lowQualScore : 1111 11 1111 11 3333333333 2222222222222 1 1 22222 11111 11111 1 11111 111 1 2222
lowQualScore : 888 99 8888 0 444 66666 2 55 66 6 22 6 2 2 2 4444 33 4 2 2 5555 33 00 1111111111 55 7 55 8 66 4 4 1 66 4 4 4 4 4444444444444 4 9999 66 4 66 4 8 0 5 33333 22222 22222 0 5 66 1 4 4 4 4 4 8 4 4 00000 55 4 4 3 77 444 6 3 55 5 4 4 5 4 6 2222
lowQualScore : ... .. .... . ... ..... . .. .. . .. . . . . .... .. . . . .... .. .. .......... .. . .. . .. . . . .. . . . . ............. . .... .. . .. . . . . ..... ..... ..... . . .. . . . . . . . . . ..... .. . . . .. ... . . .. . . . . . . ....
lowQualScore : 777 00 7777 5 333 22222 5 99 99 8 99 1 1 1 1 6666 22 7 4 4 0000 44 22 6666666666 55 0 66 9 11 4 4 1 11 4 4 4 4 4444444444444 4 4444 11 4 11 6 9 0 0 11111 55555 55555 0 0 99 7 4 4 0 0 0 2 0 0 00000 55 0 0 9 00 000 0 6 00 0 0 0 7 0 6 8888
consensus : TCCGTAAA--CATTCACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATGT--CCC-CCTTTCTC--CCTATTTCTGTT-AAAAGT-AAA-GAAAGA-ATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AATTTTTTCA------T--AA--CTTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AA-TATATAAC-------------G-TT----TCCATC--A-T--AGAATTAA-ATAAA-CCATCCGT---A-AATAA-----ATA-----AG-AC-AG--CTTTATATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-TGGGT--A-CGACGTTTTTT
Reference ( gi|100794 ) : TCCGTAAA--TATTCACCGTGC--GTTTATTTTCATTACGGTA--CAAA-----TACACTC-ATGT--CCG-TCTTCCTC--CCAATTTCTGTT-AAAAGT-AAA-GAAAGG-ACT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AATTTTTTCA------T--TA--CTTATAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AA-TATATAAC-------------G-TT----TCCATC--A-T--AGAATTAA-ATAAA-CCATCAGT---A-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAATGTA-TTTA--CAACCA-TATC-CCGTTTTTCAGAGACATTGAGC-TGGGT--T-CGACGTTTTTT
gi|100789 : TCCGTAAA--CATTCACCGTGC--GTTTACTTTCA-------------A-----TACACTC-ATGT--CCC-TCTTAATC--CCAATTTCTGTT-AAAAGT-AAA-GAA-----TT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AATTTTTTCA------T--AA--CTTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AA-TATATAAC-------------G-TT----TCCATCATA-T--ATAAT--A-ATAAA-CCATCCGT---A-AATAATAGATATA-----AG-AC-AG--CTTTATATCAATG-CATGCATTTAAATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAATGAAATGTAA---TGTAAGGAAAACGTA-TTTA--CAGCGA-TATC-CCGTTTTTCAGAGACATTGAGC-TGGGT--A-CGACTTTTTT
gi|100791 : TCCGTAAA--CATTCACCGT-C--GCTT--------TACGTT---CAA------TACACTC-ATGT--ACC-TCTTAATC--CCAATTTCTGTTAAAAAGT-AAA-GAAAGT-ATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AATTTTTTCA------T--AA--CTTACAACGT-CC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AA-TATATAAC-------------G-TT----TCCATC--A-T--AGAATTAA-ATGAA-CCATCCGT---G-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TT-AAT-GCCATA-----T--CAAA-GAGAAAAATGAAAG-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTCTTCAAAGACATTGAGC-TGGGG--TACGATGTTTTTT
gi|100790 : TCCGTAAA--CATTCACCGTGC--GTTTACTTC--------------AA-----TACACTC-ATGT--CCC-TCTTAATC--CCAATTTCTGTT-AAAAGT-AAA-GA-----ATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AATTTTTTCA------T--AA--CTTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTAATC--CG-CCTACTA-CAC-AA-TATATAAC-------------G-TT----TCCATC--ATT--ATAAT--A-ATAAA-CCATCCGT---A-AATTA-----ATAGATATAG-AC-AG--CTTTATATCAATG-CATGCATTT-AATAACA-A-AC--TGAAT-G-CATA-----T--CAAA-GAG-AAAATGAAAT-GAA---TGTAAGGAAAACGTA-TTTA--CAGCGA-TAT--CCGTTTTTCAGAGACAT--AGC-T-GGT--A-CGACGTTTTTT
gi|100793 : TCCGTAAA--CATTCACCGTGCA-GTTTACTT-------------CGAA-----TACAC-C-ATGT--CCC-TCT-AATC--CCAATTTCTGTT-AAAAGT-AAA-GAAATT-A-T--TGTG-ATA-AAATTA-A-----ATTTAAA--TGAATTTTTTCA------A---A--CTTACAACGTACA-AAG--TG-ATAGGTCCTT-GAGTTGT-TCGTATCC--CG-CCTACTA-CAC-AA-TATATAAC-------------G-TT----TCCATC--A-T--TAGATTAAGATAAA-CCATCCGTTAAATAATAA-----ATA-----AGGAC-AG--CTTTATATCAATG-CATGCATTT-AGTAACA-A-AC-TTAATT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAATATTGTAAGGAAAACGTA--TTA--CAACGA-TATC-CCG-TTTTCAGAGACATTGAAC-T-GGT--A-CGACATTTTTT
gi|100792 : TCCGTAAA--CATTCACCGTGCA-GTTTACTT-------------CGAA-----TACAC-C-ATGT--CCC-TCT-AATC--CCAATTTCTGTT-AAAAGT-AAA-GAAATT-A-T--TGTG-ATA-AAATTA-A-----ATTTAAA--TGAATTTTTTCA------A---A--CTTACAACGTACA-AAG--TG-ATAGGTCCTT-GAGTTGT-TCGTATCC--CG-CCTACTA-CAC-AA-TATATAAC-------------G-TT----TCCATC--A-T--TAGATTAAGATAAA-CCATCCGTTAAATAATAA-----ATA-----AGGAC-AG--CTTTATATCAATG-CATGCATTT-AGTAACA-A-AC-TTAATT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAATATTGTAAGGAAAACGTA--TTA--CAACGA-TATC-CCG-TTTTCAGAGACATTGAAC-T-GGT--A-CGACATTTTTT
gi|100795 : TCCGTGCA--CATTCACCGCGA--GTTCATTTTGAGTACAGTA--CAAA-----TACACTC-ATGTTGCC---CTTTCTC--CCTATTTCTATT-AAAAGT-AAA-GAAAGA-ACT--TGTG-ATA-AAATTG-A----TATTTAAA--TCAATTTTCTGA------T--GA--C
gi|100798 : TCCGTAAA--CATTCACAGTGC--ATTTATTTTCAGTACGGTATACAAA-----TACACTC-ATGT--CCC-CCTTTCTC--CTTATTTCTATT-AAAAGT-AAA-GAGAGA-ATT--TGTG-ATA-AACCTA-A----TATTTATA--T-TAT
gi|100800 : TCCGTAAC--CATTCACCGTGT--GTTTATTTTCAGTACGGTA--CAAA-----TGCACTC-ATGT--CCG-CCTTTCTC--CTTATTTCTATT-AAAAGT-AAA-GAAAAGTACC--TGTG-ATA-ACATTATACAGTTATTTAA
gi|100797 : TCCGTAAA--CATTCACCATGC--ATTTATTTTCAGTACGATA--CAAG-----CACATTC-ATGT--CCC-TCTTTCTC--CCTATTTCTATT---AAGT-AAA-GAAAGA-ATT--TGTG-ATA-AACTTA-A----TATTTATA--T-TAT
gi|100799 : TCCGTGCA--CATTCACCGTGA--GTTCATTTTGAGTACAGTA--CAAA-----TACACTC-ATCT--CCA-CCTTTCTC--CCTATTTCTATT-TTAAGT-AAA-GAAAGA-ACT--TGTG-ATA-AAATTA-T----TATTTAAA--T-CATTTT
gi|100796 : TCCATAAA--CATTCACCTCGC--GTTTATTTCCATTATGGTA--CATA-----TACACTC-ATGT--CCC-CCTTTTCC--CCTATTTCTTTT-AAAAGTAAAA-AAAAGA-ATT--TGTG-ATA-AAATTA-A----TATTTATA--T-TATT
gi|100802 : TCCGTAAACATATTTACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATAT--CCC-CCTTTCTC--CTTATTTCTATT------T--AA-GAAAGA-ATT--TGTG-ATA-AACTTA-A----TATTTATA--T-CAT
gi|100801 : TCCGTAAA--CATTCACCGTGC--ATTTATTTTCAGTACCGTA--CAAA-----TAAACTC-ATGT--CCC-CCTTTCTC--CCTATTTCTATG-AAAAGT-AAA-GAAAG
gi|100803 : TCCGTAAA--CATTCACCATGC--GTTTATTTTCAATACGGTA--CAAA-----TACTCTC-ATGT--CCC-CCTTTCTC--TCTATTTC--TT-AAGTGT-GAA-attgatatttatatt
gi|100804 : CCGTAAA--CATTCACTGTGCAAGTTTATTT-AATTACGGTA--CAAAATAACTACATTCCATGTT-CCGCTCTTCCTCAACAAATTCTTGTT-AAAAGT-AAAAGGAAGG-A-T--TGTGGATA-AAATTA-A----TATTTAAATTT-AAATTTTTCATGAGATT--TAACTTTACAACGTACC-A-GCTCGTATAAGTCCTTGGGGGTGTGTCGTATCCAGCGACTTACTAGCACTAATTACAT-AC-------------G-TTGTCCCCCATC--A-TCCAGA---CA-ATAAATCCATCattattgccgatagcaaat
gi|100805 : AA-----TACACTC-AT-T--CC--TCTTCCTC--A-AATTTCTGTT-AAAAGT-AAA-AGAAGA---T--TGTGGATATAAATTA-A----TATCTAA---T-AAGATTT-CA------TAATA--ACTACAA-GTACCCA-G--T--ATAAG-CCTT-GGTTTCTGT---ATCC--AG-CCTACTA-CAC-AA-TACATAAC-------------GCTT----TCCATC--A-T--AGAATTAA-AT----CCATCCGT---A-AATTA-----ATA-----AG-AC-AGAGCTTTGTATCAATGCCATGC-TTT-AATAACA-A-ACTTTGAAT-G-CAGA-----T--C-AA-CAA-AAAACGAATT-TAA---TGTAAGG-AAACGTATTTTA--CAACGATTATCTCCG-TGTTCA-AGACA-TGATCATAGGTACC-CGACGTTTTT
gi|100806 : cCNC--CCTATTTCTATT-AAAAGT-AAA-GAAAGA-ATTGATGTG-----------------TATTTGAA--T---------------------------------TAC--A-G--TG-ATACATCCTT-GGGTTGTGTTGTTTCC--CA-CTTACTA-CAT-AA-TAGATAACTCTTTCCTTAGTTG-TT----TCCTTC--A-T--AGACATAA-ATAAAACCATCCAT---A-AATAA-----ATA-----A-------------------------TGCATTT-ATTAACACA-AC-TTGAAT-G-CATAAATAAT--CCAA-GAG-AAAA-GAAAT-TAA---TGTATGGAAACCATC-TTTA--CAAC
gi|100807 : taTC--CCAATTTCTGTT-AAAAGT-AAA-GAAAGA-ATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AATTTTTTCA------T--AA--CTTACAACGTACC-A-G--TG-ATAGGTTCTT-GGTTTGTGTCATATCC--CG-CCTACTA-CAC-GA-TATATAAC-------------T-TT----TCCATC--A-T--AGAATTAA-Ag
gi|100808 : aaTC--CCTATTTCTGTT-AAAAGT-AAA-GAAAGA-AGT--TGTG-ATA-AAATTA-T----TA--TAAA--T-
gi|100809 : -AATAA------TA-----AG-ACCAG--TTTAACATCAATG-CATG-ATTT-AATAACA-ACAC-TTGAATTG-CATA-----T--CAAAAGAG-AAAATGAAAG-TAA---TGTAAGGAAAACGTA-TTTAAACAGCGA-TATC-C-GTTTTTCAGAGACATTGAGC-TGGGA--A-CGACGTTTTTT
gi|100810 : attTGTATCAATG-CATGCATTT-AATAACG-A-AC-TT-AAT-G-CATA-----TATCAAA-GA-------------------TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-TGGGT--A-CGACGTTTTTT
gi|100811 : AACA-A-AC-TT-AAT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAAC-TGGGT--A-CGACGTTTTTT
gi|100812 : AAACGTA-TTTA--CAACGA-TATC-CCGTTCTTCAAAGACATTGAGC-TGGGT--A-CGATGTTTTTT
Alignments
lowQualScore : 11111111 2222222222222 11111 11111 11111 11 111
lowQualScore : 33 88 8888 333 55555 2 3 9999999 2 2 2 2 0 55 2 2 2 4444 33 99 33 33333333 3 4 8 55 4 4 55 4 4 4 4 2222222222222 4 8888 4 55 3 55 8 8 99999 11111 11111 8 00 4 4 3 3 3 6 3 3 99999 55 3 3 2 55 222 3 44 3 3 4 3 88 55
lowQualScore : .. .. .... ... ..... . . ....... . . . . . .. . . . .... .. .. .. ........ . . . .. . . .. . . . . ............. . .... . .. . .. . . ..... ..... ..... . .. . . . . . . . . ..... .. . . . .. ... . .. . . . . .. ..
lowQualScore : 44 44 1111 555 99999 4 6 4444444 0 0 0 1 6 00 1 1 1 5555 22 00 44 99999999 6 0 0 55 0 0 55 0 0 0 0 0000000000000 0 5555 0 55 2 55 0 9 33333 11111 11111 9 66 0 0 6 6 6 5 6 6 11111 00 6 6 6 55 777 3 66 6 6 4 6 77 00
consensus : TCCGTAAACAT--TCACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATGTCCCCCTTTCTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCCGT---A-AATAA-----ATA-----AG-AC--AGCTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
Reference ( family-671 ) : TCCGTAAACAT--TCACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATGTCCCCCTTTCTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCCGT---A-AATAA-----ATA-----AG-AC--AGCTTTATATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
gi|100789 : TCCGTAAACAT--TCACCGTGC--GTTTACTTTCA-------------A-----TACACTC-ATGTCCCTCTTAATCCCA------ATTTCTGTTAAAA-GT-AAA-G-----AATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--ATA--TAATA-ATAAA-CCATCCGT---A-AATAATAGATATA-----AG-AC--AGCTTTATATCAATG-CATGCATTTAAATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAATGAAATGTAA---TGTAAGGAAAACGTA-TTTA--CAGCGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACTTTTTT
gi|100790 : TCCGTAAACAT--TCACCGTGC--GTTTACTTC--------------AA-----TACACTC-ATGTCCCTCTTAATCCCA------ATTTCTGTTAAAA-GT-------AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTAATC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCATT--ATAAT----A-ATAAA-CCATCCGT---A-AATTA-----ATAGATATAG-AC--AGCTTTATATCAATG-CATGCATTT-AATAACA-A-AC--TGAAT-G-CATA-----T--CAAA-GAG-AAAATGAAAT-GAA---TGTAAGGAAAACGTA-TTTA--CAGCGA-TAT--CCGTTTTTCAGAGACAT--AGC-T--GGTA--CGACGTTTTTT
gi|100791 : TCCGTAAACAT--TCACCGT-C--GCTT--------TACGTT---CAA------TACACTC-ATGTACCTCTTAATCCCA------ATTTCTGTTAAAAAGT-AAA-G-AAAGTATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGT-CC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATGAA-CCATCCGT---G-AATAA-----ATA-----AG-AC--AGCTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TT-AAT-GCCATA-----T--CAAA-GAGAAAAATGAAAG-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTCTTCAAAGACATTGAGC-TGGGGTA--CGATGTTTTTT
gi|100792 : TCCGTAAACAT--TCACCGTGCA-GTTTACTT-------------CGAA-----TACAC-C-ATGTCCCTCTA-ATCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAATTATT---GTG-ATA-AAATTA-A-----ATTTAAA--TGAA--TTTTTTCA--------AAC-TTACAACGTACA-AAG--TG-ATAGGTCCTT-GAGTTGT-TCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--TAGATTA--AGATAAA-CCATCCGTTAAATAATAA-----ATA-----AGGAC--AGCTTTATATCAATG-CATGCATTT-AGTAACA-A-AC-TTAATT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAATATTGTAAGGAAAACGTA--TTA--CAACGA-TATC-CCG-TTTTCAGAGACATTGAAC-T--GGTA--CGACATTTTTT
gi|100793 : TCCGTAAACAT--TCACCGTGCA-GTTTACTT-------------CGAA-----TACAC-C-ATGTCCCTCTA-ATCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAATTATT---GTG-ATA-AAATTA-A-----ATTTAAA--TGAA--TTTTTTCA--------AAC-TTACAACGTACA-AAG--TG-ATAGGTCCTT-GAGTTGT-TCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--TAGATTA--AGATAAA-CCATCCGTTAAATAATAA-----ATA-----AGGAC--AGCTTTATATCAATG-CATGCATTT-AGTAACA-A-AC-TTAATT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAATATTGTAAGGAAAACGTA--TTA--CAACGA-TATC-CCG-TTTTCAGAGACATTGAAC-T--GGTA--CGACATTTTTT
gi|100794 : TCCGTAAATAT--TCACCGTGC--GTTTATTTTCATTACGGTA--CAAA-----TACACTC-ATGTCCGTCTTCCTCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAAGGACT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TTAC-TTATAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCAGT---A-AATAA-----ATA-----AG-AC--AGCTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAATGTA-TTTA--CAACCA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTT--CGACGTTTTTT
gi|100795 : TCCGTGCACAT--TCACCGCGA--GTTCATTTTGAGTACAGTA--CAAA-----TACACTC-ATGTTGCCCTTTCTCCCT------ATTTCTATTAAAA-GT-AAA-G-AAAGAACT--TGTG-ATA-AAATTG-A----TATTTAAA--TCAA--TTTTCTGA-------TGAC-
gi|100796 : TCCATAAACAT--TCACCTCGC--GTTTATTTCCATTATGGTA--CATA-----TACACTC-ATGTCCCCCTTTTCCCCT------ATTTCTTTTAAAA-GTAAAA-A-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTATA--T-TA--TT
gi|100797 : TCCGTAAACAT--TCACCATGC--ATTTATTTTCAGTACGATA--CAAG-----CACATTC-ATGTCCCTCTTTCTCCCT------ATTTCTATT--AA-GT-AAA-G-AAAGAATT--TGTG-ATA-AACTTA-A----TATTTATA--T-TA--T
gi|100798 : TCCGTAAACAT--TCACAGTGC--ATTTATTTTCAGTACGGTATACAAA-----TACACTC-ATGTCCCCCTTTCTCCTT------ATTTCTATTAAAA-GT-AAA-G-AGAGAATT--TGTG-ATA-AACCTA-A----TATTTATA--T-TA--T
gi|100799 : TCCGTGCACAT--TCACCGTGA--GTTCATTTTGAGTACAGTA--CAAA-----TACACTC-ATCTCCACCTTTCTCCCT------ATTTCTATTTTAA-GT-AAA-G-AAAGAACT--TGTG-ATA-AAATTA-T----TATTTAAA--T-CA--TTTT
gi|100800 : TCCGTAACCAT--TCACCGTGT--GTTTATTTTCAGTACGGTA--CAAA-----TGCACTC-ATGTCCGCCTTTCTCCTT------ATTTCTATTAAAA-GT-AAA-GAAAAGTACC--TGTG-ATA-ACATTATACAGTTATTTAA
gi|100801 : TCCGTAAACAT--TCACCGTGC--ATTTATTTTCAGTACCGTA--CAAA-----TAAACTC-ATGTCCCCCTTTCTCCCT------ATTTCTATGAAAA-GT-AAA-G-AAAG-AT-----TG-AT----ATTT-A----TATT
gi|100802 : TCCGTAAACATATTTACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATATCCCCCTTTCTCCTT------ATTTCTATT------T--AA-G-AAAGAATT--TGTG-ATA-AACTTA-A----TATTTATA--T-CA--T
gi|100803 : TCCGTAAACAT--TCACCATGC--GTTTATTTTCAATACGGTA--CAAA-----TACTCTC-ATGTCCCCCTTTCTCTCT------ATTTC--TTAAGT-GT-GAA-
gi|100804 : CCGTAAACAT--TCACTGTGCAAGTTTATTT-AATTACGGTA--CAAAATAACTACATTCCATGTTCCGCT--CTTCCTCAACAAATTCTTGTTAAAA-GT-AAAAG-GAAGGATTG-TG-G-ATA-AAATTA-A----TATTTAAATTT-AA--ATTTTTCATGAGATTTAACTTTACAACGTACC-A-GCTCGTATAAGTCCTTGGGGGTGTGTCGTATCCAGCGACTTACTAGCACTAAT-TACATAC-------------G-TTGTCCCCCATCA-TCCAGA---C--A-ATAAATCCATCattattgccgatagcaaat
gi|100805 : AA-----TACACTC-AT-TCC-----TCTTCCTCAA---ATTTCTGTTAAAA-GT-AAA-A-GAAGA--T--TGTGGATATAAATTA-A----TATCTAA---T-AAGATTTCATAA-------TAAC-T-ACAA-GTACCCA-G--T--ATAAG-CCTT-GGTTTCTGT---ATCC--AG-CCTACTA-CAC-AATACATA-AC-------------GCTT----TCCATCA-T--AGAATTA--A-AT----CCATCCGT---A-AATTA-----ATA-----AG-ACAGAGCTTTGTATCAATGCCATGC-TTT-AATAACA-A-ACTTTGAAT-G-CAGA-----T--C-AA-CAA-AAAACGAATT-TAA---TGTAAGG-AAACGTATTTTA--CAACGATTATCTCCG-TGTTCA-AGACA-TGATCAT-AGGTACCCGACGTTTTT
gi|100806 : cCNCCCT------ATTTCTATTAAAA-GT-AAA-G-AAAGAATTGATGTG-----------------TATTTGAA--T---------------------------------TAC--A-G--TG-ATACATCCTT-GGGTTGTGTTGTTTCC--CA-CTTACTA-CAT-AATAGATA-ACTCTTTCCTTAGTTG-TT----TCCTTCA-T--AGACATA--A-ATAAAACCATCCAT---A-AATAA-----ATA-----A------------------------TGCATTT-ATTAACACA-AC-TTGAAT-G-CATAAATAAT--CCAA-GAG-AAAA-GAAAT-TAA---TGTATGGAAACCATC-TTTA--CAACG
gi|100807 : taTCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTTCTT-GGTTTGTGTCATATCC--CG-CCTACTA-CAC-GATATATA-AC-------------T-TT----TCCATCA-T--AGAATTA--A-A
gi|100808 : aaTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAAGT--TGTG-ATA-AAATTA-T----TA--TAAA--T-
gi|100809 : -AATAA------TA-----AG-ACC-AGTTTAACATCAATG-CATG-ATTT-AATAACA-ACAC-TTGAATTG-CATA-----T--CAAAAGAG-AAAATGAAAG-TAA---TGTAAGGAAAACGTA-TTTAAACAGCGA-TATC-C-GTTTTTCAGAGACATTGAGC-T-GGGAA--CGACGTTTTTT
gi|100810 : attTGTATCAATG-CATGCATTT-AATAACG-A-AC-TT-AAT-G-CATA-----TATCAAA-GA-------------------TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
gi|100811 : AACA-A-AC-TT-AAT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAAC-T-GGGTA--CGACGTTTTTT
gi|100812 : AAACGTA-TTTA--CAACGA-TATC-CCGTTCTTCAAAGACATTGAGC-T-GGGTA--CGATGTTTTTT
Alignments
lowQualScore : 11111111 2222222222222 11111 11111 11111 111
lowQualScore : 33 88 8888 333 55555 2 3 9999999 2 2 2 2 0 55 2 2 2 4444 33 99 33 33333333 3 4 8 55 4 4 55 4 4 4 4 2222222222222 4 8888 4 55 3 55 8 8 99999 11111 11111 8 4 66 0 4 4 3 3 3 6 3 3 99999 55 3 3 2 55 222 3 44 3 3 4 3 88 55
lowQualScore : .. .. .... ... ..... . . ....... . . . . . .. . . . .... .. .. .. ........ . . . .. . . .. . . . . ............. . .... . .. . .. . . ..... ..... ..... . . .. . . . . . . . . . ..... .. . . . .. ... . .. . . . . .. ..
lowQualScore : 44 44 1111 555 99999 4 6 4444444 0 0 0 1 6 00 1 1 1 5555 22 00 44 99999999 6 0 0 55 0 0 55 0 0 0 0 0000000000000 0 5555 0 55 2 55 0 9 33333 11111 11111 9 4 11 5 0 0 6 6 6 5 6 6 11111 00 6 6 6 55 777 3 66 6 6 4 6 77 00
consensus : TCCGTAAACAT--TCACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATGTCCCCCTTTCTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCCGT---A-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
Reference ( family-671 ) : TCCGTAAACAT--TCACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATGTCCCCCTTTCTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCCGT---A-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
gi|100789 : TCCGTAAACAT--TCACCGTGC--GTTTACTTTCA-------------A-----TACACTC-ATGTCCCTCTTAATCCCA------ATTTCTGTTAAAA-GT-AAA-G-----AATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--ATA--TAATA-ATAAA-CCATCCGT---A-AATAATAGATATA-----AG-AC-AG--CTTTATATCAATG-CATGCATTTAAATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAATGAAATGTAA---TGTAAGGAAAACGTA-TTTA--CAGCGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACTTTTTT
gi|100790 : TCCGTAAACAT--TCACCGTGC--GTTTACTTC--------------AA-----TACACTC-ATGTCCCTCTTAATCCCA------ATTTCTGTTAAAA-GT-------AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTAATC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCATT--ATAAT----A-ATAAA-CCATCCGT---A-AATTA-----ATAGATATAG-AC-AG--CTTTATATCAATG-CATGCATTT-AATAACA-A-AC--TGAAT-G-CATA-----T--CAAA-GAG-AAAATGAAAT-GAA---TGTAAGGAAAACGTA-TTTA--CAGCGA-TAT--CCGTTTTTCAGAGACAT--AGC-T--GGTA--CGACGTTTTTT
gi|100791 : TCCGTAAACAT--TCACCGT-C--GCTT--------TACGTT---CAA------TACACTC-ATGTACCTCTTAATCCCA------ATTTCTGTTAAAAAGT-AAA-G-AAAGTATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGT-CC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATGAA-CCATCCGT---G-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TT-AAT-GCCATA-----T--CAAA-GAGAAAAATGAAAG-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTCTTCAAAGACATTGAGC-TGGGGTA--CGATGTTTTTT
gi|100792 : TCCGTAAACAT--TCACCGTGCA-GTTTACTT-------------CGAA-----TACAC-C-ATGTCCCTCTA-ATCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAATTATT---GTG-ATA-AAATTA-A-----ATTTAAA--TGAA--TTTTTTCA--------AAC-TTACAACGTACA-AAG--TG-ATAGGTCCTT-GAGTTGT-TCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--TAGATTA--AGATAAA-CCATCCGTTAAATAATAA-----ATA-----AGGAC-AG--CTTTATATCAATG-CATGCATTT-AGTAACA-A-AC-TTAATT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAATATTGTAAGGAAAACGTA--TTA--CAACGA-TATC-CCG-TTTTCAGAGACATTGAAC-T--GGTA--CGACATTTTTT
gi|100793 : TCCGTAAACAT--TCACCGTGCA-GTTTACTT-------------CGAA-----TACAC-C-ATGTCCCTCTA-ATCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAATTATT---GTG-ATA-AAATTA-A-----ATTTAAA--TGAA--TTTTTTCA--------AAC-TTACAACGTACA-AAG--TG-ATAGGTCCTT-GAGTTGT-TCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--TAGATTA--AGATAAA-CCATCCGTTAAATAATAA-----ATA-----AGGAC-AG--CTTTATATCAATG-CATGCATTT-AGTAACA-A-AC-TTAATT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAATATTGTAAGGAAAACGTA--TTA--CAACGA-TATC-CCG-TTTTCAGAGACATTGAAC-T--GGTA--CGACATTTTTT
gi|100794 : TCCGTAAATAT--TCACCGTGC--GTTTATTTTCATTACGGTA--CAAA-----TACACTC-ATGTCCGTCTTCCTCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAAGGACT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TTAC-TTATAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCAGT---A-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAATGTA-TTTA--CAACCA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTT--CGACGTTTTTT
gi|100795 : TCCGTGCACAT--TCACCGCGA--GTTCATTTTGAGTACAGTA--CAAA-----TACACTC-ATGTTGCCCTTTCTCCCT------ATTTCTATTAAAA-GT-AAA-G-AAAGAACT--TGTG-ATA-AAATTG-A----TATTTAAA--TCAA--TTTTCTGA-------TGAC-
gi|100796 : TCCATAAACAT--TCACCTCGC--GTTTATTTCCATTATGGTA--CATA-----TACACTC-ATGTCCCCCTTTTCCCCT------ATTTCTTTTAAAA-GTAAAA-A-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTATA--T-TA--TT
gi|100797 : TCCGTAAACAT--TCACCATGC--ATTTATTTTCAGTACGATA--CAAG-----CACATTC-ATGTCCCTCTTTCTCCCT------ATTTCTATT--AA-GT-AAA-G-AAAGAATT--TGTG-ATA-AACTTA-A----TATTTATA--T-TA--T
gi|100798 : TCCGTAAACAT--TCACAGTGC--ATTTATTTTCAGTACGGTATACAAA-----TACACTC-ATGTCCCCCTTTCTCCTT------ATTTCTATTAAAA-GT-AAA-G-AGAGAATT--TGTG-ATA-AACCTA-A----TATTTATA--T-TA--T
gi|100799 : TCCGTGCACAT--TCACCGTGA--GTTCATTTTGAGTACAGTA--CAAA-----TACACTC-ATCTCCACCTTTCTCCCT------ATTTCTATTTTAA-GT-AAA-G-AAAGAACT--TGTG-ATA-AAATTA-T----TATTTAAA--T-CA--TTTT
gi|100800 : TCCGTAACCAT--TCACCGTGT--GTTTATTTTCAGTACGGTA--CAAA-----TGCACTC-ATGTCCGCCTTTCTCCTT------ATTTCTATTAAAA-GT-AAA-GAAAAGTACC--TGTG-ATA-ACATTATACAGTTATTTAA
gi|100801 : TCCGTAAACAT--TCACCGTGC--ATTTATTTTCAGTACCGTA--CAAA-----TAAACTC-ATGTCCCCCTTTCTCCCT------ATTTCTATGAAAA-GT-AAA-G-AAAG-AT-----TG-AT----ATTT-A----TATT
gi|100802 : TCCGTAAACATATTTACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATATCCCCCTTTCTCCTT------ATTTCTATT------T--AA-G-AAAGAATT--TGTG-ATA-AACTTA-A----TATTTATA--T-CA--T
gi|100803 : TCCGTAAACAT--TCACCATGC--GTTTATTTTCAATACGGTA--CAAA-----TACTCTC-ATGTCCCCCTTTCTCTCT------ATTTC--TTAAGT-GT-GAA-
gi|100804 : CCGTAAACAT--TCACTGTGCAAGTTTATTT-AATTACGGTA--CAAAATAACTACATTCCATGTTCCGCT--CTTCCTCAACAAATTCTTGTTAAAA-GT-AAAAG-GAAGGATTG-TG-G-ATA-AAATTA-A----TATTTAAATTT-AA--ATTTTTCATGAGATTTAACTTTACAACGTACC-A-GCTCGTATAAGTCCTTGGGGGTGTGTCGTATCCAGCGACTTACTAGCACTAAT-TACATAC-------------G-TTGTCCCCCATCA-TCCAGA---C--A-ATAAATCCATCattattgccgatagcaaat
gi|100805 : AA-----TACACTC-AT-TCC-----TCTTCCTCAA---ATTTCTGTTAAAA-GT-AAA-A-GAAGA--T--TGTGGATATAAATTA-A----TATCTAA---T-AAGATTTCATAA-------TAAC-T-ACAA-GTACCCA-G--T--ATAAG-CCTT-GGTTTCTGT---ATCC--AG-CCTACTA-CAC-AATACATA-AC-------------GCTT----TCCATCA-T--AGAATTA--A-AT----CCATCCGT---A-AATTA-----ATA-----AG-AC-AGAGCTTTGTATCAATGCCATGC-TTT-AATAACA-A-ACTTTGAAT-G-CAGA-----T--C-AA-CAA-AAAACGAATT-TAA---TGTAAGG-AAACGTATTTTA--CAACGATTATCTCCG-TGTTCA-AGACA-TGATCAT-AGGTACCCGACGTTTTT
gi|100806 : cCNCCCT------ATTTCTATTAAAA-GT-AAA-G-AAAGAATTGATGTG-----------------TATTTGAA--T---------------------------------TAC--A-G--TG-ATACATCCTT-GGGTTGTGTTGTTTCC--CA-CTTACTA-CAT-AATAGATA-ACTCTTTCCTTAGTTG-TT----TCCTTCA-T--AGACATA--A-ATAAAACCATCCAT---A-AATAA-----ATA-----A-------------------------TGCATTT-ATTAACACA-AC-TTGAAT-G-CATAAATAAT--CCAA-GAG-AAAA-GAAAT-TAA---TGTATGGAAACCATC-TTTA--CAACG
gi|100807 : taTCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTTCTT-GGTTTGTGTCATATCC--CG-CCTACTA-CAC-GATATATA-AC-------------T-TT----TCCATCA-T--AGAATTA--A-A
gi|100808 : aaTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAAGT--TGTG-ATA-AAATTA-T----TA--TAAA--T-
gi|100809 : -AATAA------TA-----AG-ACCAG--TTTAACATCAATG-CATG-ATTT-AATAACA-ACAC-TTGAATTG-CATA-----T--CAAAAGAG-AAAATGAAAG-TAA---TGTAAGGAAAACGTA-TTTAAACAGCGA-TATC-C-GTTTTTCAGAGACATTGAGC-T-GGGAA--CGACGTTTTTT
gi|100810 : attTGTATCAATG-CATGCATTT-AATAACG-A-AC-TT-AAT-G-CATA-----TATCAAA-GA-------------------TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
gi|100811 : AACA-A-AC-TT-AAT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAAC-T-GGGTA--CGACGTTTTTT
gi|100812 : AAACGTA-TTTA--CAACGA-TATC-CCGTTCTTCAAAGACATTGAGC-T-GGGTA--CGATGTTTTTT
Alignments
lowQualScore : 11111111 2222222222222 11111 11111 11111 111
lowQualScore : 33 88 8888 333 55555 2 3 9999999 2 2 2 2 0 55 2 2 2 4444 33 99 33 33333333 3 4 8 55 4 4 55 4 4 4 4 2222222222222 4 8888 4 55 3 55 8 8 99999 11111 11111 8 4 66 0 4 4 3 3 3 6 3 3 99999 55 3 3 2 55 222 3 44 3 3 4 3 88 55
lowQualScore : .. .. .... ... ..... . . ....... . . . . . .. . . . .... .. .. .. ........ . . . .. . . .. . . . . ............. . .... . .. . .. . . ..... ..... ..... . . .. . . . . . . . . . ..... .. . . . .. ... . .. . . . . .. ..
lowQualScore : 44 44 1111 555 99999 4 6 4444444 0 0 0 1 6 00 1 1 1 5555 22 00 44 99999999 6 0 0 55 0 0 55 0 0 0 0 0000000000000 0 5555 0 55 2 55 0 9 33333 11111 11111 9 4 11 5 0 0 6 6 6 5 6 6 11111 00 6 6 6 55 777 3 66 6 6 4 6 77 00
consensus : TCCGTAAACAT--TCACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATGTCCCCCTTTCTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCCGT---A-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
Reference ( family-671 ) : TCCGTAAACAT--TCACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATGTCCCCCTTTCTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCCGT---A-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
gi|100789 : TCCGTAAACAT--TCACCGTGC--GTTTACTTTCA-------------A-----TACACTC-ATGTCCCTCTTAATCCCA------ATTTCTGTTAAAA-GT-AAA-G-----AATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--ATA--TAATA-ATAAA-CCATCCGT---A-AATAATAGATATA-----AG-AC-AG--CTTTATATCAATG-CATGCATTTAAATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAATGAAATGTAA---TGTAAGGAAAACGTA-TTTA--CAGCGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACTTTTTT
gi|100790 : TCCGTAAACAT--TCACCGTGC--GTTTACTTC--------------AA-----TACACTC-ATGTCCCTCTTAATCCCA------ATTTCTGTTAAAA-GT-------AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTAATC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCATT--ATAAT----A-ATAAA-CCATCCGT---A-AATTA-----ATAGATATAG-AC-AG--CTTTATATCAATG-CATGCATTT-AATAACA-A-AC--TGAAT-G-CATA-----T--CAAA-GAG-AAAATGAAAT-GAA---TGTAAGGAAAACGTA-TTTA--CAGCGA-TAT--CCGTTTTTCAGAGACAT--AGC-T--GGTA--CGACGTTTTTT
gi|100791 : TCCGTAAACAT--TCACCGT-C--GCTT--------TACGTT---CAA------TACACTC-ATGTACCTCTTAATCCCA------ATTTCTGTTAAAAAGT-AAA-G-AAAGTATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGT-CC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATGAA-CCATCCGT---G-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TT-AAT-GCCATA-----T--CAAA-GAGAAAAATGAAAG-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTCTTCAAAGACATTGAGC-TGGGGTA--CGATGTTTTTT
gi|100792 : TCCGTAAACAT--TCACCGTGCA-GTTTACTT-------------CGAA-----TACAC-C-ATGTCCCTCTA-ATCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAATTATT---GTG-ATA-AAATTA-A-----ATTTAAA--TGAA--TTTTTTCA--------AAC-TTACAACGTACA-AAG--TG-ATAGGTCCTT-GAGTTGT-TCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--TAGATTA--AGATAAA-CCATCCGTTAAATAATAA-----ATA-----AGGAC-AG--CTTTATATCAATG-CATGCATTT-AGTAACA-A-AC-TTAATT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAATATTGTAAGGAAAACGTA--TTA--CAACGA-TATC-CCG-TTTTCAGAGACATTGAAC-T--GGTA--CGACATTTTTT
gi|100793 : TCCGTAAACAT--TCACCGTGCA-GTTTACTT-------------CGAA-----TACAC-C-ATGTCCCTCTA-ATCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAATTATT---GTG-ATA-AAATTA-A-----ATTTAAA--TGAA--TTTTTTCA--------AAC-TTACAACGTACA-AAG--TG-ATAGGTCCTT-GAGTTGT-TCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--TAGATTA--AGATAAA-CCATCCGTTAAATAATAA-----ATA-----AGGAC-AG--CTTTATATCAATG-CATGCATTT-AGTAACA-A-AC-TTAATT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAATATTGTAAGGAAAACGTA--TTA--CAACGA-TATC-CCG-TTTTCAGAGACATTGAAC-T--GGTA--CGACATTTTTT
gi|100794 : TCCGTAAATAT--TCACCGTGC--GTTTATTTTCATTACGGTA--CAAA-----TACACTC-ATGTCCGTCTTCCTCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAAGGACT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TTAC-TTATAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCAGT---A-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAATGTA-TTTA--CAACCA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTT--CGACGTTTTTT
gi|100795 : TCCGTGCACAT--TCACCGCGA--GTTCATTTTGAGTACAGTA--CAAA-----TACACTC-ATGTTGCCCTTTCTCCCT------ATTTCTATTAAAA-GT-AAA-G-AAAGAACT--TGTG-ATA-AAATTG-A----TATTTAAA--TCAA--TTTTCTGA-------TGAC-
gi|100796 : TCCATAAACAT--TCACCTCGC--GTTTATTTCCATTATGGTA--CATA-----TACACTC-ATGTCCCCCTTTTCCCCT------ATTTCTTTTAAAA-GTAAAA-A-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTATA--T-TA--TT
gi|100797 : TCCGTAAACAT--TCACCATGC--ATTTATTTTCAGTACGATA--CAAG-----CACATTC-ATGTCCCTCTTTCTCCCT------ATTTCTATT--AA-GT-AAA-G-AAAGAATT--TGTG-ATA-AACTTA-A----TATTTATA--T-TA--T
gi|100798 : TCCGTAAACAT--TCACAGTGC--ATTTATTTTCAGTACGGTATACAAA-----TACACTC-ATGTCCCCCTTTCTCCTT------ATTTCTATTAAAA-GT-AAA-G-AGAGAATT--TGTG-ATA-AACCTA-A----TATTTATA--T-TA--T
gi|100799 : TCCGTGCACAT--TCACCGTGA--GTTCATTTTGAGTACAGTA--CAAA-----TACACTC-ATCTCCACCTTTCTCCCT------ATTTCTATTTTAA-GT-AAA-G-AAAGAACT--TGTG-ATA-AAATTA-T----TATTTAAA--T-CA--TTTT
gi|100800 : TCCGTAACCAT--TCACCGTGT--GTTTATTTTCAGTACGGTA--CAAA-----TGCACTC-ATGTCCGCCTTTCTCCTT------ATTTCTATTAAAA-GT-AAA-GAAAAGTACC--TGTG-ATA-ACATTATACAGTTATTTAA
gi|100801 : TCCGTAAACAT--TCACCGTGC--ATTTATTTTCAGTACCGTA--CAAA-----TAAACTC-ATGTCCCCCTTTCTCCCT------ATTTCTATGAAAA-GT-AAA-G-AAAG-AT-----TG-AT----ATTT-A----TATT
gi|100802 : TCCGTAAACATATTTACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATATCCCCCTTTCTCCTT------ATTTCTATT------T--AA-G-AAAGAATT--TGTG-ATA-AACTTA-A----TATTTATA--T-CA--T
gi|100803 : TCCGTAAACAT--TCACCATGC--GTTTATTTTCAATACGGTA--CAAA-----TACTCTC-ATGTCCCCCTTTCTCTCT------ATTTC--TTAAGT-GT-GAA-
gi|100804 : CCGTAAACAT--TCACTGTGCAAGTTTATTT-AATTACGGTA--CAAAATAACTACATTCCATGTTCCGCT--CTTCCTCAACAAATTCTTGTTAAAA-GT-AAAAG-GAAGGATTG-TG-G-ATA-AAATTA-A----TATTTAAATTT-AA--ATTTTTCATGAGATTTAACTTTACAACGTACC-A-GCTCGTATAAGTCCTTGGGGGTGTGTCGTATCCAGCGACTTACTAGCACTAAT-TACATAC-------------G-TTGTCCCCCATCA-TCCAGA---C--A-ATAAATCCATCattattgccgatagcaaat
gi|100805 : AA-----TACACTC-AT-TCC-----TCTTCCTCAA---ATTTCTGTTAAAA-GT-AAA-A-GAAGA--T--TGTGGATATAAATTA-A----TATCTAA---T-AAGATTTCATAA-------TAAC-T-ACAA-GTACCCA-G--T--ATAAG-CCTT-GGTTTCTGT---ATCC--AG-CCTACTA-CAC-AATACATA-AC-------------GCTT----TCCATCA-T--AGAATTA--A-AT----CCATCCGT---A-AATTA-----ATA-----AG-AC-AGAGCTTTGTATCAATGCCATGC-TTT-AATAACA-A-ACTTTGAAT-G-CAGA-----T--C-AA-CAA-AAAACGAATT-TAA---TGTAAGG-AAACGTATTTTA--CAACGATTATCTCCG-TGTTCA-AGACA-TGATCAT-AGGTACCCGACGTTTTT
gi|100806 : cCNCCCT------ATTTCTATTAAAA-GT-AAA-G-AAAGAATTGATGTG-----------------TATTTGAA--T---------------------------------TAC--A-G--TG-ATACATCCTT-GGGTTGTGTTGTTTCC--CA-CTTACTA-CAT-AATAGATA-ACTCTTTCCTTAGTTG-TT----TCCTTCA-T--AGACATA--A-ATAAAACCATCCAT---A-AATAA-----ATA-----A-------------------------TGCATTT-ATTAACACA-AC-TTGAAT-G-CATAAATAAT--CCAA-GAG-AAAA-GAAAT-TAA---TGTATGGAAACCATC-TTTA--CAACG
gi|100807 : taTCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTTCTT-GGTTTGTGTCATATCC--CG-CCTACTA-CAC-GATATATA-AC-------------T-TT----TCCATCA-T--AGAATTA--A-A
gi|100808 : aaTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAAGT--TGTG-ATA-AAATTA-T----TA--TAAA--T-
gi|100809 : -AATAA------TA-----AG-ACCAG--TTTAACATCAATG-CATG-ATTT-AATAACA-ACAC-TTGAATTG-CATA-----T--CAAAAGAG-AAAATGAAAG-TAA---TGTAAGGAAAACGTA-TTTAAACAGCGA-TATC-C-GTTTTTCAGAGACATTGAGC-T-GGGAA--CGACGTTTTTT
gi|100810 : attTGTATCAATG-CATGCATTT-AATAACG-A-AC-TT-AAT-G-CATA-----TATCAAA-GA-------------------TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
gi|100811 : AACA-A-AC-TT-AAT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAAC-T-GGGTA--CGACGTTTTTT
gi|100812 : AAACGTA-TTTA--CAACGA-TATC-CCGTTCTTCAAAGACATTGAGC-T-GGGTA--CGATGTTTTTT
blockSeqs : AT AA TCAT ATA ATAAC C A TCAACAA A A A A GA G T T CAGT TT GA GA TGAGATTT T C A CT T G AG A G T T TCTTTCCTTAGTT C GTCC T CC A . G T TAAAT . GATAT G C AG C . C C T G T C AATAA AT A A T G TAT T AA T T T A GG CC
blockSeqs : . A TGAG A . . A TCAA . . . . G . . . . . GA . T . . A . . . . . . . . . . . . . A . G A TAAAT . . G . . . . . . . A . . . . . . T T TAT . . . . T . G .
blockSeqs : . A CCAT A . . C A . . . . . . . . . . CA . T . . . . . . . . . . . . . . . . A . . . A . . . . . . . . . . A . . . . . . C G . . . . . T . A .
blockSeqs : . . TCAG A . . T A . . . . . . . . . . A . T . . . . . . . . . . . . . . . . A . . . G . . . . . . . . . . G . . . . . . C G . . . . . T . G .
blockSeqs : . . TCAG A . . T A . . . . . . . . . . A . T . . . . . . . . . . . . . . . . A . . . A . . . . . . . . . . G . . . . . . C T . . . . . T . G .
blockSeqs : . . TGAG A . . T A . . . . . . . . . . A . T . . . . . . . . . . . . . . . . A . . . A . . . . . . . . . . G . . . . . . C T . . . . . T . G .
blockSeqs : . . TCAG A . . T A . . . . . . . . . . T . T . . . . . . . . . . . . . . . . C . . . A . . . . . . . . . . G . . . . . . T T . . . . . T . G .
blockSeqs : . . TCAG A . . T T . . . . . . . . . . T . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . C T . . . . . . . . .
blockSeqs : . . TCAG A . . T T . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . . . . . . .
blockSeqs : . . TCAA A . . T T . . . . . . . . . . C . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . AAT A . . T T . . . . . . . . . . C . . .
blockSeqs : . . C . . . T T . . . . . . . . . . A .
blockSeqs : . . . . . . T T . . . . . . . . . . A .
blockSeqs : . . . . . . . T . . . . . . . . . . A .
blockSeqs : . . . . . . . T . . . . . . . . . . . .
blockSeqs : . . . T . . . . . . . . . .
blockSeqs : T . . . . . . . . .
blockSeqs : A . . . . . . . . .
blockSeqs : T . . .
blockSeqCons : TCAG A** ** ***** T*
originalCons : TCCGTAAACAT--TCACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATGTCCCCCTTTCTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCCGT---A-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
finalCons : TCCGTAAACAT--TCACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATGTCCCCCTTTCTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCCGT---A-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAATT-AA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
Alignments
lowQualScore : 11111111 2222222222222 11111 11111 11111 111
lowQualScore : 33 88 8888 333 55555 2 3 9999999 2 2 2 2 0 55 2 2 2 4444 33 99 33 33333333 3 4 8 55 4 4 55 4 4 4 4 2222222222222 4 8888 4 55 3 55 8 8 99999 11111 11111 8 4 66 0 4 4 3 3 3 6 3 3 99999 55 3 3 2 55 222 3 44 3 3 4 3 88 55
lowQualScore : .. .. .... ... ..... . . ....... . . . . . .. . . . .... .. .. .. ........ . . . .. . . .. . . . . ............. . .... . .. . .. . . ..... ..... ..... . . .. . . . . . . . . . ..... .. . . . .. ... . .. . . . . .. ..
lowQualScore : 44 44 1111 555 99999 4 6 4444444 0 0 0 1 6 00 1 1 1 5555 22 00 44 99999999 6 0 0 55 0 0 55 0 0 0 0 0000000000000 0 5555 0 55 2 55 0 9 33333 11111 11111 9 4 11 5 0 0 6 6 6 5 6 6 11111 00 6 6 6 55 777 3 66 6 6 4 6 77 00
consensus : TCCGTAAACAT--TCACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATGTCCCCCTTTCTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCCGT---A-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
Reference ( family-671 ) : TCCGTAAACAT--TCACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATGTCCCCCTTTCTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCCGT---A-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
gi|100789 : TCCGTAAACAT--TCACCGTGC--GTTTACTTTCA-------------A-----TACACTC-ATGTCCCTCTTAATCCCA------ATTTCTGTTAAAA-GT-AAA-G-----AATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--ATA--TAATA-ATAAA-CCATCCGT---A-AATAATAGATATA-----AG-AC-AG--CTTTATATCAATG-CATGCATTTAAATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAATGAAATGTAA---TGTAAGGAAAACGTA-TTTA--CAGCGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACTTTTTT
gi|100790 : TCCGTAAACAT--TCACCGTGC--GTTTACTTC--------------AA-----TACACTC-ATGTCCCTCTTAATCCCA------ATTTCTGTTAAAA-GT-------AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTAATC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCATT--ATAAT----A-ATAAA-CCATCCGT---A-AATTA-----ATAGATATAG-AC-AG--CTTTATATCAATG-CATGCATTT-AATAACA-A-AC--TGAAT-G-CATA-----T--CAAA-GAG-AAAATGAAAT-GAA---TGTAAGGAAAACGTA-TTTA--CAGCGA-TAT--CCGTTTTTCAGAGACAT--AGC-T--GGTA--CGACGTTTTTT
gi|100791 : TCCGTAAACAT--TCACCGT-C--GCTT--------TACGTT---CAA------TACACTC-ATGTACCTCTTAATCCCA------ATTTCTGTTAAAAAGT-AAA-G-AAAGTATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGT-CC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATGAA-CCATCCGT---G-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TT-AAT-GCCATA-----T--CAAA-GAGAAAAATGAAAG-TAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTCTTCAAAGACATTGAGC-TGGGGTA--CGATGTTTTTT
gi|100792 : TCCGTAAACAT--TCACCGTGCA-GTTTACTT-------------CGAA-----TACAC-C-ATGTCCCTCTA-ATCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAATTATT---GTG-ATA-AAATTA-A-----ATTTAAA--TGAA--TTTTTTCA--------AAC-TTACAACGTACA-AAG--TG-ATAGGTCCTT-GAGTTGT-TCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--TAGATTA--AGATAAA-CCATCCGTTAAATAATAA-----ATA-----AGGAC-AG--CTTTATATCAATG-CATGCATTT-AGTAACA-A-AC-TTAATT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAATATTGTAAGGAAAACGTA--TTA--CAACGA-TATC-CCG-TTTTCAGAGACATTGAAC-T--GGTA--CGACATTTTTT
gi|100793 : TCCGTAAACAT--TCACCGTGCA-GTTTACTT-------------CGAA-----TACAC-C-ATGTCCCTCTA-ATCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAATTATT---GTG-ATA-AAATTA-A-----ATTTAAA--TGAA--TTTTTTCA--------AAC-TTACAACGTACA-AAG--TG-ATAGGTCCTT-GAGTTGT-TCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--TAGATTA--AGATAAA-CCATCCGTTAAATAATAA-----ATA-----AGGAC-AG--CTTTATATCAATG-CATGCATTT-AGTAACA-A-AC-TTAATT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAATATTGTAAGGAAAACGTA--TTA--CAACGA-TATC-CCG-TTTTCAGAGACATTGAAC-T--GGTA--CGACATTTTTT
gi|100794 : TCCGTAAATAT--TCACCGTGC--GTTTATTTTCATTACGGTA--CAAA-----TACACTC-ATGTCCGTCTTCCTCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAAGGACT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TTAC-TTATAACGTACC-A-G--TG-ATAGGTCCTT-GGGTTGTGTCGTATCC--CG-CCTACTA-CAC-AATATATA-AC-------------G-TT----TCCATCA-T--AGAATTA--A-ATAAA-CCATCAGT---A-AATAA-----ATA-----AG-AC-AG--CTTTGTATCAATG-CATGCATTT-AATAACA-A-AC-TTGAAT-G-CATA-----T--CAAA-GAG-AAAACGAAAT-TAA---TGTAAGGAAAATGTA-TTTA--CAACCA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTT--CGACGTTTTTT
gi|100795 : TCCGTGCACAT--TCACCGCGA--GTTCATTTTGAGTACAGTA--CAAA-----TACACTC-ATGTTGCCCTTTCTCCCT------ATTTCTATTAAAA-GT-AAA-G-AAAGAACT--TGTG-ATA-AAATTG-A----TATTTAAA--TCAA--TTTTCTGA-------TGAC-
gi|100796 : TCCATAAACAT--TCACCTCGC--GTTTATTTCCATTATGGTA--CATA-----TACACTC-ATGTCCCCCTTTTCCCCT------ATTTCTTTTAAAA-GTAAAA-A-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTATA--T-TA--TT
gi|100797 : TCCGTAAACAT--TCACCATGC--ATTTATTTTCAGTACGATA--CAAG-----CACATTC-ATGTCCCTCTTTCTCCCT------ATTTCTATT--AA-GT-AAA-G-AAAGAATT--TGTG-ATA-AACTTA-A----TATTTATA--T-TA--T
gi|100798 : TCCGTAAACAT--TCACAGTGC--ATTTATTTTCAGTACGGTATACAAA-----TACACTC-ATGTCCCCCTTTCTCCTT------ATTTCTATTAAAA-GT-AAA-G-AGAGAATT--TGTG-ATA-AACCTA-A----TATTTATA--T-TA--T
gi|100799 : TCCGTGCACAT--TCACCGTGA--GTTCATTTTGAGTACAGTA--CAAA-----TACACTC-ATCTCCACCTTTCTCCCT------ATTTCTATTTTAA-GT-AAA-G-AAAGAACT--TGTG-ATA-AAATTA-T----TATTTAAA--T-CA--TTTT
gi|100800 : TCCGTAACCAT--TCACCGTGT--GTTTATTTTCAGTACGGTA--CAAA-----TGCACTC-ATGTCCGCCTTTCTCCTT------ATTTCTATTAAAA-GT-AAA-GAAAAGTACC--TGTG-ATA-ACATTATACAGTTATTTAA
gi|100801 : TCCGTAAACAT--TCACCGTGC--ATTTATTTTCAGTACCGTA--CAAA-----TAAACTC-ATGTCCCCCTTTCTCCCT------ATTTCTATGAAAA-GT-AAA-G-AAAG-AT-----TG-AT----ATTT-A----TATT
gi|100802 : TCCGTAAACATATTTACCGTGC--GTTTATTTTCAGTACGGTA--CAAA-----TACACTC-ATATCCCCCTTTCTCCTT------ATTTCTATT------T--AA-G-AAAGAATT--TGTG-ATA-AACTTA-A----TATTTATA--T-CA--T
gi|100803 : TCCGTAAACAT--TCACCATGC--GTTTATTTTCAATACGGTA--CAAA-----TACTCTC-ATGTCCCCCTTTCTCTCT------ATTTC--TTAAGT-GT-GAA-
gi|100804 : CCGTAAACAT--TCACTGTGCAAGTTTATTT-AATTACGGTA--CAAAATAACTACATTCCATGTTCCGCT--CTTCCTCAACAAATTCTTGTTAAAA-GT-AAAAG-GAAGGATTG-TG-G-ATA-AAATTA-A----TATTTAAATTT-AA--ATTTTTCATGAGATTTAACTTTACAACGTACC-A-GCTCGTATAAGTCCTTGGGGGTGTGTCGTATCCAGCGACTTACTAGCACTAAT-TACATAC-------------G-TTGTCCCCCATCA-TCCAGA---C--A-ATAAATCCATCattattgccgatagcaaat
gi|100805 : AA-----TACACTC-AT-TCC-----TCTTCCTCAA---ATTTCTGTTAAAA-GT-AAA-A-GAAGA--T--TGTGGATATAAATTA-A----TATCTAA---T-AAGATTTCATAA-------TAAC-T-ACAA-GTACCCA-G--T--ATAAG-CCTT-GGTTTCTGT---ATCC--AG-CCTACTA-CAC-AATACATA-AC-------------GCTT----TCCATCA-T--AGAATTA--A-AT----CCATCCGT---A-AATTA-----ATA-----AG-AC-AGAGCTTTGTATCAATGCCATGC-TTT-AATAACA-A-ACTTTGAAT-G-CAGA-----T--C-AA-CAA-AAAACGAATT-TAA---TGTAAGG-AAACGTATTTTA--CAACGATTATCTCCG-TGTTCA-AGACA-TGATCAT-AGGTACCCGACGTTTTT
gi|100806 : cCNCCCT------ATTTCTATTAAAA-GT-AAA-G-AAAGAATTGATGTG-----------------TATTTGAA--T---------------------------------TAC--A-G--TG-ATACATCCTT-GGGTTGTGTTGTTTCC--CA-CTTACTA-CAT-AATAGATA-ACTCTTTCCTTAGTTG-TT----TCCTTCA-T--AGACATA--A-ATAAAACCATCCAT---A-AATAA-----ATA-----A-------------------------TGCATTT-ATTAACACA-AC-TTGAAT-G-CATAAATAAT--CCAA-GAG-AAAA-GAAAT-TAA---TGTATGGAAACCATC-TTTA--CAACG
gi|100807 : taTCCCA------ATTTCTGTTAAAA-GT-AAA-G-AAAGAATT--TGTG-ATA-AAATTA-A----TATTTAAA--T-AA--TTTTTTCA-------TAAC-TTACAACGTACC-A-G--TG-ATAGGTTCTT-GGTTTGTGTCATATCC--CG-CCTACTA-CAC-GATATATA-AC-------------T-TT----TCCATCA-T--AGAATTA--A-A
gi|100808 : aaTCCCT------ATTTCTGTTAAAA-GT-AAA-G-AAAGAAGT--TGTG-ATA-AAATTA-T----TA--TAAA--T-
gi|100809 : -AATAA------TA-----AG-ACCAG--TTTAACATCAATG-CATG-ATTT-AATAACA-ACAC-TTGAATTG-CATA-----T--CAAAAGAG-AAAATGAAAG-TAA---TGTAAGGAAAACGTA-TTTAAACAGCGA-TATC-C-GTTTTTCAGAGACATTGAGC-T-GGGAA--CGACGTTTTTT
gi|100810 : attTGTATCAATG-CATGCATTT-AATAACG-A-AC-TT-AAT-G-CATA-----TATCAAA-GA-------------------TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAGC-T-GGGTA--CGACGTTTTTT
gi|100811 : AACA-A-AC-TT-AAT-G-CATA-----T--AAAA-GAG-AAAACGAAAT-GAA---TGTAAGGAAAACGTA-TTTA--CAACGA-TATC-CCGTTTTTCAGAGACATTGAAC-T-GGGTA--CGACGTTTTTT
gi|100812 : AAACGTA-TTTA--CAACGA-TATC-CCGTTCTTCAAAGACATTGAGC-T-GGGTA--CGATGTTTTTT