lowQualScore : 11
lowQualScore : 0 0 66 33 1 0 0000 0 1 88 00 1 0 0 1111 444
lowQualScore : . . .. .. . . .... . . .. .. . . . .... ...
lowQualScore : 4 4 99 66 2 4 9999 4 2 33 66 2 4 4 5555 999
consensus : AAATTTTGCA-GCCC-TTCACCGGCAN-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTA
Reference ( gi|9882 ) : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTA
gi|9978 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAGT-AAATAATCAATCAAT--CAATCA--A
gi|9948 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTTAAATATTCTC-G--GC--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--ATTaattaggattcccagatat
gi|9887 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--ttttttctcactatatat
gi|10018 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GGCGT-AAAACAGT-AAATAATCAATCAAT--CAATCA--ACTA
gi|9914 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAC-AAATAATCAATCAAT--c
gi|9913 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GGCGT-AAAACAAT-AAATAATCAATCAAT--
gi|9911 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9904 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----GTA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT---AATCA--TTT
gi|9934 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9933 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9932 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9885 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9884 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9883 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9972 : AAATTTTGCA-GCCC-TTCACCGGCAAAT--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAGT-AAATAATCAATCAAT--CAACCA--
gi|9961 : AAATTTTGCC-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----GTA-TGAATGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA---TTAcatt
gi|9892 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAatttc
gi|10024 : AAATTTTGCG-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAGATATTCTC-GA-GT--GG-GACGT-AAAACAGT-AAATAATCAATCAAT--CAATatc
gi|10028 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC----GTA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACTAT-AAATAATCAATCAAT--CAATCt
gi|9951 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GGCGTC-TCC----ATA-TGGGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATTATCGTTAgtgtcagattccctgttagt
gi|9966 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAGT-AAATAATCAATCAAT--attaccctataaca
gi|9965 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9937 : AAATTTTGCA-GCCC-TTCACCGGCAAAT--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAGT-AAATAATCAATCAAT--C-ATCA--TTT
gi|9908 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCCC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--gtcagtagtctgcc
gi|9907 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----GTA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9906 : AAATTTTGCG-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9902 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ACA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9909 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAATGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9982 : AAATTTTGCA-GCTC-TTCACCAGTAA-T--GGT-GACGTT-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATC
gi|10015 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCA---AAT--CAATC---GTTAcccttt
gi|9939 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ACA-TGAGTGAAATATTCTC-T--AT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--C-GTCA--GTTtc
gi|9916 : AAATTTTGCA-GCCC-TTCACTGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAG-AAATAATCAATCAA
gi|9926 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATTAA
gi|9923 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9918 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATC-----TAAGTA--GTTA
gi|9912 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GT-GACGT-AAAACAAT-AAATAATCAATCAAT--gcttat
gi|9910 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-TACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9930 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-TAAACAAT-AAATAATCAATCAAT--
gi|9929 : AAATATTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9997 : AAATTTTGCA-GCCC-TTCGCCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9936 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GA-GACGT-AAAACAAT-AAATAATCAATTAATAATACTCA--G
gi|10002 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAGT-AAATAATCAATTAAT--
gi|9962 : AAGTTTTGCA-GCTC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9900 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GTGGGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9893 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAGT-AAATAATCAATCAAT--CCAT
gi|9940 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----GTA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATTAATCAAT--ttgcaatataatcttctcaa
gi|9897 : AAATTTTGCA-GCTC-TTCACCGACAT-T--GGT-GACGTC-TCT----ATA-TGAGTAAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--ATCA
gi|9888 : AAATTTTGCA-CCCC-TTCACCGGCAA-TATGGT-GACGTC-TCC----ATA-TGAGTGGAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATTA--ggactccccatttgaaata
gi|10021 : AAATTTTGCA-GCCC-TTCACCGGGAA-T--GGT-GAGGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATAAATCAAT---AATCA---TTA
gi|9955 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTG-TCC----ATA-TGAGTGAAATATTCTCAA--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--TTATTA--Gcattattgg
gi|9949 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-AGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAcctcat
gi|9969 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TTC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAC--CA
gi|10033 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTCGG--GT--GG-GACGT-AAAACAAG-AAATAATCAATCAAT--tccccttatctcc
gi|10027 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAG-AAATAATCAATCAAT--
gi|10003 : AAATTTTGTA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-AA--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--CA
gi|9987 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCCATATATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--g
gi|9959 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GC--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9957 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9960 : AAATTTTGCA-TCCC-TTCACCGGCAT-T--GGT-GACGTC-TTC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9958 : AAATTTTGCA-GCCC-TTCACCGGCAAAT--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAGT-AAATAATCAATCAAC--CTTTCA--CTTA
gi|9922 : AAATTTTGCA-GCCC-TTCACCGGCAA-TATGGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-GAAACAAT-AAATAATCAATCAAT--c
gi|9998 : AAATTTTGCA-GCCC-TTCACCGACAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-GGAACAAT-AAATAATCAATCAAT--
gi|9899 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGGAATATTCTC-G--GT--GG-GACGT-AAAACAGT-AAATAATCAACCAAT--
gi|9915 : AAATTTTGCA-GCCC-TTCACCGACAT-T--GGC-GACGTC-TCC----ATA-TGAGTGAAATATTCAC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--C
gi|9980 : AAATTT-GCA-GCCC-TTCGCCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--taaataccc
gi|9970 : AAATTTTGCA-GCCC-TTCATCGGCAA-T--GGT-GACATC-TCC----ATA-TGAGTGGAATATTCTC-GA-GT--GG-GACGT-AAAACAGT-AAATAATCAATCAAT--C
gi|9935 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----GTA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAAT-AAT-------A--GTTAtacccatcaactgtcccttccaa
gi|9989 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----GTA-TGAGTGAAATAGTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATTAATCAAT--c
gi|9894 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----AAA-TGAGTGAAATATTCTC-G--AT--GG-GACGT-AAAACAAT-AAATAATTAATCAAT--
gi|9976 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATC
gi|9931 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TAAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATTATTAATCAAT--
gi|10022 : AAATTTTGCA-GCCC-TTCATCGGCAT-T--GGT-AACGTC-TCC----AT---GAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--CA
gi|10013 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TTC----ATA-CGAGTGAAATATTCTC-G--GT--GG-GGCGT-AAAACAAT-AAATAATCAATCAGT--g
gi|10010 : AAATTTTGCA-GCCC-TTTACTGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATCCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATTAATCAAT--
gi|9983 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAATGAAATATTTTC-GA-GT--GG-GACGT-AAAACAGT-ATATAATCAATCAAT--CCAT
gi|10019 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGG-AAAACAGT-AAATAATCAATCAAT--gtt
gi|10020 : AAATTT-GCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GA-GACGT-AAAACAAT-AAATGATCAATCAAT--
gi|9994 : AAATTTTGCA-GCCC-TTCACCGGTAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAG-AAATAATCAATCAAT--
gi|10029 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----AAAATGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAACAAT-AAATAATCAATCAt
gi|10014 : AAATTTTGCA-GCCC-TTCACCGGCAT-A--GGT-GACGTC-TCT----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGA-AAAACAAT-AAATAATCAATCAAT--
gi|9886 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTAAAATATTTGC-G--GT--GG-GACGT-AAAACAAT-ACATAATCAATCAAT--CTACCA--
gi|9977 : AAATTTTGCA-GCCC-TTCACCAGCAA-T--GGT-GATGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGTCAAAACAAT-ATATAATCAATCAAT--Ccagaaactgcaactcaccccaaaaca
gi|9954 : AAATTTTGCA-GCCCCTTCACCGGCAT-TT-GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACTAT-AAATAATCAATCAAT--CAACCca
gi|10034 : AGATTTTGCA-GCCC-TTCACCTGCAA-T--GGT-GACGTC-TCC----ATA-CGAGTGAAATATTCTC-GA-GT--GG-GACTT-AAAACAAT-AAATAATCAATCAAT--tttccatgggtaccaaaat
gi|10016 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAC-ATATAACCAATAAAT--
gi|9979 : AAATTTTGCAAGCCC-TTCACCGGCAT-T--GGT-GACGTCCTCC----ATA-TGAGTGGAATATTCTC-G--GT--GG-GACGT-AAAACAATAAAATAATCAATCAAT--t
gi|9881 : AAATTTTGCA-GCCC-T-CACTGGCAA-T--GGT-GACGTC-TCC----ATA-TAAGTAGAATATTCTC-G--GT--GG-GACGT-AAAACAAT-ACATAATCGATCAAT--CAGTTA--t
gi|10012 : AAATTTTGCA-ACCC-TTCACAGGCAT-T--GTC-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--Cccccttagtctccccaaaatatatcaa
gi|9995 : AAATTTTGCA-GCCC-TTCACCAGCAT-T--GGT-GACGTT-TCC----ATA-TGAGTGAAATATTCTCAA--GT--GG-GACGT-AAAACAGT-AAATAATCGATCAAT--c
gi|9999 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTG-AATATTCTC-GGTGT--GG-GACGT-TAAACAAT-AAATAATCAATCA
gi|10026 : AAATTTTGCA-GCCC-TTCTACGGCAA-T--GGT-GACGTC-TCC----ATA-TGAGTGGAATATTCTC-GA-GT--GG-GACAT-AAAACAGT-AAATAATCAGTCAAT--
gi|9986 : AAATTTTGCA-GTCC-TTCGCCGGCAT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-GCACAATCCATCAAT---AATCA--
gi|10004 : AAATTTTGCA-GCC--TTCACCGG-AT-T--GGT-GACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--GG-GACGT-AAAA-AAG-AAATAATCAATCaccacat
gi|9950 : AAATTTTTCA-GCCT-TTCACCG-CAT-TT-GGT--ACGTC-TCC----ATA-TGAGTGAAATATTCTC-G--GT--AG-GACGT-AAAACAAT-AAATAATCAATCA
gi|9880 : AAATTTTGCA-GCC--TTCACTG-CAA-TTTGGTTGACGTC-TCC----ATA-TAAGTAGAATATTCTC-G--GT--GGCGACGT-AAAACAAT-ACATAATCGATCAAT-----TCA--GTTA
gi|9879 : AAATTTTGCA-GCC--TTCACTG-CAA-TTTGGTTGACGTC-TCC----ATA-TAAGTAGAATATTCTC-G--GT--GGCGACGT-AAAACAAT-ACATAATCGATCAAT-----TCA--GTTAccccattagtctccccaaaatatatcaa
gi|9878 : AAATTTTGCA-GCC--TTCACTG-CAA-TTTGGTTGACGTC-TCC----ATA-TAAGTAGAATATTCTC-G--GT--GGCGACGT-AAAACAAT-ACATAATCGATCAAT-----TCA--GTTAccccattagtctccccaaaatatatcaa
gi|10262 : ATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCT----ATA-TGAGTGAAATATTCTC-GA-GT--GG-GACGT-AAAACAAC-AAATAATCAATCAAT--CAATccccattagtctccccaaaatatatcaa
gi|10261 : ATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC----GTA-TGAGTGTAATATTCTC-GA-GT--GG-GACGT-AAAACAAT-AAATAATCAATCAAT--t
Alignments
lowQualScore : 11
lowQualScore : 0 0 22 33 1 0 0 0000 66 1 0 0 1111 444
lowQualScore : . . .. .. . . . .... .. . . . .... ...
lowQualScore : 4 4 22 66 2 4 4 8888 33 2 4 4 0000 222
consensus : AAATTTTGCA-GCCC-TTCACCGGCAN-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTA
Reference ( family-59 ) : AAATTTTGCA-GCCC-TTCACCGGCAN-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTA
gi|10002 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATTAAT--
gi|10003 : AAATTTTGTA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-AAGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CA
gi|10004 : AAATTTTGCA-GCC--TTCACCGG-AT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAA-AAG-AAATAATCAATCg
gi|10010 : AAATTTTGCA-GCCC-TTTACTGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATCCTCGA-GTGG-GACGT-AAAACAAT-AAATAATTAATCAAT--
gi|10012 : AAATTTTGCA-ACCC-TTCACAGGCAT-T--GTC-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--C
gi|10013 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TTC-ATAC----GAGTGAAATATTCTCG--GTGG-GGCGT-AAAACAAT-AAATAATCAATCAGT--c
gi|10014 : AAATTTTGCA-GCCC-TTCACCGGCAT-A--GGT-GACGTC-TCT-ATAT----GAGTGAAATATTCTCG--GTGG-GACGA-AAAACAAT-AAATAATCAATCAAT--
gi|10015 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCA---AAT--CAATC---GTTA
gi|10016 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAC-ATATAACCAATAAAT--tc
gi|10018 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GGCGT-AAAACAGT-AAATAATCAATCAAT--CAATCA--ACTAt
gi|10019 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGG-AAAACAGT-AAATAATCAATCAAT--c
gi|10020 : AAATTT-GCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGA-GACGT-AAAACAAT-AAATGATCAATCAAT--
gi|10021 : AAATTTTGCA-GCCC-TTCACCGGGAA-T--GGT-GAGGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATAAATCAAT---AATCA---TTA
gi|10022 : AAATTTTGCA-GCCC-TTCATCGGCAT-T--GGT-AACGTC-TCC---AT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAcattattgg
gi|10024 : AAATTTTGCG-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAGATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--CAATg
gi|10026 : AAATTTTGCA-GCCC-TTCTACGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGGAATATTCTCGA-GTGG-GACAT-AAAACAGT-AAATAATCAGTCAAT--t
gi|10027 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAG-AAATAATCAATCAAT--
gi|10028 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACTAT-AAATAATCAATCAAT--CAATC
gi|10029 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCCAAAAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAgtgtcagattccctgttagt
gi|10033 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGG-GTGG-GACGT-AAAACAAG-AAATAATCAATCAAT--
gi|10034 : AGATTTTGCA-GCCC-TTCACCTGCAA-T--GGT-GACGTC-TCC-ATAC----GAGTGAAATATTCTCGA-GTGG-GACTT-AAAACAAT-AAATAATCAATCAAT--
gi|10261 : ATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-GTAT----GAGTGTAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|10262 : ATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCT-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAC-AAATAATCAATCAAT--CAAT
gi|9878 : AAATTTTGCA-GCC--TTCACTG-CAA-TTTGGTTGACGTC-TCC-ATAT----AAGTAGAATATTCTCG--GTGGCGACGT-AAAACAAT-ACATAATCGATCAAT-----TCA--GTTAt
gi|9879 : AAATTTTGCA-GCC--TTCACTG-CAA-TTTGGTTGACGTC-TCC-ATAT----AAGTAGAATATTCTCG--GTGGCGACGT-AAAACAAT-ACATAATCGATCAAT-----TCA--GTTAccccattagtctccccaaaatatatcaa
gi|9880 : AAATTTTGCA-GCC--TTCACTG-CAA-TTTGGTTGACGTC-TCC-ATAT----AAGTAGAATATTCTCG--GTGGCGACGT-AAAACAAT-ACATAATCGATCAAT-----TCA--GTTAccccattagtctccccaaaatatatcaa
gi|9881 : AAATTTTGCA-GCCC-T-CACTGGCAA-T--GGT-GACGTC-TCC-ATAT----AAGTAGAATATTCTCG--GTGG-GACGT-AAAACAAT-ACATAATCGATCAAT--CAGTTA--ccccattagtctccccaaaatatatcaa
gi|9882 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTAccccttagtctccccaaaatatatcaa
gi|9883 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9884 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9885 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9886 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTAAAATATTTGCG--GTGG-GACGT-AAAACAAT-ACATAATCAATCAAT--CTACCA--
gi|9887 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--cagaaactgcaactcaccccaaaaca
gi|9888 : AAATTTTGCA-CCCC-TTCACCGGCAA-TATGGT-GACGTC-TCC-ATAT----GAGTGGAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATTA--
gi|9892 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAA
gi|9893 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--CCATatc
gi|9894 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-AAAT----GAGTGAAATATTCTCGA--TGG-GACGT-AAAACAAT-AAATAATTAATCAAT--ttgcaatataatcttctcaa
gi|9897 : AAATTTTGCA-GCTC-TTCACCGACAT-T--GGT-GACGTC-TCT-ATAT----GAGTAAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--ATCA
gi|9899 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGGAATATTCTCG--GTGG-GACGT-AAAACAGT-AAATAATCAACCAAT--ggactccccatttgaaata
gi|9900 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGGTGGGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9902 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ACAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9904 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT---AATCA--TTT
gi|9906 : AAATTTTGCG-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9907 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9908 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCCCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9909 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAATGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9910 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-TACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9911 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9912 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGT-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9913 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GGCGT-AAAACAAT-AAATAATCAATCAAT--
gi|9914 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAC-AAATAATCAATCAAT--
gi|9915 : AAATTTTGCA-GCCC-TTCACCGACAT-T--GGC-GACGTC-TCC-ATAT----GAGTGAAATATTCACG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--C
gi|9916 : AAATTTTGCA-GCCC-TTCACTGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAG-AAATAATCAATCAAtaaataccc
gi|9918 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATC-----TAAGTA--GTTA
gi|9922 : AAATTTTGCA-GCCC-TTCACCGGCAA-TATGGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-GAAACAAT-AAATAATCAATCAAT--gcttat
gi|9923 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9926 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATTAA
gi|9929 : AAATATTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9930 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-TAAACAAT-AAATAATCAATCAAT--
gi|9931 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----AAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATTATTAATCAAT--
gi|9932 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9933 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9934 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9935 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAAT-AAT-------A--GTTA
gi|9936 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGA-GACGT-AAAACAAT-AAATAATCAATTAATAATACTCA--Gc
gi|9937 : AAATTTTGCA-GCCC-TTCACCGGCAAAT--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--C-ATCA--TTT
gi|9939 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ACAT----GAGTGAAATATTCTCTA--TGG-GACGT-AAAACAAT-AAATAATCAATCAAT--C-GTCA--GTTgtcagtagtctgcc
gi|9940 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATTAATCAAT--
gi|9948 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTTAAATATTCTCG--GCGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--ATT
gi|9949 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAA----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAttttttctcactatatat
gi|9950 : AAATTTTTCA-GCCT-TTCACCG-CAT-TT-GGT--ACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTAG-GACGT-AAAACAAT-AAATAATCAATCA
gi|9951 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GGCGTC-TCC-ATAT----GGGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATTATCGTTA
gi|9954 : AAATTTTGCA-GCCCCTTCACCGGCAT-TT-GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACTAT-AAATAATCAATCAAT--CAACCattaccctataaca
gi|9955 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTG-TCC-ATAT----GAGTGAAATATTCTCAA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--TTATTA--Gtttccatgggtaccaaaat
gi|9957 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--cctcat
gi|9958 : AAATTTTGCA-GCCC-TTCACCGGCAAAT--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAC--CTTTCA--CTTA
gi|9959 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GCGG-GACGT-AAAACAAT-AAATAATCAATCAAT--c
gi|9960 : AAATTTTGCA-TCCC-TTCACCGGCAT-T--GGT-GACGTC-TTC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9961 : AAATTTTGCC-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAATGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA---TTA
gi|9962 : AAGTTTTGCA-GCTC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--atttc
gi|9965 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9966 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9969 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TTC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAC--CA
gi|9970 : AAATTTTGCA-GCCC-TTCATCGGCAA-T--GGT-GACATC-TCC-ATAT----GAGTGGAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--Ctccccttatctcc
gi|9972 : AAATTTTGCA-GCCC-TTCACCGGCAAAT--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--CAACCA--tacccatcaactgtcccttccaa
gi|9976 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCcatt
gi|9977 : AAATTTTGCA-GCCC-TTCACCAGCAA-T--GGT-GATGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGTCAAAACAAT-ATATAATCAATCAAT--C
gi|9978 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--CAATCA--Aca
gi|9979 : AAATTTTGCAAGCCC-TTCACCGGCAT-T--GGT-GACGTCCTCC-ATAT----GAGTGGAATATTCTCG--GTGG-GACGT-AAAACAATAAAATAATCAATCAAT--aattaggattcccagatat
gi|9980 : AAATTT-GCA-GCCC-TTCGCCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--t
gi|9982 : AAATTTTGCA-GCTC-TTCACCAGTAA-T--GGT-GACGTT-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATC
gi|9983 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAATGAAATATTTTCGA-GTGG-GACGT-AAAACAGT-ATATAATCAATCAAT--CCATcccttt
gi|9986 : AAATTTTGCA-GTCC-TTCGCCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-GCACAATCCATCAAT---AATCA--gtt
gi|9987 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATATATATGAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--accacat
gi|9989 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATAGTCTCG--GTGG-GACGT-AAAACAAT-AAATAATTAATCAAT--
gi|9994 : AAATTTTGCA-GCCC-TTCACCGGTAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAG-AAATAATCAATCAAT--
gi|9995 : AAATTTTGCA-GCCC-TTCACCAGCAT-T--GGT-GACGTT-TCC-ATAT----GAGTGAAATATTCTCAA-GTGG-GACGT-AAAACAGT-AAATAATCGATCAAT--t
gi|9997 : AAATTTTGCA-GCCC-TTCGCCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9998 : AAATTTTGCA-GCCC-TTCACCGACAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-GGAACAAT-AAATAATCAATCAAT--
gi|9999 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTG-AATATTCTCGGTGTGG-GACGT-TAAACAAT-AAATAATCAATCA
Alignments
lowQualScore : 11
lowQualScore : 0 0 22 33 1 0 0 0000 66 1 0 0 1111 444
lowQualScore : . . .. .. . . . .... .. . . . .... ...
lowQualScore : 4 4 22 66 2 4 4 8888 33 2 4 4 0000 222
consensus : AAATTTTGCA-GCCC-TTCACCGGCAN-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTA
Reference ( family-59 ) : AAATTTTGCA-GCCC-TTCACCGGCAN-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTA
gi|10002 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATTAAT--
gi|10003 : AAATTTTGTA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-AAGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CA
gi|10004 : AAATTTTGCA-GCC--TTCACCGG-AT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAA-AAG-AAATAATCAATCg
gi|10010 : AAATTTTGCA-GCCC-TTTACTGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATCCTCGA-GTGG-GACGT-AAAACAAT-AAATAATTAATCAAT--
gi|10012 : AAATTTTGCA-ACCC-TTCACAGGCAT-T--GTC-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--C
gi|10013 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TTC-ATAC----GAGTGAAATATTCTCG--GTGG-GGCGT-AAAACAAT-AAATAATCAATCAGT--c
gi|10014 : AAATTTTGCA-GCCC-TTCACCGGCAT-A--GGT-GACGTC-TCT-ATAT----GAGTGAAATATTCTCG--GTGG-GACGA-AAAACAAT-AAATAATCAATCAAT--
gi|10015 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCA---AAT--CAATC---GTTA
gi|10016 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAC-ATATAACCAATAAAT--tc
gi|10018 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GGCGT-AAAACAGT-AAATAATCAATCAAT--CAATCA--ACTAt
gi|10019 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGG-AAAACAGT-AAATAATCAATCAAT--c
gi|10020 : AAATTT-GCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGA-GACGT-AAAACAAT-AAATGATCAATCAAT--
gi|10021 : AAATTTTGCA-GCCC-TTCACCGGGAA-T--GGT-GAGGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATAAATCAAT---AATCA---TTA
gi|10022 : AAATTTTGCA-GCCC-TTCATCGGCAT-T--GGT-AACGTC-TCC---AT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAcattattgg
gi|10024 : AAATTTTGCG-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAGATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--CAATg
gi|10026 : AAATTTTGCA-GCCC-TTCTACGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGGAATATTCTCGA-GTGG-GACAT-AAAACAGT-AAATAATCAGTCAAT--t
gi|10027 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAG-AAATAATCAATCAAT--
gi|10028 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACTAT-AAATAATCAATCAAT--CAATC
gi|10029 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCCAAAAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAgtgtcagattccctgttagt
gi|10033 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGG-GTGG-GACGT-AAAACAAG-AAATAATCAATCAAT--
gi|10034 : AGATTTTGCA-GCCC-TTCACCTGCAA-T--GGT-GACGTC-TCC-ATAC----GAGTGAAATATTCTCGA-GTGG-GACTT-AAAACAAT-AAATAATCAATCAAT--
gi|10261 : ATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-GTAT----GAGTGTAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|10262 : ATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCT-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAC-AAATAATCAATCAAT--CAAT
gi|9878 : AAATTTTGCA-GCC--TTCACTG-CAA-TTTGGTTGACGTC-TCC-ATAT----AAGTAGAATATTCTCG--GTGGCGACGT-AAAACAAT-ACATAATCGATCAAT-----TCA--GTTAt
gi|9879 : AAATTTTGCA-GCC--TTCACTG-CAA-TTTGGTTGACGTC-TCC-ATAT----AAGTAGAATATTCTCG--GTGGCGACGT-AAAACAAT-ACATAATCGATCAAT-----TCA--GTTAccccattagtctccccaaaatatatcaa
gi|9880 : AAATTTTGCA-GCC--TTCACTG-CAA-TTTGGTTGACGTC-TCC-ATAT----AAGTAGAATATTCTCG--GTGGCGACGT-AAAACAAT-ACATAATCGATCAAT-----TCA--GTTAccccattagtctccccaaaatatatcaa
gi|9881 : AAATTTTGCA-GCCC-T-CACTGGCAA-T--GGT-GACGTC-TCC-ATAT----AAGTAGAATATTCTCG--GTGG-GACGT-AAAACAAT-ACATAATCGATCAAT--CAGTTA--ccccattagtctccccaaaatatatcaa
gi|9882 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTAccccttagtctccccaaaatatatcaa
gi|9883 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9884 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9885 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9886 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTAAAATATTTGCG--GTGG-GACGT-AAAACAAT-ACATAATCAATCAAT--CTACCA--
gi|9887 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--cagaaactgcaactcaccccaaaaca
gi|9888 : AAATTTTGCA-CCCC-TTCACCGGCAA-TATGGT-GACGTC-TCC-ATAT----GAGTGGAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATTA--
gi|9892 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAA
gi|9893 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--CCATatc
gi|9894 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-AAAT----GAGTGAAATATTCTCGA--TGG-GACGT-AAAACAAT-AAATAATTAATCAAT--ttgcaatataatcttctcaa
gi|9897 : AAATTTTGCA-GCTC-TTCACCGACAT-T--GGT-GACGTC-TCT-ATAT----GAGTAAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--ATCA
gi|9899 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGGAATATTCTCG--GTGG-GACGT-AAAACAGT-AAATAATCAACCAAT--ggactccccatttgaaata
gi|9900 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGGTGGGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9902 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ACAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9904 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT---AATCA--TTT
gi|9906 : AAATTTTGCG-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9907 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9908 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCCCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9909 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAATGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9910 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-TACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9911 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9912 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGT-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9913 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GGCGT-AAAACAAT-AAATAATCAATCAAT--
gi|9914 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAC-AAATAATCAATCAAT--
gi|9915 : AAATTTTGCA-GCCC-TTCACCGACAT-T--GGC-GACGTC-TCC-ATAT----GAGTGAAATATTCACG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--C
gi|9916 : AAATTTTGCA-GCCC-TTCACTGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAG-AAATAATCAATCAAtaaataccc
gi|9918 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATC-----TAAGTA--GTTA
gi|9922 : AAATTTTGCA-GCCC-TTCACCGGCAA-TATGGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-GAAACAAT-AAATAATCAATCAAT--gcttat
gi|9923 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9926 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATTAA
gi|9929 : AAATATTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9930 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-TAAACAAT-AAATAATCAATCAAT--
gi|9931 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----AAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATTATTAATCAAT--
gi|9932 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9933 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9934 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9935 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAAT-AAT-------A--GTTA
gi|9936 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGA-GACGT-AAAACAAT-AAATAATCAATTAATAATACTCA--Gc
gi|9937 : AAATTTTGCA-GCCC-TTCACCGGCAAAT--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--C-ATCA--TTT
gi|9939 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ACAT----GAGTGAAATATTCTCTA--TGG-GACGT-AAAACAAT-AAATAATCAATCAAT--C-GTCA--GTTgtcagtagtctgcc
gi|9940 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATTAATCAAT--
gi|9948 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTTAAATATTCTCG--GCGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--ATT
gi|9949 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAA----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAttttttctcactatatat
gi|9950 : AAATTTTTCA-GCCT-TTCACCG-CAT-TT-GGT--ACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTAG-GACGT-AAAACAAT-AAATAATCAATCA
gi|9951 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GGCGTC-TCC-ATAT----GGGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATTATCGTTA
gi|9954 : AAATTTTGCA-GCCCCTTCACCGGCAT-TT-GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACTAT-AAATAATCAATCAAT--CAACCattaccctataaca
gi|9955 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTG-TCC-ATAT----GAGTGAAATATTCTCAA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--TTATTA--Gtttccatgggtaccaaaat
gi|9957 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--cctcat
gi|9958 : AAATTTTGCA-GCCC-TTCACCGGCAAAT--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAC--CTTTCA--CTTA
gi|9959 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GCGG-GACGT-AAAACAAT-AAATAATCAATCAAT--c
gi|9960 : AAATTTTGCA-TCCC-TTCACCGGCAT-T--GGT-GACGTC-TTC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9961 : AAATTTTGCC-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAATGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA---TTA
gi|9962 : AAGTTTTGCA-GCTC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--atttc
gi|9965 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9966 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9969 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TTC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAC--CA
gi|9970 : AAATTTTGCA-GCCC-TTCATCGGCAA-T--GGT-GACATC-TCC-ATAT----GAGTGGAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--Ctccccttatctcc
gi|9972 : AAATTTTGCA-GCCC-TTCACCGGCAAAT--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--CAACCA--tacccatcaactgtcccttccaa
gi|9976 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCcatt
gi|9977 : AAATTTTGCA-GCCC-TTCACCAGCAA-T--GGT-GATGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGTCAAAACAAT-ATATAATCAATCAAT--C
gi|9978 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--CAATCA--Aca
gi|9979 : AAATTTTGCAAGCCC-TTCACCGGCAT-T--GGT-GACGTCCTCC-ATAT----GAGTGGAATATTCTCG--GTGG-GACGT-AAAACAATAAAATAATCAATCAAT--aattaggattcccagatat
gi|9980 : AAATTT-GCA-GCCC-TTCGCCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--t
gi|9982 : AAATTTTGCA-GCTC-TTCACCAGTAA-T--GGT-GACGTT-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATC
gi|9983 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAATGAAATATTTTCGA-GTGG-GACGT-AAAACAGT-ATATAATCAATCAAT--CCATcccttt
gi|9986 : AAATTTTGCA-GTCC-TTCGCCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-GCACAATCCATCAAT---AATCA--gtt
gi|9987 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATATATATGAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--accacat
gi|9989 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATAGTCTCG--GTGG-GACGT-AAAACAAT-AAATAATTAATCAAT--
gi|9994 : AAATTTTGCA-GCCC-TTCACCGGTAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAG-AAATAATCAATCAAT--
gi|9995 : AAATTTTGCA-GCCC-TTCACCAGCAT-T--GGT-GACGTT-TCC-ATAT----GAGTGAAATATTCTCAA-GTGG-GACGT-AAAACAGT-AAATAATCGATCAAT--t
gi|9997 : AAATTTTGCA-GCCC-TTCGCCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9998 : AAATTTTGCA-GCCC-TTCACCGACAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-GGAACAAT-AAATAATCAATCAAT--
gi|9999 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTG-AATATTCTCGGTGTGG-GACGT-TAAACAAT-AAATAATCAATCA
blockSeqs : AA TT T GT C TCG
blockSeqs : AA TT T GT C A
blockSeqs : AA TT T A C G
blockSeqs : A AT . A . G
blockSeqs : T AT . A . G
blockSeqs : A T . A . G
blockSeqs : T T . A . A
blockSeqs : T . . A . T
blockSeqs : T . . A . G
blockSeqs : A . . A . G
blockSeqs : A . . A . G
blockSeqs : A . . A . T
blockSeqs : T . . A . G
blockSeqs : T . . G . A
blockSeqs : A . . A . G
blockSeqs : T . . A . C
blockSeqs : A . . A . A
blockSeqs : A . . A . .
blockSeqs : A . . A . .
blockSeqs : A . . A .
blockSeqs : T . . A .
blockSeqs : A . . A .
blockSeqs : A . . A .
blockSeqs : A . . A .
blockSeqs : T . . A .
blockSeqs : A . . A .
blockSeqs : A . . A .
blockSeqs : A . . A .
blockSeqs : A . . A .
blockSeqs : A . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : A . . A .
blockSeqs : A . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : T . . A .
blockSeqs : A . . A .
blockSeqs : T . . . .
blockSeqs : A . . . .
blockSeqs : A . . . .
blockSeqs : T . . . .
blockSeqs : A . . . .
blockSeqs : T . . . .
blockSeqs : A . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : A . . . .
blockSeqs : A . . . .
blockSeqs : A . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : A . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : A . . . .
blockSeqs : A . . . .
blockSeqs : A . . . .
blockSeqs : T . . . .
blockSeqs : A . . . .
blockSeqs : T . . . .
blockSeqs : A . . . .
blockSeqs : A . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : A . . . .
blockSeqs : A . . . .
blockSeqs : T . . . .
blockSeqs : A . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : T . . . .
blockSeqs : A . . . .
blockSeqs : A . . . .
blockSeqs : T . . . .
blockSeqCons : A*
originalCons : AAATTTTGCA-GCCC-TTCACCGGCAN-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTA
finalCons : AAATTTTGCA-GCCC-TTCACCGGCAN-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTA
Alignments
lowQualScore : 11
lowQualScore : 0 0 22 33 1 0 0 0000 66 1 0 0 1111 444
lowQualScore : . . .. .. . . . .... .. . . . .... ...
lowQualScore : 4 4 22 66 2 4 4 8888 33 2 4 4 0000 222
consensus : AAATTTTGCA-GCCC-TTCACCGGCAN-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTA
Reference ( family-59 ) : AAATTTTGCA-GCCC-TTCACCGGCAN-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTA
gi|10002 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATTAAT--
gi|10003 : AAATTTTGTA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-AAGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CA
gi|10004 : AAATTTTGCA-GCC--TTCACCGG-AT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAA-AAG-AAATAATCAATCg
gi|10010 : AAATTTTGCA-GCCC-TTTACTGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATCCTCGA-GTGG-GACGT-AAAACAAT-AAATAATTAATCAAT--
gi|10012 : AAATTTTGCA-ACCC-TTCACAGGCAT-T--GTC-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--C
gi|10013 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TTC-ATAC----GAGTGAAATATTCTCG--GTGG-GGCGT-AAAACAAT-AAATAATCAATCAGT--c
gi|10014 : AAATTTTGCA-GCCC-TTCACCGGCAT-A--GGT-GACGTC-TCT-ATAT----GAGTGAAATATTCTCG--GTGG-GACGA-AAAACAAT-AAATAATCAATCAAT--
gi|10015 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCA---AAT--CAATC---GTTA
gi|10016 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAC-ATATAACCAATAAAT--tc
gi|10018 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GGCGT-AAAACAGT-AAATAATCAATCAAT--CAATCA--ACTAt
gi|10019 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGG-AAAACAGT-AAATAATCAATCAAT--c
gi|10020 : AAATTT-GCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGA-GACGT-AAAACAAT-AAATGATCAATCAAT--
gi|10021 : AAATTTTGCA-GCCC-TTCACCGGGAA-T--GGT-GAGGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATAAATCAAT---AATCA---TTA
gi|10022 : AAATTTTGCA-GCCC-TTCATCGGCAT-T--GGT-AACGTC-TCC---AT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAcattattgg
gi|10024 : AAATTTTGCG-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAGATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--CAATg
gi|10026 : AAATTTTGCA-GCCC-TTCTACGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGGAATATTCTCGA-GTGG-GACAT-AAAACAGT-AAATAATCAGTCAAT--t
gi|10027 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAG-AAATAATCAATCAAT--
gi|10028 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACTAT-AAATAATCAATCAAT--CAATC
gi|10029 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCCAAAAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAgtgtcagattccctgttagt
gi|10033 : AAATTTTGCA-GCCC-TTCACCGGTAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGG-GTGG-GACGT-AAAACAAG-AAATAATCAATCAAT--
gi|10034 : AGATTTTGCA-GCCC-TTCACCTGCAA-T--GGT-GACGTC-TCC-ATAC----GAGTGAAATATTCTCGA-GTGG-GACTT-AAAACAAT-AAATAATCAATCAAT--
gi|10261 : ATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-GTAT----GAGTGTAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|10262 : ATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCT-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAC-AAATAATCAATCAAT--CAAT
gi|9878 : AAATTTTGCA-GCC--TTCACTG-CAA-TTTGGTTGACGTC-TCC-ATAT----AAGTAGAATATTCTCG--GTGGCGACGT-AAAACAAT-ACATAATCGATCAAT-----TCA--GTTAt
gi|9879 : AAATTTTGCA-GCC--TTCACTG-CAA-TTTGGTTGACGTC-TCC-ATAT----AAGTAGAATATTCTCG--GTGGCGACGT-AAAACAAT-ACATAATCGATCAAT-----TCA--GTTAccccattagtctccccaaaatatatcaa
gi|9880 : AAATTTTGCA-GCC--TTCACTG-CAA-TTTGGTTGACGTC-TCC-ATAT----AAGTAGAATATTCTCG--GTGGCGACGT-AAAACAAT-ACATAATCGATCAAT-----TCA--GTTAccccattagtctccccaaaatatatcaa
gi|9881 : AAATTTTGCA-GCCC-T-CACTGGCAA-T--GGT-GACGTC-TCC-ATAT----AAGTAGAATATTCTCG--GTGG-GACGT-AAAACAAT-ACATAATCGATCAAT--CAGTTA--ccccattagtctccccaaaatatatcaa
gi|9882 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--GTTAccccttagtctccccaaaatatatcaa
gi|9883 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9884 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9885 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9886 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTAAAATATTTGCG--GTGG-GACGT-AAAACAAT-ACATAATCAATCAAT--CTACCA--
gi|9887 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--cagaaactgcaactcaccccaaaaca
gi|9888 : AAATTTTGCA-CCCC-TTCACCGGCAA-TATGGT-GACGTC-TCC-ATAT----GAGTGGAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATTA--
gi|9892 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAA
gi|9893 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--CCATatc
gi|9894 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-AAAT----GAGTGAAATATTCTCGA--TGG-GACGT-AAAACAAT-AAATAATTAATCAAT--ttgcaatataatcttctcaa
gi|9897 : AAATTTTGCA-GCTC-TTCACCGACAT-T--GGT-GACGTC-TCT-ATAT----GAGTAAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--ATCA
gi|9899 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGGAATATTCTCG--GTGG-GACGT-AAAACAGT-AAATAATCAACCAAT--ggactccccatttgaaata
gi|9900 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGGTGGGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9902 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ACAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9904 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT---AATCA--TTT
gi|9906 : AAATTTTGCG-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9907 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9908 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCCCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9909 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAATGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9910 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-TACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9911 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9912 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGT-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9913 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GGCGT-AAAACAAT-AAATAATCAATCAAT--
gi|9914 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAC-AAATAATCAATCAAT--
gi|9915 : AAATTTTGCA-GCCC-TTCACCGACAT-T--GGC-GACGTC-TCC-ATAT----GAGTGAAATATTCACG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--C
gi|9916 : AAATTTTGCA-GCCC-TTCACTGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAG-AAATAATCAATCAAtaaataccc
gi|9918 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATC-----TAAGTA--GTTA
gi|9922 : AAATTTTGCA-GCCC-TTCACCGGCAA-TATGGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-GAAACAAT-AAATAATCAATCAAT--gcttat
gi|9923 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9926 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATTAA
gi|9929 : AAATATTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9930 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-TAAACAAT-AAATAATCAATCAAT--
gi|9931 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----AAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATTATTAATCAAT--
gi|9932 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9933 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9934 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9935 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAAT-AAT-------A--GTTA
gi|9936 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGA-GACGT-AAAACAAT-AAATAATCAATTAATAATACTCA--Gc
gi|9937 : AAATTTTGCA-GCCC-TTCACCGGCAAAT--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--C-ATCA--TTT
gi|9939 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ACAT----GAGTGAAATATTCTCTA--TGG-GACGT-AAAACAAT-AAATAATCAATCAAT--C-GTCA--GTTgtcagtagtctgcc
gi|9940 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATTAATCAAT--
gi|9948 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTTAAATATTCTCG--GCGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA--ATT
gi|9949 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAA----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAttttttctcactatatat
gi|9950 : AAATTTTTCA-GCCT-TTCACCG-CAT-TT-GGT--ACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTAG-GACGT-AAAACAAT-AAATAATCAATCA
gi|9951 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GGCGTC-TCC-ATAT----GGGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATTATCGTTA
gi|9954 : AAATTTTGCA-GCCCCTTCACCGGCAT-TT-GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACTAT-AAATAATCAATCAAT--CAACCattaccctataaca
gi|9955 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTG-TCC-ATAT----GAGTGAAATATTCTCAA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--TTATTA--Gtttccatgggtaccaaaat
gi|9957 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--cctcat
gi|9958 : AAATTTTGCA-GCCC-TTCACCGGCAAAT--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAC--CTTTCA--CTTA
gi|9959 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GCGG-GACGT-AAAACAAT-AAATAATCAATCAAT--c
gi|9960 : AAATTTTGCA-TCCC-TTCACCGGCAT-T--GGT-GACGTC-TTC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--
gi|9961 : AAATTTTGCC-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAATGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATCA---TTA
gi|9962 : AAGTTTTGCA-GCTC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--atttc
gi|9965 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9966 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9969 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TTC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAC--CA
gi|9970 : AAATTTTGCA-GCCC-TTCATCGGCAA-T--GGT-GACATC-TCC-ATAT----GAGTGGAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--Ctccccttatctcc
gi|9972 : AAATTTTGCA-GCCC-TTCACCGGCAAAT--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--CAACCA--tacccatcaactgtcccttccaa
gi|9976 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCcatt
gi|9977 : AAATTTTGCA-GCCC-TTCACCAGCAA-T--GGT-GATGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGTCAAAACAAT-ATATAATCAATCAAT--C
gi|9978 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--CAATCA--Aca
gi|9979 : AAATTTTGCAAGCCC-TTCACCGGCAT-T--GGT-GACGTCCTCC-ATAT----GAGTGGAATATTCTCG--GTGG-GACGT-AAAACAATAAAATAATCAATCAAT--aattaggattcccagatat
gi|9980 : AAATTT-GCA-GCCC-TTCGCCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCG--GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--t
gi|9982 : AAATTTTGCA-GCTC-TTCACCAGTAA-T--GGT-GACGTT-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--CAATC
gi|9983 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAATGAAATATTTTCGA-GTGG-GACGT-AAAACAGT-ATATAATCAATCAAT--CCATcccttt
gi|9986 : AAATTTTGCA-GTCC-TTCGCCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-GCACAATCCATCAAT---AATCA--gtt
gi|9987 : AAATTTTGCA-GCCC-TTCACCGGCAA-T--GGT-GACGTC-TCC-ATATATATGAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAT-AAATAATCAATCAAT--accacat
gi|9989 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-GTAT----GAGTGAAATAGTCTCG--GTGG-GACGT-AAAACAAT-AAATAATTAATCAAT--
gi|9994 : AAATTTTGCA-GCCC-TTCACCGGTAT-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAAG-AAATAATCAATCAAT--
gi|9995 : AAATTTTGCA-GCCC-TTCACCAGCAT-T--GGT-GACGTT-TCC-ATAT----GAGTGAAATATTCTCAA-GTGG-GACGT-AAAACAGT-AAATAATCGATCAAT--t
gi|9997 : AAATTTTGCA-GCCC-TTCGCCGGCAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-AAAACAGT-AAATAATCAATCAAT--
gi|9998 : AAATTTTGCA-GCCC-TTCACCGACAA-T--GGT-GACGTC-TCC-ATAT----GAGTGAAATATTCTCGA-GTGG-GACGT-GGAACAAT-AAATAATCAATCAAT--
gi|9999 : AAATTTTGCA-GCCC-TTCACCGGCAT-T--GGT-GACGTC-TCC-ATAT----GAGTG-AATATTCTCGGTGTGG-GACGT-TAAACAAT-AAATAATCAATCA