lowQualScore : 1 1 1 1 22 22 3 2 2
lowQualScore : . . . . .. .. . . .
lowQualScore : 9 9 9 9 66 66 8 0 0
consensus : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
Reference ( gi|7562 ) : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7566 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7565 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7564 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7563 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7567 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTT
gi|7575 : ATAT-GT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7568 : ATAT-AT-A-CAGAGGAGG-TACTCCCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTT
gi|7570 : ATAT-ATTA-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7569 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGTAAGTTTA
gi|7574 : ATAT-AT-A-CAGAGGAAG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAT-TGT-AGTTTA
gi|7576 : ATAT-AT-A-CAGATGATG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7571 : ATAT-AT-A-GGGAGAAGG-CACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7572 : ATAT-AT-A-CAGAGGAGG-CGCTCTCTGACTGG--TA--AGTATTAGTTAGTAC-TGT-AGTTT
gi|7573 : ATAT-TT-A-CAGAGGAGG-CGCTCTCTGACTGG--TA--AGTATTAG-TAGTAC-TGT-AGTTT
gi|7577 : ATAT-GT-A-CAGAGGAAGCTACTCTCTTGCTGG--TA--AGTAATAG-TAGTAC-TAT-AGTTTA
gi|7578 : ATAT-AT-AACAGAGAAGG-TACTCTCTGACT-G--TATTCGTACTAG-TAGTAC-TGT-AGTT
gi|7579 : ATAT-AT-G-CGGAGGAGG-TACCCTCTGACTGG--TA--AGTACTAG-
gi|7580 : ATATTAT-A-CA-AGGAG--TACTCTCTGACTGG--TA--A-TACTAGTTAGTACTTGT-AGTT
gi|7581 : ATAT-A--A-CAGAAGGAG-TAC-CTCTGACTGGTATA--GGTACTAG-TAA-AC-TGT-AATTTA
gi|7582 : ATAT-AT-A-CAGAGAAA--TACTCCTTGACTAG--TA--AGTACTAG--AGT-----T-AGTT
gi|7583 : ATAT-AT---CTGAGGAAG-AACTCGCTGACTGT--CA--AGTA-TAG-TA-TAC-TGT-AGTT
Alignments
lowQualScore : 1 1 1 1 22 22 3 1 1
lowQualScore : . . . . .. .. . . .
lowQualScore : 8 8 8 8 55 55 6 9 9
consensus : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
Reference ( family-717 ) : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7562 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7563 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7564 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7565 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7566 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7567 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTT
gi|7568 : ATAT-AT-A-CAGAGGAGG-TACTCCCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTT
gi|7569 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGTAAGTTTA
gi|7570 : ATAT-ATTA-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7571 : ATAT-AT-A-GGGAGAAGG-CACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7572 : ATAT-AT-A-CAGAGGAGG-CGCTCTCTGACTGG--TA--AGTATTAGTTAGTAC-TGT-AGTTT
gi|7573 : ATAT-TT-A-CAGAGGAGG-CGCTCTCTGACTGG--TA--AGTATTAG-TAGTAC-TGT-AGTTT
gi|7574 : ATAT-AT-A-CAGAGGAAG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAT-TGT-AGTTTA
gi|7575 : ATAT-GT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7576 : ATAT-AT-A-CAGATGATG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7577 : ATAT-GT-A-CAGAGGAAGCTACTCTCTTGCTGG--TA--AGTAATAG-TAGTAC-TAT-AGTTTA
gi|7578 : ATAT-AT-AACAGAGAAGG-TACTCTCTGACT-G--TATTCGTACTAG-TAGTAC-TGT-AGTT
gi|7579 : ATAT-AT-G-CGGAGGAGG-TACCCTCTGACTGG--TA--AGTACTAG-
gi|7580 : ATATTAT-A-CA-AGGAG--TACTCTCTGACTGG--TA--A-TACTAGTTAGTACTTGT-AGTT
gi|7581 : ATAT-A--A-CAGAAGGAG-TAC-CTCTGACTGGTATA--GGTACTAG-TAA-AC-TGT-AATTTA
gi|7582 : ATAT-AT-A-CAGAGAAA--TACTCCTTGACTAG--TA--AGTACTAG--AGT-----T-AGTT
gi|7583 : ATAT-AT---CTGAGGAAG-AACTCGCTGACTGT--CA--AGTA-TAG-TA-TAC-TGT-AGTT
Alignments
lowQualScore : 1 1 1 1 22 22 3 1 1
lowQualScore : . . . . .. .. . . .
lowQualScore : 8 8 8 8 55 55 6 9 9
consensus : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
Reference ( family-717 ) : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7562 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7563 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7564 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7565 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7566 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7567 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTT
gi|7568 : ATAT-AT-A-CAGAGGAGG-TACTCCCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTT
gi|7569 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGTAAGTTTA
gi|7570 : ATAT-ATTA-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7571 : ATAT-AT-A-GGGAGAAGG-CACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7572 : ATAT-AT-A-CAGAGGAGG-CGCTCTCTGACTGG--TA--AGTATTAGTTAGTAC-TGT-AGTTT
gi|7573 : ATAT-TT-A-CAGAGGAGG-CGCTCTCTGACTGG--TA--AGTATTAG-TAGTAC-TGT-AGTTT
gi|7574 : ATAT-AT-A-CAGAGGAAG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAT-TGT-AGTTTA
gi|7575 : ATAT-GT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7576 : ATAT-AT-A-CAGATGATG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7577 : ATAT-GT-A-CAGAGGAAGCTACTCTCTTGCTGG--TA--AGTAATAG-TAGTAC-TAT-AGTTTA
gi|7578 : ATAT-AT-AACAGAGAAGG-TACTCTCTGACT-G--TATTCGTACTAG-TAGTAC-TGT-AGTT
gi|7579 : ATAT-AT-G-CGGAGGAGG-TACCCTCTGACTGG--TA--AGTACTAG-
gi|7580 : ATATTAT-A-CA-AGGAG--TACTCTCTGACTGG--TA--A-TACTAGTTAGTACTTGT-AGTT
gi|7581 : ATAT-A--A-CAGAAGGAG-TAC-CTCTGACTGGTATA--GGTACTAG-TAA-AC-TGT-AATTTA
gi|7582 : ATAT-AT-A-CAGAGAAA--TACTCCTTGACTAG--TA--AGTACTAG--AGT-----T-AGTT
gi|7583 : ATAT-AT---CTGAGGAAG-AACTCGCTGACTGT--CA--AGTA-TAG-TA-TAC-TGT-AGTT
blockSeqs : T T A C TA TT T T A
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blockSeqCons :
originalCons : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
finalCons : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
Alignments
lowQualScore : 1 1 1 1 22 22 3 1 1
lowQualScore : . . . . .. .. . . .
lowQualScore : 8 8 8 8 55 55 6 9 9
consensus : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
Reference ( family-717 ) : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7562 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7563 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7564 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7565 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7566 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7567 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTT
gi|7568 : ATAT-AT-A-CAGAGGAGG-TACTCCCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTT
gi|7569 : ATAT-AT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGTAAGTTTA
gi|7570 : ATAT-ATTA-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7571 : ATAT-AT-A-GGGAGAAGG-CACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7572 : ATAT-AT-A-CAGAGGAGG-CGCTCTCTGACTGG--TA--AGTATTAGTTAGTAC-TGT-AGTTT
gi|7573 : ATAT-TT-A-CAGAGGAGG-CGCTCTCTGACTGG--TA--AGTATTAG-TAGTAC-TGT-AGTTT
gi|7574 : ATAT-AT-A-CAGAGGAAG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAT-TGT-AGTTTA
gi|7575 : ATAT-GT-A-CAGAGGAGG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7576 : ATAT-AT-A-CAGATGATG-TACTCTCTGACTGG--TA--AGTACTAG-TAGTAC-TGT-AGTTTA
gi|7577 : ATAT-GT-A-CAGAGGAAGCTACTCTCTTGCTGG--TA--AGTAATAG-TAGTAC-TAT-AGTTTA
gi|7578 : ATAT-AT-AACAGAGAAGG-TACTCTCTGACT-G--TATTCGTACTAG-TAGTAC-TGT-AGTT
gi|7579 : ATAT-AT-G-CGGAGGAGG-TACCCTCTGACTGG--TA--AGTACTAG-
gi|7580 : ATATTAT-A-CA-AGGAG--TACTCTCTGACTGG--TA--A-TACTAGTTAGTACTTGT-AGTT
gi|7581 : ATAT-A--A-CAGAAGGAG-TAC-CTCTGACTGGTATA--GGTACTAG-TAA-AC-TGT-AATTTA
gi|7582 : ATAT-AT-A-CAGAGAAA--TACTCCTTGACTAG--TA--AGTACTAG--AGT-----T-AGTT
gi|7583 : ATAT-AT---CTGAGGAAG-AACTCGCTGACTGT--CA--AGTA-TAG-TA-TAC-TGT-AGTT