cgig_bsseq_all_R1_bismark_bt2.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.19.0
Bismark result file: single-end (SAM format)
Output specified: strand-specific (default)


Processed 1059970 lines in total
Total number of methylation call strings processed: 1059970

Final Cytosine Methylation Report
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Total number of C's analysed:	8975882

Total methylated C's in CpG context:	352949
Total methylated C's in CHG context:	56312
Total methylated C's in CHH context:	106652

Total C to T conversions in CpG context:	1015543
Total C to T conversions in CHG context:	1844998
Total C to T conversions in CHH context:	5599428

C methylated in CpG context:	25.8%
C methylated in CHG context:	3.0%
C methylated in CHH context:	1.9%