lowQualScore : 1
lowQualScore : 5 22 1 1 22 1 3 9
lowQualScore : . .. . . .. . . .
lowQualScore : 4 66 3 7 33 7 3 3
consensus : CCAGCCGAAGTTTAA--CAAGACAAGAGATAATCATC-GTC--T-TTGGG-GGATTTCGGGAAGAA
Reference ( gi|94210 ) : CCAGCTTAAGTTTAA--CAAGACAAAAGATAATCATC-GTC--T-TTGGG-GTATTTCGGGAAGAA
gi|94211 : CCAGCTGAAGTCTAT--CAAGACAAAAGATAATCATC-GTC--T-TTGGG-GGATTTCGGGGAGAA
gi|94212 : CCAGCTGAAATTTAA--CAAGACAAAATATAATCATC-GTC--T-TTGGG-GGGTTTGGGGAAGAA
gi|94213 : CCAGCTGAAGTTTAA--CGAGACAAAAGGTAATCATC-GTC--T-TTGGG-CGATTTCAGACAGAA
gi|94217 : CCAGCCGAAGTTAAA--CAAGACAAGAGATAATCATC-GTC--TGTGGGG-GTATTTCGGG
gi|94216 : CCAGCTGAAGTTTAA--CAAGACAAAAGATAATCTTT-GTCTTT-TTGGG-G-ATTTTGGGTAGAA
gi|94215 : CCAGCTGAAGTTTAA--CTAGACAAAAGATTATCATTGGTC--T-TTTGG-GGATTTCGGGGAGAA
gi|94219 : CCAGCCAAAGTTTAA--CAAGACAAGATATAATCATC-GTC--T-TTGGT-GGATTTTAGGAGAAA
gi|94221 : CCACCTGAAATTTAA--CAAGACAAGAAATCGTCATC-GTC--T-TTGGG-GTATTTTAGGA
gi|94218 : CTAGCCAAACTTTAA--CAAGACAAGAGATACTCATC-GTC--T-TTGGG-GAATTTT--GAAGAA
gi|94214 : CCAGCCGAACTTTAA--CAAGACAAGAGATATTCATC-GTC--T-TTGGT-GAATTTCG
gi|94222 : CCACCTGAAGTTTAA--CAAGACAAGAGATCTTCATC-GT---T-TTGGGCGTATTTTAGGAGAAA
gi|94226 : CCAGCCAAAGTTTAA--CAAGATAGA-GTTAATAATC-GTT--T-CTGGG-GTATTTTAGGAGAAA
gi|94224 : CCACCTGAAGTTTAA--CA-GACAAGAGATCTTCATC-GTC--T-TT-GG-GTATTT---GAAGA
gi|94225 : CCAGCCAAAGTATAA--CAAGATAT----TAACCATC-GTC--T-TTGGG-GGGTTTTAGGAGAAA
gi|94227 : CAGTCGAAGTTTAA--CAAGACAAGAGATAATGATC-GTC--T-TTGGT-ATATCTCGGG
gi|94228 : CAACTGAAGTATAA--CAA-ATAAAAGATAATTATC-ATC--T-TAGGG-G-ATTTCGAGGAGAA
gi|94229 : CTGAAGTTTAA--CAAGACAAAAGATATCCATT-GCC--T-TTGAG-GGATTTCGGGTAGAA
gi|94230 : CTGAAGTTTAA--CAAGACAAGAGATTTTCATC-GTA--T-TTGGGCGTATTTTAGAAAGAA
gi|94231 : CTGAAGTTTAAACCAAGACAAGAGATCTTCATC-GTA--T-TTGGC-GTATTTTAGGAA
gi|94232 : AAGTTTAA--CAAGACAAGAGATTTTCATC-GTC--T-TTGGG-AGATTTTAGGA
gi|94223 : TTTAA--CAAAACAAAAGTTATGTATC-GTA--T-TTGGC-GAATTTCGGGGAGAA
gi|94220 : ctaactgataAAGACAAAAGATAATCATC-GTC--T-TTGGG-TGATTTCGGGGAGAA
gi|94233 : ccagctgAGACAAAAGAAAATCATC-GTG--T-TTGAG-GGATTTCGGGGGGAA
gi|94234 : AAAAGATAATCATC-GTC--T-TTGGG-GGATTTCGGGGAGAA
Alignments
lowQualScore : 0 22 0 1 1 3 1
lowQualScore : . .. . . . . .
lowQualScore : 7 55 9 6 6 2 6
consensus : CCAGCCGAAGTTTAA--CAAGACAAGAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGAAGAA
Reference ( family-644 ) : CCAGCCGAAGTTTAA--CAAGACAAGAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGAAGAA
gi|94210 : CCAGCTTAAGTTTAA--CAAGACAAAAGATAATCATC-GTC-TTTGGG-GT-ATTTCGGGAAGAA
gi|94211 : CCAGCTGAAGTCTAT--CAAGACAAAAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGGAGAA
gi|94212 : CCAGCTGAAATTTAA--CAAGACAAAATATAATCATC-GTC-TTTGGG-GG-GTTTGGGGAAGAA
gi|94213 : CCAGCTGAAGTTTAA--CGAGACAAAAGGTAATCATC-GTC-TTTGGG-CG-ATTTCAGACAGAA
gi|94214 : CCAGCCGAACTTTAA--CAAGACAAGAGATATTCATC-GTC-TTTGGT-GA-ATTTCG
gi|94215 : CCAGCTGAAGTTTAA--CTAGACAAAAGATTATCATTGGTC-TTTTGG-GG-ATTTCGGGGAGAA
gi|94216 : CCAGCTGAAGTTTAA--CAAGACAAAAGATAATCTTT-GTCTTTTTGG-GG-ATTTTGGGTAGAA
gi|94217 : CCAGCCGAAGTTAAA--CAAGACAAGAGATAATCATC-GTC-TGTGGG-GGTATTTCGGG
gi|94218 : CTAGCCAAACTTTAA--CAAGACAAGAGATACTCATC-GTC-TTTGGG-GA-ATTTT--GAAGAA
gi|94219 : CCAGCCAAAGTTTAA--CAAGACAAGATATAATCATC-GTC-TTTGGT-GG-ATTTTAGGAGAAA
gi|94220 : AAGACAAAAGATAATCATC-GTC-TTTGGG-TG-ATTTCGGGGAGAA
gi|94221 : ccagctgCCACCTGAAATTTAA--CAAGACAAGAAATCGTCATC-GTC-TTTGGG-GT-ATTTTAGGA
gi|94222 : CCACCTGAAGTTTAA--CAAGACAAGAGATCTTCATC-GT--TTTGGGCGT-ATTTTAGGAGAAA
gi|94223 : CTAACTGATATTTAA--CAAAACAAAAGTTATGTATC-GTA-TTTGGC-GA-ATTTCGGGGAGAA
gi|94224 : CCACCTGAAGTTTAA--CA-GACAAGAGATCTTCATC-GTC-TTT-GG-GT-ATTT---GAAGA
gi|94225 : CCAGCCAAAGTATAA--CAAGATAT----TAACCATC-GTC-TTTGGG-GG-GTTTTAGGAGAAA
gi|94226 : CCAGCCAAAGTTTAA--CAAGAT-AGAGTTAATAATC-GTT-TCTGGG-GT-ATTTTAGGAGAAA
gi|94227 : CAGTCGAAGTTTAA--CAAGACAAGAGATAATGATC-GTC-TTTGGT-AT-ATCTCGGG
gi|94228 : CAACTGAAGTATAA--CAA-ATAAAAGATAATTATC-ATC--TTAGG-GG-ATTTCGAGGAGAA
gi|94229 : CTGAAGTTTAA--CAAGACAAAAGATATCCATT-GCC-TTTGAG-GG-ATTTCGGGTAGAA
gi|94230 : CTGAAGTTTAA--CAAGACAAGAGATTTTCATC-GTA-TTTGGGCGT-ATTTTAGAAAGAA
gi|94231 : CTGAAGTTTAAACCAAGACAAGAGATCTTCATC-GTA-TTTGGC-GT-ATTTTAGGAA
gi|94232 : AAGTTTAA--CAAGACAAGAGATTTTCATC-GTC-TTTGGG-AG-ATTTTAGGA
gi|94233 : AGACAAAAGAAAATCATC-GTG-TTTGAG-GG-ATTTCGGGGGGAA
gi|94234 : AAAAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGGAGAA
Alignments
lowQualScore : 0 22 0 1 1 3 1
lowQualScore : . .. . . . . .
lowQualScore : 7 55 9 6 6 2 6
consensus : CCAGCCGAAGTTTAA--CAAGACAAGAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGAAGAA
Reference ( family-644 ) : CCAGCCGAAGTTTAA--CAAGACAAGAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGAAGAA
gi|94210 : CCAGCTTAAGTTTAA--CAAGACAAAAGATAATCATC-GTC-TTTGGG-GT-ATTTCGGGAAGAA
gi|94211 : CCAGCTGAAGTCTAT--CAAGACAAAAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGGAGAA
gi|94212 : CCAGCTGAAATTTAA--CAAGACAAAATATAATCATC-GTC-TTTGGG-GG-GTTTGGGGAAGAA
gi|94213 : CCAGCTGAAGTTTAA--CGAGACAAAAGGTAATCATC-GTC-TTTGGG-CG-ATTTCAGACAGAA
gi|94214 : CCAGCCGAACTTTAA--CAAGACAAGAGATATTCATC-GTC-TTTGGT-GA-ATTTCG
gi|94215 : CCAGCTGAAGTTTAA--CTAGACAAAAGATTATCATTGGTC-TTTTGG-GG-ATTTCGGGGAGAA
gi|94216 : CCAGCTGAAGTTTAA--CAAGACAAAAGATAATCTTT-GTCTTTTTGG-GG-ATTTTGGGTAGAA
gi|94217 : CCAGCCGAAGTTAAA--CAAGACAAGAGATAATCATC-GTC-TGTGGG-GGTATTTCGGG
gi|94218 : CTAGCCAAACTTTAA--CAAGACAAGAGATACTCATC-GTC-TTTGGG-GA-ATTTT--GAAGAA
gi|94219 : CCAGCCAAAGTTTAA--CAAGACAAGATATAATCATC-GTC-TTTGGT-GG-ATTTTAGGAGAAA
gi|94220 : AAGACAAAAGATAATCATC-GTC-TTTGGG-TG-ATTTCGGGGAGAA
gi|94221 : ccagctgCCACCTGAAATTTAA--CAAGACAAGAAATCGTCATC-GTC-TTTGGG-GT-ATTTTAGGA
gi|94222 : CCACCTGAAGTTTAA--CAAGACAAGAGATCTTCATC-GT--TTTGGGCGT-ATTTTAGGAGAAA
gi|94223 : CTAACTGATATTTAA--CAAAACAAAAGTTATGTATC-GTA-TTTGGC-GA-ATTTCGGGGAGAA
gi|94224 : CCACCTGAAGTTTAA--CA-GACAAGAGATCTTCATC-GTC-TTT-GG-GT-ATTT---GAAGA
gi|94225 : CCAGCCAAAGTATAA--CAAGATAT----TAACCATC-GTC-TTTGGG-GG-GTTTTAGGAGAAA
gi|94226 : CCAGCCAAAGTTTAA--CAAGAT-AGAGTTAATAATC-GTT-TCTGGG-GT-ATTTTAGGAGAAA
gi|94227 : CAGTCGAAGTTTAA--CAAGACAAGAGATAATGATC-GTC-TTTGGT-AT-ATCTCGGG
gi|94228 : CAACTGAAGTATAA--CAA-ATAAAAGATAATTATC-ATC--TTAGG-GG-ATTTCGAGGAGAA
gi|94229 : CTGAAGTTTAA--CAAGACAAAAGATATCCATT-GCC-TTTGAG-GG-ATTTCGGGTAGAA
gi|94230 : CTGAAGTTTAA--CAAGACAAGAGATTTTCATC-GTA-TTTGGGCGT-ATTTTAGAAAGAA
gi|94231 : CTGAAGTTTAAACCAAGACAAGAGATCTTCATC-GTA-TTTGGC-GT-ATTTTAGGAA
gi|94232 : AAGTTTAA--CAAGACAAGAGATTTTCATC-GTC-TTTGGG-AG-ATTTTAGGA
gi|94233 : AGACAAAAGAAAATCATC-GTG-TTTGAG-GG-ATTTCGGGGGGAA
gi|94234 : AAAAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGGAGAA
blockSeqs : AC G T C T
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blockSeqCons :
originalCons : CCAGCCGAAGTTTAA--CAAGACAAGAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGAAGAA
finalCons : CCAGCCGAAGTTTAA--CAAGACAAGAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGAAGAA
Alignments
lowQualScore : 0 22 0 1 1 3 1
lowQualScore : . .. . . . . .
lowQualScore : 7 55 9 6 6 2 6
consensus : CCAGCCGAAGTTTAA--CAAGACAAGAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGAAGAA
Reference ( family-644 ) : CCAGCCGAAGTTTAA--CAAGACAAGAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGAAGAA
gi|94210 : CCAGCTTAAGTTTAA--CAAGACAAAAGATAATCATC-GTC-TTTGGG-GT-ATTTCGGGAAGAA
gi|94211 : CCAGCTGAAGTCTAT--CAAGACAAAAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGGAGAA
gi|94212 : CCAGCTGAAATTTAA--CAAGACAAAATATAATCATC-GTC-TTTGGG-GG-GTTTGGGGAAGAA
gi|94213 : CCAGCTGAAGTTTAA--CGAGACAAAAGGTAATCATC-GTC-TTTGGG-CG-ATTTCAGACAGAA
gi|94214 : CCAGCCGAACTTTAA--CAAGACAAGAGATATTCATC-GTC-TTTGGT-GA-ATTTCG
gi|94215 : CCAGCTGAAGTTTAA--CTAGACAAAAGATTATCATTGGTC-TTTTGG-GG-ATTTCGGGGAGAA
gi|94216 : CCAGCTGAAGTTTAA--CAAGACAAAAGATAATCTTT-GTCTTTTTGG-GG-ATTTTGGGTAGAA
gi|94217 : CCAGCCGAAGTTAAA--CAAGACAAGAGATAATCATC-GTC-TGTGGG-GGTATTTCGGG
gi|94218 : CTAGCCAAACTTTAA--CAAGACAAGAGATACTCATC-GTC-TTTGGG-GA-ATTTT--GAAGAA
gi|94219 : CCAGCCAAAGTTTAA--CAAGACAAGATATAATCATC-GTC-TTTGGT-GG-ATTTTAGGAGAAA
gi|94220 : AAGACAAAAGATAATCATC-GTC-TTTGGG-TG-ATTTCGGGGAGAA
gi|94221 : ccagctgCCACCTGAAATTTAA--CAAGACAAGAAATCGTCATC-GTC-TTTGGG-GT-ATTTTAGGA
gi|94222 : CCACCTGAAGTTTAA--CAAGACAAGAGATCTTCATC-GT--TTTGGGCGT-ATTTTAGGAGAAA
gi|94223 : CTAACTGATATTTAA--CAAAACAAAAGTTATGTATC-GTA-TTTGGC-GA-ATTTCGGGGAGAA
gi|94224 : CCACCTGAAGTTTAA--CA-GACAAGAGATCTTCATC-GTC-TTT-GG-GT-ATTT---GAAGA
gi|94225 : CCAGCCAAAGTATAA--CAAGATAT----TAACCATC-GTC-TTTGGG-GG-GTTTTAGGAGAAA
gi|94226 : CCAGCCAAAGTTTAA--CAAGAT-AGAGTTAATAATC-GTT-TCTGGG-GT-ATTTTAGGAGAAA
gi|94227 : CAGTCGAAGTTTAA--CAAGACAAGAGATAATGATC-GTC-TTTGGT-AT-ATCTCGGG
gi|94228 : CAACTGAAGTATAA--CAA-ATAAAAGATAATTATC-ATC--TTAGG-GG-ATTTCGAGGAGAA
gi|94229 : CTGAAGTTTAA--CAAGACAAAAGATATCCATT-GCC-TTTGAG-GG-ATTTCGGGTAGAA
gi|94230 : CTGAAGTTTAA--CAAGACAAGAGATTTTCATC-GTA-TTTGGGCGT-ATTTTAGAAAGAA
gi|94231 : CTGAAGTTTAAACCAAGACAAGAGATCTTCATC-GTA-TTTGGC-GT-ATTTTAGGAA
gi|94232 : AAGTTTAA--CAAGACAAGAGATTTTCATC-GTC-TTTGGG-AG-ATTTTAGGA
gi|94233 : AGACAAAAGAAAATCATC-GTG-TTTGAG-GG-ATTTCGGGGGGAA
gi|94234 : AAAAGATAATCATC-GTC-TTTGGG-GG-ATTTCGGGGAGAA