lowQualScore : 0 2 0 0 0 0 0 00 11 1 11 0 0 0 2 0 1 0 0 0 0 0 1 333
lowQualScore : . . . . . . . .. .. . .. . . . . . . . . . . . . ...
lowQualScore : 5 2 5 5 5 5 5 77 33 1 33 5 5 5 2 5 1 5 5 5 5 5 1 999
consensus : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
Reference ( gi|11557 ) : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11561 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11560 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11559 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11558 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11565 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11564 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11563 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11562 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11566 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11567 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-T-TT-GGAT-GT-AAACG---TTAA
gi|11569 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TTGGGAT-GT-AAACG---TTAAA
gi|11568 : TAAACTG-TTTGT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11570 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11571 : TAAACTG-TT-GG-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11577 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AATT-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11576 : TAAACTG-TTTGT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11575 : TAAACTG-TTTGT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11574 : TAAACTG-TT-GT-GGA-T-CT-ACTTAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11573 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-TAAAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11572 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-AGC-TT-GGAT-GT-AAACG---TTAA
gi|11578 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGTAATTAAA
gi|11582 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11581 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11580 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11579 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11583 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C--T-GGAT-GT-AAACG---TTAA
gi|11584 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11585 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GAAT-GT-AAACG---TTAAA
gi|11586 : TAAACTG-TT-GT-GGA-T-CT-TCTGAAA-T--G--A-T--TTTAA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11587 : TAAACTG-TT-GG-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GAGG-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11591 : TAAAATG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11590 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G----T--TT-AA-T-T-AAAAAGGA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11589 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGATAGT-AAACG---TTAAA
gi|11588 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--ATT--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GTAAAACG---TTAA
gi|11592 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11595 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-A-TAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11594 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TA-TA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11593 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGT--TTAAA
gi|11600 : TAAAATG-TT-GT-GG--T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11599 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-GAA-C-TT-GGAT-GT-AAACG---TTAA
gi|11598 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-CATT-GGAT-GT-AAACG---TTAA
gi|11597 : TAAACTGGTT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11596 : TAAACTG-TT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-TAAAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11601 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--ATT--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11602 : TAAACTG-TT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG----TAAA
gi|11603 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA---T-AAAAA-GA-G-A-C--T-GGAT-GT-AAACG---TTAA
gi|11604 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-TTAG--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11605 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--GT-AA-TAA-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11607 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-A-TT-GGAT--T-AAATG---TTAAA
gi|11606 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAATT--G--A-T--TT-AA-T-T-AAAA---A-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11609 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-G--T--AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11608 : TAAACTG-TT-GT-GGAAT-CT-ACTGAAA-T--G--A----TT-AA-T-TAAAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11610 : TAAACTG-TT-GT--GA-T-CT-ACTGAAA-T--G--A-TG-TT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11611 : TAAACTG-GT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-GT--GAT-GT-AAACG---TTAA
gi|11612 : TAAACTG-TT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--GT-A--T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11613 : TAAACTG-TT-GT-GGA---CT-ACTGAAA-T--GATA-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11614 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-TTATT-AA-T-TAAAAAA-GA-G-A---TT-GGAT-GT-AAACG---TTAAA
gi|11615 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A---TT-GGAT-GT-TAACG---TTAAA
gi|11616 : TAAATTG-TTTGT-GGA-TTCT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-G--G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11617 : TAAACTG-T--GT-GGA-T-CT-ACTGAAA-T--G--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT--T-AAACG---TTAA
gi|11618 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--T-G--TT-AA---T-AAAAA-GAGG-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11619 : TAAACTG-TT--T-GGA-T-CT--CTGAAA-T--G--A-T--GT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11620 : TAAAAGG-TT-GTTGGA-T-CTGACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GA-AAACG---TTAA
gi|11621 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--GA-A-T--TT-AA-T-T-AAAAA-GA-G-A----T-GGA---T-AGACG---TTAA
gi|11622 : TAAACTG-TT-GT-GGA-T-CA-ACTGAAA-T--G--A-T--GT-AA-T-A-AAAAA-G--G-A-C--T-GGAT-GTAAAACG---TTAAA
gi|11623 : AAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11624 : AAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG----TAAA
gi|11625 : AAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA---T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG----TAAA
gi|11626 : AAACTG-TT-GT-G-A-T-CT-ACTGAA--T--G--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11627 : AACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGATATTAAA
gi|11628 : AACTG-TT-GG-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGA--TTAAA
gi|11629 : AACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--GT-AA---T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11630 : AACTG-T--GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT--AACG---TTAA
gi|11631 : AACTG-TT-GT-GGA-T-CT-A-TGAAA-T--G--A-T--TT-AA-T-T-AAAA--GA-G-A-C-TT-GGAT-GT-AAACGTAATTAAA
Alignments
lowQualScore : 0 2 0 0 0 0 0 00 11 1 11 0 0 0 2 0 1 0 0 0 0 0 1 333
lowQualScore : . . . . . . . .. .. . .. . . . . . . . . . . . . ...
lowQualScore : 5 1 5 5 5 5 5 77 33 1 33 5 5 5 1 5 1 5 5 5 5 5 1 999
consensus : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
Reference ( family-284 ) : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11557 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11558 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11559 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11560 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11561 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11562 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11563 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11564 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11565 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11566 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11567 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-T-TT-GGAT-GT-AAACG---TTAA
gi|11568 : TAAACTG-TTTGT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11569 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TTGGGAT-GT-AAACG---TTAAA
gi|11570 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11571 : TAAACTG-TT-GG-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11572 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-AGC-TT-GGAT-GT-AAACG---TTAA
gi|11573 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-TAAAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11574 : TAAACTG-TT-GT-GGA-T-CT-ACTTAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11575 : TAAACTG-TTTGT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11576 : TAAACTG-TTTGT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11577 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AATT-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11578 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGTAATTAAA
gi|11579 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11580 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11581 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11582 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11583 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C--T-GGAT-GT-AAACG---TTAA
gi|11584 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11585 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GAAT-GT-AAACG---TTAAA
gi|11586 : TAAACTG-TT-GT-GGA-T-CT-TCTGAAA-T--G--A-T--TTTAA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11587 : TAAACTG-TT-GG-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GAGG-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11588 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--ATT--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GTAAAACG---TTAA
gi|11589 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGATAGT-AAACG---TTAAA
gi|11590 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G----T--TT-AA-T-T-AAAAAGGA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11591 : TAAAATG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11592 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11593 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGT--TTAAA
gi|11594 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TA-TA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11595 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-A-TAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11596 : TAAACTG-TT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-TAAAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11597 : TAAACTGGTT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11598 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-CATT-GGAT-GT-AAACG---TTAA
gi|11599 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-GAA-C-TT-GGAT-GT-AAACG---TTAA
gi|11600 : TAAAATG-TT-GT-GG--T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11601 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--ATT--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11602 : TAAACTG-TT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG----TAAA
gi|11603 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA---T-AAAAA-GA-G-A-C--T-GGAT-GT-AAACG---TTAA
gi|11604 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-TTAG--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11605 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--GT-AA-TAA-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11606 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAATT--G--A-T--TT-AA-T-T-AAAA---A-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11607 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-A-TT-GGAT--T-AAATG---TTAAA
gi|11608 : TAAACTG-TT-GT-GGAAT-CT-ACTGAAA-T--G--A----TT-AA-T-TAAAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11609 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-G--T--AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11610 : TAAACTG-TT-GT--GA-T-CT-ACTGAAA-T--G--A-TG-TT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11611 : TAAACTG-GT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-GT--GAT-GT-AAACG---TTAA
gi|11612 : TAAACTG-TT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--GT-A--T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11613 : TAAACTG-TT-GT-GGA---CT-ACTGAAA-T--GATA-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11614 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-TTATT-AA-T-TAAAAAA-GA-G-A---TT-GGAT-GT-AAACG---TTAAA
gi|11615 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A---TT-GGAT-GT-TAACG---TTAAA
gi|11616 : TAAATTG-TTTGT-GGA-TTCT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-G--G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11617 : TAAACTG-T--GT-GGA-T-CT-ACTGAAA-T--G--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT--T-AAACG---TTAA
gi|11618 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--T-G--TT-AA---T-AAAAA-GAGG-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11619 : TAAACTG-TT--T-GGA-T-CT--CTGAAA-T--G--A-T--GT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11620 : TAAAAGG-TT-GTTGGA-T-CTGACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GA-AAACG---TTAA
gi|11621 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--GA-A-T--TT-AA-T-T-AAAAA-GA-G-A----T-GGA---T-AGACG---TTAA
gi|11622 : TAAACTG-TT-GT-GGA-T-CA-ACTGAAA-T--G--A-T--GT-AA-T-A-AAAAA-G--G-A-C--T-GGAT-GTAAAACG---TTAAA
gi|11623 : AAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11624 : AAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG----TAAA
gi|11625 : AAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA---T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG----TAAA
gi|11626 : AAACTG-TT-GT-G-A-T-CT-ACTGAA--T--G--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11627 : AACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGATATTAAA
gi|11628 : AACTG-TT-GG-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGA--TTAAA
gi|11629 : AACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--GT-AA---T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11630 : AACTG-T--GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT--AACG---TTAA
gi|11631 : AACTG-TT-GT-GGA-T-CT-A-TGAAA-T--G--A-T--TT-AA-T-T-AAAA--GA-G-A-C-TT-GGAT-GT-AAACGTAATTAAA
Alignments
lowQualScore : 0 2 0 0 0 0 0 00 11 1 11 0 0 0 2 0 1 0 0 0 0 0 1 333
lowQualScore : . . . . . . . .. .. . .. . . . . . . . . . . . . ...
lowQualScore : 5 1 5 5 5 5 5 77 33 1 33 5 5 5 1 5 1 5 5 5 5 5 1 999
consensus : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
Reference ( family-284 ) : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11557 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11558 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11559 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11560 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11561 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11562 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11563 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11564 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11565 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11566 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11567 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-T-TT-GGAT-GT-AAACG---TTAA
gi|11568 : TAAACTG-TTTGT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11569 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TTGGGAT-GT-AAACG---TTAAA
gi|11570 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11571 : TAAACTG-TT-GG-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11572 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-AGC-TT-GGAT-GT-AAACG---TTAA
gi|11573 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-TAAAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11574 : TAAACTG-TT-GT-GGA-T-CT-ACTTAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11575 : TAAACTG-TTTGT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11576 : TAAACTG-TTTGT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11577 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AATT-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11578 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGTAATTAAA
gi|11579 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11580 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11581 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11582 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11583 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C--T-GGAT-GT-AAACG---TTAA
gi|11584 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11585 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GAAT-GT-AAACG---TTAAA
gi|11586 : TAAACTG-TT-GT-GGA-T-CT-TCTGAAA-T--G--A-T--TTTAA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11587 : TAAACTG-TT-GG-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GAGG-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11588 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--ATT--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GTAAAACG---TTAA
gi|11589 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGATAGT-AAACG---TTAAA
gi|11590 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G----T--TT-AA-T-T-AAAAAGGA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11591 : TAAAATG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11592 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11593 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGT--TTAAA
gi|11594 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TA-TA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11595 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-A-TAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11596 : TAAACTG-TT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-TAAAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11597 : TAAACTGGTT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11598 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-CATT-GGAT-GT-AAACG---TTAA
gi|11599 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-GAA-C-TT-GGAT-GT-AAACG---TTAA
gi|11600 : TAAAATG-TT-GT-GG--T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11601 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--ATT--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11602 : TAAACTG-TT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG----TAAA
gi|11603 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA---T-AAAAA-GA-G-A-C--T-GGAT-GT-AAACG---TTAA
gi|11604 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-TTAG--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11605 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--GT-AA-TAA-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11606 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAATT--G--A-T--TT-AA-T-T-AAAA---A-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11607 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-A-TT-GGAT--T-AAATG---TTAAA
gi|11608 : TAAACTG-TT-GT-GGAAT-CT-ACTGAAA-T--G--A----TT-AA-T-TAAAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11609 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-G--T--AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11610 : TAAACTG-TT-GT--GA-T-CT-ACTGAAA-T--G--A-TG-TT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11611 : TAAACTG-GT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-GT--GAT-GT-AAACG---TTAA
gi|11612 : TAAACTG-TT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--GT-A--T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11613 : TAAACTG-TT-GT-GGA---CT-ACTGAAA-T--GATA-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11614 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-TTATT-AA-T-TAAAAAA-GA-G-A---TT-GGAT-GT-AAACG---TTAAA
gi|11615 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A---TT-GGAT-GT-TAACG---TTAAA
gi|11616 : TAAATTG-TTTGT-GGA-TTCT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-G--G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11617 : TAAACTG-T--GT-GGA-T-CT-ACTGAAA-T--G--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT--T-AAACG---TTAA
gi|11618 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--T-G--TT-AA---T-AAAAA-GAGG-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11619 : TAAACTG-TT--T-GGA-T-CT--CTGAAA-T--G--A-T--GT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11620 : TAAAAGG-TT-GTTGGA-T-CTGACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GA-AAACG---TTAA
gi|11621 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--GA-A-T--TT-AA-T-T-AAAAA-GA-G-A----T-GGA---T-AGACG---TTAA
gi|11622 : TAAACTG-TT-GT-GGA-T-CA-ACTGAAA-T--G--A-T--GT-AA-T-A-AAAAA-G--G-A-C--T-GGAT-GTAAAACG---TTAAA
gi|11623 : AAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11624 : AAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG----TAAA
gi|11625 : AAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA---T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG----TAAA
gi|11626 : AAACTG-TT-GT-G-A-T-CT-ACTGAA--T--G--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11627 : AACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGATATTAAA
gi|11628 : AACTG-TT-GG-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGA--TTAAA
gi|11629 : AACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--GT-AA---T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11630 : AACTG-T--GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT--AACG---TTAA
gi|11631 : AACTG-TT-GT-GGA-T-CT-A-TGAAA-T--G--A-T--TT-AA-T-T-AAAA--GA-G-A-C-TT-GGAT-GT-AAACGTAATTAAA
blockSeqs : T AT T TA A G A TAA
blockSeqs : T A T G A G A ATA
blockSeqs : T . . . A . . TAA
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blockSeqs : . . . . . . . .
blockSeqs : . . . . . . . .
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blockSeqs : . . . . . . . .
blockSeqs : . . . . . . . .
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blockSeqs : . . . . . . . .
blockSeqs : . . . . . . . .
blockSeqs : . . . . . . . .
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blockSeqs : . . . . . . . .
blockSeqCons :
originalCons : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
finalCons : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
Alignments
lowQualScore : 0 2 0 0 0 0 0 00 11 1 11 0 0 0 2 0 1 0 0 0 0 0 1 333
lowQualScore : . . . . . . . .. .. . .. . . . . . . . . . . . . ...
lowQualScore : 5 1 5 5 5 5 5 77 33 1 33 5 5 5 1 5 1 5 5 5 5 5 1 999
consensus : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
Reference ( family-284 ) : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11557 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11558 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11559 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11560 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11561 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11562 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11563 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11564 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11565 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11566 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11567 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-T-TT-GGAT-GT-AAACG---TTAA
gi|11568 : TAAACTG-TTTGT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11569 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TTGGGAT-GT-AAACG---TTAAA
gi|11570 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11571 : TAAACTG-TT-GG-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11572 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-AGC-TT-GGAT-GT-AAACG---TTAA
gi|11573 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-TAAAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11574 : TAAACTG-TT-GT-GGA-T-CT-ACTTAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11575 : TAAACTG-TTTGT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11576 : TAAACTG-TTTGT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11577 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AATT-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11578 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGTAATTAAA
gi|11579 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11580 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11581 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11582 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11583 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C--T-GGAT-GT-AAACG---TTAA
gi|11584 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11585 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GAAT-GT-AAACG---TTAAA
gi|11586 : TAAACTG-TT-GT-GGA-T-CT-TCTGAAA-T--G--A-T--TTTAA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11587 : TAAACTG-TT-GG-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GAGG-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11588 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--ATT--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GTAAAACG---TTAA
gi|11589 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGATAGT-AAACG---TTAAA
gi|11590 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G----T--TT-AA-T-T-AAAAAGGA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11591 : TAAAATG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11592 : TAAACTG-TT-GT-GGA-T-CT-ACTGAA--T--G--A-T--TT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11593 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGT--TTAAA
gi|11594 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TA-TA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11595 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-A-TAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11596 : TAAACTG-TT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-TAAAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11597 : TAAACTGGTT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11598 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A-CATT-GGAT-GT-AAACG---TTAA
gi|11599 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-GAA-C-TT-GGAT-GT-AAACG---TTAA
gi|11600 : TAAAATG-TT-GT-GG--T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11601 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--ATT--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11602 : TAAACTG-TT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG----TAAA
gi|11603 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA---T-AAAAA-GA-G-A-C--T-GGAT-GT-AAACG---TTAA
gi|11604 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-TTAG--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTA
gi|11605 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--GT-AA-TAA-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11606 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAATT--G--A-T--TT-AA-T-T-AAAA---A-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11607 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-A-TT-GGAT--T-AAATG---TTAAA
gi|11608 : TAAACTG-TT-GT-GGAAT-CT-ACTGAAA-T--G--A----TT-AA-T-TAAAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11609 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-G--T--AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11610 : TAAACTG-TT-GT--GA-T-CT-ACTGAAA-T--G--A-TG-TT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11611 : TAAACTG-GT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-GT--GAT-GT-AAACG---TTAA
gi|11612 : TAAACTG-TT-GT-G-A-T-CT-ACTGAAA-T--G--A-T--GT-A--T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11613 : TAAACTG-TT-GT-GGA---CT-ACTGAAA-T--GATA-T--TT-AA-T-T--AAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11614 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-TTATT-AA-T-TAAAAAA-GA-G-A---TT-GGAT-GT-AAACG---TTAAA
gi|11615 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T--AAAA-GA-G-A---TT-GGAT-GT-TAACG---TTAAA
gi|11616 : TAAATTG-TTTGT-GGA-TTCT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-G--G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11617 : TAAACTG-T--GT-GGA-T-CT-ACTGAAA-T--G--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT--T-AAACG---TTAA
gi|11618 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--T-G--TT-AA---T-AAAAA-GAGG-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11619 : TAAACTG-TT--T-GGA-T-CT--CTGAAA-T--G--A-T--GT-AA-T-A-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11620 : TAAAAGG-TT-GTTGGA-T-CTGACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GA-AAACG---TTAA
gi|11621 : TAAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--GA-A-T--TT-AA-T-T-AAAAA-GA-G-A----T-GGA---T-AGACG---TTAA
gi|11622 : TAAACTG-TT-GT-GGA-T-CA-ACTGAAA-T--G--A-T--GT-AA-T-A-AAAAA-G--G-A-C--T-GGAT-GTAAAACG---TTAAA
gi|11623 : AAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11624 : AAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG----TAAA
gi|11625 : AAACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA---T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG----TAAA
gi|11626 : AAACTG-TT-GT-G-A-T-CT-ACTGAA--T--G--A-T--T--AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAA
gi|11627 : AACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGATATTAAA
gi|11628 : AACTG-TT-GG-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACGA--TTAAA
gi|11629 : AACTG-TT-GT-GGA-T-CT-ACTGAAA-T--G--A-T--GT-AA---T-AAAAA-GA-G-A-C-TT-GGAT-GT-AAACG---TTAAA
gi|11630 : AACTG-T--GT-GGA-T-CT-ACTGAAA-T--G--A-T--TT-AA-T-T-AAAAA-GA-G-A-C-TT-GGAT-GT--AACG---TTAA
gi|11631 : AACTG-TT-GT-GGA-T-CT-A-TGAAA-T--G--A-T--TT-AA-T-T-AAAA--GA-G-A-C-TT-GGAT-GT-AAACGTAATTAAA