lowQualScore : 1 1 1 22 1
lowQualScore : . . . .. .
lowQualScore : 9 9 9 11 5
consensus : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
Reference ( gi|61128 ) : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61129 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61130 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCTGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61132 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--GAGCA-TGCTGGAGTA
gi|61133 : CGCGGC-GCC-A-AGTCAAAAGTATCTTGCCGTGAACCTC--TGGCA-TGCTGGAGTA
gi|61134 : CGTGGC-GCC-A-AGTCAAAAGTATCTCGCCATGAACCTC--TAGCA-TGCTGGAGTA
gi|61136 : CGCGGC-GCC-A-AGACAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGGGTA
gi|61137 : CGCGGC-CCC-A-AGTCAAAGGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGT
gi|61138 : CGCGGC-GAC-A-ATTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61140 : CACAGC-GCC-A-AGTCAAAAGTATCTCGCAGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61139 : CGCAGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--AAGCA-TGCTGGAGCA
gi|61141 : CGTGGC-GCC-A-AGTCAAAGGTATCTTGCCGTGAACCTT--TAGCA-TGCTGGAGT
gi|61135 : CGTGGT-GCC-A-AGTCAAAAGTATCTCACGGTGAACCTC--TAGCA-TGTTGGAGTA
gi|61131 : CGCGGC-GCC-A-AGTCAAAAGTCACTC-CTGTGAACCTC--AGGCA-T-CTGGAGT
gi|61142 : CGCGGCAGCC-ACAGTCCAAA-TATCTAGC-GTGAACCTC--TAGCA-TGCTGGATTA
gi|61143 : CGCGGC-GCCTA-AGT-ACATGTGTCTTTCCGTGAACCTCTATAGCA-TGCTGGGGTA
gi|61144 : GTGGC-GCC-A-AGTCAAAATTATCTCGCTGTGAACCTC--TAACA-TGCTGGAGTA
gi|61145 : CGGC-ACA-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCC-TGCTGGAGTA
gi|61146 : CAGC-ATC-A-AGTCAAAAGTATCTCGCTGCGAGTCCC--TAGCA-TGCTGGAGTA
gi|61147 : GC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61148 : GC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTA--TAGCA-TGCTGGAGTA
gi|61149 : C-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61150 : GTCAAA-GTATCTCGC-GTGAACCTC--TAGCATTGATGGAGT
gi|61151 : AAAGTATCTCGCCGTGAACCTC--TAGCA-TGCGAGAGTA
gi|61152 : AATATCTCGCTGTGAACCTC--TGGCA-TGCTGGAGTA
gi|61153 : TCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61154 : GCCGTGAACCTC--TAGCA-TGCTGGAGTA
Alignments
lowQualScore : 1 1 1 22 1
lowQualScore : . . . .. .
lowQualScore : 8 8 8 00 5
consensus : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
Reference ( family-601 ) : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61128 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61129 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61130 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCTGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61131 : CGCGGC-GCC-A-AGTCAAAAGTCACTC-CTGTGAACCTC--AGGCA-T-CTGGAGT
gi|61132 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--GAGCA-TGCTGGAGTA
gi|61133 : CGCGGC-GCC-A-AGTCAAAAGTATCTTGCCGTGAACCTC--TGGCA-TGCTGGAGTA
gi|61134 : CGTGGC-GCC-A-AGTCAAAAGTATCTCGCCATGAACCTC--TAGCA-TGCTGGAGTA
gi|61135 : CGTGGT-GCC-A-AGTCAAAAGTATCTCACGGTGAACCTC--TAGCA-TGTTGGAGTA
gi|61136 : CGCGGC-GCC-A-AGACAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGGGTA
gi|61137 : CGCGGC-CCC-A-AGTCAAAGGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGT
gi|61138 : CGCGGC-GAC-A-ATTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61139 : CGCAGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--AAGCA-TGCTGGAGCA
gi|61140 : CACAGC-GCC-A-AGTCAAAAGTATCTCGCAGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61141 : CGTGGC-GCC-A-AGTCAAAGGTATCTTGCCGTGAACCTT--TAGCA-TGCTGGAGT
gi|61142 : CGCGGCAGCC-ACAGTCCAAA-TATCTAGC-GTGAACCTC--TAGCA-TGCTGGATTA
gi|61143 : CGCGGC-GCCTA-AGT-ACATGTGTCTTTCCGTGAACCTCTATAGCA-TGCTGGGGTA
gi|61144 : GTGGC-GCC-A-AGTCAAAATTATCTCGCTGTGAACCTC--TAACA-TGCTGGAGTA
gi|61145 : CGGC-ACA-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCC-TGCTGGAGTA
gi|61146 : CAGC-ATC-A-AGTCAAAAGTATCTCGCTGCGAGTCCC--TAGCA-TGCTGGAGTA
gi|61147 : GC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61148 : GC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTA--TAGCA-TGCTGGAGTA
gi|61149 : C-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61150 : GTCAAA-GTATCTCGC-GTGAACCTC--TAGCATTGATGGAGT
gi|61151 : AAAGTATCTCGCCGTGAACCTC--TAGCA-TGCGAGAGTA
gi|61152 : AATATCTCGCTGTGAACCTC--TGGCA-TGCTGGAGTA
gi|61153 : TCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61154 : GCCGTGAACCTC--TAGCA-TGCTGGAGTA
Alignments
lowQualScore : 1 1 1 22 1
lowQualScore : . . . .. .
lowQualScore : 8 8 8 00 5
consensus : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
Reference ( family-601 ) : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61128 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61129 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61130 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCTGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61131 : CGCGGC-GCC-A-AGTCAAAAGTCACTC-CTGTGAACCTC--AGGCA-T-CTGGAGT
gi|61132 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--GAGCA-TGCTGGAGTA
gi|61133 : CGCGGC-GCC-A-AGTCAAAAGTATCTTGCCGTGAACCTC--TGGCA-TGCTGGAGTA
gi|61134 : CGTGGC-GCC-A-AGTCAAAAGTATCTCGCCATGAACCTC--TAGCA-TGCTGGAGTA
gi|61135 : CGTGGT-GCC-A-AGTCAAAAGTATCTCACGGTGAACCTC--TAGCA-TGTTGGAGTA
gi|61136 : CGCGGC-GCC-A-AGACAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGGGTA
gi|61137 : CGCGGC-CCC-A-AGTCAAAGGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGT
gi|61138 : CGCGGC-GAC-A-ATTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61139 : CGCAGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--AAGCA-TGCTGGAGCA
gi|61140 : CACAGC-GCC-A-AGTCAAAAGTATCTCGCAGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61141 : CGTGGC-GCC-A-AGTCAAAGGTATCTTGCCGTGAACCTT--TAGCA-TGCTGGAGT
gi|61142 : CGCGGCAGCC-ACAGTCCAAA-TATCTAGC-GTGAACCTC--TAGCA-TGCTGGATTA
gi|61143 : CGCGGC-GCCTA-AGT-ACATGTGTCTTTCCGTGAACCTCTATAGCA-TGCTGGGGTA
gi|61144 : GTGGC-GCC-A-AGTCAAAATTATCTCGCTGTGAACCTC--TAACA-TGCTGGAGTA
gi|61145 : CGGC-ACA-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCC-TGCTGGAGTA
gi|61146 : CAGC-ATC-A-AGTCAAAAGTATCTCGCTGCGAGTCCC--TAGCA-TGCTGGAGTA
gi|61147 : GC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61148 : GC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTA--TAGCA-TGCTGGAGTA
gi|61149 : C-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61150 : GTCAAA-GTATCTCGC-GTGAACCTC--TAGCATTGATGGAGT
gi|61151 : AAAGTATCTCGCCGTGAACCTC--TAGCA-TGCGAGAGTA
gi|61152 : AATATCTCGCTGTGAACCTC--TGGCA-TGCTGGAGTA
gi|61153 : TCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61154 : GCCGTGAACCTC--TAGCA-TGCTGGAGTA
blockSeqs : A T C TA T
blockSeqs : . . . . .
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blockSeqs : . .
blockSeqs : . .
blockSeqCons :
originalCons : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
finalCons : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
Alignments
lowQualScore : 1 1 1 22 1
lowQualScore : . . . .. .
lowQualScore : 8 8 8 00 5
consensus : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
Reference ( family-601 ) : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61128 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61129 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61130 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCTGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61131 : CGCGGC-GCC-A-AGTCAAAAGTCACTC-CTGTGAACCTC--AGGCA-T-CTGGAGT
gi|61132 : CGCGGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--GAGCA-TGCTGGAGTA
gi|61133 : CGCGGC-GCC-A-AGTCAAAAGTATCTTGCCGTGAACCTC--TGGCA-TGCTGGAGTA
gi|61134 : CGTGGC-GCC-A-AGTCAAAAGTATCTCGCCATGAACCTC--TAGCA-TGCTGGAGTA
gi|61135 : CGTGGT-GCC-A-AGTCAAAAGTATCTCACGGTGAACCTC--TAGCA-TGTTGGAGTA
gi|61136 : CGCGGC-GCC-A-AGACAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGGGTA
gi|61137 : CGCGGC-CCC-A-AGTCAAAGGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGT
gi|61138 : CGCGGC-GAC-A-ATTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61139 : CGCAGC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--AAGCA-TGCTGGAGCA
gi|61140 : CACAGC-GCC-A-AGTCAAAAGTATCTCGCAGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61141 : CGTGGC-GCC-A-AGTCAAAGGTATCTTGCCGTGAACCTT--TAGCA-TGCTGGAGT
gi|61142 : CGCGGCAGCC-ACAGTCCAAA-TATCTAGC-GTGAACCTC--TAGCA-TGCTGGATTA
gi|61143 : CGCGGC-GCCTA-AGT-ACATGTGTCTTTCCGTGAACCTCTATAGCA-TGCTGGGGTA
gi|61144 : GTGGC-GCC-A-AGTCAAAATTATCTCGCTGTGAACCTC--TAACA-TGCTGGAGTA
gi|61145 : CGGC-ACA-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCC-TGCTGGAGTA
gi|61146 : CAGC-ATC-A-AGTCAAAAGTATCTCGCTGCGAGTCCC--TAGCA-TGCTGGAGTA
gi|61147 : GC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61148 : GC-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTA--TAGCA-TGCTGGAGTA
gi|61149 : C-GCC-A-AGTCAAAAGTATCTCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61150 : GTCAAA-GTATCTCGC-GTGAACCTC--TAGCATTGATGGAGT
gi|61151 : AAAGTATCTCGCCGTGAACCTC--TAGCA-TGCGAGAGTA
gi|61152 : AATATCTCGCTGTGAACCTC--TGGCA-TGCTGGAGTA
gi|61153 : TCGCCGTGAACCTC--TAGCA-TGCTGGAGTA
gi|61154 : GCCGTGAACCTC--TAGCA-TGCTGGAGTA