lowQualScore : 0 1 1 0 0 2222222222 1 0 55 0 2 11 0 11111 0 1 1 1 1
lowQualScore : . . . . . .......... . . .. . . .. . ..... . . . . .
lowQualScore : 6 1 1 5 5 2222222222 5 5 55 5 2 33 5 99999 5 0 0 1 1
consensus : CTGTG-AT-GA-CG-C-TA----------AA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
Reference ( gi|20112 ) : CTGTG-AT-GA-CG-C-TA----------AA-CTAGA-CA-TATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20114 : CTGTG-AT-GA-CG-C-TA----------AA-CTAGA-CA-TATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20113 : CTGTG-AT-GA-CG-C-TA----------AA-CTAGA-CA-TATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20117 : CTGTG-AT-GA-CA-C-TA----------AA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20115 : CTGTG-AT-GA-CG-C-TG----------AA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20119 : CTGTG-AT-GA-CA-C-TA----------AA-CTAGA-CA-CATTT-C-AT--AGGC-C-----CGT-GA-TG-ACG-CT-AAACTAGA
gi|20132 : CTGTG-AT-GA-CG-C-TA----------AA-CTAGA-CA-TATTT-CAAT--AGG--C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20136 : CTGTG-AT-GA-CG-C-TA----------AA-CTAGA-CA-CATTT-C-AT--AGGG-C-----AGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20118 : CTGTG-AT-GA-CA-C-TA----------AA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-GG-ACA-CT-AAACTAGA
gi|20116 : CTGTG-AT-AA-CG-C-TA----------AA-CTAGA-CA-TATTT-C-AT--AAGC-C-----TGT-GA-CG-ACA-CT-AAACTAG
gi|20111 : CTGTG-AT-GA-CG-C-TA----------AA-CTAGA-CA-TATTT-C-AT--AAGC-A-----TGT-GA-TG-ACA-CT-ATACTAGAC
gi|20138 : CTGTG-ATTGA-CG-C-TA----------AG-CT-GA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20135 : CTGTG-AT-GA-CA-C-TA----------AG-CTAGA-CA-CATTT-C-ATAAAGGC-C-----TGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20133 : CTGTG-AT-GA-CG-C-TG----------AA-CTAGA-CA-CATTT-C-AT--AGG--C-----TGT-GA-TG-ACA-CT-AAACTAGA
gi|20139 : CTGTG-AT-GA-CG-C-TA----------AG-CTAGA-CA-TATTT-C-TT--AGGT-T-----TGT-GA-TG-AAG-CT-AAACTAGAC
gi|20124 : CCGTG-AT-GA-CG-C-TA----------AA-CTAGA-AA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAAC
gi|20125 : CTGTG-AT-GA-CG-C-TA----------AA-CTAGA-CA-CATTC-C-AT--AGGG-C-----TGT-GA-TG-ACG-GG-AAACTAGAC
gi|20120 : CTGTG-AT-GA-CG-G-GA----------AA-CTAGA-CA-CCTTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20140 : CTGTG-AT-GA-CA-C-TA----------AA-CTAGA-AA-CATTT-C-AT--AGGC-C-----CGT-GA-TG-ACGCCT-AAACTAGA
gi|20127 : CTGTC-AT-GA-AG-C-TA----------AA-CTAGA-CA-TATTT-C-AT--AGGG-C-----TGT-GC-TG-ACG-CT-AAACTGGAC
gi|20126 : CTGTC-AT-GA-AG-C-TA----------AA-CTAGA-CA-TATTT-C-AT--AGGG-C-----TGT-GC-TG-ACG-CT-AAACTGGAC
gi|20137 : CTGTG-AT-GA-CG-G-TA----------AAACTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACT-GAC
gi|20130 : CTGTG-CT-GA-CG-C-TA----------AA-CTGGA-CA-CATTT-C-AT--AGGG-C-----AGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20121 : CTGTG-CT-GA-CG-C-TA----------AA-CTGGA-CA-CATTT-C-AT--AGGC-C-----TAT-GA-CG-ACA-CT-AAACTAG
gi|20143 : CTGTC-AT-GA-AG-C-TA----------AA-CTAGA-CA-ATTTT-C-AT--AGGG-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20131 : CTGTG-AT-GA-CA-C-TA----------AA-CCATA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-TG-ACG-CT-AAATTGGAC
gi|20123 : CCGTG-AT-TA-CG-C-TA----------AA-CTAGA-CA-CATTT-T-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACCATAC
gi|20144 : CTGTG-CT-GAACG-C-TA----------AA-CTATA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-TG-ACG-CC-AAACTAGAC
gi|20129 : CTATG-AT-GA-CG-C-TA----------AA-CTAGA-CA-CATTT-C-AT--ATGA-C-----TGT-CA-TG-AAG-CT-AAACTAGAC
gi|20128 : CTATG-AT-GA-CG-C-TA----------AA-CTAGA-CA-CATTT-C-AT--ATGA-C-----TGT-CA-TG-AAG-CT-AAACTAGAC
gi|20146 : CTGTG-AT-GA-CA-C-TA----------AA-CT-GA-CA-TATTT-T-AT--AGGC-------TGT-GA-TA-ACG-CT-AAGCTAGAC
gi|20142 : CTGTG-AT-GA-CC-C-TA----------AA-CTAGA-CA-CATTT-C-AT--ATGA-C-----TGT-CA-TG-AAG-CT-AAACTAGAC
gi|20147 : CTGTG-AT-GA-CA-C-TA----------AA-CTAGA-CA-CA-TT-C-AT--AGAC-A-----TGT-GA-TG-ACGTCT-AAACTAGA
gi|20178 : CTGTG-AT-GA-CA-C-TA----------AA-CTAGA-C
gi|20179 : ctaaactagacgcatttcataggcCTGTG-AT-AA-CG-C-TA----------AA-CTAGA-C
gi|20148 : ctaaactagacacatttcatagacCTGTG-TT-GA-GA-C-TA----------AA-CTAGA-CA-CATTT-C-AT---GAC-A-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20181 : CTATG-AT-GA-CG-C-TA----------AA-CTAGA-C
gi|20180 : ctaaactagacacatttcattggcCTATG-AT-GA-CG-C-TA----------AA-CTAGA-C
gi|20122 : ctaaactagacacatttcattggcCTGTG-AT-GA-CG-C-TA----------AA-CATTA-CA-CATTT-C-AA--AGGC-C-----TGT-GA-CG-ACA-CT-ATACTAGAC
gi|20151 : CTGTG-AT-GA-CA-C-TA----------AAACCATA-CAACATTT-C-AT--AGGC-A-----TGT-GA-TG-ACG-CT-AAATTGGAC
gi|20141 : CTGTG-AT-GA-CG-T-TA----------AA-CTAAA-CA-CATTT-C-AT--AAGT-C-----AGT-GA-TG-ACG-CT-
gi|20134 : CTGTG-AT-GA-CG-C-TA----------AA-CTAGA-CT-AATTT-C-ATA-AGGC-A-----T-T-GA-TG-ACA-CT-ATACTAGAC
gi|20152 : CCGTG-AT-GA-CG-CCTA----------AA-CTAGA--A-CATTC-C-AT--AGGG-C-----TGT-GA-TG-ACG-GTAAAACTAGAC
gi|20145 : CTGTG-AG-AA-CA-C-TA----------AA-CTAGA-CA-CATTT-C-AT--A-GC-C-----TGTGGA-TG--CA-CT-AAACTAGAC
gi|20150 : CTGTG-AT-AA-CG-C-TA----------AG-CTAGA-CA-CA-TT-C-AT--AGGC-C-----TGT-GA-GG-AAC-AT-AAACTAGA
gi|20183 : CTGTG-AT-GA-CC-C-TA----------AA-CTAGA-C
gi|20149 : ctaaactagaacacatttcattggcCTGTG-AA-GAACA-C-TA----------AA-CTAGA-CA-CATTT-C-AT--AAGC-C-----TTT-GA-TG-ACG-C
gi|20153 : CTGTG-AT-GA-CC-C-TA----------AA-CTAGA-CA-CAATG-C-AT--AGGG-C-----TGT-GA-TG-A
gi|20154 : TGTG-AT-GA-CG-C-TA----------AA-CTAGA-CA-CATTT-C-AT--AGGC-C-----CGT-GA-TT-ACG-CT-AAACTAGAC
gi|20158 : TGTG-AT-GA-CG-C-TA----------AA-CTAGA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20155 : TGTA-AT-GA-AG-C-TA----------AA-CTAGA-CA-CATTC-C-AT--AGGG-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20163 : TGTG-AT-GA-AG-C-TA----------AA-CTAGA-CA-CACGT-C-AT--AGGC-C-----TGT-GA-TG-ACG-TT-AAACTAAAC
gi|20159 : TGTG-AT-GA-CG-C-CA----------AA-CTAGA-CA-CATTTCC-AT--AGGT-C-----TGT-GA-GA-ACA-CT-AAACTAGAC
gi|20160 : TGTG-AT-GA-CG-C-TA----------A--CTAGA-CA-CATTT-C-AT--AGGT-C-----TGT-GA-AGAACA-CT-AAACTAGAC
gi|20161 : TGTG-AT-GA-CGTC-TA----------AA-CTAGA-AA-CATTT-C-AT--AGGC-C-----TGT-GT-TG-AGA-CT-AAACTAGAC
gi|20156 : TGTG-AT-GA-CG-C-TA----------AA-TTGGA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-CG-ACA-CT-GAACTAG
gi|20165 : TGTG-ATTGA-CG-C-TA----------AAACTAGA-CA-CATTT-C-AT--AGGG-C-----AGG-GA-TG-ACG-CT-AAACTAGAC
gi|20166 : TGTG-AT-GA-AG-C-TA----------AA-CTAGA-CA-CATTT---AT--AGGT-CG----TGT-GA-TG-AAG-CT-AAACTAGAC
gi|20162 : TGTG-AT-GA-CA-C-TA----------AA-CTAGA-CA-CATTC-C-AT--A-AC-A-----TGT-GA-TG-ACG-CT--AACTAGAC
gi|20164 : TGTGCAT-GA-CG-C-TA----------AA-CTAGA-CA--ATTT-TGAT--AGG--C-----TGT-GA-TG-ACA-CT-AAGCTAGAC
gi|20168 : TGTG-AT-GA-CG-C-TA----------AG-CTAGA-CA-CATTC-C-AA--AGGCAA-----TGT-GATTG-ACG-CTAAAACTAGAC
gi|20167 : TGTG-AT-GA-CG-C-TA----------AA-TTGGA-CA-CATTT-C-AT--AGG--A-----TGT-GA-CG-ACA--T-AAACTAG
gi|20157 : TGTG-AT-GA-CA-C-TATACTAGACTAAA-CTAAA-CA-CATTC-C-AT--AGGG-CTGTGATGT-GA-TG-ACG-CT-AAACTAGAC
gi|20169 : GTG-AT-GA-CG-C-TA----------AG-CTAGA-CA-CATTC-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-GAACTAGAC
gi|20170 : GTG-AT-GA-CG-C-TA----------AG-CTAGA-CA-CATTT-CGAT--A-GC-C-----TGT-GA-TG-ACG-CT-GAACTAGAC
gi|20171 : GTA-AT-GA--G-C-TA----------AA-CTAGA-CC-CATTC-C-AT--AGGC-------TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20172 : GTG-AT-GC-C--C-TA----------AA-CTAGC-CA-CAATG-C-AT--AGGG-C-----TGT-GA-TG-ACC-CT-AAACTAGAC
gi|20173 : TG-AT-GA-CG-C-TA----------AG-CTAGA-CA-CATTT-C-AT--AGGC-T-----TGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20182 : TG-AT-TA-CG-C-TA----------AA-CTAGA-C
gi|20174 : ctaaactagacacatttcataggcccaTG-AT-TA-CG-C-TA----------AA-CTAGA-CA-CATTT-TAAT--AGGC-C-----TGT-GA-TG-ACA-CT-
gi|20175 : G-AT-GA-CA-C-TA----------AA-CTAGA-CA-CATTT-C-AT--AGGC-A-----TGT-AA-TG-AAG-CT-AAACTAGAC
gi|20176 : G-AT-GA-CG-C-TA----------AA-CTAGA-CA-CATTT-C-AT--TGGC-C-----TGT-GATTG-ACG-CT-
gi|20177 : G-AT-GA--G-C-TA----------A--CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GC-TGAACG-CT-AAACTATAC
gi|20178 : -C-TA----------AA-CTAGA-CG-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20179 : -C-TA----------AA-CTAGA-CA-CATTT-C-AT--AGAC-C-----TGT-GA-TA-ACG-CT-AAACTAGAC
gi|20181 : -C-TA----------AA-CTAGA-CA-CATTT-C-AT--TGGC-C-----TAT-GA-TG-ACG-CT-AAACTAGAC
gi|20180 : -C-TA----------AA-CTAGA-CA-CATTT-C-AT--TGGC-C-----TAT-GA-TG-ACG-CT-AAACTAGAC
gi|20182 : -C-TA----------AA-CTAGA-CA-CATTT-C-AT--AGGC-C-----CAT-GA-TT-ACG-CT-AAACTAGAC
gi|20183 : -C-TA----------AA-CTAGAACA-CATTT-C-AT--TGGC-C-----TGT-GA-TG-ACC-CT-AAACTAGAC
gi|20184 : A----------AA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GC-TG-ACG-CT-
gi|20141 : -C-----TGT-GA-TG-ACG-TT-AAACTAAAC
gi|20153 : -C-----TGT-GA-TG-ACC-CT-AAACTAGACacatttcataagtcagtgatgacgcta
gi|20174 : T-GA-TT-ACG-CT-AAACTAGACacaatgcatagggctgtgatga
gi|20176 : -GA-TG-ACG-CT-AAACTAGACacattttaataggcctgtgatgacacta
Alignments
lowQualScore : 0 1 1 2222222222 0 0 1 0 0 0 1 11 0 11111 0 1 1 1 1
lowQualScore : . . . .......... . . . . . . . .. . ..... . . . . .
lowQualScore : 6 2 2 6666666666 5 5 6 5 5 5 6 33 5 99999 5 1 1 1 1
consensus : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
Reference ( family-288 ) : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20111 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AAGC-A-----TGT-GA-TG-ACA-CT-ATACTAGAC
gi|20112 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20113 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20114 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20115 : CTGTG-AT-GA-C----------G-C-TGAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20116 : CTGTG-AT-AA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AAGC-C-----TGT-GA-CG-ACA-CT-AAACTAG
gi|20117 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20118 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-GG-ACA-CT-AAACTAGA
gi|20119 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----CGT-GA-TG-ACG-CT-AAACTAGA
gi|20120 : CTGTG-AT-GA-C----------G-G-GAAA-CTAGA-CA-CCTTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20121 : CTGTG-CT-GA-C----------G-C-TAAA-CTGGA-CA-CATTT-C-AT--AGGC-C-----TAT-GA-CG-ACA-CT-AAACTAG
gi|20122 : CTGTG-AT-GA-C----------G-C-TAAA-CATTA-CA-CATTT-C-AA--AGGC-C-----TGT-GA-CG-ACA-CT-ATACTAGAC
gi|20123 : CCGTG-AT-TA-C----------G-C-TAAA-CTAGA-CA-CATTT-T-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACCATAC
gi|20124 : CCGTG-AT-GA-C----------G-C-TAAA-CTAGA-AA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAAC
gi|20125 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTC-C-AT--AGGG-C-----TGT-GA-TG-ACG-GG-AAACTAGAC
gi|20126 : CTGTC-AT-GA-A----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGG-C-----TGT-GC-TG-ACG-CT-AAACTGGAC
gi|20127 : CTGTC-AT-GA-A----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGG-C-----TGT-GC-TG-ACG-CT-AAACTGGAC
gi|20128 : CTATG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--ATGA-C-----TGT-CA-TG-AAG-CT-AAACTAGAC
gi|20129 : CTATG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--ATGA-C-----TGT-CA-TG-AAG-CT-AAACTAGAC
gi|20130 : CTGTG-CT-GA-C----------G-C-TAAA-CTGGA-CA-CATTT-C-AT--AGGG-C-----AGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20131 : CTGTG-AT-GA-C----------A-C-TAAA-CCATA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-TG-ACG-CT-AAATTGGAC
gi|20132 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-CAAT--AGG--C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20133 : CTGTG-AT-GA-C----------G-C-TGAA-CTAGA-CA-CATTT-C-AT--AGG--C-----TGT-GA-TG-ACA-CT-AAACTAGA
gi|20134 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CT-AATTT-C-ATA-AGGC-A-----T-T-GA-TG-ACA-CT-ATACTAGAC
gi|20135 : CTGTG-AT-GA-C----------A-C-TAAG-CTAGA-CA-CATTT-C-ATAAAGGC-C-----TGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20136 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGG-C-----AGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20137 : CTGTG-AT-GA-C----------G-G-TAAAACTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACT-GAC
gi|20138 : CTGTG-ATTGA-C----------G-C-TAAG-CT-GA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20139 : CTGTG-AT-GA-C----------G-C-TAAG-CTAGA-CA-TATTT-C-TT--AGGT-T-----TGT-GA-TG-AAG-CT-AAACTAGAC
gi|20140 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-AA-CATTT-C-AT--AGGC-C-----CGT-GA-TG-ACGCCT-AAACTAGA
gi|20141 : CTGTG-AT-GA-C----------G-T-TAAA-CTAAA-CA-CATTT-C-AT--AAGT-C-----AGT-GA-TG-ACG-CT-
gi|20142 : CTGTG-AT-GA-C----------C-C-TAAA-CTAGA-CA-CATTT-C-AT--ATGA-C-----TGT-CA-TG-AAG-CT-AAACTAGAC
gi|20143 : CTGTC-AT-GA-A----------G-C-TAAA-CTAGA-CA-ATTTT-C-AT--AGGG-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20144 : CTGTG-CT-GAAC----------G-C-TAAA-CTATA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-TG-ACG-CC-AAACTAGAC
gi|20145 : CTGTG-AG-AA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--A-GC-C-----TGTGGA-TG--CA-CT-AAACTAGAC
gi|20146 : CTGTG-AT-GA-C----------A-C-TAAA-CT-GA-CA-TATTT-T-AT--AGGC-------TGT-GA-TA-ACG-CT-AAGCTAGAC
gi|20147 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CA-TT-C-AT--AGAC-A-----TGT-GA-TG-ACGTCT-AAACTAGA
gi|20148 : CTGTG-TT-GA-G----------A-C-TAAA-CTAGA-CA-CATTT-C-AT---GAC-A-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20149 : CTGTG-AA-GAAC----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AAGC-C-----TTT-GA-TG-ACG-C
gi|20150 : CTGTG-AT-AA-C----------G-C-TAAG-CTAGA-CA-CA-TT-C-AT--AGGC-C-----TGT-GA-GG-AAC-AT-AAACTAGA
gi|20151 : CTGTG-AT-GA-C----------A-C-TAAAACCATA-CAACATTT-C-AT--AGGC-A-----TGT-GA-TG-ACG-CT-AAATTGGAC
gi|20152 : CCGTG-AT-GA-C----------G-CCTAAA-CTAGA--A-CATTC-C-AT--AGGG-C-----TGT-GA-TG-ACG-GTAAAACTAGAC
gi|20153 : CTGTG-AT-GA-C----------C-C-TAAA-CTAGA-CA-CAATG-C-AT--AGGG-C-----TGT-GA-TG-A
gi|20154 : TGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----CGT-GA-TT-ACG-CT-AAACTAGAC
gi|20155 : TGTA-AT-GA-A----------G-C-TAAA-CTAGA-CA-CATTC-C-AT--AGGG-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20156 : TGTG-AT-GA-C----------G-C-TAAA-TTGGA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-CG-ACA-CT-GAACTAG
gi|20157 : TGTG-AT-GA-CACTATACTAGA-C-TAAA-CTAAA-CA-CATTC-C-AT--AGGG-CTGTGATGT-GA-TG-ACG-CT-AAACTAGAC
gi|20158 : TGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20159 : TGTG-AT-GA-C----------G-C-CAAA-CTAGA-CA-CATTTCC-AT--AGGT-C-----TGT-GA-GA-ACA-CT-AAACTAGAC
gi|20160 : TGTG-AT-GA-C----------G-C-TAA--CTAGA-CA-CATTT-C-AT--AGGT-C-----TGT-GA-AGAACA-CT-AAACTAGAC
gi|20161 : TGTG-AT-GA-C----------GTC-TAAA-CTAGA-AA-CATTT-C-AT--AGGC-C-----TGT-GT-TG-AGA-CT-AAACTAGAC
gi|20162 : TGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTC-C-AT--A-AC-A-----TGT-GA-TG-ACG-CT--AACTAGAC
gi|20163 : TGTG-AT-GA-A----------G-C-TAAA-CTAGA-CA-CACGT-C-AT--AGGC-C-----TGT-GA-TG-ACG-TT-AAACTAAAC
gi|20164 : TGTGCAT-GA-C----------G-C-TAAA-CTAGA-CA-ATTTT-G-AT--AGG--C-----TGT-GA-TG-ACA-CT-AAGCTAGAC
gi|20165 : TGTG-ATTGA-C----------G-C-TAAAACTAGA-CA-CATTT-C-AT--AGGG-C-----AGG-GA-TG-ACG-CT-AAACTAGAC
gi|20166 : TGTG-AT-GA-A----------G-C-TAAA-CTAGA-CA-CATTT---AT--AGGT-CG----TGT-GA-TG-AAG-CT-AAACTAGAC
gi|20167 : TGTG-AT-GA-C----------G-C-TAAA-TTGGA-CA-CATTT-C-AT--AGG--A-----TGT-GA-CG-ACA--T-AAACTAG
gi|20168 : TGTG-AT-GA-C----------G-C-TAAG-CTAGA-CA-CATTC-C-AA--AGGCAA-----TGT-GATTG-ACG-CTAAAACTAGAC
gi|20169 : GTG-AT-GA-C----------G-C-TAAG-CTAGA-CA-CATTC-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-GAACTAGAC
gi|20170 : GTG-AT-GA-C----------G-C-TAAG-CTAGA-CA-CATTT-CGAT--A-GC-C-----TGT-GA-TG-ACG-CT-GAACTAGAC
gi|20171 : GTA-AT-GA------------G-C-TAAA-CTAGA-CC-CATTC-C-AT--AGGC-------TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20172 : GTG-AT-GC-C------------C-TAAA-CTAGC-CA-CAATG-C-AT--AGGG-C-----TGT-GA-TG-ACC-CT-AAACTAGAC
gi|20173 : TG-AT-GA-C----------G-C-TAAG-CTAGA-CA-CATTT-C-AT--AGGC-T-----TGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20174 : TG-AT-TA-C----------G-C-TAAA-CTAGA-CA-CATTT-TAAT--AGGC-C-----TGT-GA-TG-ACA-CT-
gi|20175 : G-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-A-----TGT-AA-TG-AAG-CT-AAACTAGAC
gi|20176 : G-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--TGGC-C-----TGT-GATTG-ACG-CT-
gi|20177 : G-AT-GA------------G-C-TAA--CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GC-TGAACG-CT-AAACTATAC
gi|20178 : -C-TAAA-CTAGA-CG-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20179 : -C-TAAA-CTAGA-CA-CATTT-C-AT--AGAC-C-----TGT-GA-TA-ACG-CT-AAACTAGAC
gi|20180 : -C-TAAA-CTAGA-CA-CATTT-C-AT--TGGC-C-----TAT-GA-TG-ACG-CT-AAACTAGAC
gi|20181 : -C-TAAA-CTAGA-CA-CATTT-C-AT--TGGC-C-----TAT-GA-TG-ACG-CT-AAACTAGAC
gi|20182 : -C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----CAT-GA-TT-ACG-CT-AAACTAGAC
gi|20183 : -C-TAAA-CTAGAACA-CATTT-C-AT--TGGC-C-----TGT-GA-TG-ACC-CT-AAACTAGAC
gi|20184 : AAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GC-TG-ACG-CT-
Alignments
lowQualScore : 0 1 1 2222222222 0 0 1 0 0 0 1 11 0 11111 0 1 1 1 1
lowQualScore : . . . .......... . . . . . . . .. . ..... . . . . .
lowQualScore : 6 2 2 6666666666 5 5 6 5 5 5 6 33 5 99999 5 1 1 1 1
consensus : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
Reference ( family-288 ) : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20111 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AAGC-A-----TGT-GA-TG-ACA-CT-ATACTAGAC
gi|20112 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20113 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20114 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20115 : CTGTG-AT-GA-C----------G-C-TGAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20116 : CTGTG-AT-AA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AAGC-C-----TGT-GA-CG-ACA-CT-AAACTAG
gi|20117 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20118 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-GG-ACA-CT-AAACTAGA
gi|20119 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----CGT-GA-TG-ACG-CT-AAACTAGA
gi|20120 : CTGTG-AT-GA-C----------G-G-GAAA-CTAGA-CA-CCTTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20121 : CTGTG-CT-GA-C----------G-C-TAAA-CTGGA-CA-CATTT-C-AT--AGGC-C-----TAT-GA-CG-ACA-CT-AAACTAG
gi|20122 : CTGTG-AT-GA-C----------G-C-TAAA-CATTA-CA-CATTT-C-AA--AGGC-C-----TGT-GA-CG-ACA-CT-ATACTAGAC
gi|20123 : CCGTG-AT-TA-C----------G-C-TAAA-CTAGA-CA-CATTT-T-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACCATAC
gi|20124 : CCGTG-AT-GA-C----------G-C-TAAA-CTAGA-AA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAAC
gi|20125 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTC-C-AT--AGGG-C-----TGT-GA-TG-ACG-GG-AAACTAGAC
gi|20126 : CTGTC-AT-GA-A----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGG-C-----TGT-GC-TG-ACG-CT-AAACTGGAC
gi|20127 : CTGTC-AT-GA-A----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGG-C-----TGT-GC-TG-ACG-CT-AAACTGGAC
gi|20128 : CTATG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--ATGA-C-----TGT-CA-TG-AAG-CT-AAACTAGAC
gi|20129 : CTATG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--ATGA-C-----TGT-CA-TG-AAG-CT-AAACTAGAC
gi|20130 : CTGTG-CT-GA-C----------G-C-TAAA-CTGGA-CA-CATTT-C-AT--AGGG-C-----AGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20131 : CTGTG-AT-GA-C----------A-C-TAAA-CCATA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-TG-ACG-CT-AAATTGGAC
gi|20132 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-CAAT--AGG--C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20133 : CTGTG-AT-GA-C----------G-C-TGAA-CTAGA-CA-CATTT-C-AT--AGG--C-----TGT-GA-TG-ACA-CT-AAACTAGA
gi|20134 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CT-AATTT-C-ATA-AGGC-A-----T-T-GA-TG-ACA-CT-ATACTAGAC
gi|20135 : CTGTG-AT-GA-C----------A-C-TAAG-CTAGA-CA-CATTT-C-ATAAAGGC-C-----TGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20136 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGG-C-----AGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20137 : CTGTG-AT-GA-C----------G-G-TAAAACTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACT-GAC
gi|20138 : CTGTG-ATTGA-C----------G-C-TAAG-CT-GA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20139 : CTGTG-AT-GA-C----------G-C-TAAG-CTAGA-CA-TATTT-C-TT--AGGT-T-----TGT-GA-TG-AAG-CT-AAACTAGAC
gi|20140 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-AA-CATTT-C-AT--AGGC-C-----CGT-GA-TG-ACGCCT-AAACTAGA
gi|20141 : CTGTG-AT-GA-C----------G-T-TAAA-CTAAA-CA-CATTT-C-AT--AAGT-C-----AGT-GA-TG-ACG-CT-
gi|20142 : CTGTG-AT-GA-C----------C-C-TAAA-CTAGA-CA-CATTT-C-AT--ATGA-C-----TGT-CA-TG-AAG-CT-AAACTAGAC
gi|20143 : CTGTC-AT-GA-A----------G-C-TAAA-CTAGA-CA-ATTTT-C-AT--AGGG-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20144 : CTGTG-CT-GAAC----------G-C-TAAA-CTATA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-TG-ACG-CC-AAACTAGAC
gi|20145 : CTGTG-AG-AA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--A-GC-C-----TGTGGA-TG--CA-CT-AAACTAGAC
gi|20146 : CTGTG-AT-GA-C----------A-C-TAAA-CT-GA-CA-TATTT-T-AT--AGGC-------TGT-GA-TA-ACG-CT-AAGCTAGAC
gi|20147 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CA-TT-C-AT--AGAC-A-----TGT-GA-TG-ACGTCT-AAACTAGA
gi|20148 : CTGTG-TT-GA-G----------A-C-TAAA-CTAGA-CA-CATTT-C-AT---GAC-A-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20149 : CTGTG-AA-GAAC----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AAGC-C-----TTT-GA-TG-ACG-C
gi|20150 : CTGTG-AT-AA-C----------G-C-TAAG-CTAGA-CA-CA-TT-C-AT--AGGC-C-----TGT-GA-GG-AAC-AT-AAACTAGA
gi|20151 : CTGTG-AT-GA-C----------A-C-TAAAACCATA-CAACATTT-C-AT--AGGC-A-----TGT-GA-TG-ACG-CT-AAATTGGAC
gi|20152 : CCGTG-AT-GA-C----------G-CCTAAA-CTAGA--A-CATTC-C-AT--AGGG-C-----TGT-GA-TG-ACG-GTAAAACTAGAC
gi|20153 : CTGTG-AT-GA-C----------C-C-TAAA-CTAGA-CA-CAATG-C-AT--AGGG-C-----TGT-GA-TG-A
gi|20154 : TGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----CGT-GA-TT-ACG-CT-AAACTAGAC
gi|20155 : TGTA-AT-GA-A----------G-C-TAAA-CTAGA-CA-CATTC-C-AT--AGGG-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20156 : TGTG-AT-GA-C----------G-C-TAAA-TTGGA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-CG-ACA-CT-GAACTAG
gi|20157 : TGTG-AT-GA-CACTATACTAGA-C-TAAA-CTAAA-CA-CATTC-C-AT--AGGG-CTGTGATGT-GA-TG-ACG-CT-AAACTAGAC
gi|20158 : TGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20159 : TGTG-AT-GA-C----------G-C-CAAA-CTAGA-CA-CATTTCC-AT--AGGT-C-----TGT-GA-GA-ACA-CT-AAACTAGAC
gi|20160 : TGTG-AT-GA-C----------G-C-TAA--CTAGA-CA-CATTT-C-AT--AGGT-C-----TGT-GA-AGAACA-CT-AAACTAGAC
gi|20161 : TGTG-AT-GA-C----------GTC-TAAA-CTAGA-AA-CATTT-C-AT--AGGC-C-----TGT-GT-TG-AGA-CT-AAACTAGAC
gi|20162 : TGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTC-C-AT--A-AC-A-----TGT-GA-TG-ACG-CT--AACTAGAC
gi|20163 : TGTG-AT-GA-A----------G-C-TAAA-CTAGA-CA-CACGT-C-AT--AGGC-C-----TGT-GA-TG-ACG-TT-AAACTAAAC
gi|20164 : TGTGCAT-GA-C----------G-C-TAAA-CTAGA-CA-ATTTT-G-AT--AGG--C-----TGT-GA-TG-ACA-CT-AAGCTAGAC
gi|20165 : TGTG-ATTGA-C----------G-C-TAAAACTAGA-CA-CATTT-C-AT--AGGG-C-----AGG-GA-TG-ACG-CT-AAACTAGAC
gi|20166 : TGTG-AT-GA-A----------G-C-TAAA-CTAGA-CA-CATTT---AT--AGGT-CG----TGT-GA-TG-AAG-CT-AAACTAGAC
gi|20167 : TGTG-AT-GA-C----------G-C-TAAA-TTGGA-CA-CATTT-C-AT--AGG--A-----TGT-GA-CG-ACA--T-AAACTAG
gi|20168 : TGTG-AT-GA-C----------G-C-TAAG-CTAGA-CA-CATTC-C-AA--AGGCAA-----TGT-GATTG-ACG-CTAAAACTAGAC
gi|20169 : GTG-AT-GA-C----------G-C-TAAG-CTAGA-CA-CATTC-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-GAACTAGAC
gi|20170 : GTG-AT-GA-C----------G-C-TAAG-CTAGA-CA-CATTT-CGAT--A-GC-C-----TGT-GA-TG-ACG-CT-GAACTAGAC
gi|20171 : GTA-AT-GA------------G-C-TAAA-CTAGA-CC-CATTC-C-AT--AGGC-------TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20172 : GTG-AT-GC-C------------C-TAAA-CTAGC-CA-CAATG-C-AT--AGGG-C-----TGT-GA-TG-ACC-CT-AAACTAGAC
gi|20173 : TG-AT-GA-C----------G-C-TAAG-CTAGA-CA-CATTT-C-AT--AGGC-T-----TGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20174 : TG-AT-TA-C----------G-C-TAAA-CTAGA-CA-CATTT-TAAT--AGGC-C-----TGT-GA-TG-ACA-CT-
gi|20175 : G-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-A-----TGT-AA-TG-AAG-CT-AAACTAGAC
gi|20176 : G-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--TGGC-C-----TGT-GATTG-ACG-CT-
gi|20177 : G-AT-GA------------G-C-TAA--CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GC-TGAACG-CT-AAACTATAC
gi|20178 : -C-TAAA-CTAGA-CG-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20179 : -C-TAAA-CTAGA-CA-CATTT-C-AT--AGAC-C-----TGT-GA-TA-ACG-CT-AAACTAGAC
gi|20180 : -C-TAAA-CTAGA-CA-CATTT-C-AT--TGGC-C-----TAT-GA-TG-ACG-CT-AAACTAGAC
gi|20181 : -C-TAAA-CTAGA-CA-CATTT-C-AT--TGGC-C-----TAT-GA-TG-ACG-CT-AAACTAGAC
gi|20182 : -C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----CAT-GA-TT-ACG-CT-AAACTAGAC
gi|20183 : -C-TAAA-CTAGAACA-CATTT-C-AT--TGGC-C-----TGT-GA-TG-ACC-CT-AAACTAGAC
gi|20184 : AAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GC-TG-ACG-CT-
blockSeqs : T A ACTATACTAG A A AA TGTGA T A C A
blockSeqs : T A . A G A G T A T A
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blockSeqCons :
originalCons : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
finalCons : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
Alignments
lowQualScore : 0 1 1 2222222222 0 0 1 0 0 0 1 11 0 11111 0 1 1 1 1
lowQualScore : . . . .......... . . . . . . . .. . ..... . . . . .
lowQualScore : 6 2 2 6666666666 5 5 6 5 5 5 6 33 5 99999 5 1 1 1 1
consensus : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
Reference ( family-288 ) : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20111 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AAGC-A-----TGT-GA-TG-ACA-CT-ATACTAGAC
gi|20112 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20113 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20114 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20115 : CTGTG-AT-GA-C----------G-C-TGAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20116 : CTGTG-AT-AA-C----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AAGC-C-----TGT-GA-CG-ACA-CT-AAACTAG
gi|20117 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20118 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-GG-ACA-CT-AAACTAGA
gi|20119 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----CGT-GA-TG-ACG-CT-AAACTAGA
gi|20120 : CTGTG-AT-GA-C----------G-G-GAAA-CTAGA-CA-CCTTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20121 : CTGTG-CT-GA-C----------G-C-TAAA-CTGGA-CA-CATTT-C-AT--AGGC-C-----TAT-GA-CG-ACA-CT-AAACTAG
gi|20122 : CTGTG-AT-GA-C----------G-C-TAAA-CATTA-CA-CATTT-C-AA--AGGC-C-----TGT-GA-CG-ACA-CT-ATACTAGAC
gi|20123 : CCGTG-AT-TA-C----------G-C-TAAA-CTAGA-CA-CATTT-T-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACCATAC
gi|20124 : CCGTG-AT-GA-C----------G-C-TAAA-CTAGA-AA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAAC
gi|20125 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTC-C-AT--AGGG-C-----TGT-GA-TG-ACG-GG-AAACTAGAC
gi|20126 : CTGTC-AT-GA-A----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGG-C-----TGT-GC-TG-ACG-CT-AAACTGGAC
gi|20127 : CTGTC-AT-GA-A----------G-C-TAAA-CTAGA-CA-TATTT-C-AT--AGGG-C-----TGT-GC-TG-ACG-CT-AAACTGGAC
gi|20128 : CTATG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--ATGA-C-----TGT-CA-TG-AAG-CT-AAACTAGAC
gi|20129 : CTATG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--ATGA-C-----TGT-CA-TG-AAG-CT-AAACTAGAC
gi|20130 : CTGTG-CT-GA-C----------G-C-TAAA-CTGGA-CA-CATTT-C-AT--AGGG-C-----AGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20131 : CTGTG-AT-GA-C----------A-C-TAAA-CCATA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-TG-ACG-CT-AAATTGGAC
gi|20132 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-TATTT-CAAT--AGG--C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20133 : CTGTG-AT-GA-C----------G-C-TGAA-CTAGA-CA-CATTT-C-AT--AGG--C-----TGT-GA-TG-ACA-CT-AAACTAGA
gi|20134 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CT-AATTT-C-ATA-AGGC-A-----T-T-GA-TG-ACA-CT-ATACTAGAC
gi|20135 : CTGTG-AT-GA-C----------A-C-TAAG-CTAGA-CA-CATTT-C-ATAAAGGC-C-----TGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20136 : CTGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGG-C-----AGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20137 : CTGTG-AT-GA-C----------G-G-TAAAACTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACT-GAC
gi|20138 : CTGTG-ATTGA-C----------G-C-TAAG-CT-GA-CA-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20139 : CTGTG-AT-GA-C----------G-C-TAAG-CTAGA-CA-TATTT-C-TT--AGGT-T-----TGT-GA-TG-AAG-CT-AAACTAGAC
gi|20140 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-AA-CATTT-C-AT--AGGC-C-----CGT-GA-TG-ACGCCT-AAACTAGA
gi|20141 : CTGTG-AT-GA-C----------G-T-TAAA-CTAAA-CA-CATTT-C-AT--AAGT-C-----AGT-GA-TG-ACG-CT-
gi|20142 : CTGTG-AT-GA-C----------C-C-TAAA-CTAGA-CA-CATTT-C-AT--ATGA-C-----TGT-CA-TG-AAG-CT-AAACTAGAC
gi|20143 : CTGTC-AT-GA-A----------G-C-TAAA-CTAGA-CA-ATTTT-C-AT--AGGG-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20144 : CTGTG-CT-GAAC----------G-C-TAAA-CTATA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-TG-ACG-CC-AAACTAGAC
gi|20145 : CTGTG-AG-AA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--A-GC-C-----TGTGGA-TG--CA-CT-AAACTAGAC
gi|20146 : CTGTG-AT-GA-C----------A-C-TAAA-CT-GA-CA-TATTT-T-AT--AGGC-------TGT-GA-TA-ACG-CT-AAGCTAGAC
gi|20147 : CTGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CA-TT-C-AT--AGAC-A-----TGT-GA-TG-ACGTCT-AAACTAGA
gi|20148 : CTGTG-TT-GA-G----------A-C-TAAA-CTAGA-CA-CATTT-C-AT---GAC-A-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20149 : CTGTG-AA-GAAC----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AAGC-C-----TTT-GA-TG-ACG-C
gi|20150 : CTGTG-AT-AA-C----------G-C-TAAG-CTAGA-CA-CA-TT-C-AT--AGGC-C-----TGT-GA-GG-AAC-AT-AAACTAGA
gi|20151 : CTGTG-AT-GA-C----------A-C-TAAAACCATA-CAACATTT-C-AT--AGGC-A-----TGT-GA-TG-ACG-CT-AAATTGGAC
gi|20152 : CCGTG-AT-GA-C----------G-CCTAAA-CTAGA--A-CATTC-C-AT--AGGG-C-----TGT-GA-TG-ACG-GTAAAACTAGAC
gi|20153 : CTGTG-AT-GA-C----------C-C-TAAA-CTAGA-CA-CAATG-C-AT--AGGG-C-----TGT-GA-TG-A
gi|20154 : TGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----CGT-GA-TT-ACG-CT-AAACTAGAC
gi|20155 : TGTA-AT-GA-A----------G-C-TAAA-CTAGA-CA-CATTC-C-AT--AGGG-C-----TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20156 : TGTG-AT-GA-C----------G-C-TAAA-TTGGA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-CG-ACA-CT-GAACTAG
gi|20157 : TGTG-AT-GA-CACTATACTAGA-C-TAAA-CTAAA-CA-CATTC-C-AT--AGGG-CTGTGATGT-GA-TG-ACG-CT-AAACTAGAC
gi|20158 : TGTG-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-A-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20159 : TGTG-AT-GA-C----------G-C-CAAA-CTAGA-CA-CATTTCC-AT--AGGT-C-----TGT-GA-GA-ACA-CT-AAACTAGAC
gi|20160 : TGTG-AT-GA-C----------G-C-TAA--CTAGA-CA-CATTT-C-AT--AGGT-C-----TGT-GA-AGAACA-CT-AAACTAGAC
gi|20161 : TGTG-AT-GA-C----------GTC-TAAA-CTAGA-AA-CATTT-C-AT--AGGC-C-----TGT-GT-TG-AGA-CT-AAACTAGAC
gi|20162 : TGTG-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTC-C-AT--A-AC-A-----TGT-GA-TG-ACG-CT--AACTAGAC
gi|20163 : TGTG-AT-GA-A----------G-C-TAAA-CTAGA-CA-CACGT-C-AT--AGGC-C-----TGT-GA-TG-ACG-TT-AAACTAAAC
gi|20164 : TGTGCAT-GA-C----------G-C-TAAA-CTAGA-CA-ATTTT-G-AT--AGG--C-----TGT-GA-TG-ACA-CT-AAGCTAGAC
gi|20165 : TGTG-ATTGA-C----------G-C-TAAAACTAGA-CA-CATTT-C-AT--AGGG-C-----AGG-GA-TG-ACG-CT-AAACTAGAC
gi|20166 : TGTG-AT-GA-A----------G-C-TAAA-CTAGA-CA-CATTT---AT--AGGT-CG----TGT-GA-TG-AAG-CT-AAACTAGAC
gi|20167 : TGTG-AT-GA-C----------G-C-TAAA-TTGGA-CA-CATTT-C-AT--AGG--A-----TGT-GA-CG-ACA--T-AAACTAG
gi|20168 : TGTG-AT-GA-C----------G-C-TAAG-CTAGA-CA-CATTC-C-AA--AGGCAA-----TGT-GATTG-ACG-CTAAAACTAGAC
gi|20169 : GTG-AT-GA-C----------G-C-TAAG-CTAGA-CA-CATTC-C-AT--AGGC-C-----TGT-GA-TG-ACG-CT-GAACTAGAC
gi|20170 : GTG-AT-GA-C----------G-C-TAAG-CTAGA-CA-CATTT-CGAT--A-GC-C-----TGT-GA-TG-ACG-CT-GAACTAGAC
gi|20171 : GTA-AT-GA------------G-C-TAAA-CTAGA-CC-CATTC-C-AT--AGGC-------TGT-GA-TG-ACG-CT-AAACTAGAC
gi|20172 : GTG-AT-GC-C------------C-TAAA-CTAGC-CA-CAATG-C-AT--AGGG-C-----TGT-GA-TG-ACC-CT-AAACTAGAC
gi|20173 : TG-AT-GA-C----------G-C-TAAG-CTAGA-CA-CATTT-C-AT--AGGC-T-----TGT-GA-TG-ACG-CT-AAGCTAGAC
gi|20174 : TG-AT-TA-C----------G-C-TAAA-CTAGA-CA-CATTT-TAAT--AGGC-C-----TGT-GA-TG-ACA-CT-
gi|20175 : G-AT-GA-C----------A-C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-A-----TGT-AA-TG-AAG-CT-AAACTAGAC
gi|20176 : G-AT-GA-C----------G-C-TAAA-CTAGA-CA-CATTT-C-AT--TGGC-C-----TGT-GATTG-ACG-CT-
gi|20177 : G-AT-GA------------G-C-TAA--CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GC-TGAACG-CT-AAACTATAC
gi|20178 : -C-TAAA-CTAGA-CG-CATTT-C-AT--AGGC-C-----TGT-GA-TG-ACA-CT-AAACTAGAC
gi|20179 : -C-TAAA-CTAGA-CA-CATTT-C-AT--AGAC-C-----TGT-GA-TA-ACG-CT-AAACTAGAC
gi|20180 : -C-TAAA-CTAGA-CA-CATTT-C-AT--TGGC-C-----TAT-GA-TG-ACG-CT-AAACTAGAC
gi|20181 : -C-TAAA-CTAGA-CA-CATTT-C-AT--TGGC-C-----TAT-GA-TG-ACG-CT-AAACTAGAC
gi|20182 : -C-TAAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----CAT-GA-TT-ACG-CT-AAACTAGAC
gi|20183 : -C-TAAA-CTAGAACA-CATTT-C-AT--TGGC-C-----TGT-GA-TG-ACC-CT-AAACTAGAC
gi|20184 : AAA-CTAGA-CA-CATTT-C-AT--AGGC-C-----TGT-GC-TG-ACG-CT-