACAGTAAAGAATTA--C-GGACA-TTAAAG-C-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CAT-CATA-GTC-TTTTAAA-----T-------CAG--TAAC-AAATT-A-T-AA-A-C--ACG-AA-GCCCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A-TCAG-AACTTTTT----C--C-C-AA----GTG-T-C-GAAA-AATATAC---AA-CAAT--TTC----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCC---AAA----AGTG-T--CG-AAA-AATTAG
gi|80338 : AAAG-AAAG---G-A--G--AAAACATTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T---TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAA------T-------CAG--TAAG-AAATA-A-TTCA-A-C--ATG-AA-CCCCTTC--------CA-CAGCTGAC-G---A----------TT-TTTT-CCA-TCAG-AA-TTTTTT---C--C-C-TA----GTG-T-T-GAAA-AAT-TA----GA-AATT--TTTC---A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80339 : aaatAAAG-AAAA-A-GGA-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAG-G--CGT-CATA-GTC---TTAAA-----T-------CAG--TAAG-AAATT-A-T-AA-A-C--AGG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA--TTTT----C--G-C-AA----GTG-T-C-GATA-AAT-TA----GA-AATT--TTT----C--AAAT-TGA-T-AATTTCCCAAAA------T-TCC---AAA----AGTG-T--GG-GAA-AATTAG
gi|80340 : AAAG-AAAA-A-G-A-CG--AAAAACGTGA-GAATAT--C-GG--A-TTAAAG-A-T-AA--A-T-A-TA-AT--AT-TTAG-G--CGT-CATA-GTC-T----AA-----T-------CAG--TAAG-AAATT-A-T-AA-A-C--AGG-AA-CCCCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A-TC-G-AA--TTTT----C--G-C-AA----GTG-T-C-GATA-AAT-TA----GA-AATT--TTT----C--AAAT-TGA-T-AATTCCTCCAAA------T-TC----CAA----AGTG-T--GG-GAA-AATTAG
gi|80341 : AAAG-AAAA-A-G-A-CG--AAAAACGTGA-GAATAT--C-GG--A-TTAAAG-A-T-AA--A-T-A-TA-AT--AT-TTAG-G--CGT-CATA-GTC-T----AA-----T-------CAG--TAAG-AAATT-A-T-AA-A-C--AGG-AA-CCCCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A-TC-G-AA--TTTT----C--G-C-AA----GTG-T-C-GATA-AAT-TA----GA-AATT--TTT----C--AAAT-TGACT-AATTCCTCCAAA------T-TC----CAA----AGTG-T--GG-GAA-AATTAG
gi|80342 : AAAG-AAAA-G-GGA-TG--AAAACATTGAAGAATTG--CCGGGCA-TTACAG-AAT-AA-GA-T-A-TA-TT-CAT-TTAA-G--C-T-CATA-GTC-TTTTAATCTGGTT-------CAG--TAAG-AA-TT-A-T-CACA-C--ACA-A----CCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A-TCAG-AATTTTTT----C--C-C-CT----GTGAT-CAGAAT-AAT-TA----GA-TATT--TTT----C--AAAC-TG--T-ATTCTTCCCAAA------T-TCA---CGA----AGTGCT--CGAAAA-AATTA
gi|80343 : AAAGCAAAA-A-G-A-CAC-GAAACA-T-AAGAATTA--C-AGGCACTTAAAGCA-TTAA-GACT-A-TA-CT-CATCTTAA-G--CGT-CATAAGTC-TTTTAA--------------C-G--TTAG-AAATTTA-T-AA-A-CTGACG-AAACCCCT----------CA-CAACTGAC-G---A----------TTATTTT-C---TCAGGAA-TTTTT----T--C-C-GA----GTGGT-C-GACA-AAT--A----GA-GATTATTTT----ACAAAAC-TGA-T-TCTTCCCCAAAA------T-TCA---G-A----AGTG-T--CG-AAA-ATTTAG
gi|80344 : AAAG-AAAA-A-G-ATCG--AAAAC-GTGA-GAAT-A--C-AGGC--TTAAAG-A-T-AA-GAAT-AATA-AT-CAT-TTAA-GAGCGTTCATA-GTC--TTTAAA-----T-------CAG--TTAGAAAATT-A-T-AA-CTC--AGA-AA-CCCCTTCCATATCCACA-TAACTGAC-G---ATTGATTGATTTT-TTTT-C-ATTCAG-AA-TTTTT----
gi|80345 : AAGA-AAAA-A-G-C-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-AA-AT-t
gi|80346 : AAGA-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-AA-A
gi|80347 : AAGA-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-T-AAAG-A-T-AA--A-T-A-TA-AT-CAC-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TTAG-AAATT-A-T--A-A-C--ATGAAA-CCCCTTC--------CACCAACTGAC-G---A----------TT-TTT----A-TCAG-AT-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TT----GA-GA-T--TTA----A--AAAC-TGA-G-ATTTTCCCAATA------TCTCA---GAA----AGTG-TACCG-AAA-TATTAG
gi|80348 : AAG-AAAA-G-G-A-TG--AAAACATTGAAGAATCAGCC-GGGCA-TTACAG-A-T-AA-GA-TCA-TA-ATTCAT-TTAA-G--CCT-CATAAGTC-TTT-AAA-----TTCTGGTTCAG--CTAA-GAATT-A-T-CA-A-C--ACA-A---CCTTTC--------CA-CAACTGAC-G---A----------TT-TTTTTC-A-TC-G-AA-TTTTTTC--C--C-C-TA----GTG-T-C-GAAT-AAT-TA----GA-TTTT--GTT----C--AAACATG--T-ATTCTTCCCAAA------T-TCAC--GAA----AGTGCT--CG-AAA-AA
gi|80349 : -AAAA-A-GCA-CGGAAAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-CTCCAT-TTAA-G--CGT-CATA-GTC--TTTAAA-----T-------CAGCATTAG-AAATT-A-T-AA-A-C--ACG-AA-C-----C--------CA-GACCCGAC-GAACA----------TT-TTCT-C-
gi|80350 : aga-AAAG-A-G-A-CG--AAAACATTGAGG--TTA--T-GGGCA-TTAAAGAA-T-AAGGA-T-ATTATAT-CAT-TTAACG--AGTCCAAC-GTCTTTTTAAAT----T-------CAA--TCGA-AGATA-ATT-AA-A-CG-AC--AA-CCCCCTC--------CA-CGACTGACTG---A----------TG-TTT--------------TTTTT----CGTA-C-AA----GTG-T---GAAATAAT-TATTTTGATAATT--CTTCA--A--AAAC-TGA-TCATTCTTCC-AAA------T-TCAGCTGAA----AGTG-TG-CG-AAATAATAAGc
gi|80351 : gaAA-G--CGT-------TC-TTTTAAA-----T-------CAG--TAAG-AAATT-A-T-TA-A-C--ACG-CA-CCCCTTC--------CA-CA
gi|80352 : AACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--CTC-AAGTACGTG-T-T-GAAA-AAT-TA----GA-GAGT--CGA----A--AAAC-T
gi|80353 : -TTTTT----CG-C-C-GA----GTG-TTC-GAAA-AAT-TA----GA-GATT--TTTAAAAA--AAAC-TGA-T-ATTTTCCAAAAAAATTTTT-TCA---GAAAAACAGTG-T--CG---A-AATTAG
gi|80354 : tttttttttttT-C-A-TCAG-AA-TTTTT----T--C-CTGA----GTG-T-C-GAAA-AAA-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
blockSeqs : C A A G T GA GC C C C A T G C C A T T C C AG T A TT TTCTGGTT CA T A T T TC C T TG A A CATATCCA C T AAC TTGATTGATT A T C T A G C TCTG GT T TG GTAC A T A T A TTTT T AT AAAAA A C C AATTTT C AGCT AAAC C AC A T
blockSeqs : . . . G . C . . . A . . . A . T . C . . . C A T CTGGTT . T . . . A . . G . . . . . . T . . C . A . T TC G . G . G . . . . C . . ACA . . . . . AC . C G . .
blockSeqs : . . . G . . . . . . . . . . . . . . . . . . . T TT . A . . . A . . . . . . . . . T . . . . A . . T . . G . . . . . . . . . CAA . . . . . A . . . . .
blockSeqs : . . . C . . . . . . . . . . . . . . . . . . . T T . A . . . A . . . . . . . . . T . . . . A . . . . . A . . . . . . . . . AA . . . . . A . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . T T . A . . . A . . . . . . . . . T . . . . A . . . . . T . . . . . . . . . CA . . . . . C . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . T T . A . . . A . . . . . . . . . . . . . . A . . . . . A . . . . . . . . . A . . . . . A . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . T T . A . . . A . . . . . . . . . . . . . . A . . . . . A . . . . . . . . . A . . . . . C . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . T T . A . . . C . . . . . . . . . . . . . . A . . . . . A . . . . . . . . . C . . . . . A . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . T T . T . . . A . . . . . . . . . . . . . . A . . . . . C . . . . . . . . . C . . . . . A . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . T T . T . . . A . . . . . . . . . . . . . . A . . . . . G . . . . . . . . . C . . . . . A . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . T T . T . . . C . . . . . . . . . . . . . . A . . . . . G . . . . . . . . . C . . . . . A . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . T T . T . . . A . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . A . . . . . A . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . T . T . . . A . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . C . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . T . C . . . T . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . A . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . G . . . . . . . . . A .
blockSeqs : . . . . . . . . . . . . . . . . . . . . .
blockSeqCons :
originalCons : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TNAG-AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
finalCons : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TNAG-AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
Alignments
lowQualScore : 2222222222 1111 1111111
lowQualScore : 2 2 2 9 2 55 0 33 2 2 4 2 2 2 4 2 4 2 5 2 2 33 5 5 22 0 9999999999999 33 1 2 2 2 22 2 2 55 2 2 99999999 2 2 444 0000000000 2 2 4 2 1 2 4 0000 55 2 33 5555 5 2 2 2 2 7777 2 33 5555555 2 2 2 0 777777 2 8888 5555 5 66 2 2
lowQualScore : . . . . . .. . .. . . . . . . . . . . . . . .. . . .. . ............. .. . . . . .. . . .. . . ........ . . ... .......... . . . . . . . .... .. . .. .... . . . . . .... . .. ....... . . . . ...... . .... .... . .. . .
lowQualScore : 4 4 4 4 4 66 5 22 4 4 7 4 4 4 7 4 7 4 0 7 5 44 0 0 77 1 4444444444444 44 0 5 5 5 77 5 5 99 5 5 11111111 5 5 444 9999999999 5 4 7 5 7 5 7 6666 99 5 22 3333 0 5 5 5 5 8888 5 44 7777777 5 7 7 7 777777 7 1111 7777 3 33 7 7
consensus : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TNAG-AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
Reference ( family-750 ) : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TNAG-AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80334 : AAAG-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TTA--AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-TAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTGCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80335 : AAAG-AAAAAA-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TTAG-AAATT-A-T-AA-A-C--ACG-AA-CCCCTTC--------CA-CAACTAA--G---A----------TT-TTTT-C-A-TCAG-AT-TTTTT----C--C-T-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTTA---A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGAG-T--CG-AAA-AATTAG
gi|80336 : AAAG-AAAA-AAG-A-CG--AAAACAGTGAAGAATTA--C-AG-CA-TTAA-G-A-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTT-AAA-----T-------CAG--TTAG-AA-TT-A---AA-A-C--ACG-AA-CCCCTTC--------CA-TAACTGAC-G---A----------TT-TTTT-CCA-TCAG-AA-TTTTTTCTGC--C-G-GA----GTG-T-C-GAAA-AAT-TA----GA-GATT--TTA----A--AAAC-TGA-T-ATTTTGCCAAAA--------TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80337 : AAAG-AAAA-A-GGA-CG--GAAACAGTAAAGAATTA--C-GGACA-TTAAAG-C-T-AA-GA-T-A-TA-AT-CAT-TTAA-G--CAT-CATA-GTC-TTTTAAA-----T-------CAG--TAAC-AAATT-A-T-AA-A-C--ACG-AA-GCCCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A-TCAG-AACTTTTT----C--C-C-AA----GTG-T-C-GAAA-AATATAC---AA-CAAT--TTC----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCC---AAA----AGTG-T--CG-AAA-AATTAG
gi|80338 : AAAG-AAAG---G-A--G--AAAACATTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T---TA-AT-CAT-TTAA-G--CGT-CATA-GTC-TTTTAA------T-------CAG--TAAG-AAATA-A-TTCA-A-C--ATG-AA-CCCCTTC--------CA-CAGCTGAC-G---A----------TT-TTTT-CCA-TCAG-AA-TTTTTT---C--C-C-TA----GTG-T-T-GAAA-AAT-TA----GA-AATT--TTTC---A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG
gi|80339 : aaatAAAG-AAAA-A-GGA-CG--AAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-AT-CAT-TTAG-G--CGT-CATA-GTC---TTAAA-----T-------CAG--TAAG-AAATT-A-T-AA-A-C--AGG-AA-CCCCTTC--------CA-CAACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA--TTTT----C--G-C-AA----GTG-T-C-GATA-AAT-TA----GA-AATT--TTT----C--AAAT-TGA-T-AATTTCCCAAAA------T-TCC---AAA----AGTG-T--GG-GAA-AATTAG
gi|80340 : AAAG-AAAA-A-G-A-CG--AAAAACGTGA-GAATAT--C-GG--A-TTAAAG-A-T-AA--A-T-A-TA-AT--AT-TTAG-G--CGT-CATA-GTC-T----AA-----T-------CAG--TAAG-AAATT-A-T-AA-A-C--AGG-AA-CCCCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A-TC-G-AA--TTTT----C--G-C-AA----GTG-T-C-GATA-AAT-TA----GA-AATT--TTT----C--AAAT-TGA-T-AATTCCTCCAAA------T-TC----CAA----AGTG-T--GG-GAA-AATTAG
gi|80341 : AAAG-AAAA-A-G-A-CG--AAAAACGTGA-GAATAT--C-GG--A-TTAAAG-A-T-AA--A-T-A-TA-AT--AT-TTAG-G--CGT-CATA-GTC-T----AA-----T-------CAG--TAAG-AAATT-A-T-AA-A-C--AGG-AA-CCCCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A-TC-G-AA--TTTT----C--G-C-AA----GTG-T-C-GATA-AAT-TA----GA-AATT--TTT----C--AAAT-TGACT-AATTCCTCCAAA------T-TC----CAA----AGTG-T--GG-GAA-AATTAG
gi|80342 : AAAG-AAAA-G-GGA-TG--AAAACATTGAAGAATTG--CCGGGCA-TTACAG-AAT-AA-GA-T-A-TA-TT-CAT-TTAA-G--C-T-CATA-GTC-TTTTAATCTGGTT-------CAG--TAAG-AA-TT-A-T-CACA-C--ACA-A----CCTTC--------CA-CAACTGAC-G---AT---------TT-TTTT-C-A-TCAG-AATTTTTT----C--C-C-CT----GTGAT-CAGAAT-AAT-TA----GA-TATT--TTT----C--AAAC-TG--T-ATTCTTCCCAAA------T-TCA---CGA----AGTGCT--CGAAAA-AATTA
gi|80343 : AAAGCAAAA-A-G-A-CAC-GAAACA-T-AAGAATTA--C-AGGCACTTAAAGCA-TTAA-GACT-A-TA-CT-CATCTTAA-G--CGT-CATAAGTC-TTTTAA--------------C-G--TTAG-AAATTTA-T-AA-A-CTGACG-AAACCCCT----------CA-CAACTGAC-G---A----------TTATTTT-C---TCAGGAA-TTTTT----T--C-C-GA----GTGGT-C-GACA-AAT--A----GA-GATTATTTT----ACAAAAC-TGA-T-TCTTCCCCAAAA------T-TCA---G-A----AGTG-T--CG-AAA-ATTTAG
gi|80344 : AAAG-AAAA-A-G-ATCG--AAAAC-GTGA-GAAT-A--C-AGGC--TTAAAG-A-T-AA-GAAT-AATA-AT-CAT-TTAA-GAGCGTTCATA-GTC--TTTAAA-----T-------CAG--TTAGAAAATT-A-T-AA-CTC--AGA-AA-CCCCTTCCATATCCACA-TAACTGAC-G---ATTGATTGATTTT-TTTT-C-ATTCAG-AA-TTTTT----
gi|80345 : AAGA-AAAA-A-G-C-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-AA-AT-t
gi|80346 : AAGA-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-TTAAAG-A-T-AA-GA-T-A-AA-A
gi|80347 : AAGA-AAAA-A-G-A-CG--AAAACAGTGAAGAATTA--C-AGGCA-T-AAAG-A-T-AA--A-T-A-TA-AT-CAC-TTAA-G--CGT-CATA-GTC-TTTTAAA-----T-------CAG--TTAG-AAATT-A-T--A-A-C--ATGAAA-CCCCTTC--------CACCAACTGAC-G---A----------TT-TTT----A-TCAG-AT-TTTTT----C--C-C-GA----GTG-T-C-GAAA-AAT-TT----GA-GA-T--TTA----A--AAAC-TGA-G-ATTTTCCCAATA------TCTCA---GAA----AGTG-TACCG-AAA-TATTAG
gi|80348 : AAG-AAAA-G-G-A-TG--AAAACATTGAAGAATCAGCC-GGGCA-TTACAG-A-T-AA-GA-TCA-TA-ATTCAT-TTAA-G--CCT-CATAAGTC-TTT-AAA-----TTCTGGTTCAG--CTAA-GAATT-A-T-CA-A-C--ACA-A---CCTTTC--------CA-CAACTGAC-G---A----------TT-TTTTTC-A-TC-G-AA-TTTTTTC--C--C-C-TA----GTG-T-C-GAAT-AAT-TA----GA-TTTT--GTT----C--AAACATG--T-ATTCTTCCCAAA------T-TCAC--GAA----AGTGCT--CG-AAA-AA
gi|80349 : -AAAA-A-GCA-CGGAAAAACAGTGAAGAATTA--C-GGGCA-TTAAAG-A-T-AA-GA-T-A-TA-CTCCAT-TTAA-G--CGT-CATA-GTC--TTTAAA-----T-------CAGCATTAG-AAATT-A-T-AA-A-C--ACG-AA-C-----C--------CA-GACCCGAC-GAACA----------TT-TTCT-C-
gi|80350 : aga-AAAG-A-G-A-CG--AAAACATTGAGG--TTA--T-GGGCA-TTAAAGAA-T-AAGGA-T-ATTATAT-CAT-TTAACG--AGTCCAAC-GTCTTTTTAAAT----T-------CAA--TCGA-AGATA-ATT-AA-A-CG-AC--AA-CCCCCTC--------CA-CGACTGACTG---A----------TG-TTT--------------TTTTT----CGTA-C-AA----GTG-T---GAAATAAT-TATTTTGATAATT--CTTCA--A--AAAC-TGA-TCATTCTTCC-AAA------T-TCAGCTGAA----AGTG-TG-CG-AAATAATAAGc
gi|80351 : gaAA-G--CGT-------TC-TTTTAAA-----T-------CAG--TAAG-AAATT-A-T-TA-A-C--ACG-CA-CCCCTTC--------CA-CA
gi|80352 : AACTGAC-G---A----------TT-TTTT-C-A-TCAG-AA-TTTTT----C--CTC-AAGTACGTG-T-T-GAAA-AAT-TA----GA-GAGT--CGA----A--AAAC-T
gi|80353 : -TTTTT----CG-C-C-GA----GTG-TTC-GAAA-AAT-TA----GA-GATT--TTTAAAAA--AAAC-TGA-T-ATTTTCCAAAAAAATTTTT-TCA---GAAAAACAGTG-T--CG---A-AATTAG
gi|80354 : tttttttttttT-C-A-TCAG-AA-TTTTT----T--C-CTGA----GTG-T-C-GAAA-AAA-TA----GA-GATT--TTT----A--AAAC-TGA-T-ATTTTCCCAAAA------T-TCA---GAA----AGTG-T--CG-AAA-AATTAG