# Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008),
# Using native and syntenically mapped cDNA alignments to improve de novo gene finding
# Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013
# No extrinsic information on sequences given.
# Initialising the parameters using config directory /augustus/config/ ...
# Using protein profile unknown
# --[10..473]--> unknown_A (19) <--[31..133]--> unknown_C (33) <--[5..6]--> unknown_D (9) <--[0..1]--> unknown_E (11) <--[7..23]--> unknown_F (14) <--[51..303]--> unknown_J (19) <--[0..6]--> unknown_K (16) <--[16..72]--> unknown_M (18) <--[9..26]--> unknown_O (19) <--[9..154]--> unknown_P (25) <--[0..25]--
# BUSCO_20180911_busco_2432604931 version. Using default transition matrix.
# admissible start codons and their probabilities: ATG(1), CTG(0), TTG(0)
# Looks like ./tmp/Contig14703320180911_busco_2432604931_.temp is in fasta format.
# We have hints for 0 sequences and for 0 of the sequences in the input set.
#
# ----- prediction on sequence number 1 (length = 2025, name = Contig147033) -----
#
# Constraints/Hints:
# (none)
# Predicted genes for sequence number 1 on both strands
# (none)
# command line:
# /augustus/bin/augustus --codingseq=1 --proteinprofile=eukaryota_odb9/prfl/EOG09370GHP.prfl --predictionStart=0  --predictionEnd=22016  --species=BUSCO_20180911_busco_2432604931 ./tmp/Contig14703320180911_busco_2432604931_.temp