File Total Reads Aligned Reads Unaligned Reads Ambiguously Aligned Reads No Genomic Sequence Duplicate Reads (removed) Unique Reads (remaining) Total Cs Methylated CpGs Unmethylated CpGs Methylated CpHs Unmethylated CpHs Methylated CHHs Unmethylated CHHs cgig_bsseq_pe_all_R1_bismark_bt2_pe.bam 1000000 411208 723281 71108 7 16547 394661 2171789 30587 231007 485 358457 1755 1549498