5_ACAGTG_L001_R1_001_trimmed_bismark_bt2.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.19.0
Bismark result file: single-end (SAM format)
Output specified: strand-specific (default)


Processed 5331269 lines in total
Total number of methylation call strings processed: 5331269

Final Cytosine Methylation Report
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Total number of C's analysed:	41205887

Total methylated C's in CpG context:	1566626
Total methylated C's in CHG context:	117370
Total methylated C's in CHH context:	1337497

Total C to T conversions in CpG context:	4328418
Total C to T conversions in CHG context:	7785820
Total C to T conversions in CHH context:	26070156

C methylated in CpG context:	26.6%
C methylated in CHG context:	1.5%
C methylated in CHH context:	4.9%