3494491 reads; of these: 3494491 (100.00%) were paired; of these: 1761769 (50.42%) aligned concordantly 0 times 1648458 (47.17%) aligned concordantly exactly 1 time 84264 (2.41%) aligned concordantly >1 times ---- 1761769 pairs aligned concordantly 0 times; of these: 49525 (2.81%) aligned discordantly 1 time ---- 1712244 pairs aligned 0 times concordantly or discordantly; of these: 3424488 mates make up the pairs; of these: 3103684 (90.63%) aligned 0 times 288718 (8.43%) aligned exactly 1 time 32086 (0.94%) aligned >1 times 55.59% overall alignment rate