lowQualScore : 111 1 111 11
lowQualScore : 2 1 1 555555 1 1 1 1 33 11 888 2 33 11 2 1 1 99 6 0 111 44 7 6
lowQualScore : . . . ...... . . . . .. .. ... . .. .. . . . .. . . ... .. . .
lowQualScore : 7 3 3 222222 3 3 3 3 77 88 222 7 22 88 7 3 3 22 7 8 777 33 0 7
consensus : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTGTCT-ATTGGCCTTATA
Reference ( gi|21206 ) : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CCG--GC--TTG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTTTCT-ATTGGCCTTATA
gi|21207 : AAAAAT-T-CG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACA-AAACTTTCT-ATTGGCCTTATA
gi|21208 : AAAAAT-G-TG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTT-C--T--G-T-AAAT-ATGTTGATTTTT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACT-AAACTGTCT-ATTGGCCTTATA
gi|21209 : AAAAAT-TTCG-T------C-ACA-GAC-AGAAAT-G---CCG--G---TTG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTT-GTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTTTCT-ATTGGCCTTATA
gi|21210 : AAAAATTG-CG-TAATAAAT-AAA-G-C-AGAAAT-GG--CCG--GG--TTG-C--TCTG-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACAT-AATAAAATTT---CACCAAAACTGTCT-ATTGGCCTTACA
gi|21212 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CAG--GG--TTA-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATCAAT-----------------ACTGTCT-ATTGGCCTTATA
gi|21211 : AAAATT-G-CG-T------T-AAA-GAC-AGGAAA-GG---CG--GG--TTGTC--T--G-T-CAAT-ATGTT-ATTCCTTCATTTTGTTGAATGAAAGTACAT-AATAAAATTTCAACACCAAAACTGTCTAATTGGCCTT
gi|21214 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTG-C--T--G-T-AAAT-ATGTT
gi|21213 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTG-C--T--G-T-AAAT-ATGTT
gi|21215 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTG-C--T--G-T-AAAT-ATGCT
gi|21217 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CCA--GG--TTG-C--T--G-T-AAAT-ATGTT
gi|21216 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--TCG--GG--TTG-C--T--G-T-AAAT-ATGTT
gi|21218 : AAAAAT-G-TG-T------C-AAA-GAC-AGAAAT-GA--CCG--GG--TTG-C--T--G-T-AAAT-ATGTT
gi|21219 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTG-C--T--G-T-AAAT-A
gi|21220 : AAAAAT-G-CG-T------C-AAA-GTC-AGAAAT-GG--CCC--GG--TTG-C--T--G-T-AAAT-ATGTT
gi|21221 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTG-C--A--G-T-ATAT-ATGTT
gi|21222 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTG-C--T--T-T-AAAT-A-GTT
gi|21223 : AAAAAT---TG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTG-C--T--G-TAAAAT-ATGTT
gi|21224 : AAAAAT-G-CG-T------C-ACACGAC-AGAAAT-GG--CCG--GG--TTG-C--T--G-T-AAAT-ATTTCGGT
gi|21225 : AAAAAT-G-CG-T--------AAA-AAC-AGAAATAGG--CCG--GG--TTG-C--T--G-T-AAAT-ATGTT
gi|21226 : AAAAATTG-CG-T------C-AAA-GAC-AGAAAT-GG--CCGTAG---TTG-C--T--G-T-AAAT-ATGCT
gi|21227 : AAAAAT-G-CG-TT-----C-AAA-GAC--GAAAT-GG--CCG--GG--TTG-C--T--G-T--AAT-ATGTT
gi|21228 : AAAAAT-G-CGGT------C-AAA-GACCAGAAAT-GG--CTG--GG--TTG-C--T--GTT-AAAT-ATGTT
gi|21229 : AAAAA--G-CG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTG-C--T--G-T-ATAT-A-GTT
gi|21231 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CCT--GCGGTTG-CCTT--G-T-ATAT-ACGTT
gi|21232 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGCACCG--G----TGCC--T--G-T-AAAT-AGGTT
gi|21230 : AAAAAT-G-CG-T------CCAAA-GAC-AGAAAT-GG--GCG--GG--TTG-A--T--G-T-AAAT-A
gi|21233 : AAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTG-C--C--G-T-AAAT-ATGTTCAT
gi|21234 : AAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGCACTG--GT--GTG-C--T--GCT-AAAGAATGTCGGT
gi|21235 : AAAT-G-CG-T------C-AAA-GAC-AGAAAT-GG--CCG--GG--TTG-C--T--G-T-AAAT-ATGTT
gi|21236 : -G-CG-T------C-AAC-GAC-AGAAAT-GG--CCG--GG--TTG-CA-T--G-T-ATAT-ATGTT
Alignments
lowQualScore : 111 1
lowQualScore : 2 1 1 555555 1 1 1 1 2 1 2 1 1 33 11 2 1 1 77 5 7 000 1 0 5
lowQualScore : . . . ...... . . . . . . . . . .. .. . . . .. . . ... . . .
lowQualScore : 6 3 3 000000 3 3 3 3 6 3 6 3 3 11 88 6 3 3 99 7 9 000 4 7 7
consensus : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTGTCT-ATTGGCCTTATA
Reference ( family-532 ) : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTGTCT-ATTGGCCTTATA
gi|21206 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GCT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTTTCT-ATTGGCCTTATA
gi|21207 : AAAAAT-T-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACA-AAACTTTCT-ATTGGCCTTATA
gi|21208 : AAAAAT-G-TG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TT-C--T--G-T-AAAT-ATGTTGATTTTT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACT-AAACTGTCT-ATTGGCCTTATA
gi|21209 : AAAAAT-TTCG-T------C-ACA-GAC-AGAAAT-G-C-C-G-G-T-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTT-GTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTTTCT-ATTGGCCTTATA
gi|21210 : AAAAATTG-CG-TAATAAAT-AAA-G-C-AGAAAT-GGC-C-G-GGT-TG-C--TCTG-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACAT-AATAAAATTT---CACCAAAACTGTCT-ATTGGCCTTACA
gi|21211 : AAAATT-G-CG-T------T-AAA-GAC-AGGAAA-GG--C-G-GGT-TGTC--T--G-T-CAAT-ATGTT-ATTCCTTCATTTTGTTGAATGAAAGTACAT-AATAAAATTTCAACACCAAAACTGTCTAATTGGCCTT
gi|21212 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-A-G-GGT-TA-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATCAAT-----------------ACTGTCT-ATTGGCCTTATA
gi|21213 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21214 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21215 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGCT
gi|21216 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGT-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21217 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-A-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21218 : AAAAAT-G-TG-T------C-AAA-GAC-AGAAAT-GAC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21219 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-A
gi|21220 : AAAAAT-G-CG-T------C-AAA-GTC-AGAAAT-GGC-C-C-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21221 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--A--G-T-ATAT-ATGTT
gi|21222 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--T-T-AAAT-A-GTT
gi|21223 : AAAAAT---TG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-TAAAAT-ATGTT
gi|21224 : AAAAAT-G-CG-T------C-ACACGAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATTTCGGT
gi|21225 : AAAAAT-G-CG-T--------AAA-AAC-AGAAATAGGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21226 : AAAAATTG-CG-T------C-AAA-GAC-AGAAAT-GGC-C-GTAGT-TG-C--T--G-T-AAAT-ATGCT
gi|21227 : AAAAAT-G-CG-TT-----C-AAA-GAC--GAAAT-GGC-C-G-GGT-TG-C--T--G-T--AAT-ATGTT
gi|21228 : AAAAAT-G-CGGT------C-AAA-GACCAGAAAT-GGC-T-G-GGT-TG-C--T--GTT-AAAT-ATGTT
gi|21229 : AAAAA--G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-ATAT-A-GTT
gi|21230 : AAAAAT-G-CG-T------CCAAA-GAC-AGAAAT-GGG-C-G-GGT-TG-A--T--G-T-AAAT-A
gi|21231 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-CTGCGGT-TG-CCTT--G-T-ATAT-ACGTT
gi|21232 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGCAC-C-GGT-GC-C--T--G-T-AAAT-AGGTT
gi|21233 : AAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--C--G-T-AAAT-ATGTTCAT
gi|21234 : AAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGCAC-T-GGTGTG-C--T--GCT-AAAGAATGTCGGT
gi|21235 : AAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21236 : -G-CG-T------C-AAC-GAC-AGAAAT-GGC-C-G-GGT-TG-CA-T--G-T-ATAT-ATGTT
Alignments
lowQualScore : 111 1
lowQualScore : 2 1 1 555555 1 1 1 1 2 1 2 1 1 33 11 2 1 1 77 5 7 000 1 0 5
lowQualScore : . . . ...... . . . . . . . . . .. .. . . . .. . . ... . . .
lowQualScore : 6 3 3 000000 3 3 3 3 6 3 6 3 3 11 88 6 3 3 99 7 9 000 4 7 7
consensus : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTGTCT-ATTGGCCTTATA
Reference ( family-532 ) : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTGTCT-ATTGGCCTTATA
gi|21206 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GCT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTTTCT-ATTGGCCTTATA
gi|21207 : AAAAAT-T-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACA-AAACTTTCT-ATTGGCCTTATA
gi|21208 : AAAAAT-G-TG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TT-C--T--G-T-AAAT-ATGTTGATTTTT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACT-AAACTGTCT-ATTGGCCTTATA
gi|21209 : AAAAAT-TTCG-T------C-ACA-GAC-AGAAAT-G-C-C-G-G-T-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTT-GTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTTTCT-ATTGGCCTTATA
gi|21210 : AAAAATTG-CG-TAATAAAT-AAA-G-C-AGAAAT-GGC-C-G-GGT-TG-C--TCTG-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACAT-AATAAAATTT---CACCAAAACTGTCT-ATTGGCCTTACA
gi|21211 : AAAATT-G-CG-T------T-AAA-GAC-AGGAAA-GG--C-G-GGT-TGTC--T--G-T-CAAT-ATGTT-ATTCCTTCATTTTGTTGAATGAAAGTACAT-AATAAAATTTCAACACCAAAACTGTCTAATTGGCCTT
gi|21212 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-A-G-GGT-TA-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATCAAT-----------------ACTGTCT-ATTGGCCTTATA
gi|21213 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21214 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21215 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGCT
gi|21216 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGT-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21217 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-A-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21218 : AAAAAT-G-TG-T------C-AAA-GAC-AGAAAT-GAC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21219 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-A
gi|21220 : AAAAAT-G-CG-T------C-AAA-GTC-AGAAAT-GGC-C-C-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21221 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--A--G-T-ATAT-ATGTT
gi|21222 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--T-T-AAAT-A-GTT
gi|21223 : AAAAAT---TG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-TAAAAT-ATGTT
gi|21224 : AAAAAT-G-CG-T------C-ACACGAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATTTCGGT
gi|21225 : AAAAAT-G-CG-T--------AAA-AAC-AGAAATAGGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21226 : AAAAATTG-CG-T------C-AAA-GAC-AGAAAT-GGC-C-GTAGT-TG-C--T--G-T-AAAT-ATGCT
gi|21227 : AAAAAT-G-CG-TT-----C-AAA-GAC--GAAAT-GGC-C-G-GGT-TG-C--T--G-T--AAT-ATGTT
gi|21228 : AAAAAT-G-CGGT------C-AAA-GACCAGAAAT-GGC-T-G-GGT-TG-C--T--GTT-AAAT-ATGTT
gi|21229 : AAAAA--G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-ATAT-A-GTT
gi|21230 : AAAAAT-G-CG-T------CCAAA-GAC-AGAAAT-GGG-C-G-GGT-TG-A--T--G-T-AAAT-A
gi|21231 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-CTGCGGT-TG-CCTT--G-T-ATAT-ACGTT
gi|21232 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGCAC-C-GGT-GC-C--T--G-T-AAAT-AGGTT
gi|21233 : AAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--C--G-T-AAAT-ATGTTCAT
gi|21234 : AAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGCAC-T-GGTGTG-C--T--GCT-AAAGAATGTCGGT
gi|21235 : AAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21236 : -G-CG-T------C-AAC-GAC-AGAAAT-GGC-C-G-GGT-TG-CA-T--G-T-ATAT-ATGTT
blockSeqs : T T G AATAAA C C C A A T T G T CT CT T A A TC A G CAA A A
blockSeqs : T . . T . . . . A . C . . A . C . . . . G . A .
blockSeqs : . . . . . . . . . . . . . . . . . . . . G . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . C . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
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blockSeqs : . . . . . . . . . . . . . . . . . .
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blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqCons :
originalCons : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTGTCT-ATTGGCCTTATA
finalCons : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTGTCT-ATTGGCCTTATA
Alignments
lowQualScore : 111 1
lowQualScore : 2 1 1 555555 1 1 1 1 2 1 2 1 1 33 11 2 1 1 77 5 7 000 1 0 5
lowQualScore : . . . ...... . . . . . . . . . .. .. . . . .. . . ... . . .
lowQualScore : 6 3 3 000000 3 3 3 3 6 3 6 3 3 11 88 6 3 3 99 7 9 000 4 7 7
consensus : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTGTCT-ATTGGCCTTATA
Reference ( family-532 ) : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTGTCT-ATTGGCCTTATA
gi|21206 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GCT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTTTCT-ATTGGCCTTATA
gi|21207 : AAAAAT-T-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACA-AAACTTTCT-ATTGGCCTTATA
gi|21208 : AAAAAT-G-TG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TT-C--T--G-T-AAAT-ATGTTGATTTTT--ATTTTGTTGAATG-AAGTACATGAATAAAATTT---CACT-AAACTGTCT-ATTGGCCTTATA
gi|21209 : AAAAAT-TTCG-T------C-ACA-GAC-AGAAAT-G-C-C-G-G-T-TG-C--T--G-T-AAAT-ATGTTGATTTCT--ATTT-GTTGAATG-AAGTACATGAATAAAATTT---CACC-AAACTTTCT-ATTGGCCTTATA
gi|21210 : AAAAATTG-CG-TAATAAAT-AAA-G-C-AGAAAT-GGC-C-G-GGT-TG-C--TCTG-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACAT-AATAAAATTT---CACCAAAACTGTCT-ATTGGCCTTACA
gi|21211 : AAAATT-G-CG-T------T-AAA-GAC-AGGAAA-GG--C-G-GGT-TGTC--T--G-T-CAAT-ATGTT-ATTCCTTCATTTTGTTGAATGAAAGTACAT-AATAAAATTTCAACACCAAAACTGTCTAATTGGCCTT
gi|21212 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-A-G-GGT-TA-C--T--G-T-AAAT-ATGTTGATTTCT--ATTTTGTTGAATG-AAGTACATCAAT-----------------ACTGTCT-ATTGGCCTTATA
gi|21213 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21214 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21215 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGCT
gi|21216 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGT-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21217 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-A-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21218 : AAAAAT-G-TG-T------C-AAA-GAC-AGAAAT-GAC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21219 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-A
gi|21220 : AAAAAT-G-CG-T------C-AAA-GTC-AGAAAT-GGC-C-C-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21221 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--A--G-T-ATAT-ATGTT
gi|21222 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--T-T-AAAT-A-GTT
gi|21223 : AAAAAT---TG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-TAAAAT-ATGTT
gi|21224 : AAAAAT-G-CG-T------C-ACACGAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATTTCGGT
gi|21225 : AAAAAT-G-CG-T--------AAA-AAC-AGAAATAGGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21226 : AAAAATTG-CG-T------C-AAA-GAC-AGAAAT-GGC-C-GTAGT-TG-C--T--G-T-AAAT-ATGCT
gi|21227 : AAAAAT-G-CG-TT-----C-AAA-GAC--GAAAT-GGC-C-G-GGT-TG-C--T--G-T--AAT-ATGTT
gi|21228 : AAAAAT-G-CGGT------C-AAA-GACCAGAAAT-GGC-T-G-GGT-TG-C--T--GTT-AAAT-ATGTT
gi|21229 : AAAAA--G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-ATAT-A-GTT
gi|21230 : AAAAAT-G-CG-T------CCAAA-GAC-AGAAAT-GGG-C-G-GGT-TG-A--T--G-T-AAAT-A
gi|21231 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-CTGCGGT-TG-CCTT--G-T-ATAT-ACGTT
gi|21232 : AAAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGCAC-C-GGT-GC-C--T--G-T-AAAT-AGGTT
gi|21233 : AAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--C--G-T-AAAT-ATGTTCAT
gi|21234 : AAAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGCAC-T-GGTGTG-C--T--GCT-AAAGAATGTCGGT
gi|21235 : AAAT-G-CG-T------C-AAA-GAC-AGAAAT-GGC-C-G-GGT-TG-C--T--G-T-AAAT-ATGTT
gi|21236 : -G-CG-T------C-AAC-GAC-AGAAAT-GGC-C-G-GGT-TG-CA-T--G-T-ATAT-ATGTT