8_ACTTGA_L001_R1_001_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 6054818 lines in total Total number of methylation call strings processed: 6054818 Final Cytosine Methylation Report ================================= Total number of C's analysed: 46826991 Total methylated C's in CpG context: 1634958 Total methylated C's in CHG context: 133107 Total methylated C's in CHH context: 1462077 Total C to T conversions in CpG context: 5063044 Total C to T conversions in CHG context: 8842568 Total C to T conversions in CHH context: 29691237 C methylated in CpG context: 24.4% C methylated in CHG context: 1.5% C methylated in CHH context: 4.7%