Nextflow workflow report

[peaceful_sanger]

Workflow execution completed successfully. One or more tasks reported an error condition.
Run times
15-Jul-2022 11:28:17 - 15-Jul-2022 13:25:00 (duration: 1h 56m 43s)
  13 succeeded  
  0 cached  
  2 ignored  
  4 failed  
Nextflow command
nextflow run epidiverse/wgbs -profile singularity --input /home/shared/8TB_HDD_01/sam/data/O_lurida/BSseq/wgbs-olur-test-fastqs/ --reference /home/shared/8TB_HDD_01/sam/data/O_lurida/genomes/Olurida_v081-mergecat98.fa --INDEX --SE --trim --noLambda --keepBams
CPU-Hours
14.9 (0.3% failed)
Launch directory
/home/shared/8TB_HDD_01/sam/analyses/20220715-olur-nextflow_epidiverse-wgbs
Work directory
/home/shared/8TB_HDD_01/sam/analyses/20220715-olur-nextflow_epidiverse-wgbs/work
Project directory
/home/sam/.nextflow/assets/epidiverse/wgbs
Script name
main.nf
Script ID
85b72a6ad9e17333d3b0ec2919a7bef3
Workflow session
d5040a2a-301c-4ec5-be05-e2de11b53557
Workflow repository
https://github.com/EpiDiverse/wgbs.git, revision master (commit hash 6ae0222545ada30e64eb5bd9f3f4c053958b3d21)
Workflow profile
singularity
Workflow container
epidiverse/wgbs:1.0
Container engine
singularity
Nextflow version
version 20.07.1, build 5412 (24-07-2020 15:18 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)