lowQualScore : 11 1111111111 22222222 22222
lowQualScore : 1 1 22 2 2 333 2 1 33333 33 1 1 4444444444 1 222 3 00000000 22 22 33333 1 1
lowQualScore : . . .. . . ... . . ..... .. . . .......... . ... . ........ .. .. ..... . .
lowQualScore : 7 4 00 9 9 999 9 4 66666 99 4 4 3333333333 5 777 1 66666666 33 44 11111 7 7
consensus : TAAA-GGCCCGGTCAC-A--CC-G-CC---C-GAA-CTT-----TG-TTGG-AGCGTTC-CT------G-G-A-GC---GG-TG---AAN-AA--AATTC--ANACNCCGCTCGTCA-CC-GTTCAC
Reference ( gi|77254 ) : TAAA-GGCCCGGTCAC-A--CC-G-CC---C-GAA-CTT-----TT-TTGG-AGCGTTC-CT------G-G-A-GC---GG-TG---AAA-AA--AATTC--AT-CTCCGCTCGTTA-CC-GTTCAC
gi|77255 : TAAA-GGCCCGGTCAC-A--CC-T-CC---C-GAA-CTT-----TG-TTGG-AGCGTTC-CT------G-G-A-GC---GG-TG---AAA-AA--AATTC--GT-CTCCGCTCGTTA-CC-GTTCAC
gi|77259 : TAAA-GGCCCGGTCAC-A--CC-G-CC---G-GAA-CTT-----TG-TTGG-AACGTTC-CT------G-G-A-GC---GG-TG---AGA-AA--TGTCC--AT-CTCCGATCATCA-CC-GTTCAC
gi|77258 : TAAA-GGCCCGGTCAC-A--CC-AACC---C-GAA-CTT-----TG-TTGG-AGCGTTC-CT------GTA-A-GC---GG-TGTGAAAA-AA--AAATC--AT-CT-CGCTTGTTA-CC-GTTCAC
gi|77256 : TAAA-GGCC-GGTCAC-A--CC-G-TC---C-GCA-CTT-----TG-TTGG-AGCG-TC-CT------G-GCA-GC---GG-TG---AAA-AATTAATTC--GT-CTCCGCTCGTTAGCC-GTTCAC
gi|77261 : TAAA-GGTCTGGTCAC-A--CC-G-CC---C-GAA-CAT-----TG-TTGG-AGCGTTC-CT------G-G-A-GC---GG-TG---AAA-AA--Aa
gi|77260 : TAAA-GGCCCGGTCAC-A--CC-G-CC---C-GAA-CGT-----TG-TTGG-AGCGTTC-CT------T-C-A-AC---GG-TG-----C-CG--AATTT--AGACAACGCTCGTTA-CC-
gi|77262 : TAAA-GGCCCGGTCAC-A--CC-A-CC---C-GAA-CTT-----TT-ATGG-AGCGGTC-CT------T-C-A-AC---GG-ccaca
gi|77263 : TAAA-GGTCCGTTCAC-A--CC-G-CC---C-GAA-CGT-----TG-TTGG-AGCATTC-CT------T-C-A-AT---GG-TG-----T-CA--AATTT--AGACAACGTTCGTCA-CC-GCGCAC
gi|77257 : TAAA-GGCCCG-TCAC-ATGCC-G-CC---CCGAA-CGT-----TG-TTG--AGCGTTC-CT------T-C-A-AC---GG-TG-----C-CG--AATTT--AGACAACGCTCGTCA-CC-GCGCACaa
gi|77265 : TAAATGGCCCGG-CAC-A--CCCG-CCT--C-GCA-CTT-----TG-TTGG-AGCGGTC-CTTCAACCG-G-A-GCCAAAT-TC---AGA-AG--AA-----------CGCTCGTCA-CC-aa
gi|77264 : TAAA-GGCCCGGTCAC-A--CC-GACC---C-CAC-GGT-----TG-TTGG-AGCTTCC-CT------T-C-A--C---GG-TG---cgcacaa
gi|77266 : AAA-GGCCCGATCAC-A--CC-G-CC---C-GAA-CTT-----TG-TTGG-AGCGTTC-CT------T-C-A-AC---GG-GG-----C-CA--AATTT--AGACAACGCTCGTCA-CC-ACGCACcgaatttagacaacgctgtcaccgcgcacaa
gi|77267 : AAA-GGCCCGGTCGC-A--CC-G-TC---C-GAA-CTT-----TG-TTGG-AGCGTTC-CT------G-aa
gi|77269 : AA-GGCCCGGTCAC-A--CC-G-CC---C-GGA-CTT-----TG-TTGG-AGCGTTC-CT------G-G-A-GC---GGTTG---AAA-AA--AATTA--AT-CTCCGCTCGTTA-CC-GTTCAC
gi|77270 : AA-GGCCCGGAAAC-A--CC-G-CC---C-GAA-CTT-----TG-TTGG-AGCGTTC-CT------G-G-A-GC---GG-TG---AAA-AA--AATTC--AT-CTCCGCTCGTCA-CC-GTTCAC
gi|77271 : AA-GGCCCGGTCAC-A--CC-G-CC---C-GAT-CTT-----T----------GTT----------G-G-A-GC---GG-TG---AAT-AA--AATTC--AT-CCCCGCTCGTTA-CC-GTTCAC
gi|77274 : AA-GGCCCGGTCAC-A--CC-G-CCGCCC-GAA-TTTGTTTTTT-TTGGTAGCGTTT-CC------T-G-A-GC---GG-TG---AAACAA--AATGC--AT-C-CCGCTCGTCA-CCAGTTCAC
gi|77273 : AA-GGCC-GGTCACTA--CC-G-CC---C-GAAACTT-----TG-TTG--AGCGTTCTCT------G-G-AAGC---GA-TG---AAA-AA--AAATC--AT-CTCCG-TCGTTA-CG-ATTCA
gi|77275 : AA-GGCC-GATCAC-A--CC-G-CC---C-GAA-ATT-----TTGTTGG-CGTGTTC-CTG-----G-G-A-AC---GA-TA---AAA-AA--A--TC--GT-C-CCGCTCGTTA-CC-TTTCAC
gi|77272 : AA-GACCCGGTCAC-G--CC-G-CC---C-GAA-CTT-----TG-TTGG-AGCGTTC-CT------T-C-A-AC---GG-GG-----C-CG--AATTT--AGACAACGCTCGTCA-CC-GCGCAC
gi|77268 : AA-GGCCCGGTAAC-A--CC-G-CC---C-GAA-CGG-----TG-TTGG-AGCGTTC-CT------aa
gi|77276 : AA-GGCCCG-TCAC-C--AC-G-CC---C-G-A-CTT-----TG-TTGG-ACGGTTC-CT------T-C-A-AC---GG-TG-----C-CG--AATTT--AGACAACGCTTGTCA-CC-GCGCAC
gi|77277 : A-GGCCCGGTCAC-A---C-G-CC---C-GAA--TT-----TG-TTGG-AGCGTTC-TT-------------C---AA-CG---AAGCCA--AATTTAGAC-ATACGCTCGTCA-CC-aa
gi|77278 : CCGCCCAC-A--CC-G-CC---C-GAA-CTT-----TG-TTGG-AGCGTTC-CT------T-C-A-AC---GG-TG-----T-CG--AATTT--AGACAACGCTCGTCA-CC-GCGCACcggcacaa
gi|77279 : CCGCCCAC-A--CCCG-CC---CCGAA-CTT-----TG-TTGG-AGCGTTC-CT------T-C-A-AC---GGCTG---TAT-CG--AATTT--AGACAACGCTCGTCA-CC-aa
gi|77281 : CGGTCAC-A--CC-G-CC---C-GAA-CTT-----TG-TTGG-AGCA-TC-CT------G-G-A-GC---GG-TGAAAAAA-AA--AAGTC--AC-CCCCGCTCGTTA-CC-ATTCACcgcaaaa
gi|77280 : CGGTCAC-A--C--G-CC-----AAA-CTT-----GT-T-GG-AGCGTTC-CT------G-A-A-GC---GG-TG---AAA-AT--AAAAC--AT-CCCCGCTCGTTA-CC-GTTCAC
gi|77282 : C-A--CC-G-CC---C-GAA-CGG-----TG-TTGG-AGCGTTC-CT------T-C-A-AC---GG-TG-----C-CG--AATTT--AGACAACGCTCGTCA-CC-GCGCAC
Alignments
lowQualScore : 11111 22222222 111
lowQualScore : 1 1 444 2 2 1 2 2 444444 1 1 22222 3 11111111 22 999 444 1 1 0
lowQualScore : . . ... . . . . . ...... . . ..... . ........ .. ... ... . . .
lowQualScore : 7 4 333 8 8 4 8 8 000000 4 4 44444 0 55555555 11 111 999 6 6 1
consensus : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-N-N-AGCGG-TG---AA-NNA--AATTCA-NACNN-CGCTCGTCA-CC-GTTCAC
Reference ( family-569 ) : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-G-G-AGCGG-TG---AA-NAA--AATTCA-NACNC-CGCTCGTCA-CC-GTTCAC
gi|77254 : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTT------TTGG-AGCGTTC-CT-G-G-AGCGG-TG---AA-AAA--AATTCA-T-CTC-CGCTCGTTA-CC-GTTCAC
gi|77255 : TAAA-GGCCCGGTCAC-A---CC-T-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-G-G-AGCGG-TG---AA-AAA--AATTCG-T-CTC-CGCTCGTTA-CC-GTTCAC
gi|77256 : TAAA-GGCC-GGTCAC-A---CC-G-TC-C-G-CACTTTG------TTGG-AGCG-TC-CT-G-GCAGCGG-TG---AA-AAATTAATTCG-T-CTC-CGCTCGTTAGCC-GTTCAC
gi|77257 : TAAA-GGCCCG-TCAC-ATG-CC-G-CC-CCG-AACGTTG------TTG--AGCGTTC-CT-T-C-AACGG-TG------CCG--AATTTA-GACAA-CGCTCGTCA-CC-GCGCACa
gi|77258 : TAAA-GGCCCGGTCAC-A---CC-AACC-C-G-AACTTTG------TTGG-AGCGTTC-CT-GTA-AGCGG-TGTGAAA-AAA--AAATCA-T--CT-CGCTTGTTA-CC-GTTCACaa
gi|77259 : TAAA-GGCCCGGTCAC-A---CC-G-CC-G-G-AACTTTG------TTGG-AACGTTC-CT-G-G-AGCGG-TG---AG-AAA--TGTCCA-T-CTC-CGATCATCA-CC-GTTCAC
gi|77260 : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACGTTG------TTGG-AGCGTTC-CT-T-C-AACGG-TG------CCG--AATTTA-GACAA-CGCTCGTTA-CC-
gi|77261 : TAAA-GGTCTGGTCAC-A---CC-G-CC-C-G-AACATTG------TTGG-AGCGTTC-CT-G-G-AGCGG-TG---AA-AAA--Accaca
gi|77262 : TAAA-GGCCCGGTCAC-A---CC-A-CC-C-G-AACTTTT------ATGG-AGCGGTC-CT-T-C-AACGG-
gi|77263 : TAAA-GGTCCGTTCAC-A---CC-G-CC-C-G-AACGTTG------TTGG-AGCATTC-CT-T-C-AATGG-TG------TCA--AATTTA-GACAA-CGTTCGTCA-CC-GCGCAC
gi|77264 : TAAA-GGCCCGGTCAC-A---CC-GACC-C-C-ACGGTTG------TTGG-AGCTTCC-CT-T-C-A-CGG-TG-------CG--AATTTA-GACAA-CGCT-GTCA-CC-GCGCACaa
gi|77265 : TAAATGGCCCGG-CAC-A---CCCG-CCTC-G-CACTTTG------TTGG-AGCGGTC-CT-T-C-AACCG--G---AG-CCA--AATTCAGAAGAA-CGCTCGTCA-CC-aa
gi|77266 : AAA-GGCCCGATCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-T-C-AACGG-GG------CCA--AATTTA-GACAA-CGCTCGTCA-CC-ACGCACcgcacaa
gi|77267 : AAA-GGCCCGGTCGC-A---CC-G-TC-C-G-AACTTTG------TTGG-AGCGTTC-CT-G-aa
gi|77268 : AA-GGCCCGGTAAC-A---CC-G-CC-C-G-AACGGTG------TTGG-AGCGTTC-CT-
gi|77269 : AA-GGCCCGGTCAC-A---CC-G-CC-C-G-GACTTTG------TTGG-AGCGTTC-CT-G-G-AGCGGTTG---AA-AAA--AATTAA-T-CTC-CGCTCGTTA-CC-GTTCAC
gi|77270 : AA-GGCCCGGAAAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-G-G-AGCGG-TG---AA-AAA--AATTCA-T-CTC-CGCTCGTCA-CC-GTTCAC
gi|77271 : AA-GGCCCGGTCAC-A---CC-G-CC-C-G-ATCTTTG------T-------------T-G-G-AGCGG-TG---AA-TAA--AATTCA-T-CCC-CGCTCGTTA-CC-GTTCAC
gi|77272 : AA-GACCCGGTCAC-G---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-T-C-AACGG-GG------CCG--AATTTA-GACAA-CGCTCGTCA-CC-GCGCAC
gi|77273 : AA-GGCC-GGTCACTA---CC-G-CC-C-GAAACTTTG------TT-G-AGCGTTCTCT-G-GAAGCGA-TG---AA-AAA--AAATCA-T-CTC-CG-TCGTTA-CG-ATTCAaa
gi|77274 : AA-GGCCCGGTCAC-ACCGCC-G-CC-C-G-AA-TTTGTTTTTTTTGGTAGCGTTT-CC-T-G-AGCGG-TGA--AA-CAA--AATGCA-T--CC-CGCTCGTCA-CCAGTTCAC
gi|77275 : AA-GGCC-GATCAC-A---CC-G-CC-C-GAAATTTTG------TTGG-CGTGTTC-CTGG-G-AACGA-TA---AA-AAA--A--TCG-T--CC-CGCTCGTTA-CC-TTTCAC
gi|77276 : AA-GGCCCG-TCAC-C---AC-G-CC-C-G-A-CTTTG------TTGG-ACGGTTC-CT-T-C-AACGG-TG------CCG--AATTTA-GACAA-CGCTTGTCA-CC-GCGCAC
gi|77277 : A-GGCCCGGTCAC-A---C--G-CC-C-G-AA-TTTG------TTGG-AGCGTTC-TT-------CAA-CG---AAGCCA--AATTTA-GACATACGCTCGTCA-CC-aa
gi|77278 : CCGCCCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-T-C-AACGG-TG------TCG--AATTTA-GACAA-CGCTCGTCA-CC-GCGCACcggcacaa
gi|77279 : CCGCCCAC-A---CCCG-CC-CCG-AACTTTG------TTGG-AGCGTTC-CT-T-C-AACGGCTG---TA-TCG--AATTTA-GACAA-CGCTCGTCA-CC-aa
gi|77280 : CGGTCAC-A---C--G-CC---A-AACTT-G------TTGG-AGCGTTC-CT-G-A-AGCGG-TG---AA-AAT--AAAACA-T-CCC-CGCTCGTTA-CC-GTTCACcgcaaaa
gi|77281 : CGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCA-TC-CT-G-G-AGCGG-TGAAAAA-AAA--AAGTCA-C-CCC-CGCTCGTTA-CC-ATTCAC
gi|77282 : C-A---CC-G-CC-C-G-AACGGTG------TTGG-AGCGTTC-CT-T-C-AACGG-TG------CCG--AATTTA-GACAA-CGCTCGTCA-CC-GCGCAC
Alignments
lowQualScore : 1111111 111
lowQualScore : 1 1 444 2 2 1 2 2 444444 1 1 777 3 7777777 22 777 333 1 1 0
lowQualScore : . . ... . . . . . ...... . . ... . ....... .. ... ... . . .
lowQualScore : 7 4 333 8 8 4 8 8 000000 4 4 222 0 9999999 11 111 666 6 6 1
consensus : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-TCAGCGG-TG---AANCG--AATTCA-NAC-NNCGCTCGTCA-CC-GTTCAC
Reference ( family-569 ) : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-NNAGCGG-TG---AANNA--AATTCA-NAC-NNCGCTCGTCA-CC-GTTCAC
gi|77254 : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTT------TTGG-AGCGTTC-CT-GGAGCGG-TG---AAAAA--AATTCA-T-C-TCCGCTCGTTA-CC-GTTCAC
gi|77255 : TAAA-GGCCCGGTCAC-A---CC-T-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-GGAGCGG-TG---AAAAA--AATTCG-T-C-TCCGCTCGTTA-CC-GTTCAC
gi|77256 : TAAA-GGCC-GGTCAC-A---CC-G-TC-C-G-CACTTTG------TTGG-AGCGTCC-TG-GCAGCGG-TG---AAAAATTAATTCG-T-C-TCCGCTCGTTAGCC-GTTCAC
gi|77257 : TAAA-GGCCCG-TCAC-ATG-CC-G-CC-CCG-AACGTTG------TTG--AGCGTTC-CT-TCAACGG-TG-----CCG--AATTTA-GAC-AACGCTCGTCA-CC-GCGCACa
gi|77258 : TAAA-GGCCCGGTCAC-A---CC-AACC-C-G-AACTTTG------TTGG-AGCGTTC-CTGTAAGCGG-TGTGAAAAAA--AAATCA-T---CTCGCTTGTTA-CC-GTTCACaa
gi|77259 : TAAA-GGCCCGGTCAC-A---CC-G-CC-G-G-AACTTTG------TTGG-AACGTTC-CT-GGAGCGG-TG---AGAAA--TGTCCA-T-C-TCCGATCATCA-CC-GTTCAC
gi|77260 : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACGTTG------TTGG-AGCGTTC-CT-TCAACGG-TG-----CCG--AATTTA-GAC-AACGCTCGTTA-CC-
gi|77261 : TAAA-GGTCTGGTCAC-A---CC-G-CC-C-G-AACATTG------TTGG-AGCGTTC-CT-GGAGCGG-TG---AAAAA--Accaca
gi|77262 : TAAA-GGCCCGGTCAC-A---CC-A-CC-C-G-AACTTTT------ATGG-AGCGGTC-CT-TCAACGG-
gi|77263 : TAAA-GGTCCGTTCAC-A---CC-G-CC-C-G-AACGTTG------TTGG-AGCATTC-CT-TCAATGG-TG-----TCA--AATTTA-GAC-AACGTTCGTCA-CC-GCGCAC
gi|77264 : TAAA-GGCCCGGTCAC-A---CC-GACC-C-C-ACGGTTG------TTGG-AGCTTCC-CT-TCA-CGG-TG------CG--AATTTA-GAC-AACGCT-GTCA-CC-GCGCACaa
gi|77265 : TAAATGGCCCGG-CAC-A---CCCG-CCTC-G-CACTTTG------TTGG-AGCGGTC-CT-TCAACCG--G---AGCCA--AATTCAGAAG-AACGCTCGTCA-CC-aa
gi|77266 : AAA-GGCCCGATCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-TCAACGG-GG-----CCA--AATTTA-GAC-AACGCTCGTCA-CC-ACGCACcgcacaa
gi|77267 : AAA-GGCCCGGTCGC-A---CC-G-TC-C-G-AACTTTG------TTGG-AGCGTTC-CT-aa
gi|77268 : AA-GGCCCGGTAAC-A---CC-G-CC-C-G-AACGGTG------TTGG-AGCGTTC-CT-g
gi|77269 : AA-GGCCCGGTCAC-A---CC-G-CC-C-G-GACTTTG------TTGG-AGCGTTC-CT-GGAGCGGTTG---AAAAA--AATTAA-T-C-TCCGCTCGTTA-CC-GTTCAC
gi|77270 : AA-GGCCCGGAAAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-GGAGCGG-TG---AAAAA--AATTCA-T-C-TCCGCTCGTCA-CC-GTTCAC
gi|77271 : AA-GGCCCGGTCAC-A---CC-G-CC-C-G-ATCTTTG------TTGG--------------AGCGG-TG---AATAA--AATTCA-T-C-CCCGCTCGTTA-CC-GTTCAC
gi|77272 : AA-GACCCGGTCAC-G---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-TCAACGG-GG-----CCG--AATTTA-GAC-AACGCTCGTCA-CC-GCGCAC
gi|77273 : AA-GGCC-GGTCACTA---CC-G-CC-C-GAAACTTTG------TT-G-AGCGTTCTCTGGAAGCGA-TG---AAAAA--AAATCA-T-C-TCCG-TCGTTA-CG-ATTCAaa
gi|77274 : AA-GGCCCGGTCAC-ACCGCC-G-CC-C-G-AA-TTTGTTTTTTTTGGTAGCGTTT-CC-TGAGCGG-TG---AAACA--AAAT-G-CAT-CCCGCTCGTCA-CCAGTTCAC
gi|77275 : AA-GGCC-GATCAC-A---CC-G-CC-C-GAAATTTTG------TTGG-CGTGTTC-CTGGGAACGA-TA---AAAAA--A--TCG-T---CCCGCTCGTTA-CC-TTTCAC
gi|77276 : AA-GGCCCG-TCAC-C---AC-G-CC-C-G-A-CTTTG------TTGG-ACGGTTC-CT-TCAACGG-TG-----CCG--AATTTA-GAC-AACGCTTGTCA-CC-GCGCAC
gi|77277 : A-GGCCCGGTCAC-A---C--G-CC-C-G-AA-TTTG------TTGG-AGCGTT--CT-TCAACG---A---AGCCA--AATTTA-GACATACGCTCGTCA-CC-aa
gi|77278 : CCGCCCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTC-CT-TCAACGG-TG-----TCG--AATTTA-GAC-AACGCTCGTCA-CC-GCGCACcggcacaa
gi|77279 : CCGCCCAC-A---CCCG-CC-CCG-AACTTTG------TTGG-AGCGTTC-CT-TCAACGGCTG---TATCG--AATTTA-GAC-AACGCTCGTCA-CC-aa
gi|77280 : CGGTCAC-A---C--G-CC---A-AACTT-G------TTGG-AGCGTTC-CT-GAAGCGG-TG---AAAAT--AAAACA-T-C-CCCGCTCGTTA-CC-GTTCACcgcaaaa
gi|77281 : CGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCA-TC-CT-GGAGCGG-TGAAAAAAAA--AAGTCA-C-C-CCCGCTCGTTA-CC-ATTCAC
gi|77282 : C-A---CC-G-CC-C-G-AACGGTG------TTGG-AGCGTTC-CT-TCAACGG-TG-----CCG--AATTTA-GAC-AACGCTCGTCA-CC-GCGCAC
Alignments
lowQualScore : 22222222 111
lowQualScore : 1 1 444 2 2 1 2 2 444444 1 77777 3 44444444 222 777 333 1 1 0
lowQualScore : . . ... . . . . . ...... . ..... . ........ ... ... ... . . .
lowQualScore : 7 4 333 8 8 4 8 8 000000 4 66666 0 99999999 888 111 666 6 6 1
consensus : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAGCGG-TG---AANCGAA---TTCA-NAC-NNCGCTCGTCA-CC-GTTCAC
Reference ( family-569 ) : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAGCGG-TG---AANCGAA---TTCA-NAC-NNCGCTCGTCA-CC-GTTCAC
gi|77254 : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTT------TTGG-AGCGTTCCT-G--GAGCGG-TG---AAAAAAA---TTCA-T-C-TCCGCTCGTTA-CC-GTTCAC
gi|77255 : TAAA-GGCCCGGTCAC-A---CC-T-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-G--GAGCGG-TG---AAAAAAA---TTCG-T-C-TCCGCTCGTTA-CC-GTTCAC
gi|77256 : TAAA-GGCC-GGTCAC-A---CC-G-TC-C-G-CACTTTG------TTGG-AGCGTCCTG-G--CAGCGG-TGAA-AAATTAA---TTCG-T-C-TCCGCTCGTTAGCC-GTTCAC
gi|77257 : TAAA-GGCCCG-TCAC-ATG-CC-G-CC-CCG-AACGTTG------TTG--AGCGTTCCT-T--CAACGG-TG-----CCGAA---TTTA-GAC-AACGCTCGTCA-CC-GCGCACa
gi|77258 : TAAA-GGCCCGGTCAC-A---CC-AACC-C-G-AACTTTG------TTGG-AGCGTTCCTGT--AAGCGG-TGTGAAAAAAAA---ATCA-T---CTCGCTTGTTA-CC-GTTCACaa
gi|77259 : TAAA-GGCCCGGTCAC-A---CC-G-CC-G-G-AACTTTG------TTGG-AACGTTCCT-G--GAGCGG-TG---A---GAAATGTCCA-T-C-TCCGATCATCA-CC-GTTCAC
gi|77260 : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACGTTG------TTGG-AGCGTTCCT-T--CAACGG-TG-----CCGAA---TTTA-GAC-AACGCTCGTTA-CC-
gi|77261 : TAAA-GGTCTGGTCAC-A---CC-G-CC-C-G-AACATTG------TTGG-AGCGTTCCT-G--GAGCGG-TG---AAccaca
gi|77262 : TAAA-GGCCCGGTCAC-A---CC-A-CC-C-G-AACTTTT------ATGG-AGCGGTCCT-T--CAACGG-aaaa
gi|77263 : TAAA-GGTCCGTTCAC-A---CC-G-CC-C-G-AACGTTG------TTGG-AGCATTCCT-T--CAATGG-TG-----TCAAA---TTTA-GAC-AACGTTCGTCA-CC-GCGCAC
gi|77264 : TAAA-GGCCCGGTCAC-A---CC-GACC-C-C-ACGGTTG------TTGG-AGCTTCCCT-T--CA-CGG-TG------CGAA---TTTA-GAC-AACGCT-GTCA-CC-GCGCACaa
gi|77265 : TAAATGGCCCGG-CAC-A---CCCG-CCTC-G-CACTTTG------TTGG-AGCGGTCCT-T--CAACCG--G---AGCCAAA---TTCAGAAG-AACGCTCGTCA-CC-aa
gi|77266 : AAA-GGCCCGATCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAACGG-GG-----CCAAA---TTTA-GAC-AACGCTCGTCA-CC-ACGCACcgcacaa
gi|77267 : AAA-GGCCCGGTCGC-A---CC-G-TC-C-G-AACTTTG------TTGG-AGCGTTCCT-aa
gi|77268 : AA-GGCCCGGTAAC-A---CC-G-CC-C-G-AACGGTG------TTGG-AGCGTTCCT-g
gi|77269 : AA-GGCCCGGTCAC-A---CC-G-CC-C-G-GACTTTG------TTGG-AGCGTTCCT-G--GAGCGGTTG---AAAAAAA---TTAA-T-C-TCCGCTCGTTA-CC-GTTCAC
gi|77270 : AA-GGCCCGGAAAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-G--GAGCGG-TG---AAAAAAA---TTCA-T-C-TCCGCTCGTCA-CC-GTTCAC
gi|77271 : AA-GGCCCGGTCAC-A---CC-G-CC-C-G-ATCTTTG------TTGG---------------AGCGG-TG---AATAAAA---TTCA-T-C-CCCGCTCGTTA-CC-GTTCAC
gi|77272 : AA-GACCCGGTCAC-G---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAACGG-GG-----CCGAA---TTTA-GAC-AACGCTCGTCA-CC-GCGCAC
gi|77273 : AA-GGCC-GGTCACTA---CC-G-CC-C-GAAACTTTG------TT-G-AGCGTTCTC-TGGAAGCGA-TG---AAAAAAA---ATCA-T-C-TCCG-TCGTTA-CG-ATTCAaa
gi|77274 : AA-GGCCCGGTCAC-ACCGCC-G-CC-C-G-AA-TTTGTTTTTTTTGGTAGCGTTTCC-T--GAGCGG-TG---AAACAAA---AT-G-CAT-CCCGCTCGTCA-CCAGTTCAC
gi|77275 : AA-GGCC-GATCAC-A---CC-G-CC-C-GAAATTTTG------TTGG-CGTGTTCCTGG--GAACGA-TA---AAA--AA---ATCG-T---CCCGCTCGTTA-CC-TTTCAC
gi|77276 : AA-GGCCCG-TCAC-C---AC-G-CC-C-G-A-CTTTG------TTGG-ACGGTTCCT-T--CAACGG-TG-----CCGAA---TTTA-GAC-AACGCTTGTCA-CC-GCGCAC
gi|77277 : A-GGCCCGGTCAC-A---C--G-CC-C-G-AA-TTTG------TTGG-AGCGTT-CT-T--CAACG---A---AGCCAAA---TTTA-GACATACGCTCGTCA-CC-aa
gi|77278 : CCGCCCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAACGG-TG-----TCGAA---TTTA-GAC-AACGCTCGTCA-CC-GCGCACcggcacaa
gi|77279 : CCGCCCAC-A---CCCG-CC-CCG-AACTTTG------TTGG-AGCGTTCCT-T--CAACGGCTG---TATCGAA---TTTA-GAC-AACGCTCGTCA-CC-aa
gi|77280 : CGGTCAC-A---C--G-CC---A-AACTT-G------TTGG-AGCGTTCCT-G--AAGCGG-TG---AAAATAA---AACA-T-C-CCCGCTCGTTA-CC-GTTCACcgcaaaa
gi|77281 : CGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCA-TCCT-G--GAGCGG-TGAAAAAAAAAA---GTCA-C-C-CCCGCTCGTTA-CC-ATTCAC
gi|77282 : C-A---CC-G-CC-C-G-AACGGTG------TTGG-AGCGTTCCT-T--CAACGG-TG-----CCGAA---TTTA-GAC-AACGCTCGTCA-CC-GCGCAC
Alignments
lowQualScore : 22222222 111
lowQualScore : 1 1 444 2 2 1 2 2 444444 1 77777 3 44444444 222 777 333 1 1 0
lowQualScore : . . ... . . . . . ...... . ..... . ........ ... ... ... . . .
lowQualScore : 7 4 333 8 8 4 8 8 000000 4 66666 0 99999999 888 111 666 6 6 1
consensus : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAGCGG-TG---AANCGAA---TTCA-NAC-NNCGCTCGTCA-CC-GTTCAC
Reference ( family-569 ) : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAGCGG-TG---AANCGAA---TTCA-NAC-NNCGCTCGTCA-CC-GTTCAC
gi|77254 : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTT------TTGG-AGCGTTCCT-G--GAGCGG-TG---AAAAAAA---TTCA-T-C-TCCGCTCGTTA-CC-GTTCAC
gi|77255 : TAAA-GGCCCGGTCAC-A---CC-T-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-G--GAGCGG-TG---AAAAAAA---TTCG-T-C-TCCGCTCGTTA-CC-GTTCAC
gi|77256 : TAAA-GGCC-GGTCAC-A---CC-G-TC-C-G-CACTTTG------TTGG-AGCGTCCTG-G--CAGCGG-TGAA-AAATTAA---TTCG-T-C-TCCGCTCGTTAGCC-GTTCAC
gi|77257 : TAAA-GGCCCG-TCAC-ATG-CC-G-CC-CCG-AACGTTG------TTG--AGCGTTCCT-T--CAACGG-TG-----CCGAA---TTTA-GAC-AACGCTCGTCA-CC-GCGCACa
gi|77258 : TAAA-GGCCCGGTCAC-A---CC-AACC-C-G-AACTTTG------TTGG-AGCGTTCCTGT--AAGCGG-TGTGAAAAAAAA---ATCA-T---CTCGCTTGTTA-CC-GTTCACaa
gi|77259 : TAAA-GGCCCGGTCAC-A---CC-G-CC-G-G-AACTTTG------TTGG-AACGTTCCT-G--GAGCGG-TG---A---GAAATGTCCA-T-C-TCCGATCATCA-CC-GTTCAC
gi|77260 : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACGTTG------TTGG-AGCGTTCCT-T--CAACGG-TG-----CCGAA---TTTA-GAC-AACGCTCGTTA-CC-
gi|77261 : TAAA-GGTCTGGTCAC-A---CC-G-CC-C-G-AACATTG------TTGG-AGCGTTCCT-G--GAGCGG-TG---AAccaca
gi|77262 : TAAA-GGCCCGGTCAC-A---CC-A-CC-C-G-AACTTTT------ATGG-AGCGGTCCT-T--CAACGG-aaaa
gi|77263 : TAAA-GGTCCGTTCAC-A---CC-G-CC-C-G-AACGTTG------TTGG-AGCATTCCT-T--CAATGG-TG-----TCAAA---TTTA-GAC-AACGTTCGTCA-CC-GCGCAC
gi|77264 : TAAA-GGCCCGGTCAC-A---CC-GACC-C-C-ACGGTTG------TTGG-AGCTTCCCT-T--CA-CGG-TG------CGAA---TTTA-GAC-AACGCT-GTCA-CC-GCGCACaa
gi|77265 : TAAATGGCCCGG-CAC-A---CCCG-CCTC-G-CACTTTG------TTGG-AGCGGTCCT-T--CAACCG--G---AGCCAAA---TTCAGAAG-AACGCTCGTCA-CC-aa
gi|77266 : AAA-GGCCCGATCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAACGG-GG-----CCAAA---TTTA-GAC-AACGCTCGTCA-CC-ACGCACcgcacaa
gi|77267 : AAA-GGCCCGGTCGC-A---CC-G-TC-C-G-AACTTTG------TTGG-AGCGTTCCT-aa
gi|77268 : AA-GGCCCGGTAAC-A---CC-G-CC-C-G-AACGGTG------TTGG-AGCGTTCCT-g
gi|77269 : AA-GGCCCGGTCAC-A---CC-G-CC-C-G-GACTTTG------TTGG-AGCGTTCCT-G--GAGCGGTTG---AAAAAAA---TTAA-T-C-TCCGCTCGTTA-CC-GTTCAC
gi|77270 : AA-GGCCCGGAAAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-G--GAGCGG-TG---AAAAAAA---TTCA-T-C-TCCGCTCGTCA-CC-GTTCAC
gi|77271 : AA-GGCCCGGTCAC-A---CC-G-CC-C-G-ATCTTTG------TTGG---------------AGCGG-TG---AATAAAA---TTCA-T-C-CCCGCTCGTTA-CC-GTTCAC
gi|77272 : AA-GACCCGGTCAC-G---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAACGG-GG-----CCGAA---TTTA-GAC-AACGCTCGTCA-CC-GCGCAC
gi|77273 : AA-GGCC-GGTCACTA---CC-G-CC-C-GAAACTTTG------TT-G-AGCGTTCTC-TGGAAGCGA-TG---AAAAAAA---ATCA-T-C-TCCG-TCGTTA-CG-ATTCAaa
gi|77274 : AA-GGCCCGGTCAC-ACCGCC-G-CC-C-G-AA-TTTGTTTTTTTTGGTAGCGTTTCC-T--GAGCGG-TG---AAACAAA---AT-G-CAT-CCCGCTCGTCA-CCAGTTCAC
gi|77275 : AA-GGCC-GATCAC-A---CC-G-CC-C-GAAATTTTG------TTGG-CGTGTTCCTGG--GAACGA-TA---AAA--AA---ATCG-T---CCCGCTCGTTA-CC-TTTCAC
gi|77276 : AA-GGCCCG-TCAC-C---AC-G-CC-C-G-A-CTTTG------TTGG-ACGGTTCCT-T--CAACGG-TG-----CCGAA---TTTA-GAC-AACGCTTGTCA-CC-GCGCAC
gi|77277 : A-GGCCCGGTCAC-A---C--G-CC-C-G-AA-TTTG------TTGG-AGCGTT-CT-T--CAACG---A---AGCCAAA---TTTA-GACATACGCTCGTCA-CC-aa
gi|77278 : CCGCCCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAACGG-TG-----TCGAA---TTTA-GAC-AACGCTCGTCA-CC-GCGCACcggcacaa
gi|77279 : CCGCCCAC-A---CCCG-CC-CCG-AACTTTG------TTGG-AGCGTTCCT-T--CAACGGCTG---TATCGAA---TTTA-GAC-AACGCTCGTCA-CC-aa
gi|77280 : CGGTCAC-A---C--G-CC---A-AACTT-G------TTGG-AGCGTTCCT-G--AAGCGG-TG---AAAATAA---AACA-T-C-CCCGCTCGTTA-CC-GTTCACcgcaaaa
gi|77281 : CGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCA-TCCT-G--GAGCGG-TGAAAAAAAAAA---GTCA-C-C-CCCGCTCGTTA-CC-ATTCAC
gi|77282 : C-A---CC-G-CC-C-G-AACGGTG------TTGG-AGCGTTCCT-T--CAACGG-TG-----CCGAA---TTTA-GAC-AACGCTCGTCA-CC-GCGCAC
blockSeqs : T T CCG C A T C A TTTTTT T TGGA T TGAAAAAA ATG GAA ATA G A
blockSeqs : . . TG C A . C A . . GTA C AAAAAAAA . GA TC . .
blockSeqs : . . . . . . . . . . GGG . AAAAATT . GA TC . .
blockSeqs : . . . . . . . . . . GG . AAAAA . GA AA . .
blockSeqs : . . . . . . . . . . GC . AGCCA . GA CT . .
blockSeqs : . . . . . . . . . . TC . AAAAA . GA TC . .
blockSeqs : . . . . . . . . . . GG . AAAAA . GA AA . .
blockSeqs : . . . . . . . . . . TC . AATAA . CA AA . .
blockSeqs : . . . . . . . . . . GG . AAAAA . GA AA . .
blockSeqs : . . . . . . . . . . TC . AAACA . GA AA . .
blockSeqs : . . . . . . . . . . TC . AGCCA . GA AA . .
blockSeqs : . . . . . . . . . . TC . TATCG . GA TC . .
blockSeqs : . . . . . . . . . . TC . AAAAT . GA TC . .
blockSeqs : . . . . . . . . . . TC . CCG . T CC . .
blockSeqs : . . . . . . . . . . GG . CCG . T AA . .
blockSeqs : . . . . . . . . . . GG . TCA . T TC . .
blockSeqs : . . . . . . . . . . TC . CCA . T CC . .
blockSeqs : . . . . . . . . . . TG . CCG . T CC . .
blockSeqs : . . . . . . . . . . TC . AAA . T AA . .
blockSeqs : . . . . . . . . . . TC . CCG . T AA . .
blockSeqs : . . . . . . . . . . TC . TCG . T AA . .
blockSeqs : . . . . . . . . . . TC . CCG . T CC . .
blockSeqs : . . . . . . . . . . GA . AG . T CC . .
blockSeqs : . . . . . . . . . GG . CG . C AA . .
blockSeqs : . . . . . . . . . TC .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . .
blockSeqs : . . . . . . . . .
blockSeqCons : NA*
originalCons : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAGCGG-TG---AANCGAA---TTCA-NAC-NNCGCTCGTCA-CC-GTTCAC
finalCons : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAGCGG-TG---AANCGAA---TTCANA-C-NNCGCTCGTCA-CC-GTTCAC
Alignments
lowQualScore : 22222222 111
lowQualScore : 1 1 444 2 2 1 2 2 444444 1 77777 3 44444444 222 777 333 1 1 0
lowQualScore : . . ... . . . . . ...... . ..... . ........ ... ... ... . . .
lowQualScore : 7 4 333 8 8 4 8 8 000000 4 66666 0 99999999 888 111 666 6 6 1
consensus : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAGCGG-TG---AANCGAA---TTCA-NAC-NNCGCTCGTCA-CC-GTTCAC
Reference ( family-569 ) : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAGCGG-TG---AANCGAA---TTCA-NAC-NNCGCTCGTCA-CC-GTTCAC
gi|77254 : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACTTTT------TTGG-AGCGTTCCT-G--GAGCGG-TG---AAAAAAA---TTCA-T-C-TCCGCTCGTTA-CC-GTTCAC
gi|77255 : TAAA-GGCCCGGTCAC-A---CC-T-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-G--GAGCGG-TG---AAAAAAA---TTCG-T-C-TCCGCTCGTTA-CC-GTTCAC
gi|77256 : TAAA-GGCC-GGTCAC-A---CC-G-TC-C-G-CACTTTG------TTGG-AGCGTCCTG-G--CAGCGG-TGAA-AAATTAA---TTCG-T-C-TCCGCTCGTTAGCC-GTTCAC
gi|77257 : TAAA-GGCCCG-TCAC-ATG-CC-G-CC-CCG-AACGTTG------TTG--AGCGTTCCT-T--CAACGG-TG-----CCGAA---TTTA-GAC-AACGCTCGTCA-CC-GCGCACa
gi|77258 : TAAA-GGCCCGGTCAC-A---CC-AACC-C-G-AACTTTG------TTGG-AGCGTTCCTGT--AAGCGG-TGTGAAAAAAAA---ATCA-T---CTCGCTTGTTA-CC-GTTCACaa
gi|77259 : TAAA-GGCCCGGTCAC-A---CC-G-CC-G-G-AACTTTG------TTGG-AACGTTCCT-G--GAGCGG-TG---A---GAAATGTCCA-T-C-TCCGATCATCA-CC-GTTCAC
gi|77260 : TAAA-GGCCCGGTCAC-A---CC-G-CC-C-G-AACGTTG------TTGG-AGCGTTCCT-T--CAACGG-TG-----CCGAA---TTTA-GAC-AACGCTCGTTA-CC-
gi|77261 : TAAA-GGTCTGGTCAC-A---CC-G-CC-C-G-AACATTG------TTGG-AGCGTTCCT-G--GAGCGG-TG---AAccaca
gi|77262 : TAAA-GGCCCGGTCAC-A---CC-A-CC-C-G-AACTTTT------ATGG-AGCGGTCCT-T--CAACGG-aaaa
gi|77263 : TAAA-GGTCCGTTCAC-A---CC-G-CC-C-G-AACGTTG------TTGG-AGCATTCCT-T--CAATGG-TG-----TCAAA---TTTA-GAC-AACGTTCGTCA-CC-GCGCAC
gi|77264 : TAAA-GGCCCGGTCAC-A---CC-GACC-C-C-ACGGTTG------TTGG-AGCTTCCCT-T--CA-CGG-TG------CGAA---TTTA-GAC-AACGCT-GTCA-CC-GCGCACaa
gi|77265 : TAAATGGCCCGG-CAC-A---CCCG-CCTC-G-CACTTTG------TTGG-AGCGGTCCT-T--CAACCG--G---AGCCAAA---TTCAGAAG-AACGCTCGTCA-CC-aa
gi|77266 : AAA-GGCCCGATCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAACGG-GG-----CCAAA---TTTA-GAC-AACGCTCGTCA-CC-ACGCACcgcacaa
gi|77267 : AAA-GGCCCGGTCGC-A---CC-G-TC-C-G-AACTTTG------TTGG-AGCGTTCCT-aa
gi|77268 : AA-GGCCCGGTAAC-A---CC-G-CC-C-G-AACGGTG------TTGG-AGCGTTCCT-g
gi|77269 : AA-GGCCCGGTCAC-A---CC-G-CC-C-G-GACTTTG------TTGG-AGCGTTCCT-G--GAGCGGTTG---AAAAAAA---TTAA-T-C-TCCGCTCGTTA-CC-GTTCAC
gi|77270 : AA-GGCCCGGAAAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-G--GAGCGG-TG---AAAAAAA---TTCA-T-C-TCCGCTCGTCA-CC-GTTCAC
gi|77271 : AA-GGCCCGGTCAC-A---CC-G-CC-C-G-ATCTTTG------TTGG---------------AGCGG-TG---AATAAAA---TTCA-T-C-CCCGCTCGTTA-CC-GTTCAC
gi|77272 : AA-GACCCGGTCAC-G---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAACGG-GG-----CCGAA---TTTA-GAC-AACGCTCGTCA-CC-GCGCAC
gi|77273 : AA-GGCC-GGTCACTA---CC-G-CC-C-GAAACTTTG------TT-G-AGCGTTCTC-TGGAAGCGA-TG---AAAAAAA---ATCA-T-C-TCCG-TCGTTA-CG-ATTCAaa
gi|77274 : AA-GGCCCGGTCAC-ACCGCC-G-CC-C-G-AA-TTTGTTTTTTTTGGTAGCGTTTCC-T--GAGCGG-TG---AAACAAA---AT-G-CAT-CCCGCTCGTCA-CCAGTTCAC
gi|77275 : AA-GGCC-GATCAC-A---CC-G-CC-C-GAAATTTTG------TTGG-CGTGTTCCTGG--GAACGA-TA---AAA--AA---ATCG-T---CCCGCTCGTTA-CC-TTTCAC
gi|77276 : AA-GGCCCG-TCAC-C---AC-G-CC-C-G-A-CTTTG------TTGG-ACGGTTCCT-T--CAACGG-TG-----CCGAA---TTTA-GAC-AACGCTTGTCA-CC-GCGCAC
gi|77277 : A-GGCCCGGTCAC-A---C--G-CC-C-G-AA-TTTG------TTGG-AGCGTT-CT-T--CAACG---A---AGCCAAA---TTTA-GACATACGCTCGTCA-CC-aa
gi|77278 : CCGCCCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCGTTCCT-T--CAACGG-TG-----TCGAA---TTTA-GAC-AACGCTCGTCA-CC-GCGCACcggcacaa
gi|77279 : CCGCCCAC-A---CCCG-CC-CCG-AACTTTG------TTGG-AGCGTTCCT-T--CAACGGCTG---TATCGAA---TTTA-GAC-AACGCTCGTCA-CC-aa
gi|77280 : CGGTCAC-A---C--G-CC---A-AACTT-G------TTGG-AGCGTTCCT-G--AAGCGG-TG---AAAATAA---AACA-T-C-CCCGCTCGTTA-CC-GTTCACcgcaaaa
gi|77281 : CGGTCAC-A---CC-G-CC-C-G-AACTTTG------TTGG-AGCA-TCCT-G--GAGCGG-TGAAAAAAAAAA---GTCA-C-C-CCCGCTCGTTA-CC-ATTCAC
gi|77282 : C-A---CC-G-CC-C-G-AACGGTG------TTGG-AGCGTTCCT-T--CAACGG-TG-----CCGAA---TTTA-GAC-AACGCTCGTCA-CC-GCGCAC