lowQualScore : 11111111111111 11111111111111111111111111111111111111111 11111111111111111111111
lowQualScore : 111 1 1 222222 22 1 1 111 11 00000000000000 1 22 1 33 2222222 44444444444444444444444444444444444444444 555555555555555555555555 1 11 111111 1 1 1 1111 5555 1 1111 2 5555555555555555555 11 2222222222222 11111 00000000000000000000000 222222222 222222222222 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 1 3 5555555555
lowQualScore : 44 0 444 3 8 44 5 5 77 9 6 3 0 3 555555 3 4 0 55 3 3 44 2 3 2 3 777 3 6 99 3 66666666666666 2 5 33 4 1 88 1111111 33333333333333333333333333333333333333333 777777777777777777777777 6 0 44 6 999999 1 8 3 1 2 2 3 3 1 4444 6666 0 4444 3 6 3 1111111111111111111 2 5 9 33 7777777777777 888 22222 22222222222222222222222 000000000 555555555555 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 2 8 0 0 9 5555555555
lowQualScore : .. . ... . . .. . . .. . . . . . ...... . . . .. . . .. . . . . ... . . .. . .............. . . .. . . .. ....... ......................................... ........................ . . .. . ...... . . . . . . . . . .... .... . .... . . . ................... . . . .. ............. ... ..... ....................... ......... ............ ........................................................................................ . . . . . ..........
lowQualScore : 66 8 555 1 8 22 0 0 66 2 0 3 0 3 333333 6 1 2 88 6 6 11 2 3 7 6 999 6 3 55 6 88888888888888 8 4 00 4 0 55 7777777 22222222222222222222222222222222222222222 000000000000000000000000 7 8 33 7 222222 4 0 3 3 3 5 2 5 0 2222 7777 8 2222 3 7 3 7777777777777777777 2 7 6 88 5555555555555 888 55555 00000000000000000000000 000000000 666666666666 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 5 8 5 0 0 5555555555
consensus : TGCGCAAAA--AAGTAA--ATA-ATGGAANACATCATGGATTCAAGTATTCGGG--GTTANTNTGTGTCAGGTTANACAT-A-CCCGGAGACACAAAATGCTGCTGAGCACTGAAAGGGGAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAA-TGG-NAAATCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTCACA-AAAAAGT-TGATGTCGATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTGTATAATACCGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCC-------TTCTTT---------TC--------CTTTTCATTCGTATCAT-----TTCATAACGTGTTATATA---TA--TT-T-------------TTTAAA-TATGTTTGACTTGGAGGTTGTGGGTTCGATTTTTAAAAAGAA-T------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTAAAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCA----TAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TATTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAAAGTTAAATTTTG-GTCACTGTAGAAAATTGTG-------------AAGGTAT---ACACTTTAAATA-----TGAATTA-------GTAC-GAAA-ATAAACTAGTT---------ACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGAATTGAACATGTTCAAGTTATAATGAATAAAAATATGCTCTGTTCTGCTCTTTACTAACATGNCTGTCTGTCTGCCTGCCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTC
Reference ( gi|1 ) : TGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCCGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACTCATGCAACTATGTTATTACGTGAA-TGA-AAAATCATTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTCAC--AAAAAGT-TG--------------AACAACAGACAAAATATTAAATGATGAAATAGTTGTTGTATATAATACCGATGCGTGGCATAGTGGTGTGTATAGTTGACACTTTTACTTATACGACTCTACATCTATTTTGGGTTGAGTTTTCC-------TTCTTT---------TC--------C--------------AT-----TTCATAACGTGTTATATA---T---TT-T-------------TTTAAA-TATGTTTGCCTTGGAGGTTGTGGGTGTGATTTTTAAAAAGAA-T------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTAAAGCTCTGTCATTTATAGGTTGAAAACATGAAGAGAAATACAGCTCGACCAATTTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCATTTGCGGAGATATGGACTGAATCGACATCA----TAG----AACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATGACA----ATACATTTTGTCACGCAATTCACCTT-TTGTTTCACTACCAAAAATACCCTATTCAGCATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAACGTTAAATTTTC-GTCACTGTAGAAAATTGTG-------------AAGGTAT---ACACTTTAAATA-----TGAATTA-------G---------------TAGTT---------ACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGCATTGAACAAGTTCAAGTTATAATGAAT-AAAATATGCTCTGTTCTGATCTTTACTAACATGTCTGTC----TGTCTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAGAC
gi|2 : TGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCCGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACTCATGCAACTATGTTATTACGTGAA-TGA-AAAATCATTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTCAC--AAAAAGT-TG--------------AACAACAGACAAAATATTAAATGATGAAATAGTTGTTGTATATAATACCGATGCGTGGCATAGTGGTGTGTATAGTTGACACTTTTACTTATACGACTCTACATCTATTTTGGGTTGAGTTTTCC-------TTCTTT---------TC--------C--------------AT-----TTCATAACGTGTTATATA---T---TT-T-------------TTTAAA-TATGTTTGCCTTGGAGGTTGTGGGTGTGATTTTTAAAAAGAA-T------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAA
gi|4 : TGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCTGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATATGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTAAGCGTGCAAATATGTTATAACGTGAA-TTTTAAAATCATTGAGAAGTTACACAT-TATAATTATAGTAATTTCGACAGATTCAC--AAAAAGT-TG--------------AACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATTGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCC-------TTCTTTGCTTTTTCATT--------C--------------ATATCTTTTCATAACGTGTTATATA---TATATT-T-------------TTTAAA-TAAGTTTGACTTGGAGGTTGTGGGTTCGATTTTTAAAAAGAA-T------CCAACTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAAAGCGGGCTATATCACACACCCAGAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctgtcatttataggttgaaaacatgaagagaaatacagctcgaccaatttgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagttaccgttagttgaaatgtcatttgcggagatatggactgaatcgacatcatagaacactaatcagattcaagttgccatgcacgtaataaatagtatatgacaatacattttgtcacgcaattcaccttttgtttcactaccaaaaataccctattcagcatcatattacttacaattaaagtactcttgtttgtaaattagtatttaaccaacgttaaattttcgtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtatctactatattaatgacaacgatgcattgaacaagttcaagttataatgaataaaatatgctctgttctgatctttactaacatgtctgtctgtctgtctaacgtgatctgtgggtcaaaattggtgcagggaatttggcagagccttgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|5 : aTGCGCAAAA--AAGTAA--ATA-ATGGAAAACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTCCGGTTAAACAT-A-CCTGGAGATACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATCAGATAAACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAA-TGA-CAAATCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGGCAGATTCAC--AAAGAGT-TG--------------AACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATATTGGTGTATAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCC-------TTCTTT---------TC--------CTTTTCATTCGTATCAT-----TTCATAACGTGTTATATA---T---AA-A-------------TTTAAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTTAAAAAGAA-T------CCAATTGAATATGTTTTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaaactctgtcattttaagttgaaaacatgaagagaaatataactcgacaaaattgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagtaaccgttagttgaaatgtaacttgcggtgatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgcaattcactttcttgtttcactaccaaaaataccctattcaacatcatattatttacaattaaagtacgattgtttttaaattagtatttaaccaaagttaaattttagtcactgtcgaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgg
gi|7 : TGCACAAAA--AAGTAA--ATA-ATGGAAGACATCATTGATTCAAGTATTCGGG--GTTAATATGTGTCCGGTTAAACAT-A-CGCGGAGATAAAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTT--CTTTTTATATCATAAT-CAC-TGAAA-GTGAGCTATTTACGCATGCAGATATGTTATTACGTGAA-TGT-CAAATCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTCAC--AAAAAGC-TG--------------AACAACAGACAAAATCTTAAATGATCAAATAGTTGGTGTATATAACACCGATGCGTGGCATAGTGGTGTGTAGAGCTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTCTC-------TTCTTT---------TC--------CTTTTCATTCGTATCAT-----TTCATAACGTGTTATATA---TA--TT-T-------------TTTAAA-TATGTTTGACTTGGAGGTTGTGGGTTCGATTTTTAAAAAGAA-TTTAAATCCAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatacgtatagctctgtcatttataagttgaaaacatgaagagaaatacagcgaccaaattgcactggaaagtcattgttgtcatcattttattgttgttctgtttccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcttagttggaacacttatcagattcaagttgccatgcacgtaataaatagcatatcaaaatacattttgtcacgcaattcactttcttctttcacttccaaaaatatcctattcaacatcatattatttacaattaaagtactcttgtttgaaaattagtatttaacgaaagttaaattttggtcactgtagaaaattgtgaaagtatacactttaaatatgaattagtacggaaagataaactagttacatgctacacaaccatctctaatatg
gi|13 : aTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAA-TGG-TAAATTATTGAGAAGGTACATAT-TATGATTATAGTCCTTTCGACAGATTCACA-AAAAAGT-TGATGTCGATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTG--GTGTATAATACCGATGCGTAGa
gi|10 : caTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATGCGTGCAAATATGTTATAACGTGAA-TGG-TAAGTTATTGAGAAGGTACATAT-TATGATTATAGTCCTTTCGACAGATTCACA-AAAAAGT-TGATGTCGATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTG--GTGTATAATACCGATGCG-----TAGTGGT
gi|11 : acaTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATATTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATACGTGCAAATATGTTATTACGTGAA-TGG-TAAATTATTGAGAAGGTACATAT-TATGATTAAAGTCCTTTCGACAGATTCACA-AAAAAGT-TGATGTCGATCCGGTAAACAACAGACAAAATCTTAAATGATAAAAAAGTTA--GTGTATAATACCGATGCG-----TAGTGGTc
gi|19 : acaTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACATAA-CCCTGAGACACAAAc
gi|6 : acaCGCAAAAGAAAGTAA--ATA-ATGGAAGACATCATAGATTCAAGTATTCGGG--GTTATTTTG------------CAT----CTGGAGATAC-AGATGCTGCTGAGCACTGAAAAGGGAATTTATATAAGATACACAATCATGTGTTGTT--TTTTTATATTATAAT-CGC-TAAAT-GTGGGCTTTTAACCCGTGCAAATATGTCATTACGTAAATTGT-AA---C----AAAAAGTAAATGTCTAT-ATCATAGTAA---------ATCC----------TGTA--------------AACAACAGACAAAATCGTAAATGATAAAATA-----TATGTATAATACCGATGTG-GGCATAGTGGTTTGTAGAGTTGACACTTTTACTCATACGA----ATGTCTATTTTGGGTTGATTTTTCCCTCTTTTTTCTTT---------TCACTCGTATC--------------AC-----TTCATAACTTGTTATATAACGT---TTATATATATATATATATTTAAA-TATGTTTGACTTGGAGGTTGTGGATTCGA-ATTTAAAACAAA-T------C----TGATTATGTTATGTTTGCACGACAAAAGCGTATTCTGTATAATATATG
gi|12 : GCAAAA--AA-TAATAATA-ATGGAAGTCATCATGGATTCAAGTATTCGGG--GTTATTTTGTGTCAGATTATACAT-A-CCCGGAGACACATA-TGATGCTGA------AAAGGGAAATTCATATAATATACACAGTCATATGTTTT--CTTTTTATATTAAAAA-TAT-TAAAAAGTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAA-TTG-TAAATTATTAAGAAGGTACATAT-AATGATTATAGTCATTTCGACAGATTCACAAAAAAAGT-TGATGTCGATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTG--GTGTATTATACCGATGCGTAGt
gi|3 : acatAAA--AAGTAA--ATA-ATGGAAGACATCATGGATTCAAGTATTCGGG--GTTAATATGTGCTCGTTTAAACAT-A-CCCGGAGATACAAAATGCAGCTGAGCACTAAAAAGGGAATTTTTATCAGATAAACAATCATGTGTTTTTTCTTTTTATATTATAATATATATGAAA-GTGAGCTGTTTACGCGTGCAAATATGTTATTACGTGAA-TGA-CAAATCAGTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTTAC--AAAAAAA-TG--------------AACAACAGACAAA-TCTTAAATGATAAAATAGTTGGCGTATATAATACAGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTGTTTTGGGTTAAGTTTTCC-------TTCTTT---------TC--------CTTTTCATTCGTATCAT-----TTCATAACGTGTTATATG---TA--TT-T-------------TTTAAA-TACGTTTGACTTGGAGGTTGTGGGTTCGATTTTTAAAAAAAAAT------CCAACTGAATATGTATTGTTTACACGACAAAAGCATATGATGTAT-ATAAATGCGGGCTATATCACACACTCAAAA
gi|15 : AA--AAATAATGATA-ATGGAAGACATCATGGATTCAAGTATTCGGG--GTTATTTTGTGTCAGGTTATACAT-A-CCCGGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATTAT-CAC-TAAAA-TTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAA-TGG-TAAATTATTGAGAGGATACATAT-TATGATTATAGTCATTTCGACAGATTCACA-AAAAAGT-TGATGTCGATCCGGTAAACAATAGACAAAATCTTAAATGATAAAATAGTTGGTGTATAT--TACCGATGCGTAGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctggcgtttataagttgaaaacatgaagagaaatacagctcgaccaaattgcactggaaagtcattgttgtcatcatttcattgttgttctttttccatcagttaccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgtaattcactttcttgtttcatcaccaaaataccctattcaacatcatattacttacaattaaagtacgcttgtttgtaaattagtatttaaccaatgttaaattttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacgaccatctctaatttggcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaactttatctactatattaatgacaacgatgaattgaacatgtttaagttataatgaataaaaatatgctctgttctgctctttactaaca
gi|21 : gA--ATATGTGGAAAACGTCATTGATTCAAGTGCACAGGAAGTTAATAT-TGT
gi|2 : ATACGTAAAGCTCTGTCATTTATAGGTTGAAAACATGAAGAGAAATACAGCTCGACCAATTTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCATTTGCGGAGATATGGACTGAATCGACATCA----TAG----AACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATGACA----ATACATTTTGTCACGCAATTCACCTT-TTGTTTCACTACCAAAAATACCCTATTCAGCATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAACGTTAAATTTTC-GTCACTGTAGAAAATTGTG-------------AAGGTAT---ACACTTTAAATA-----TGAATTA-------G---------------TAGTT---------ACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGCATTGAACAAGTTCAAGTTATAATGAAT-AAAATATGCTCTGTTCTGATCTTTACTAACATGTC----TGTCTGTCTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTCctagcacatgcgc
gi|4 : tgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacccggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatgtgtttttctttttatattataatcactgaaagtgagctatttactcatgcaactatgttattacgtgaatgaaaaatcattgagaaggtacacattatgattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatattaaatgatgaaatagttgttgtatataataccgatgcgtggcatagtggtgtgtatagttgacacttttacttatacgactctacatctattttgggttgagttttccttcttttccatttcataacgtgttatatatttttttaaatatgtttgccttggaggttgtgggtgtgatttttaaaaagaatccaattgaatatgtattgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACGTAAAACTCTGTCATTT-TAAGTTGAAAACATGAAGAGAAATATAACTCGACAAAATTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTAACCGTTAGTTGAAATGTAACTTGCGGTGATATGGACTGAAGCGACATCA----TAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TATTTACAATTAAA-GTACGATTGTTTTTAAATTAGTATTTAACCAAAGTTAAATTTTA-GTCACTGTCGAAAATTGTG-------------AAGGTAT---ACACTTTAAATA-----TGAATTA-------G---------------TAGTT---------ACATGCTACACAA------------CCATCTCTAATTTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|5 : atgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacctggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatatgtttttctttttatattataatcactgaaagtgagctatttaagcgtgcaaatatgttataacgtgaattttaaaatcattgagaagttacacattataattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatcttaaatgataaaatagttggtgtatataataccgatgcgtggcattgtggtgtgtagagttgacacttttacttatacgactacatctattttgggttgagttttccttctttgctttttcattcatatcttttcataacgtgttatatatatattttttaaataagtttgacttggaggttgtgggttcgatttttaaaaagaatccaactgaatatgtattgtttacacgacaaaagcatatgctgtatataaaagcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACGTATAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGC--GACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTGTTTCC----------GTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCT----TAGTTGGAACACTTATCAGATTCAAGTTGCCATGCACGTAATAAATAGCATATCAAA----ATACATTTTGTCACGCAATTCACTTTCTTCTTTCACTTCCAAAAATATCCTATTCAACATCATAT-------------------TATTTACAATTAAA-GTACTCTTGTTTGAAAATTAGTATTTAACGAAAGTTAAATTTTG-GTCACTGTAGAAAATTGTG-------------AAAGTAT---ACACTTTAAATA-----TGAATTA-------GTACGGAAAGATAAACTAGTT---------ACATGCTACACAA------------CCATCTCTAATATGg
gi|3 : tgcgcaaaaaagtaaataatggaaaacatcatggattcaagtattcggggttaatatgtgtccggttaaacatacctggagatacaaaatgctgctgagcactgaaaagggaatttatatcagataaacaatcatatgttttctttttatattataatcactgaaagtgagctatttacgcgtgcaaatatgttattacgtgaatgacaaatcattgagaaggtacacattatgattatagtcatttcggcagattcacaaagagttgaacaacagacaaaatcttaaatgataaaatagttggtgtatataataccgatgcgtggcatattggtgtatagagttgacacttttacttatacgactacatctattttgggttgagttttccttcttttccttttcattcgtatcatttcataacgtgttatatataaatttaaaatatgtttgacttggaggttgtgggttcgatttttaaaaagaatccaattgaatatgttttgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntATACGTAAAGCTCTGGCGTTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTCATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCA----TAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGTAATTCACTTTCTTGTTTCATCACC-AAAATACCCTATTCAACATCATAT-------------------TACTTACAATTAAA-GTACGCTTGTTTGTAAATTAGTATTTAACCAATGTTAAATTTTG-GTCACTGTAGAAAATTGTG-------------AAGGTAT---ACACTTTAAATA-----TGAATTA-------G---------------TAGTT---------ACATGCTACACGA------------CCATCTCTAATTTG
gi|9 : aaaaagtaaataatggaagacatcatggattcaagtattcggggttaatatgtgctcgtttaaacatacccggagatacaaaatgcagctgagcactaaaaagggaatttttatcagataaacaatcatgtgttttttctttttatattataatatatatgaaagtgagctgtttacgcgtgcaaatatgttattacgtgaatgacaaatcagtgagaaggtacacattatgattatagtaatttcgacagatttacaaaaaaatgaacaacagacaaatcttaaatgataaaatagttggcgtatataatacagatgcgtggcatagtggtgtgtagagttgacacttttacttatacgactacatctgttttgggttaagttttccttcttttccttttcattcgtatcatttcataacgtgttatatgtattttttaaatacgtttgacttggaggttgtgggttcgatttttaaaaaaaaatccaactgaatatgtattgtttacacgacaaaagcatatgatgtatataaatgcgggctatatcacacactcaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACGTAAAGCTCTGTCACTTATAAGTTGAAAACATGAAGAGAAATACAGC--GACCAAATTGCACTGGAATGTCATTGTTGTCATCATTGTATTGTTGTTCTTTTTCCATCAGGTACCGTTAGTTGAAATTTCACCTGCGGAGATATGGACTGAAGCGACATCA----TAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTTATAAATAGCATATCACA----ATACATTTTGTCATGCTATTCACTTTCTTCTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TAATTACAATTAAA-GTACTCTTGTTTGTTAATTAGTATTTAACCAAAGTT-TATTTTCGGTCACTGTAGAAAATTGTG-------------AAGGTAT---ACACTTTAAATA-----TGAATTA-------GTACTGAAAAATAAACTAGTA---------ACATGCTTCACAA------------CCATCTCTAATTTGgcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaactttatctactatattaatgacaacgatgaattgaacatgtttaagttataatgaataaaaatatgctctgttctgctctttactaaca
gi|8 : TACGTAAAGCTCTGTCATTTATGAGTTGAAAATATGAAGAGAAATACAG--CGATCAAGTTGCACTGGAAATTCATTG---TCACCATT---TTGTTGTTC-TTTTCTATCAGTTTCTGCCAGTTGAAACGTCACTTGTGAAAATTAGGACTCAAGCAGTGTCAAAGTTGG----AACACGAATCAGATTCAGGTTGCCATTCAGGTAATAAAT--TCTATTACACATTATTC-TTTTCTCATGCAAATCACTTT-CT
gi|8 : TTTCACTTCCAAAGATATC--ATTTAAAATCATATCTTGGACACTTTTTTCTATTATTCACAATCAA--GTACTATTGTTTGTAAATTAGTATTTAATAAATGATAAATTTTG-GTCACTGTAGAAAATT-T-----------------GTATTGAATAGTTTAAA------------TA-------G---------------TA------------ACATGCTACACAA------------CCATCTCTAATTTGtgacctacatatttccggaataattgactggattatatttttcacttccaaagatatcatttaaaatcatatcttggacacttttttctattattcacaatcaagtactattgtttgtaaattagtatttaataaatgataaattttggtcactgtagaaaatttgtattgaatagtttaaatagtaacatgctacacaaccatctctaatttgg
gi|14 : tacgtaaagctctgtcatttatgagttgaaaatatgaagagaaatacagcgatcaagttgcactggaaattcattgtcaccattttgttgttcttttctatcagtttctgccagttgaaacgtcacttgtgaaaattaggactcaagcagtgtcaaagttggaacacgaatcagattcaggttgccattcaggtaataaattctattacacattattcttttctcatgcaaatcactttcttgacctacatatttccggaataattgactggattatattTACAATTAAAAGTACTCTTGTTTGTAAGTTAGTATTTAACCAAAGTTAAAATTTG-GTCACTGTAGAAAATTGTG-------------AAGGTAT---ACACTTTAAATA-----TGAATTA-------GTACTGAAAGATAAACTAGTT---------ACATGCTACACAACATGCTACACAGCCATCTCTAATTTGg
gi|16 : TGTTTGTTAATTAATATTTAACAAAAGATAAATTTTG-GTCAATGTAGAAAATTGTGAAACATATCTCTAAAGGTAT---ATACTTTAGATAAAAATTAAATTAAATACTGA---------------TAGTTAAAATAGAAACATGATACACAA------------CTGTCTTTAATTTGgtacacacgcacacgcacacgcacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctcctatattgatgacaacgatgacttgaacatgttcaagttataatgaataaaaatatgctctgttctgccttttacttacatgattgtctgcctgcct
gi|3 : tattgtttagaaggtcatatggttcacaTATCTACTATATTAATGACAACGATGAATTGAACATGTTTAAGTTATAATGAATAAAAATATGCTCTGTTCTGCTCTTTACTAACAgtattttcgttacaatcaccagaccgaactacaaggtactggcagaaatattggctgccgttcgatgtcaaggaggctatgtactaggcacgggatatctattg
gi|17 : aaaaagtaaataatggaagacatcatggattcaagtattcggggttaatatgtgctcgtttaaacatacccggagatacaaaatgcagctgagcactaaaaagggaatttttatcagataaacaatcatgtgttttttctttttatattataatatatatgaaagtgagctgtttacgcgtgcaaatatgttattacgtgaatgacaaatcagtgagaaggtacacattatgattatagtaatttcgacagatttacaaaaaaatgaacaacagacaaatcttaaatgataaaatagttggcgtatataatacagatgcgtggcatagtggtgtgtagagttgacacttttacttatacgactacatctgttttgggttaagttttccttcttttccttttcattcgtatcatttcataacgtgttatatgtattttttaaatacgtttgacttggaggttgtgggttcgatttttaaaaaaaaatccaactgaatatgtattgtttacacgacaaaagcatatgatgtatataaatgcgggctatatcacacactcaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctggcgtttataagttgaaaacatgaagagaaatacagctcgaccaaattgcactggaaagtcattgttgtcatcatttcattgttgttctttttccatcagttaccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgtaattcactttcttgtttcatcaccaaaataccctattcaacatcatattacttacaattaaagtacgcttgtttgtaaattagtatttaaccaatgttaaattttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacgaccatctctaatttggcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaacttTATCTACTATATTAAT---AACGAAGAACTGAACATGTTCAGGTTATAATGAATAAAAATATGCTCTGTTCTGCTCTTTACTAAC
gi|14 : gnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntacttCTCCTATATTGATGACAACGATGACTTGAACATGTTCAAGTTATAATGAATAAAAATATGCTCTGTTCTGCCTTTTACTTACATGATTGTC----TGCCTGCCT
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|18 ): TTTTGTTACAATCACCAGGCCAAACTACAAGGCACTGGCAGAAATCTTGGCTGCCGTTCGATGTCCAGGAGGCTATGGACTAGGCACGGGATATCTATTGG
Unaligned ( gi|20 ): TATAATGAATAAACATAAATCCTCATATTCCTTTTTTGTATCTGAATTTTAGCTTACCTACCTGCCTGTCTGCCTGCC
Alignments
lowQualScore : 11111111111111111111
lowQualScore : 111 1 111111 11 1 66666666666666 11 11 3333333333333333333 111111 11 1111 3333333333333333333 11 2222222222222 11111 00000000000000000000 222222222222 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 333333333333 2222
lowQualScore : 44 222 2 1 33 1 1 3 0 2 3 9 5 999999 3 2 44 3 3 3 1 3 3 0 3 3 1 00000000000000 22 1 55 5 5 77 2222222222222222222 5 666666 6 22 0 0 5 2222 4 8888888888888888888 66 00 2 4444444444444 11111 33333333333333333333 222222222222 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 1 7 99 444444444444 6 2 6 1 3333 0
lowQualScore : .. ... . . .. . . . . . . . . ...... . . .. . . . . . . . . . . .............. .. . .. . . .. ................... . ...... . .. . . . .... . ................... .. .. . ............. ..... .................... ............ ........................................................................................ . . . .. ............ . . . . .... .
lowQualScore : 22 999 9 0 99 0 0 9 8 1 1 2 5 444444 0 5 66 3 3 3 0 3 3 4 3 3 4 77777777777777 44 2 77 7 0 99 1111111111111111111 7 444444 7 77 6 4 0 1111 3 8888888888888888888 11 66 1 4444444444444 11111 88888888888888888888 888888888888 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 6 4 3 22 222222222222 7 5 7 0 0000 7
consensus : TGCGCAAAA--AAGTAA--ATA-ATGGAANACATCATGGATTCAAGTATTCGGG--GTTANTNTGTGTCNGGTTANACAT-A-CCCGGAGACACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATNAGATANACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGGTAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC-AC-AAAAAAGTTGATGTCGATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTC-TTTTCCTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTAAAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TACTTACAA--TTAAA--GTACTCTTGTTTGTAAATTAGTATTTAACCAANGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TAC--G--A----T-AAA-TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGAATTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGNTCTTTA-CTAACATGTCTGTCTGTCTGCCTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTC
Reference ( family-943 ) : TGCGCAAAA--AAGTAA--ATA-ATGGAANACATCATGGATTCAAGTATTCGGG--GTTANTNTGTGTCAGGTTANACAT-A-CCCGGAGACACAAAATGCTGCTGAGCACTGAAAGGGGAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGGNAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC-AC-AAAAAAGTTGATGTCGATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTGTATAATACCGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTC-TTTTCCTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTAAAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TATTTACAA--TTAAA--GTACTCTTGTTTGTAAATTAGTATTTAACCAAAGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TAC--G--AAA-AT-AAACTAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGAATTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCTCTTTA-CTAACATGNCTGTCTGTCTGCCTGCCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTC
gi|1 : TGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCCGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACTCATGCAACTATGTTATTACGTGAATGAAAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTC-AC-AAAAA-GTTGA--------------ACAACAGACAAAATATTAAATGATGAAATAGTTGTTGTATATAATACCGATGCGTGGCATAGTGGTGTGTATAGTTGACACTTTTACTTATACGACTCTACATCTATTTTGGGTTGAGTTTTCCTTC-TTTTCC--------------ATTTCATAACGTGT--TATATA-----T-T-----------TTTTTAAATATGTTTGCCTTGGAGGTTGTGGGTGTGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAA
gi|1 : ATACGTAAAGCTCTGTCATTTATAGGTTGAAAACATGAAGAGAAATACAGCTCGACCAATTTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCATTTGCGGAGATATGGACTGAATCGACATCATAG----AACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATGACA----ATACATTTTGTCACGCAATTCACCTT-TTGTTTCACTACCAAAAATACCCTATTCAGCATCATAT-------------------TACTTACAA--TTAAA--GTACTCTTGTTTGTAAATTAGTATTTAACCAACGTTAAATTTTCGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG--------------------TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGCATTGAACAAGTTCAAGTTATAATGAAT-AAAATA--TGCTC------------TGT-TCTGATCTTTA-CTAACATGTCTGTCTGT----CTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctgtcatttataggttgaaaacatgaagagaaatacagctcgaccaatttgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagttaccgttagttgaaatgtcatttgcggagatatggactgaatcgacatcatagaacactaatcagattcaagttgccatgcacgtaataaatagtatatgacaatacattttgtcacgcaattcaccttttgtttcactaccaaaaataccctattcagcatcatattacttacaattaaagtactcttgtttgtaaattagtatttaaccaacgttaaattttcgtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtatctactatattaatgacaacgatgcattgaacaagttcaagttataatgaataaaatatgctctgttctgatctttactaacatgtctgtctgtctgtctaacgtgatctgtgggtcaaaattggtgcagggaatttggcagagccttgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|10 : tgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacccggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatgtgtttttctttttatattataatcactgaaagtgagctatttactcatgcaactatgttattacgtgaatgaaaaatcattgagaaggtacacattatgattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatattaaatgatgaaatagttgttgtatataataccgatgcgtggcatagtggtgtgtatagttgacacttttacttatacgactctacatctattttgggttgagttttccttcttttccatttcataacgtgttatatatttttttaaatatgtttgccttggaggttgtgggtgtgatttttaaaaagaatccaattgaatatgtattgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATGCGTGCAAATATGTTATAACGTGAATGGTAAG-TTATTGAGAAGGTACATAT-TATGATTATAGTCCTTTCGACAGATTC-AC-AAAAAAGTTGATGTCGATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTG--GTGTATAATACCGATGCG-----TAGTGGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|11 : acaTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATATTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATACGTGCAAATATGTTATTACGTGAATGGTAAA-TTATTGAGAAGGTACATAT-TATGATTAAAGTCCTTTCGACAGATTC-AC-AAAAAAGTTGATGTCGATCCGGTAAACAACAGACAAAATCTTAAATGATAAAAAAGTTA--GTGTATAATACCGATGCG-----TAGTGGTc
gi|12 : acaGCAAAA--AA-TAATAATA-ATGGAAGTCATCATGGATTCAAGTATTCGGG--GTTATTTTGTGTCAGATTATACAT-A-CCCGGAGACACATA-TGATGCTGA------AAAGGGAAATTCATATAATATACACAGTCATATGTTTT--CTTTTTATATTAAAAA-TAT-TAAAAAGTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAATTGTAAA-TTATTAAGAAGGTACATAT-AATGATTATAGTCATTTCGACAGATTC-ACAAAAAAAGTTGATGTCGATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTG--GTGTATTATACCGATGCGTAGc
gi|13 : acatTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAATGGTAAA-TTATTGAGAAGGTACATAT-TATGATTATAGTCCTTTCGACAGATTC-AC-AAAAAAGTTGATGTCGATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTG--GTGTATAATACCGATGCGTAG
gi|14 : caTACAA--TTAAAA-GTACTCTTGTTTGTAAGTTAGTATTTAACCAAAGTTAAAATTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TACT-G--AAAGAT-AAACTAGTTACATGCTACACAACATGCTACACAGCCATCTCTAATTTG
gi|14 : CTCCTATATTGATGACAACGATGACTTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCCTTTTA-CTTACATGATTGTCTGCCTGCCTgtacacacgcacacgcacacgcacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctcctatattgatgacaacgatgacttgaacatgttcaagttataatgaataaaaatatgctctgttctgccttttacttacatgattgtctgcctgcct
gi|15 : tacaattaaaagtactcttgtttgtaagttagtatttaaccaaagttaaaatttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtactgaaagataaactagttacatgctacacaacatgctacacagccatctctaatttggtacacacgcacacgcacacgcacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncAA--AAATAATGATA-ATGGAAGACATCATGGATTCAAGTATTCGGG--GTTATTTTGTGTCAGGTTATACAT-A-CCCGGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATTAT-CAC-TAAAA-TTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAATGGTAAA-TTATTGAGAGGATACATAT-TATGATTATAGTCATTTCGACAGATTC-AC-AAAAAAGTTGATGTCGATCCGGTAAACAATAGACAAAATCTTAAATGATAAAATAGTTGGTGTATAT--TACCGATGCGTAG
gi|16 : gTAT-------------------TGTTTAGAAGGTCATATGGTTCACATGTTTGTTAATTAATATTTAACAAAAGATAAATTTTGGTCAATGTAGAAAATTGTGAAACATATCTCTAAAGGTATATACTTTAGATAAAAATTAAATTAAATACT-G--ATA-GTTAAAATAGAAACATGATACACAA------------CTGTCTTTAATTTG
gi|17 : TATCTACTATATTAAT---AACGAAGAACTGAACATGTTCAGGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCTCTTTA-CTAACgtattttcgttacaatcaccagaccgaactacaaggtactggcagaaatattggctgccgttcgatgtcaaggaggctatgtactaggcacgggatatctattg
gi|19 : gnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntacttTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACATAA-CCCTGAGACACAAA
gi|2 : acaTGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCCGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACTCATGCAACTATGTTATTACGTGAATGAAAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTC-AC-AAAAA-GTTGA--------------ACAACAGACAAAATATTAAATGATGAAATAGTTGTTGTATATAATACCGATGCGTGGCATAGTGGTGTGTATAGTTGACACTTTTACTTATACGACTCTACATCTATTTTGGGTTGAGTTTTCCTTC-TTTTCC--------------ATTTCATAACGTGT--TATATA-----T-T-----------TTTTTAAATATGTTTGCCTTGGAGGTTGTGGGTGTGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAA
gi|2 : ATACGTAAAGCTCTGTCATTTATAGGTTGAAAACATGAAGAGAAATACAGCTCGACCAATTTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCATTTGCGGAGATATGGACTGAATCGACATCATAG----AACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATGACA----ATACATTTTGTCACGCAATTCACCTT-TTGTTTCACTACCAAAAATACCCTATTCAGCATCATAT-------------------TACTTACAA--TTAAA--GTACTCTTGTTTGTAAATTAGTATTTAACCAACGTTAAATTTTCGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG--------------------TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGCATTGAACAAGTTCAAGTTATAATGAAT-AAAATA--TGCTC------------TGT-TCTGATCTTTA-CTAACATGTCTGTCTGT----CTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctgtcatttataggttgaaaacatgaagagaaatacagctcgaccaatttgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagttaccgttagttgaaatgtcatttgcggagatatggactgaatcgacatcatagaacactaatcagattcaagttgccatgcacgtaataaatagtatatgacaatacattttgtcacgcaattcaccttttgtttcactaccaaaaataccctattcagcatcatattacttacaattaaagtactcttgtttgtaaattagtatttaaccaacgttaaattttcgtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtatctactatattaatgacaacgatgcattgaacaagttcaagttataatgaataaaatatgctctgttctgatctttactaacatgtctgtctgtctgtctaacgtgatctgtgggtcaaaattggtgcagggaatttggcagagccttgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|20 : tgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacccggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatgtgtttttctttttatattataatcactgaaagtgagctatttactcatgcaactatgttattacgtgaatgaaaaatcattgagaaggtacacattatgattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatattaaatgatgaaatagttgttgtatataataccgatgcgtggcatagtggtgtgtatagttgacacttttacttatacgactctacatctattttgggttgagttttccttcttttccatttcataacgtgttatatatttttttaaatatgtttgccttggaggttgtgggtgtgatttttaaaaagaatccaattgaatatgtattgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATAATGAATAAACATAAATCCTCATATTCCTTTTTTGTATCTGAATTTTAGCTTACCTACCTGCCTGTCTGCCTGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|21 : A--ATATGTGGAAAACGTCATTGATTCAAGTGCACAGGAAGTTAATAT-TGTC
gi|3 : AAA--AAGTAA--ATA-ATGGAAGACATCATGGATTCAAGTATTCGGG--GTTAATATGTGCTCGTTTAAACAT-A-CCCGGAGATACAAAATGCAGCTGAGCACTAAAAAGGGAATTTTTATCAGATAAACAATCATGTGTTTTTTCTTTTTATATTATAATATATATGAAA-GTGAGCTGTTTACGCGTGCAAATATGTTATTACGTGAATGACAAA-TCAGTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTT-AC-AAAAAA----ATG-----------AACAACAGACAAA-TCTTAAATGATAAAATAGTTGGCGTATATAATACAGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTGTTTTGGGTTAAGTTTTCCTTC-TTTTCCTTTTCATTCGTATCATTTCATAACGTGT--TATATG-----TAT-----------TTTTTAAATACGTTTGACTTGGAGGTTGTGGGTTCGATTTTTAAAAAAAAAT------CCAACTGAATATGTATTGTTTACACGACAAAAGCATATGATGTAT-ATAAATGCGGGCTATATCACACACTCAAAAtagcacatgcgc
gi|3 : ATACGTAAAGCTCTGGCGTTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTCATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGTAATTCACTTTCTTGTTTCATCACC-AAAATACCCTATTCAACATCATAT-------------------TACTTACAA--TTAAA--GTACGCTTGTTTGTAAATTAGTATTTAACCAATGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG--------------------TAGTTACATGCTACACGA------------CCATCTCTAATTTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctggcgtttataagttgaaaacatgaagagaaatacagctcgaccaaattgcactggaaagtcattgttgtcatcatttcattgttgttctttttccatcagttaccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgtaattcactttcttgtttcatcaccaaaataccctattcaacatcatattacttacaattaaagtacgcttgtttgtaaattagtatttaaccaatgttaaattttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacgaccatctctaatttggcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaactttatctactatattaatgacaacgatgaattgaacatgtttaagttataatgaataaaaatatgctctgttctgctctttactaaca
gi|3 : aaaaagtaaataatggaagacatcatggattcaagtattcggggttaatatgtgctcgtttaaacatacccggagatacaaaatgcagctgagcactaaaaagggaatttttatcagataaacaatcatgtgttttttctttttatattataatatatatgaaagtgagctgtttacgcgtgcaaatatgttattacgtgaatgacaaatcagtgagaaggtacacattatgattatagtaatttcgacagatttacaaaaaaatgaacaacagacaaatcttaaatgataaaatagttggcgtatataatacagatgcgtggcatagtggtgtgtagagttgacacttttacttatacgactacatctgttttgggttaagttttccttcttttccttttcattcgtatcatttcataacgtgttatatgtattttttaaatacgtttgacttggaggttgtgggttcgatttttaaaaaaaaatccaactgaatatgtattgtttacacgacaaaagcatatgatgtatataaatgcgggctatatcacacactcaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATCTACTATATTAATGACAACGATGAATTGAACATGTTTAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCTCTTTA-CTAACAgcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaactttatctactatattaatgacaacgatgaattgaacatgtttaagttataatgaataaaaatatgctctgttctgctctttactaaca
gi|4 : aaaaagtaaataatggaagacatcatggattcaagtattcggggttaatatgtgctcgtttaaacatacccggagatacaaaatgcagctgagcactaaaaagggaatttttatcagataaacaatcatgtgttttttctttttatattataatatatatgaaagtgagctgtttacgcgtgcaaatatgttattacgtgaatgacaaatcagtgagaaggtacacattatgattatagtaatttcgacagatttacaaaaaaatgaacaacagacaaatcttaaatgataaaatagttggcgtatataatacagatgcgtggcatagtggtgtgtagagttgacacttttacttatacgactacatctgttttgggttaagttttccttcttttccttttcattcgtatcatttcataacgtgttatatgtattttttaaatacgtttgacttggaggttgtgggttcgatttttaaaaaaaaatccaactgaatatgtattgtttacacgacaaaagcatatgatgtatataaatgcgggctatatcacacactcaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctggcgtttataagttgaaaacatgaagagaaatacagctcgaccaaattgcactggaaagtcattgttgtcatcatttcattgttgttctttttccatcagttaccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgtaattcactttcttgtttcatcaccaaaataccctattcaacatcatattacttacaattaaagtacgcttgtttgtaaattagtatttaaccaatgttaaattttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacgaccatctctaatttggcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaacttTGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCTGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATATGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTAAGCGTGCAAATATGTTATAACGTGAATTTTAAAATCATTGAGAAGTTACACAT-TATAATTATAGTAATTTCGACAGATTC-AC-AAAAA-GTTGA--------------ACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATTGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTC-TTTGCTTTTTCATTCATATCTTTTCATAACGTGTTATATATA-----TAT-----------TTTTTAAATAAGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAACTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAAAGCGGGCTATATCACACACCCAGAA
gi|4 : aATACGTAAAACTCTGTCATTT-TAAGTTGAAAACATGAAGAGAAATATAACTCGACAAAATTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTAACCGTTAGTTGAAATGTAACTTGCGGTGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TATTTACAA--TTAAA--GTACGATTGTTTTTAAATTAGTATTTAACCAAAGTTAAATTTTAGTCACTGTCGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG--------------------TAGTTACATGCTACACAA------------CCATCTCTAATTTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaaactctgtcattttaagttgaaaacatgaagagaaatataactcgacaaaattgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagtaaccgttagttgaaatgtaacttgcggtgatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgcaattcactttcttgtttcactaccaaaaataccctattcaacatcatattatttacaattaaagtacgattgtttttaaattagtatttaaccaaagttaaattttagtcactgtcgaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgg
gi|5 : atgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacctggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatatgtttttctttttatattataatcactgaaagtgagctatttaagcgtgcaaatatgttataacgtgaattttaaaatcattgagaagttacacattataattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatcttaaatgataaaatagttggtgtatataataccgatgcgtggcattgtggtgtgtagagttgacacttttacttatacgactacatctattttgggttgagttttccttctttgctttttcattcatatcttttcataacgtgttatatatatattttttaaataagtttgacttggaggttgtgggttcgatttttaaaaagaatccaactgaatatgtattgtttacacgacaaaagcatatgctgtatataaaagcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGCGCAAAA--AAGTAA--ATA-ATGGAAAACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTCCGGTTAAACAT-A-CCTGGAGATACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATCAGATAAACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGACAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGGCAGATTC-AC-AAAGA-GTTGA--------------ACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATATTGGTGTATAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTC-TTTTCCTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAA-----------ATTTAAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTTTTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAAg
gi|5 : ATACGTATAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGC--GACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTGTTTCC----------GTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCTTAGTTGGAACACTTATCAGATTCAAGTTGCCATGCACGTAATAAATAGCATATCAAA----ATACATTTTGTCACGCAATTCACTTTCTTCTTTCACTTCCAAAAATATCCTATTCAACATCATAT-------------------TATTTACAA--TTAAA--GTACTCTTGTTTGAAAATTAGTATTTAACGAAAGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------AGTATACACTTTAAATA-----TGAATTAG-TAC--GGAAAG-AT-AAACTAGTTACATGCTACACAA------------CCATCTCTAATATGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatacgtatagctctgtcatttataagttgaaaacatgaagagaaatacagcgaccaaattgcactggaaagtcattgttgtcatcattttattgttgttctgtttccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcttagttggaacacttatcagattcaagttgccatgcacgtaataaatagcatatcaaaatacattttgtcacgcaattcactttcttctttcacttccaaaaatatcctattcaacatcatattatttacaattaaagtactcttgtttgaaaattagtatttaacgaaagttaaattttggtcactgtagaaaattgtgaaagtatacactttaaatatgaattagtacggaaagataaactagttacatgctacacaaccatctctaatatg
gi|6 : tgcgcaaaaaagtaaataatggaaaacatcatggattcaagtattcggggttaatatgtgtccggttaaacatacctggagatacaaaatgctgctgagcactgaaaagggaatttatatcagataaacaatcatatgttttctttttatattataatcactgaaagtgagctatttacgcgtgcaaatatgttattacgtgaatgacaaatcattgagaaggtacacattatgattatagtcatttcggcagattcacaaagagttgaacaacagacaaaatcttaaatgataaaatagttggtgtatataataccgatgcgtggcatattggtgtatagagttgacacttttacttatacgactacatctattttgggttgagttttccttcttttccttttcattcgtatcatttcataacgtgttatatataaatttaaaatatgtttgacttggaggttgtgggttcgatttttaaaaagaatccaattgaatatgttttgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntCGCAAAAGAAAGTAA--ATA-ATGGAAGACATCATAGATTCAAGTATTCGGG--GTTATTTTG------------CAT----CTGGAGATACAGA-TGCTGCTGAGCACTGAAAAGGGAATTTATATAAGATACACAATCATGTGTTGT--TTTTTTATATTATAAT-CGC-TAAAT-GTGGGCTTTTAACCCGTGCAAATATGTCATTACGTAAATTGTAA---C----AAAAAGTAAATGTCTAT-ATCATAGTAAATCCTGTAAA--CAAC-AGACAA---------AATC--GTAAAT----GATAAAATAT---ATG-TATAATA-CCGATGTG----------------GGCATAGTGGTTTGTAGAGTTGACACTTTTACTCATACGA----ATGTCTATTTTGGGTTGATTTTTCCCTCTTTTTTCTTTTCACTCGTATCACTTCATAACTTGT--TATATAACGTTTATATATATATATATATTTAAATATGTTTGACTTGGAGGTTGTGGATTCGA-ATTT-AAAACAAAT------C----TGATTATGTTATGTTTGCACGACAAAAGCGTATTCTGTATAATATATG
gi|7 : TGCACAAAA--AAGTAA--ATA-ATGGAAGACATCATTGATTCAAGTATTCGGG--GTTAATATGTGTCCGGTTAAACAT-A-CGCGGAGATAAAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTT--CTTTTTATATCATAAT-CAC-TGAAA-GTGAGCTATTTACGCATGCAGATATGTTATTACGTGAATGTCAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC-AC-AAAAA-GCTGA--------------ACAACAGACAAAATCTTAAATGATCAAATAGTTGGTGTATATAACACCGATGCGTGGCATAGTGGTGTGTAGAGCTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTCTCTTC-TTTTCCTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAATTTAAATCCAATTt
gi|8 : aTACGTAAAGCTCTGTCATTTATGAGTTGAAAATATGAAGAGAAATACAGC--GATCAAGTTGCACTGGAAATTCATTGT---CACCATTTT---GTTGTTCTTTT-CTATCAGTTTCTGCCAGTTGAAACGTCACTTGTGAAAATTAGGACTCAAGCAGTGTCAAAGTTGGAACACGAATCAGATTCAGGTTGCCATTCAGGTAATAAAT--TCTATTACACATTATTC-TTTTCTCATGCAAATCACTTTCTTGa
gi|8 : TTTCACTTCCAAAGATATC--ATTTAAAATCATATCTTGGACACTTTTTTCTATTATTCACAA--TCAA---GTACTATTGTTTGTAAATTAGTATTTAATAAATGATAAATTTTGGTCACTGTAGAAAATT-T-----------------GTAT-----------------TGAA-TAG-T-----------TT-AAA-TAGTAACATGCTACACAA------------CCATCTCTAATTTGacctacatatttccggaataattgactggattatatttttcacttccaaagatatcatttaaaatcatatcttggacacttttttctattattcacaatcaagtactattgtttgtaaattagtatttaataaatgataaattttggtcactgtagaaaatttgtattgaatagtttaaatagtaacatgctacacaaccatctctaatttgg
gi|9 : tacgtaaagctctgtcatttatgagttgaaaatatgaagagaaatacagcgatcaagttgcactggaaattcattgtcaccattttgttgttcttttctatcagtttctgccagttgaaacgtcacttgtgaaaattaggactcaagcagtgtcaaagttggaacacgaatcagattcaggttgccattcaggtaataaattctattacacattattcttttctcatgcaaatcactttcttgacctacatatttccggaataattgactggattatattATACGTAAAGCTCTGTCACTTATAAGTTGAAAACATGAAGAGAAATACAGC--GACCAAATTGCACTGGAATGTCATTGTTGTCATCATTGTATTGTTGTTCTTTTTCCATCAGGTACCGTTAGTTGAAATTTCACCTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTTATAAATAGCATATCACA----ATACATTTTGTCATGCTATTCACTTTCTTCTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TAATTACAA--TTAAA--GTACTCTTGTTTGTTAATTAGTATTTAACCAAAGTTTATTTTCGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TACTGA--AAA-AT-AAACTAGTAACATGCTTCACAA------------CCATCTCTAATTTGg
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|18 ): TTTTGTTACAATCACCAGGCCAAACTACAAGGCACTGGCAGAAATCTTGGCTGCCGTTCGATGTCCAGGAGGCTATGGACTAGGCACGGGATATCTATTGG
Alignments
lowQualScore : 111111111111111111111
lowQualScore : 111 1 111111 11 1 66666666666666666666666666 11 3333333333333333333 111111 11 1111 4444444444444444444 2222222222222 11111 000000000000000000000 222222222222 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 333333333333 2222
lowQualScore : 44 222 2 1 33 1 1 2 0 2 2 8 1 999999 1 1 44 3 3 3 3 3 44 3 5 55555555555555555555555555 3 3 55 5 5 77 2222222222222222222 5 666666 6 22 0 0 5 2222 4 4444444444444444444 0 5 1 4444444444444 11111 777777777777777777777 222222222222 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 1 7 99 444444444444 6 1 6 1 3333
lowQualScore : .. ... . . .. . . . . . . . . ...... . . .. . . . . . .. . . .......................... . . .. . . .. ................... . ...... . .. . . . .... . ................... . . . ............. ..... ..................... ............ ........................................................................................ . . . .. ............ . . . . ....
lowQualScore : 22 999 9 0 99 0 0 0 1 0 9 6 4 444444 0 0 66 3 3 3 3 3 66 3 5 44444444444444444444444444 2 2 77 7 0 99 1111111111111111111 7 444444 7 77 6 4 0 1111 3 3333333333333333333 4 0 0 4444444444444 11111 333333333333333333333 888888888888 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 6 4 3 22 222222222222 7 0 7 2 0000
consensus : TGCGCAAAA--AAGTAA--ATA-ATGGAANACATCATGGATTCAAGTATTCGGG--GTTANTNTGTGTCNGGTTANACAT-A-CCCGGAGACACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATNAGATANACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGGTAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTAAAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAANGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TAC-----GATA-----AA-TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGAATTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGNTCTTTA-CTAACATGTCTGTCTGTCTGCCTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTC
Reference ( family-943 ) : TGCGCAAAA--AAGTAA--ATA-ATGGAANACATCATGGATTCAAGTATTCGGG--GTTANTNTGTGTCNGGTTANACAT-A-CCCGGAGACACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATNAGATANACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGGTAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTAAAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAANGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TAC-----GATA-----AA-TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGAATTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGNTCTTTA-CTAACATGTCTGTCTGTCTGCCTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTC
gi|1 : TGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCCGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACTCATGCAACTATGTTATTACGTGAATGAAAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTC--AC-AAAAA-GTTGA--------------------------ACAACAGACAAAATATTAAATGATGAAATAGTTGTTGTATATAATACCGATGCGTGGCATAGTGGTGTGTATAGTTGACACTTTTACTTATACGACTCTACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-C--------------ATTTCATAACGTGT--TATATA-----T-T-----------TTTTTAAATATGTTTGCCTTGGAGGTTGTGGGTGTGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAA
gi|1 : ATACGTAAAGCTCTGTCATTTATAGGTTGAAAACATGAAGAGAAATACAGCTCGACCAATTTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCATTTGCGGAGATATGGACTGAATCGACATCATAG----AACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATGACA----ATACATTTTGTCACGCAATTCACCTT-TTGTTTCACTACCAAAAATACCCTATTCAGCATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAACGTTAAATTTTCGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG---------------------TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGCATTGAACAAGTTCAAGTTATAATGAAT-AAAATA--TGCTC------------TGT-TCTGATCTTTA-CTAACATGTCTGTCTGT----CTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctgtcatttataggttgaaaacatgaagagaaatacagctcgaccaatttgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagttaccgttagttgaaatgtcatttgcggagatatggactgaatcgacatcatagaacactaatcagattcaagttgccatgcacgtaataaatagtatatgacaatacattttgtcacgcaattcaccttttgtttcactaccaaaaataccctattcagcatcatattacttacaattaaagtactcttgtttgtaaattagtatttaaccaacgttaaattttcgtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtatctactatattaatgacaacgatgcattgaacaagttcaagttataatgaataaaatatgctctgttctgatctttactaacatgtctgtctgtctgtctaacgtgatctgtgggtcaaaattggtgcagggaatttggcagagccttgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|10 : tgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacccggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatgtgtttttctttttatattataatcactgaaagtgagctatttactcatgcaactatgttattacgtgaatgaaaaatcattgagaaggtacacattatgattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatattaaatgatgaaatagttgttgtatataataccgatgcgtggcatagtggtgtgtatagttgacacttttacttatacgactctacatctattttgggttgagttttccttcttttccatttcataacgtgttatatatttttttaaatatgtttgccttggaggttgtgggtgtgatttttaaaaagaatccaattgaatatgtattgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATGCGTGCAAATATGTTATAACGTGAATGGTAAG-TTATTGAGAAGGTACATAT-TATGATTATAGTCCTTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTG--TATAATACCGATGCG-----TAGTGGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|11 : acaTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATATTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATACGTGCAAATATGTTATTACGTGAATGGTAAA-TTATTGAGAAGGTACATAT-TATGATTAAAGTCCTTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAAAAGTTAGTG--TATAATACCGATGCG-----TAGTGGTc
gi|12 : acaGCAAAA--AA-TAATAATA-ATGGAAGTCATCATGGATTCAAGTATTCGGG--GTTATTTTGTGTCAGATTATACAT-A-CCCGGAGACACATA-TGATGCTGA------AAAGGGAAATTCATATAATATACACAGTCATATGTTTT--CTTTTTATATTAAAAA-TAT-TAAAAAGTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAATTGTAAA-TTATTAAGAAGGTACATAT-AATGATTATAGTCATTTCGACAGATTC--ACAAAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTAT-T-ATACCGATGCGTAGc
gi|13 : acatTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAATGGTAAA-TTATTGAGAAGGTACATAT-TATGATTATAGTCCTTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTG--TATAATACCGATGCGTAG
gi|14 : caTACAATTAAAAGTACTCTTGTTTGTAAGTTAGTATTTAACCAAAGTTAAAATTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TACTGAAAGATA-----AACTAGTTACATGCTACACAACATGCTACACAGCCATCTCTAATTTG
gi|14 : CTCCTATATTGATGACAACGATGACTTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCCTTTTA-CTTACATGATTGTCTGCCTGCCTgtacacacgcacacgcacacgcacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctcctatattgatgacaacgatgacttgaacatgttcaagttataatgaataaaaatatgctctgttctgccttttacttacatgattgtctgcctgcct
gi|15 : tacaattaaaagtactcttgtttgtaagttagtatttaaccaaagttaaaatttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtactgaaagataaactagttacatgctacacaacatgctacacagccatctctaatttggtacacacgcacacgcacacgcacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncAA--AAATAATGATA-ATGGAAGACATCATGGATTCAAGTATTCGGG--GTTATTTTGTGTCAGGTTATACAT-A-CCCGGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATTAT-CAC-TAAAA-TTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAATGGTAAA-TTATTGAGAGGATACATAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAATAGACAAAATCTTAAATGATAAAATAGTTGGTGTATAT--TACCGATGCGTAG
gi|16 : gTGTTTGTTAATTAATATTTAACAAAAGATAAATTTTGGTCAATGTAGAAAATTGTGAAACATATCTCTAAAGGTATATACTTTAGATAAAAATTAAATTAAATACT----GATAGTTAAAA-TAGAAACATGATACACAA------------CTGTCTTTAATTTG
gi|17 : tattgtttagaaggtcatatggttcacaTATCTACTATATTAAT---AACGAAGAACTGAACATGTTCAGGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCTCTTTA-CTAACgtattttcgttacaatcaccagaccgaactacaaggtactggcagaaatattggctgccgttcgatgtcaaggaggctatgtactaggcacgggatatctattg
gi|19 : gnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntacttTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACATAA-CCCTGAGACACAAA
gi|2 : acaTGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCCGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACTCATGCAACTATGTTATTACGTGAATGAAAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTC--AC-AAAAA-GTTGA--------------------------ACAACAGACAAAATATTAAATGATGAAATAGTTGTTGTATATAATACCGATGCGTGGCATAGTGGTGTGTATAGTTGACACTTTTACTTATACGACTCTACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-C--------------ATTTCATAACGTGT--TATATA-----T-T-----------TTTTTAAATATGTTTGCCTTGGAGGTTGTGGGTGTGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAA
gi|2 : ATACGTAAAGCTCTGTCATTTATAGGTTGAAAACATGAAGAGAAATACAGCTCGACCAATTTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCATTTGCGGAGATATGGACTGAATCGACATCATAG----AACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATGACA----ATACATTTTGTCACGCAATTCACCTT-TTGTTTCACTACCAAAAATACCCTATTCAGCATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAACGTTAAATTTTCGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG---------------------TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGCATTGAACAAGTTCAAGTTATAATGAAT-AAAATA--TGCTC------------TGT-TCTGATCTTTA-CTAACATGTCTGTCTGT----CTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctgtcatttataggttgaaaacatgaagagaaatacagctcgaccaatttgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagttaccgttagttgaaatgtcatttgcggagatatggactgaatcgacatcatagaacactaatcagattcaagttgccatgcacgtaataaatagtatatgacaatacattttgtcacgcaattcaccttttgtttcactaccaaaaataccctattcagcatcatattacttacaattaaagtactcttgtttgtaaattagtatttaaccaacgttaaattttcgtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtatctactatattaatgacaacgatgcattgaacaagttcaagttataatgaataaaatatgctctgttctgatctttactaacatgtctgtctgtctgtctaacgtgatctgtgggtcaaaattggtgcagggaatttggcagagccttgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|20 : tgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacccggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatgtgtttttctttttatattataatcactgaaagtgagctatttactcatgcaactatgttattacgtgaatgaaaaatcattgagaaggtacacattatgattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatattaaatgatgaaatagttgttgtatataataccgatgcgtggcatagtggtgtgtatagttgacacttttacttatacgactctacatctattttgggttgagttttccttcttttccatttcataacgtgttatatatttttttaaatatgtttgccttggaggttgtgggtgtgatttttaaaaagaatccaattgaatatgtattgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATAATGAATAAACATAAATCCTCATATTCCTTTTTTGTATCTGAATTTTAGCTTACCTACCTGCCTGTCTGCCTGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|21 : A--ATATGTGGAAAACGTCATTGATTCAAGTGCACAGGAAGTTAATAT-TGTCTAG---CACAT-G-C
gi|3 : AAA--AAGTAA--ATA-ATGGAAGACATCATGGATTCAAGTATTCGGG--GTTAATATGTGCTCGTTTAAACAT-A-CCCGGAGATACAAAATGCAGCTGAGCACTAAAAAGGGAATTTTTATCAGATAAACAATCATGTGTTTTTTCTTTTTATATTATAATATATATGAAA-GTGAGCTGTTTACGCGTGCAAATATGTTATTACGTGAATGACAAA-TCAGTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTT--AC-AAAAAA----ATG-----------------------AACAACAGACAAA-TCTTAAATGATAAAATAGTTGGCGTATATAATACAGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTGTTTTGGGTTAAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATG-----TAT-----------TTTTTAAATACGTTTGACTTGGAGGTTGTGGGTTCGATTTTTAAAAAAAAAT------CCAACTGAATATGTATTGTTTACACGACAAAAGCATATGATGTAT-ATAAATGCGGGCTATATCACACACTCAAAAgc
gi|3 : ATACGTAAAGCTCTGGCGTTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTCATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGTAATTCACTTTCTTGTTTCATCACC-AAAATACCCTATTCAACATCATAT-------------------TACTTACAATTAAA-GTACGCTTGTTTGTAAATTAGTATTTAACCAATGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG---------------------TAGTTACATGCTACACGA------------CCATCTCTAATTTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctggcgtttataagttgaaaacatgaagagaaatacagctcgaccaaattgcactggaaagtcattgttgtcatcatttcattgttgttctttttccatcagttaccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgtaattcactttcttgtttcatcaccaaaataccctattcaacatcatattacttacaattaaagtacgcttgtttgtaaattagtatttaaccaatgttaaattttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacgaccatctctaatttggcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaactttatctactatattaatgacaacgatgaattgaacatgtttaagttataatgaataaaaatatgctctgttctgctctttactaaca
gi|3 : aaaaagtaaataatggaagacatcatggattcaagtattcggggttaatatgtgctcgtttaaacatacccggagatacaaaatgcagctgagcactaaaaagggaatttttatcagataaacaatcatgtgttttttctttttatattataatatatatgaaagtgagctgtttacgcgtgcaaatatgttattacgtgaatgacaaatcagtgagaaggtacacattatgattatagtaatttcgacagatttacaaaaaaatgaacaacagacaaatcttaaatgataaaatagttggcgtatataatacagatgcgtggcatagtggtgtgtagagttgacacttttacttatacgactacatctgttttgggttaagttttccttcttttccttttcattcgtatcatttcataacgtgttatatgtattttttaaatacgtttgacttggaggttgtgggttcgatttttaaaaaaaaatccaactgaatatgtattgtttacacgacaaaagcatatgatgtatataaatgcgggctatatcacacactcaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATCTACTATATTAATGACAACGATGAATTGAACATGTTTAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCTCTTTA-CTAACAgcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaactttatctactatattaatgacaacgatgaattgaacatgtttaagttataatgaataaaaatatgctctgttctgctctttactaaca
gi|4 : aaaaagtaaataatggaagacatcatggattcaagtattcggggttaatatgtgctcgtttaaacatacccggagatacaaaatgcagctgagcactaaaaagggaatttttatcagataaacaatcatgtgttttttctttttatattataatatatatgaaagtgagctgtttacgcgtgcaaatatgttattacgtgaatgacaaatcagtgagaaggtacacattatgattatagtaatttcgacagatttacaaaaaaatgaacaacagacaaatcttaaatgataaaatagttggcgtatataatacagatgcgtggcatagtggtgtgtagagttgacacttttacttatacgactacatctgttttgggttaagttttccttcttttccttttcattcgtatcatttcataacgtgttatatgtattttttaaatacgtttgacttggaggttgtgggttcgatttttaaaaaaaaatccaactgaatatgtattgtttacacgacaaaagcatatgatgtatataaatgcgggctatatcacacactcaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctggcgtttataagttgaaaacatgaagagaaatacagctcgaccaaattgcactggaaagtcattgttgtcatcatttcattgttgttctttttccatcagttaccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgtaattcactttcttgtttcatcaccaaaataccctattcaacatcatattacttacaattaaagtacgcttgtttgtaaattagtatttaaccaatgttaaattttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacgaccatctctaatttggcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaacttTGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCTGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATATGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTAAGCGTGCAAATATGTTATAACGTGAATTTTAAAATCATTGAGAAGTTACACAT-TATAATTATAGTAATTTCGACAGATTC--AC-AAAAA-GTTGA--------------------------ACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATTGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTGC-TTTTTCATTCATATCTTTTCATAACGTGTTATATATA-----TAT-----------TTTTTAAATAAGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAACTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAAAGCGGGCTATATCACACACCCAGAA
gi|4 : aATACGTAAAACTCTGTCATTT-TAAGTTGAAAACATGAAGAGAAATATAACTCGACAAAATTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTAACCGTTAGTTGAAATGTAACTTGCGGTGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TATTTACAATTAAA-GTACGATTGTTTTTAAATTAGTATTTAACCAAAGTTAAATTTTAGTCACTGTCGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG---------------------TAGTTACATGCTACACAA------------CCATCTCTAATTTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaaactctgtcattttaagttgaaaacatgaagagaaatataactcgacaaaattgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagtaaccgttagttgaaatgtaacttgcggtgatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgcaattcactttcttgtttcactaccaaaaataccctattcaacatcatattatttacaattaaagtacgattgtttttaaattagtatttaaccaaagttaaattttagtcactgtcgaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgg
gi|5 : atgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacctggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatatgtttttctttttatattataatcactgaaagtgagctatttaagcgtgcaaatatgttataacgtgaattttaaaatcattgagaagttacacattataattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatcttaaatgataaaatagttggtgtatataataccgatgcgtggcattgtggtgtgtagagttgacacttttacttatacgactacatctattttgggttgagttttccttctttgctttttcattcatatcttttcataacgtgttatatatatattttttaaataagtttgacttggaggttgtgggttcgatttttaaaaagaatccaactgaatatgtattgtttacacgacaaaagcatatgctgtatataaaagcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGCGCAAAA--AAGTAA--ATA-ATGGAAAACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTCCGGTTAAACAT-A-CCTGGAGATACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATCAGATAAACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGACAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGGCAGATTC--AC-AAAGA-GTTGA--------------------------ACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATATTGGTGTATAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAA-----------ATTTAAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTTTTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAAg
gi|5 : ATACGTATAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGC--GACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTGTTTCC----------GTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCTTAGTTGGAACACTTATCAGATTCAAGTTGCCATGCACGTAATAAATAGCATATCAAA----ATACATTTTGTCACGCAATTCACTTTCTTCTTTCACTTCCAAAAATATCCTATTCAACATCATAT-------------------TATTTACAATTAAA-GTACTCTTGTTTGAAAATTAGTATTTAACGAAAGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------AGTATACACTTTAAATA-----TGAATTAG-TACGGAAAGATA-----AACTAGTTACATGCTACACAA------------CCATCTCTAATATGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatacgtatagctctgtcatttataagttgaaaacatgaagagaaatacagcgaccaaattgcactggaaagtcattgttgtcatcattttattgttgttctgtttccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcttagttggaacacttatcagattcaagttgccatgcacgtaataaatagcatatcaaaatacattttgtcacgcaattcactttcttctttcacttccaaaaatatcctattcaacatcatattatttacaattaaagtactcttgtttgaaaattagtatttaacgaaagttaaattttggtcactgtagaaaattgtgaaagtatacactttaaatatgaattagtacggaaagataaactagttacatgctacacaaccatctctaatatg
gi|6 : tgcgcaaaaaagtaaataatggaaaacatcatggattcaagtattcggggttaatatgtgtccggttaaacatacctggagatacaaaatgctgctgagcactgaaaagggaatttatatcagataaacaatcatatgttttctttttatattataatcactgaaagtgagctatttacgcgtgcaaatatgttattacgtgaatgacaaatcattgagaaggtacacattatgattatagtcatttcggcagattcacaaagagttgaacaacagacaaaatcttaaatgataaaatagttggtgtatataataccgatgcgtggcatattggtgtatagagttgacacttttacttatacgactacatctattttgggttgagttttccttcttttccttttcattcgtatcatttcataacgtgttatatataaatttaaaatatgtttgacttggaggttgtgggttcgatttttaaaaagaatccaattgaatatgttttgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntCGCAAAAGAAAGTAA--ATA-ATGGAAGACATCATAGATTCAAGTATTCGGG--GTTATTTTG------------CAT----CTGGAGATAC-AGATGCTGCTGAGCACTGAAAAGGGAATTTATATAAGATACACAATCATGTGTTGT--TTTTTTATATTATAAT-CGC-TAAAT-GTGGGCTTTTAACCCGTGCAAATATGTCATTACGTAAATTGTAA---C----AAAAAGTAAATGTCTAT-ATCATAGT
gi|6 : TAT-GTCATTACG-TAAATTGTAAC-AAAAA-GTAAATGTCTATATCATAGTAAATCCTGTAAACAACAGACAAAATCGTAAATGATAAAATA-----TATGTATAATACCGATGTG-GGCATAGTGGTTTGTAGAGTTGACACTTTTACTCATACGA----ATGTCTATTTTGGGTTGATTTTTCCCTCTTTTTTCTTTTCACTCGTATCACTTCATAACTTGT--TATATAACGTTTATATATATATATATATTTAAATATGTTTGACTTGGAGGTTGTGGATTCGA-ATTT-AAAACAAAT------C----TGATTATGTTATGTTTGCACGACAAAAGCGTATTCTGTATAATATATGaaatcctgtaaacaacagacaaaatcgtaaatgataaaatatatgtataataccgatgtgggcatagtggtttgtagagttgacacttttactcatacgaatgtctattttgggttgatttttccctcttttttcttttcactcgtatcacttcataacttgttatataacgtttatatatatatatatatttaaatatgtttgacttggaggttgtggattcgaatttaaaacaaatctgattatgttatgtttgcacgacaaaagcgtattctgtataatatatgt
gi|7 : cgcaaaagaaagtaaataatggaagacatcatagattcaagtattcggggttattttgcatctggagatacagatgctgctgagcactgaaaagggaatttatataagatacacaatcatgtgttgtttttttatattataatcgctaaatgtgggcttttaacccgtgcaaaTGCACAAAA--AAGTAA--ATA-ATGGAAGACATCATTGATTCAAGTATTCGGG--GTTAATATGTGTCCGGTTAAACAT-A-CGCGGAGATAAAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTT--CTTTTTATATCATAAT-CAC-TGAAA-GTGAGCTATTTACGCATGCAGATATGTTATTACGTGAATGTCAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAA-GCTGA--------------------------ACAACAGACAAAATCTTAAATGATCAAATAGTTGGTGTATATAACACCGATGCGTGGCATAGTGGTGTGTAGAGCTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTCTCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAATTTAAATCCAATTt
gi|8 : aTACGTAAAGCTCTGTCATTTATGAGTTGAAAATATGAAGAGAAATACAGC--GATCAAGTTGCACTGGAAATTCATTGT---CACCATTTT---GTTGTTCTTTT-CTATCAGTTTCTGCCAGTTGAAACGTCACTTGTGAAAATTAGGACTCAAGCAGTGTCAAAGTTGGAACACGAATCAGATTCAGGTTGCCATTCAGGTAATAAAT--TCTATTACACATTATTC-TTTTCTCATGCAAATCACTTTCTTGa
gi|8 : TTTCACTTCCAAAGATATC--ATTTAAAATCATATCTTGGACACTTTTTTCTATTATTCACAATCAA--GTACTATTGTTTGTAAATTAGTATTTAATAAATGATAAATTTTGGTCACTGTAGAAAATT-T-----------------GTAT-----------------TGAA-TAG-T--------TTA-----AA-TAGTAACATGCTACACAA------------CCATCTCTAATTTGacctacatatttccggaataattgactggattatatttttcacttccaaagatatcatttaaaatcatatcttggacacttttttctattattcacaatcaagtactattgtttgtaaattagtatttaataaatgataaattttggtcactgtagaaaatttgtattgaatagtttaaatagtaacatgctacacaaccatctctaatttgg
gi|9 : tacgtaaagctctgtcatttatgagttgaaaatatgaagagaaatacagcgatcaagttgcactggaaattcattgtcaccattttgttgttcttttctatcagtttctgccagttgaaacgtcacttgtgaaaattaggactcaagcagtgtcaaagttggaacacgaatcagattcaggttgccattcaggtaataaattctattacacattattcttttctcatgcaaatcactttcttgacctacatatttccggaataattgactggattatattATACGTAAAGCTCTGTCACTTATAAGTTGAAAACATGAAGAGAAATACAGC--GACCAAATTGCACTGGAATGTCATTGTTGTCATCATTGTATTGTTGTTCTTTTTCCATCAGGTACCGTTAGTTGAAATTTCACCTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTTATAAATAGCATATCACA----ATACATTTTGTCATGCTATTCACTTTCTTCTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TAATTACAATTAAA-GTACTCTTGTTTGTTAATTAGTATTTAACCAAAGTTTATTTTCGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TACTGAAAAATA-----AACTAGTAACATGCTTCACAA------------CCATCTCTAATTTGg
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|18 ): TTTTGTTACAATCACCAGGCCAAACTACAAGGCACTGGCAGAAATCTTGGCTGCCGTTCGATGTCCAGGAGGCTATGGACTAGGCACGGGATATCTATTGG
Alignments
lowQualScore : 111111111111111111111
lowQualScore : 111 1 111111 11 1 66666666666666666666666666 11 3333333333333333333 111111 11 1111 4444444444444444444 2222222222222 11111 000000000000000000000 222222222222 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 333333333333 2222
lowQualScore : 44 222 2 1 33 1 1 2 0 2 2 8 1 999999 1 1 44 3 3 3 3 3 44 3 5 55555555555555555555555555 3 3 55 5 5 77 2222222222222222222 5 666666 6 22 0 0 5 2222 4 4444444444444444444 0 5 1 4444444444444 11111 777777777777777777777 222222222222 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 1 7 99 444444444444 6 1 6 1 3333
lowQualScore : .. ... . . .. . . . . . . . . ...... . . .. . . . . . .. . . .......................... . . .. . . .. ................... . ...... . .. . . . .... . ................... . . . ............. ..... ..................... ............ ........................................................................................ . . . .. ............ . . . . ....
lowQualScore : 22 999 9 0 99 0 0 0 1 0 9 6 4 444444 0 0 66 3 3 3 3 3 66 3 5 44444444444444444444444444 2 2 77 7 0 99 1111111111111111111 7 444444 7 77 6 4 0 1111 3 3333333333333333333 4 0 0 4444444444444 11111 333333333333333333333 888888888888 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 6 4 3 22 222222222222 7 0 7 2 0000
consensus : TGCGCAAAA--AAGTAA--ATA-ATGGAANACATCATGGATTCAAGTATTCGGG--GTTANTNTGTGTCNGGTTANACAT-A-CCCGGAGACACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATNAGATANACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGGTAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTAAAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAANGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TAC-----GATA-----AA-TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGAATTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGNTCTTTA-CTAACATGTCTGTCTGTCTGCCTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTC
Reference ( family-943 ) : TGCGCAAAA--AAGTAA--ATA-ATGGAANACATCATGGATTCAAGTATTCGGG--GTTANTNTGTGTCNGGTTANACAT-A-CCCGGAGACACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATNAGATANACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGGTAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTAAAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAANGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TAC-----GATA-----AA-TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGAATTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGNTCTTTA-CTAACATGTCTGTCTGTCTGCCTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTC
gi|1 : TGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCCGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACTCATGCAACTATGTTATTACGTGAATGAAAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTC--AC-AAAAA-GTTGA--------------------------ACAACAGACAAAATATTAAATGATGAAATAGTTGTTGTATATAATACCGATGCGTGGCATAGTGGTGTGTATAGTTGACACTTTTACTTATACGACTCTACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-C--------------ATTTCATAACGTGT--TATATA-----T-T-----------TTTTTAAATATGTTTGCCTTGGAGGTTGTGGGTGTGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAA
gi|1 : ATACGTAAAGCTCTGTCATTTATAGGTTGAAAACATGAAGAGAAATACAGCTCGACCAATTTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCATTTGCGGAGATATGGACTGAATCGACATCATAG----AACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATGACA----ATACATTTTGTCACGCAATTCACCTT-TTGTTTCACTACCAAAAATACCCTATTCAGCATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAACGTTAAATTTTCGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG---------------------TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGCATTGAACAAGTTCAAGTTATAATGAAT-AAAATA--TGCTC------------TGT-TCTGATCTTTA-CTAACATGTCTGTCTGT----CTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctgtcatttataggttgaaaacatgaagagaaatacagctcgaccaatttgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagttaccgttagttgaaatgtcatttgcggagatatggactgaatcgacatcatagaacactaatcagattcaagttgccatgcacgtaataaatagtatatgacaatacattttgtcacgcaattcaccttttgtttcactaccaaaaataccctattcagcatcatattacttacaattaaagtactcttgtttgtaaattagtatttaaccaacgttaaattttcgtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtatctactatattaatgacaacgatgcattgaacaagttcaagttataatgaataaaatatgctctgttctgatctttactaacatgtctgtctgtctgtctaacgtgatctgtgggtcaaaattggtgcagggaatttggcagagccttgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|10 : tgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacccggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatgtgtttttctttttatattataatcactgaaagtgagctatttactcatgcaactatgttattacgtgaatgaaaaatcattgagaaggtacacattatgattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatattaaatgatgaaatagttgttgtatataataccgatgcgtggcatagtggtgtgtatagttgacacttttacttatacgactctacatctattttgggttgagttttccttcttttccatttcataacgtgttatatatttttttaaatatgtttgccttggaggttgtgggtgtgatttttaaaaagaatccaattgaatatgtattgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATGCGTGCAAATATGTTATAACGTGAATGGTAAG-TTATTGAGAAGGTACATAT-TATGATTATAGTCCTTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTG--TATAATACCGATGCG-----TAGTGGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|11 : acaTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATATTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATACGTGCAAATATGTTATTACGTGAATGGTAAA-TTATTGAGAAGGTACATAT-TATGATTAAAGTCCTTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAAAAGTTAGTG--TATAATACCGATGCG-----TAGTGGTc
gi|12 : acaGCAAAA--AA-TAATAATA-ATGGAAGTCATCATGGATTCAAGTATTCGGG--GTTATTTTGTGTCAGATTATACAT-A-CCCGGAGACACATA-TGATGCTGA------AAAGGGAAATTCATATAATATACACAGTCATATGTTTT--CTTTTTATATTAAAAA-TAT-TAAAAAGTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAATTGTAAA-TTATTAAGAAGGTACATAT-AATGATTATAGTCATTTCGACAGATTC--ACAAAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTAT-T-ATACCGATGCGTAGc
gi|13 : acatTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAATGGTAAA-TTATTGAGAAGGTACATAT-TATGATTATAGTCCTTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTG--TATAATACCGATGCGTAG
gi|14 : caTACAATTAAAAGTACTCTTGTTTGTAAGTTAGTATTTAACCAAAGTTAAAATTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TACTGAAAGATA-----AACTAGTTACATGCTACACAACATGCTACACAGCCATCTCTAATTTG
gi|14 : CTCCTATATTGATGACAACGATGACTTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCCTTTTA-CTTACATGATTGTCTGCCTGCCTgtacacacgcacacgcacacgcacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctcctatattgatgacaacgatgacttgaacatgttcaagttataatgaataaaaatatgctctgttctgccttttacttacatgattgtctgcctgcct
gi|15 : tacaattaaaagtactcttgtttgtaagttagtatttaaccaaagttaaaatttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtactgaaagataaactagttacatgctacacaacatgctacacagccatctctaatttggtacacacgcacacgcacacgcacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncAA--AAATAATGATA-ATGGAAGACATCATGGATTCAAGTATTCGGG--GTTATTTTGTGTCAGGTTATACAT-A-CCCGGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATTAT-CAC-TAAAA-TTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAATGGTAAA-TTATTGAGAGGATACATAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAATAGACAAAATCTTAAATGATAAAATAGTTGGTGTATAT--TACCGATGCGTAG
gi|16 : gTGTTTGTTAATTAATATTTAACAAAAGATAAATTTTGGTCAATGTAGAAAATTGTGAAACATATCTCTAAAGGTATATACTTTAGATAAAAATTAAATTAAATACT----GATAGTTAAAA-TAGAAACATGATACACAA------------CTGTCTTTAATTTG
gi|17 : tattgtttagaaggtcatatggttcacaTATCTACTATATTAAT---AACGAAGAACTGAACATGTTCAGGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCTCTTTA-CTAACgtattttcgttacaatcaccagaccgaactacaaggtactggcagaaatattggctgccgttcgatgtcaaggaggctatgtactaggcacgggatatctattg
gi|19 : gnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntacttTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACATAA-CCCTGAGACACAAA
gi|2 : acaTGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCCGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACTCATGCAACTATGTTATTACGTGAATGAAAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTC--AC-AAAAA-GTTGA--------------------------ACAACAGACAAAATATTAAATGATGAAATAGTTGTTGTATATAATACCGATGCGTGGCATAGTGGTGTGTATAGTTGACACTTTTACTTATACGACTCTACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-C--------------ATTTCATAACGTGT--TATATA-----T-T-----------TTTTTAAATATGTTTGCCTTGGAGGTTGTGGGTGTGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAA
gi|2 : ATACGTAAAGCTCTGTCATTTATAGGTTGAAAACATGAAGAGAAATACAGCTCGACCAATTTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCATTTGCGGAGATATGGACTGAATCGACATCATAG----AACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATGACA----ATACATTTTGTCACGCAATTCACCTT-TTGTTTCACTACCAAAAATACCCTATTCAGCATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAACGTTAAATTTTCGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG---------------------TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGCATTGAACAAGTTCAAGTTATAATGAAT-AAAATA--TGCTC------------TGT-TCTGATCTTTA-CTAACATGTCTGTCTGT----CTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctgtcatttataggttgaaaacatgaagagaaatacagctcgaccaatttgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagttaccgttagttgaaatgtcatttgcggagatatggactgaatcgacatcatagaacactaatcagattcaagttgccatgcacgtaataaatagtatatgacaatacattttgtcacgcaattcaccttttgtttcactaccaaaaataccctattcagcatcatattacttacaattaaagtactcttgtttgtaaattagtatttaaccaacgttaaattttcgtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtatctactatattaatgacaacgatgcattgaacaagttcaagttataatgaataaaatatgctctgttctgatctttactaacatgtctgtctgtctgtctaacgtgatctgtgggtcaaaattggtgcagggaatttggcagagccttgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|20 : tgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacccggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatgtgtttttctttttatattataatcactgaaagtgagctatttactcatgcaactatgttattacgtgaatgaaaaatcattgagaaggtacacattatgattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatattaaatgatgaaatagttgttgtatataataccgatgcgtggcatagtggtgtgtatagttgacacttttacttatacgactctacatctattttgggttgagttttccttcttttccatttcataacgtgttatatatttttttaaatatgtttgccttggaggttgtgggtgtgatttttaaaaagaatccaattgaatatgtattgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATAATGAATAAACATAAATCCTCATATTCCTTTTTTGTATCTGAATTTTAGCTTACCTACCTGCCTGTCTGCCTGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|21 : A--ATATGTGGAAAACGTCATTGATTCAAGTGCACAGGAAGTTAATAT-TGTCTAG---CACAT-G-C
gi|3 : AAA--AAGTAA--ATA-ATGGAAGACATCATGGATTCAAGTATTCGGG--GTTAATATGTGCTCGTTTAAACAT-A-CCCGGAGATACAAAATGCAGCTGAGCACTAAAAAGGGAATTTTTATCAGATAAACAATCATGTGTTTTTTCTTTTTATATTATAATATATATGAAA-GTGAGCTGTTTACGCGTGCAAATATGTTATTACGTGAATGACAAA-TCAGTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTT--AC-AAAAAA----ATG-----------------------AACAACAGACAAA-TCTTAAATGATAAAATAGTTGGCGTATATAATACAGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTGTTTTGGGTTAAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATG-----TAT-----------TTTTTAAATACGTTTGACTTGGAGGTTGTGGGTTCGATTTTTAAAAAAAAAT------CCAACTGAATATGTATTGTTTACACGACAAAAGCATATGATGTAT-ATAAATGCGGGCTATATCACACACTCAAAAgc
gi|3 : ATACGTAAAGCTCTGGCGTTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTCATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGTAATTCACTTTCTTGTTTCATCACC-AAAATACCCTATTCAACATCATAT-------------------TACTTACAATTAAA-GTACGCTTGTTTGTAAATTAGTATTTAACCAATGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG---------------------TAGTTACATGCTACACGA------------CCATCTCTAATTTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctggcgtttataagttgaaaacatgaagagaaatacagctcgaccaaattgcactggaaagtcattgttgtcatcatttcattgttgttctttttccatcagttaccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgtaattcactttcttgtttcatcaccaaaataccctattcaacatcatattacttacaattaaagtacgcttgtttgtaaattagtatttaaccaatgttaaattttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacgaccatctctaatttggcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaactttatctactatattaatgacaacgatgaattgaacatgtttaagttataatgaataaaaatatgctctgttctgctctttactaaca
gi|3 : aaaaagtaaataatggaagacatcatggattcaagtattcggggttaatatgtgctcgtttaaacatacccggagatacaaaatgcagctgagcactaaaaagggaatttttatcagataaacaatcatgtgttttttctttttatattataatatatatgaaagtgagctgtttacgcgtgcaaatatgttattacgtgaatgacaaatcagtgagaaggtacacattatgattatagtaatttcgacagatttacaaaaaaatgaacaacagacaaatcttaaatgataaaatagttggcgtatataatacagatgcgtggcatagtggtgtgtagagttgacacttttacttatacgactacatctgttttgggttaagttttccttcttttccttttcattcgtatcatttcataacgtgttatatgtattttttaaatacgtttgacttggaggttgtgggttcgatttttaaaaaaaaatccaactgaatatgtattgtttacacgacaaaagcatatgatgtatataaatgcgggctatatcacacactcaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATCTACTATATTAATGACAACGATGAATTGAACATGTTTAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCTCTTTA-CTAACAgcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaactttatctactatattaatgacaacgatgaattgaacatgtttaagttataatgaataaaaatatgctctgttctgctctttactaaca
gi|4 : aaaaagtaaataatggaagacatcatggattcaagtattcggggttaatatgtgctcgtttaaacatacccggagatacaaaatgcagctgagcactaaaaagggaatttttatcagataaacaatcatgtgttttttctttttatattataatatatatgaaagtgagctgtttacgcgtgcaaatatgttattacgtgaatgacaaatcagtgagaaggtacacattatgattatagtaatttcgacagatttacaaaaaaatgaacaacagacaaatcttaaatgataaaatagttggcgtatataatacagatgcgtggcatagtggtgtgtagagttgacacttttacttatacgactacatctgttttgggttaagttttccttcttttccttttcattcgtatcatttcataacgtgttatatgtattttttaaatacgtttgacttggaggttgtgggttcgatttttaaaaaaaaatccaactgaatatgtattgtttacacgacaaaagcatatgatgtatataaatgcgggctatatcacacactcaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctggcgtttataagttgaaaacatgaagagaaatacagctcgaccaaattgcactggaaagtcattgttgtcatcatttcattgttgttctttttccatcagttaccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgtaattcactttcttgtttcatcaccaaaataccctattcaacatcatattacttacaattaaagtacgcttgtttgtaaattagtatttaaccaatgttaaattttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacgaccatctctaatttggcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaacttTGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCTGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATATGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTAAGCGTGCAAATATGTTATAACGTGAATTTTAAAATCATTGAGAAGTTACACAT-TATAATTATAGTAATTTCGACAGATTC--AC-AAAAA-GTTGA--------------------------ACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATTGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTGC-TTTTTCATTCATATCTTTTCATAACGTGTTATATATA-----TAT-----------TTTTTAAATAAGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAACTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAAAGCGGGCTATATCACACACCCAGAA
gi|4 : aATACGTAAAACTCTGTCATTT-TAAGTTGAAAACATGAAGAGAAATATAACTCGACAAAATTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTAACCGTTAGTTGAAATGTAACTTGCGGTGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TATTTACAATTAAA-GTACGATTGTTTTTAAATTAGTATTTAACCAAAGTTAAATTTTAGTCACTGTCGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG---------------------TAGTTACATGCTACACAA------------CCATCTCTAATTTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaaactctgtcattttaagttgaaaacatgaagagaaatataactcgacaaaattgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagtaaccgttagttgaaatgtaacttgcggtgatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgcaattcactttcttgtttcactaccaaaaataccctattcaacatcatattatttacaattaaagtacgattgtttttaaattagtatttaaccaaagttaaattttagtcactgtcgaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgg
gi|5 : atgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacctggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatatgtttttctttttatattataatcactgaaagtgagctatttaagcgtgcaaatatgttataacgtgaattttaaaatcattgagaagttacacattataattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatcttaaatgataaaatagttggtgtatataataccgatgcgtggcattgtggtgtgtagagttgacacttttacttatacgactacatctattttgggttgagttttccttctttgctttttcattcatatcttttcataacgtgttatatatatattttttaaataagtttgacttggaggttgtgggttcgatttttaaaaagaatccaactgaatatgtattgtttacacgacaaaagcatatgctgtatataaaagcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGCGCAAAA--AAGTAA--ATA-ATGGAAAACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTCCGGTTAAACAT-A-CCTGGAGATACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATCAGATAAACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGACAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGGCAGATTC--AC-AAAGA-GTTGA--------------------------ACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATATTGGTGTATAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAA-----------ATTTAAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTTTTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAAg
gi|5 : ATACGTATAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGC--GACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTGTTTCC----------GTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCTTAGTTGGAACACTTATCAGATTCAAGTTGCCATGCACGTAATAAATAGCATATCAAA----ATACATTTTGTCACGCAATTCACTTTCTTCTTTCACTTCCAAAAATATCCTATTCAACATCATAT-------------------TATTTACAATTAAA-GTACTCTTGTTTGAAAATTAGTATTTAACGAAAGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------AGTATACACTTTAAATA-----TGAATTAG-TACGGAAAGATA-----AACTAGTTACATGCTACACAA------------CCATCTCTAATATGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatacgtatagctctgtcatttataagttgaaaacatgaagagaaatacagcgaccaaattgcactggaaagtcattgttgtcatcattttattgttgttctgtttccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcttagttggaacacttatcagattcaagttgccatgcacgtaataaatagcatatcaaaatacattttgtcacgcaattcactttcttctttcacttccaaaaatatcctattcaacatcatattatttacaattaaagtactcttgtttgaaaattagtatttaacgaaagttaaattttggtcactgtagaaaattgtgaaagtatacactttaaatatgaattagtacggaaagataaactagttacatgctacacaaccatctctaatatg
gi|6 : tgcgcaaaaaagtaaataatggaaaacatcatggattcaagtattcggggttaatatgtgtccggttaaacatacctggagatacaaaatgctgctgagcactgaaaagggaatttatatcagataaacaatcatatgttttctttttatattataatcactgaaagtgagctatttacgcgtgcaaatatgttattacgtgaatgacaaatcattgagaaggtacacattatgattatagtcatttcggcagattcacaaagagttgaacaacagacaaaatcttaaatgataaaatagttggtgtatataataccgatgcgtggcatattggtgtatagagttgacacttttacttatacgactacatctattttgggttgagttttccttcttttccttttcattcgtatcatttcataacgtgttatatataaatttaaaatatgtttgacttggaggttgtgggttcgatttttaaaaagaatccaattgaatatgttttgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntCGCAAAAGAAAGTAA--ATA-ATGGAAGACATCATAGATTCAAGTATTCGGG--GTTATTTTG------------CAT----CTGGAGATAC-AGATGCTGCTGAGCACTGAAAAGGGAATTTATATAAGATACACAATCATGTGTTGT--TTTTTTATATTATAAT-CGC-TAAAT-GTGGGCTTTTAACCCGTGCAAATATGTCATTACGTAAATTGTAA---C----AAAAAGTAAATGTCTAT-ATCATAGT
gi|6 : TAT-GTCATTACG-TAAATTGTAAC-AAAAA-GTAAATGTCTATATCATAGTAAATCCTGTAAACAACAGACAAAATCGTAAATGATAAAATA-----TATGTATAATACCGATGTG-GGCATAGTGGTTTGTAGAGTTGACACTTTTACTCATACGA----ATGTCTATTTTGGGTTGATTTTTCCCTCTTTTTTCTTTTCACTCGTATCACTTCATAACTTGT--TATATAACGTTTATATATATATATATATTTAAATATGTTTGACTTGGAGGTTGTGGATTCGA-ATTT-AAAACAAAT------C----TGATTATGTTATGTTTGCACGACAAAAGCGTATTCTGTATAATATATGaaatcctgtaaacaacagacaaaatcgtaaatgataaaatatatgtataataccgatgtgggcatagtggtttgtagagttgacacttttactcatacgaatgtctattttgggttgatttttccctcttttttcttttcactcgtatcacttcataacttgttatataacgtttatatatatatatatatttaaatatgtttgacttggaggttgtggattcgaatttaaaacaaatctgattatgttatgtttgcacgacaaaagcgtattctgtataatatatgt
gi|7 : cgcaaaagaaagtaaataatggaagacatcatagattcaagtattcggggttattttgcatctggagatacagatgctgctgagcactgaaaagggaatttatataagatacacaatcatgtgttgtttttttatattataatcgctaaatgtgggcttttaacccgtgcaaaTGCACAAAA--AAGTAA--ATA-ATGGAAGACATCATTGATTCAAGTATTCGGG--GTTAATATGTGTCCGGTTAAACAT-A-CGCGGAGATAAAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTT--CTTTTTATATCATAAT-CAC-TGAAA-GTGAGCTATTTACGCATGCAGATATGTTATTACGTGAATGTCAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAA-GCTGA--------------------------ACAACAGACAAAATCTTAAATGATCAAATAGTTGGTGTATATAACACCGATGCGTGGCATAGTGGTGTGTAGAGCTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTCTCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAATTTAAATCCAATTt
gi|8 : aTACGTAAAGCTCTGTCATTTATGAGTTGAAAATATGAAGAGAAATACAGC--GATCAAGTTGCACTGGAAATTCATTGT---CACCATTTT---GTTGTTCTTTT-CTATCAGTTTCTGCCAGTTGAAACGTCACTTGTGAAAATTAGGACTCAAGCAGTGTCAAAGTTGGAACACGAATCAGATTCAGGTTGCCATTCAGGTAATAAAT--TCTATTACACATTATTC-TTTTCTCATGCAAATCACTTTCTTGa
gi|8 : TTTCACTTCCAAAGATATC--ATTTAAAATCATATCTTGGACACTTTTTTCTATTATTCACAATCAA--GTACTATTGTTTGTAAATTAGTATTTAATAAATGATAAATTTTGGTCACTGTAGAAAATT-T-----------------GTAT-----------------TGAA-TAG-T--------TTA-----AA-TAGTAACATGCTACACAA------------CCATCTCTAATTTGacctacatatttccggaataattgactggattatatttttcacttccaaagatatcatttaaaatcatatcttggacacttttttctattattcacaatcaagtactattgtttgtaaattagtatttaataaatgataaattttggtcactgtagaaaatttgtattgaatagtttaaatagtaacatgctacacaaccatctctaatttgg
gi|9 : tacgtaaagctctgtcatttatgagttgaaaatatgaagagaaatacagcgatcaagttgcactggaaattcattgtcaccattttgttgttcttttctatcagtttctgccagttgaaacgtcacttgtgaaaattaggactcaagcagtgtcaaagttggaacacgaatcagattcaggttgccattcaggtaataaattctattacacattattcttttctcatgcaaatcactttcttgacctacatatttccggaataattgactggattatattATACGTAAAGCTCTGTCACTTATAAGTTGAAAACATGAAGAGAAATACAGC--GACCAAATTGCACTGGAATGTCATTGTTGTCATCATTGTATTGTTGTTCTTTTTCCATCAGGTACCGTTAGTTGAAATTTCACCTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTTATAAATAGCATATCACA----ATACATTTTGTCATGCTATTCACTTTCTTCTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TAATTACAATTAAA-GTACTCTTGTTTGTTAATTAGTATTTAACCAAAGTTTATTTTCGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TACTGAAAAATA-----AACTAGTAACATGCTTCACAA------------CCATCTCTAATTTGg
blockSeqs : GA TAA T C AA T T A T A A A GCACTA A C TT A A A A C TA A A TGTCTATATCATAGTAAATCCTGTAA T T CT T T TA ACGTTTATATATATATATA A TTAAAT A TC T CATT C CTTGGACACTTTTTTCTAT A A ACATATCTCTAAA AAAAT ATACTGATAGTTAAAA CATGCTACACAG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN T A AA ATATTCCTTTTT A C G A CTGC
blockSeqs : . TGA . C . T T A T . A A GCACTA A C T . . . . . . . A TGTCGATCCGGTAA T T . . T . TAT . . . TC T . C . . A . . TACTGAAAGATAAAC . T A . . . C . T CTGC
blockSeqs : . A . G . T T A T . A A GCACTA A C T . . . . . . . A TGTCGATCCGGTAA T T . . T . TAT . . . TC T . C . . C . . TACGGAAAGATAAAC . A A . . . A . C .
blockSeqs : . A . C . T T A T . . A GCACTG A C . . . . . . . . A TGTCGATCCGGTAA T T . . T . TAA . . . . T . C . . T . . TACTGAAAAATAAAC . T A . . . A .
blockSeqs : . A . G . T T A T . . A GCACTG A C . . . . . . . . A TGTCGATCCGGTAA T T . . T . TAT . . . . T . C . . A . . TTTAAA . . . . . C .
blockSeqs : . A . C . T T A T . . A GCACTG C A . . . . . . . . A TGTCGATCCGGTAA T T . . . . TT . . . . . . . . A . . . .
blockSeqs : . A . T . A A C A . . . . C A . . . . . . . . . TGA T T . T . . . .
blockSeqs : . A . A . A A T C . . . . C A . . . . . . . . . . T T A . . . .
blockSeqs : . A . G . A A C A . . . . C A . . . . . . . . . . . .
blockSeqs : . . . T . A A C A . . . . A C . . . . . . . . . . . .
blockSeqs : . . . A . A A C A . . . . C A . . . . . . . . . . . .
blockSeqs : . . . G . T T C A . .
blockSeqs : . . G . A A . . . .
blockSeqCons : ** TGTCGATCCGGTAA************ ** TAT****************
originalCons : TGCGCAAAA--AAGTAA--ATA-ATGGAANACATCATGGATTCAAGTATTCGGG--GTTANTNTGTGTCNGGTTANACAT-A-CCCGGAGACACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATNAGATANACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGGTAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTAAAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAANGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TAC-----GATA-----AA-TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGAATTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGNTCTTTA-CTAACATGTCTGTCTGTCTGCCTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTC
finalCons : TGCGCAAAA--AAGTAA--ATA-ATGGAANACATCATGGATTCAAGTATTCGGG--GTTANTNTGTGTCNGGTTANACAT-A-CCCGGAGACACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATNAGATANACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGGTAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAAAGTTGATGTCGATCCGGTAA------------ACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATATAT----------------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTAAAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAANGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TAC-----GATA-----AA-TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGAATTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGNTCTTTA-CTAACATGTCTGTCTGTCTGCCTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|18 ): TTTTGTTACAATCACCAGGCCAAACTACAAGGCACTGGCAGAAATCTTGGCTGCCGTTCGATGTCCAGGAGGCTATGGACTAGGCACGGGATATCTATTGG
Alignments
lowQualScore : 111111111111111111111
lowQualScore : 111 1 111111 11 1 66666666666666666666666666 11 3333333333333333333 111111 11 1111 4444444444444444444 2222222222222 11111 000000000000000000000 222222222222 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 333333333333 2222
lowQualScore : 44 222 2 1 33 1 1 2 0 2 2 8 1 999999 1 1 44 3 3 3 3 3 44 3 5 55555555555555555555555555 3 3 55 5 5 77 2222222222222222222 5 666666 6 22 0 0 5 2222 4 4444444444444444444 0 5 1 4444444444444 11111 777777777777777777777 222222222222 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 1 7 99 444444444444 6 1 6 1 3333
lowQualScore : .. ... . . .. . . . . . . . . ...... . . .. . . . . . .. . . .......................... . . .. . . .. ................... . ...... . .. . . . .... . ................... . . . ............. ..... ..................... ............ ........................................................................................ . . . .. ............ . . . . ....
lowQualScore : 22 999 9 0 99 0 0 0 1 0 9 6 4 444444 0 0 66 3 3 3 3 3 66 3 5 44444444444444444444444444 2 2 77 7 0 99 1111111111111111111 7 444444 7 77 6 4 0 1111 3 3333333333333333333 4 0 0 4444444444444 11111 333333333333333333333 888888888888 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 6 4 3 22 222222222222 7 0 7 2 0000
consensus : TGCGCAAAA--AAGTAA--ATA-ATGGAANACATCATGGATTCAAGTATTCGGG--GTTANTNTGTGTCNGGTTANACAT-A-CCCGGAGACACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATNAGATANACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGGTAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTAAAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAANGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TAC-----GATA-----AA-TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGAATTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGNTCTTTA-CTAACATGTCTGTCTGTCTGCCTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTC
Reference ( family-943 ) : TGCGCAAAA--AAGTAA--ATA-ATGGAANACATCATGGATTCAAGTATTCGGG--GTTANTNTGTGTCNGGTTANACAT-A-CCCGGAGACACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATNAGATANACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGGTAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTAAAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAANGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TAC-----GATA-----AA-TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGAATTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGNTCTTTA-CTAACATGTCTGTCTGTCTGCCTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTC
gi|1 : TGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCCGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACTCATGCAACTATGTTATTACGTGAATGAAAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTC--AC-AAAAA-GTTGA--------------------------ACAACAGACAAAATATTAAATGATGAAATAGTTGTTGTATATAATACCGATGCGTGGCATAGTGGTGTGTATAGTTGACACTTTTACTTATACGACTCTACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-C--------------ATTTCATAACGTGT--TATATA-----T-T-----------TTTTTAAATATGTTTGCCTTGGAGGTTGTGGGTGTGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAA
gi|1 : ATACGTAAAGCTCTGTCATTTATAGGTTGAAAACATGAAGAGAAATACAGCTCGACCAATTTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCATTTGCGGAGATATGGACTGAATCGACATCATAG----AACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATGACA----ATACATTTTGTCACGCAATTCACCTT-TTGTTTCACTACCAAAAATACCCTATTCAGCATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAACGTTAAATTTTCGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG---------------------TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGCATTGAACAAGTTCAAGTTATAATGAAT-AAAATA--TGCTC------------TGT-TCTGATCTTTA-CTAACATGTCTGTCTGT----CTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctgtcatttataggttgaaaacatgaagagaaatacagctcgaccaatttgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagttaccgttagttgaaatgtcatttgcggagatatggactgaatcgacatcatagaacactaatcagattcaagttgccatgcacgtaataaatagtatatgacaatacattttgtcacgcaattcaccttttgtttcactaccaaaaataccctattcagcatcatattacttacaattaaagtactcttgtttgtaaattagtatttaaccaacgttaaattttcgtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtatctactatattaatgacaacgatgcattgaacaagttcaagttataatgaataaaatatgctctgttctgatctttactaacatgtctgtctgtctgtctaacgtgatctgtgggtcaaaattggtgcagggaatttggcagagccttgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|10 : tgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacccggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatgtgtttttctttttatattataatcactgaaagtgagctatttactcatgcaactatgttattacgtgaatgaaaaatcattgagaaggtacacattatgattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatattaaatgatgaaatagttgttgtatataataccgatgcgtggcatagtggtgtgtatagttgacacttttacttatacgactctacatctattttgggttgagttttccttcttttccatttcataacgtgttatatatttttttaaatatgtttgccttggaggttgtgggtgtgatttttaaaaagaatccaattgaatatgtattgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATGCGTGCAAATATGTTATAACGTGAATGGTAAG-TTATTGAGAAGGTACATAT-TATGATTATAGTCCTTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTG--TATAATACCGATGCG-----TAGTGGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|11 : acaTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATATTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATACGTGCAAATATGTTATTACGTGAATGGTAAA-TTATTGAGAAGGTACATAT-TATGATTAAAGTCCTTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAAAAGTTAGTG--TATAATACCGATGCG-----TAGTGGTc
gi|12 : acaGCAAAA--AA-TAATAATA-ATGGAAGTCATCATGGATTCAAGTATTCGGG--GTTATTTTGTGTCAGATTATACAT-A-CCCGGAGACACATA-TGATGCTGA------AAAGGGAAATTCATATAATATACACAGTCATATGTTTT--CTTTTTATATTAAAAA-TAT-TAAAAAGTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAATTGTAAA-TTATTAAGAAGGTACATAT-AATGATTATAGTCATTTCGACAGATTC--ACAAAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTAT-T-ATACCGATGCGTAGc
gi|13 : acatTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACAT-AACCCTGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATAAT-CAC-TAAAT-GTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAATGGTAAA-TTATTGAGAAGGTACATAT-TATGATTATAGTCCTTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAACAGACAAAATCTTAAATGATAAAATAGTTGGTG--TATAATACCGATGCGTAG
gi|14 : caTACAATTAAAAGTACTCTTGTTTGTAAGTTAGTATTTAACCAAAGTTAAAATTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TACTGAAAGATA-----AACTAGTTACATGCTACACAACATGCTACACAGCCATCTCTAATTTG
gi|14 : CTCCTATATTGATGACAACGATGACTTGAACATGTTCAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCCTTTTA-CTTACATGATTGTCTGCCTGCCTgtacacacgcacacgcacacgcacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctcctatattgatgacaacgatgacttgaacatgttcaagttataatgaataaaaatatgctctgttctgccttttacttacatgattgtctgcctgcct
gi|15 : tacaattaaaagtactcttgtttgtaagttagtatttaaccaaagttaaaatttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtactgaaagataaactagttacatgctacacaacatgctacacagccatctctaatttggtacacacgcacacgcacacgcacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncAA--AAATAATGATA-ATGGAAGACATCATGGATTCAAGTATTCGGG--GTTATTTTGTGTCAGGTTATACAT-A-CCCGGAGACACAAA-TGCTGCTGA------AAAGGGAAATTCATATAAGATACACAGTCATATGTTTT--CTTTTTATATTATTAT-CAC-TAAAA-TTGAGTTATTTATGCGTGCAAATATGTTATTACGTGAATGGTAAA-TTATTGAGAGGATACATAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAAAGTTGATGTC------------GATCCGGTAAACAATAGACAAAATCTTAAATGATAAAATAGTTGGTGTATAT--TACCGATGCGTAG
gi|16 : gTGTTTGTTAATTAATATTTAACAAAAGATAAATTTTGGTCAATGTAGAAAATTGTGAAACATATCTCTAAAGGTATATACTTTAGATAAAAATTAAATTAAATACT----GATAGTTAAAA-TAGAAACATGATACACAA------------CTGTCTTTAATTTG
gi|17 : tattgtttagaaggtcatatggttcacaTATCTACTATATTAAT---AACGAAGAACTGAACATGTTCAGGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCTCTTTA-CTAACgtattttcgttacaatcaccagaccgaactacaaggtactggcagaaatattggctgccgttcgatgtcaaggaggctatgtactaggcacgggatatctattg
gi|19 : gnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntacttTGCGAAAAA--TAATAA---TA-ATGGAACACATCATGCATTCAAATATTCGGG--GTTATTTTGTGTCAGGTTATACATAA-CCCTGAGACACAAA
gi|2 : acaTGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCCGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACTCATGCAACTATGTTATTACGTGAATGAAAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTC--AC-AAAAA-GTTGA--------------------------ACAACAGACAAAATATTAAATGATGAAATAGTTGTTGTATATAATACCGATGCGTGGCATAGTGGTGTGTATAGTTGACACTTTTACTTATACGACTCTACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-C--------------ATTTCATAACGTGT--TATATA-----T-T-----------TTTTTAAATATGTTTGCCTTGGAGGTTGTGGGTGTGATTTTT-AAAAAGAAT------CCAATTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAA
gi|2 : ATACGTAAAGCTCTGTCATTTATAGGTTGAAAACATGAAGAGAAATACAGCTCGACCAATTTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCATTTGCGGAGATATGGACTGAATCGACATCATAG----AACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATGACA----ATACATTTTGTCACGCAATTCACCTT-TTGTTTCACTACCAAAAATACCCTATTCAGCATCATAT-------------------TACTTACAATTAAA-GTACTCTTGTTTGTAAATTAGTATTTAACCAACGTTAAATTTTCGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG---------------------TAGTTACATGCTACACAA------------CCATCTCTAATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTACTATATTAATGACAACGATGCATTGAACAAGTTCAAGTTATAATGAAT-AAAATA--TGCTC------------TGT-TCTGATCTTTA-CTAACATGTCTGTCTGT----CTGTCTAACGTGATCTGTGGGTCAAAATTGGTGCAGGGAATTTGGCAGAGCCTTGTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctgtcatttataggttgaaaacatgaagagaaatacagctcgaccaatttgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagttaccgttagttgaaatgtcatttgcggagatatggactgaatcgacatcatagaacactaatcagattcaagttgccatgcacgtaataaatagtatatgacaatacattttgtcacgcaattcaccttttgtttcactaccaaaaataccctattcagcatcatattacttacaattaaagtactcttgtttgtaaattagtatttaaccaacgttaaattttcgtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtatctactatattaatgacaacgatgcattgaacaagttcaagttataatgaataaaatatgctctgttctgatctttactaacatgtctgtctgtctgtctaacgtgatctgtgggtcaaaattggtgcagggaatttggcagagccttgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|20 : tgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacccggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatgtgtttttctttttatattataatcactgaaagtgagctatttactcatgcaactatgttattacgtgaatgaaaaatcattgagaaggtacacattatgattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatattaaatgatgaaatagttgttgtatataataccgatgcgtggcatagtggtgtgtatagttgacacttttacttatacgactctacatctattttgggttgagttttccttcttttccatttcataacgtgttatatatttttttaaatatgtttgccttggaggttgtgggtgtgatttttaaaaagaatccaattgaatatgtattgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATAATGAATAAACATAAATCCTCATATTCCTTTTTTGTATCTGAATTTTAGCTTACCTACCTGCCTGTCTGCCTGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttagac
gi|21 : A--ATATGTGGAAAACGTCATTGATTCAAGTGCACAGGAAGTTAATAT-TGTCTAG---CACAT-G-C
gi|3 : AAA--AAGTAA--ATA-ATGGAAGACATCATGGATTCAAGTATTCGGG--GTTAATATGTGCTCGTTTAAACAT-A-CCCGGAGATACAAAATGCAGCTGAGCACTAAAAAGGGAATTTTTATCAGATAAACAATCATGTGTTTTTTCTTTTTATATTATAATATATATGAAA-GTGAGCTGTTTACGCGTGCAAATATGTTATTACGTGAATGACAAA-TCAGTGAGAAGGTACACAT-TATGATTATAGTAATTTCGACAGATTT--AC-AAAAAA----ATG-----------------------AACAACAGACAAA-TCTTAAATGATAAAATAGTTGGCGTATATAATACAGATGCGTGGCATAGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTGTTTTGGGTTAAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATG-----TAT-----------TTTTTAAATACGTTTGACTTGGAGGTTGTGGGTTCGATTTTTAAAAAAAAAT------CCAACTGAATATGTATTGTTTACACGACAAAAGCATATGATGTAT-ATAAATGCGGGCTATATCACACACTCAAAAgc
gi|3 : ATACGTAAAGCTCTGGCGTTTATAAGTTGAAAACATGAAGAGAAATACAGCTCGACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTCATTGTTGTTCTTTTTCCATCAGTTACCGTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGTAATTCACTTTCTTGTTTCATCACC-AAAATACCCTATTCAACATCATAT-------------------TACTTACAATTAAA-GTACGCTTGTTTGTAAATTAGTATTTAACCAATGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG---------------------TAGTTACATGCTACACGA------------CCATCTCTAATTTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctggcgtttataagttgaaaacatgaagagaaatacagctcgaccaaattgcactggaaagtcattgttgtcatcatttcattgttgttctttttccatcagttaccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgtaattcactttcttgtttcatcaccaaaataccctattcaacatcatattacttacaattaaagtacgcttgtttgtaaattagtatttaaccaatgttaaattttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacgaccatctctaatttggcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaactttatctactatattaatgacaacgatgaattgaacatgtttaagttataatgaataaaaatatgctctgttctgctctttactaaca
gi|3 : aaaaagtaaataatggaagacatcatggattcaagtattcggggttaatatgtgctcgtttaaacatacccggagatacaaaatgcagctgagcactaaaaagggaatttttatcagataaacaatcatgtgttttttctttttatattataatatatatgaaagtgagctgtttacgcgtgcaaatatgttattacgtgaatgacaaatcagtgagaaggtacacattatgattatagtaatttcgacagatttacaaaaaaatgaacaacagacaaatcttaaatgataaaatagttggcgtatataatacagatgcgtggcatagtggtgtgtagagttgacacttttacttatacgactacatctgttttgggttaagttttccttcttttccttttcattcgtatcatttcataacgtgttatatgtattttttaaatacgtttgacttggaggttgtgggttcgatttttaaaaaaaaatccaactgaatatgtattgtttacacgacaaaagcatatgatgtatataaatgcgggctatatcacacactcaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATCTACTATATTAATGACAACGATGAATTGAACATGTTTAAGTTATAATGAATAAAAATA--TGCTC------------TGT-TCTGCTCTTTA-CTAACAgcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaactttatctactatattaatgacaacgatgaattgaacatgtttaagttataatgaataaaaatatgctctgttctgctctttactaaca
gi|4 : aaaaagtaaataatggaagacatcatggattcaagtattcggggttaatatgtgctcgtttaaacatacccggagatacaaaatgcagctgagcactaaaaagggaatttttatcagataaacaatcatgtgttttttctttttatattataatatatatgaaagtgagctgtttacgcgtgcaaatatgttattacgtgaatgacaaatcagtgagaaggtacacattatgattatagtaatttcgacagatttacaaaaaaatgaacaacagacaaatcttaaatgataaaatagttggcgtatataatacagatgcgtggcatagtggtgtgtagagttgacacttttacttatacgactacatctgttttgggttaagttttccttcttttccttttcattcgtatcatttcataacgtgttatatgtattttttaaatacgtttgacttggaggttgtgggttcgatttttaaaaaaaaatccaactgaatatgtattgtttacacgacaaaagcatatgatgtatataaatgcgggctatatcacacactcaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaagctctggcgtttataagttgaaaacatgaagagaaatacagctcgaccaaattgcactggaaagtcattgttgtcatcatttcattgttgttctttttccatcagttaccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgtaattcactttcttgtttcatcaccaaaataccctattcaacatcatattacttacaattaaagtacgcttgtttgtaaattagtatttaaccaatgttaaattttggtcactgtagaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacgaccatctctaatttggcacacacacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttctctctctaacttTGCGCAAAA--AAGTAA--ATA-ATGGAATACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTTCGTTTAAACAT-A-CCTGGAGATACAAAATGCTGCTGAGCACTAAAAAGGGAATTTATATCAGATAAACAATCATATGTTTTT-CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTAAGCGTGCAAATATGTTATAACGTGAATTTTAAAATCATTGAGAAGTTACACAT-TATAATTATAGTAATTTCGACAGATTC--AC-AAAAA-GTTGA--------------------------ACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATTGTGGTGTGTAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTGC-TTTTTCATTCATATCTTTTCATAACGTGTTATATATA-----TAT-----------TTTTTAAATAAGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAACTGAATATGTATTGTTTACACGACAAAAGCATATGCTGTAT-ATAAAAGCGGGCTATATCACACACCCAGAA
gi|4 : aATACGTAAAACTCTGTCATTT-TAAGTTGAAAACATGAAGAGAAATATAACTCGACAAAATTGCACTGGAAAGTCATTGTTATCATCATTTTATTGTTGTTCTTTTTCCATCAGTAACCGTTAGTTGAAATGTAACTTGCGGTGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTAATAAATAGTATATCACA----ATACATTTTGTCACGCAATTCACTTTCTTGTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TATTTACAATTAAA-GTACGATTGTTTTTAAATTAGTATTTAACCAAAGTTAAATTTTAGTCACTGTCGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG---------------------TAGTTACATGCTACACAA------------CCATCTCTAATTTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacgtaaaactctgtcattttaagttgaaaacatgaagagaaatataactcgacaaaattgcactggaaagtcattgttatcatcattttattgttgttctttttccatcagtaaccgttagttgaaatgtaacttgcggtgatatggactgaagcgacatcatagttggaacactaatcagattcaagttgccatgcacgtaataaatagtatatcacaatacattttgtcacgcaattcactttcttgtttcactaccaaaaataccctattcaacatcatattatttacaattaaagtacgattgtttttaaattagtatttaaccaaagttaaattttagtcactgtcgaaaattgtgaaggtatacactttaaatatgaattagtagttacatgctacacaaccatctctaatttgg
gi|5 : atgcgcaaaaaagtaaataatggaatacatcatggattcaagtattcggggttaatatgtgttcgtttaaacatacctggagatacaaaatgctgctgagcactaaaaagggaatttatatcagataaacaatcatatgtttttctttttatattataatcactgaaagtgagctatttaagcgtgcaaatatgttataacgtgaattttaaaatcattgagaagttacacattataattatagtaatttcgacagattcacaaaaagttgaacaacagacaaaatcttaaatgataaaatagttggtgtatataataccgatgcgtggcattgtggtgtgtagagttgacacttttacttatacgactacatctattttgggttgagttttccttctttgctttttcattcatatcttttcataacgtgttatatatatattttttaaataagtttgacttggaggttgtgggttcgatttttaaaaagaatccaactgaatatgtattgtttacacgacaaaagcatatgctgtatataaaagcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGCGCAAAA--AAGTAA--ATA-ATGGAAAACATCATGGATTCAAGTATTCGGG--GTTAATATGTGTCCGGTTAAACAT-A-CCTGGAGATACAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATCAGATAAACAATCATATGTTTT--CTTTTTATATTATAAT-CAC-TGAAA-GTGAGCTATTTACGCGTGCAAATATGTTATTACGTGAATGACAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGGCAGATTC--AC-AAAGA-GTTGA--------------------------ACAACAGACAAAATCTTAAATGATAAAATAGTTGGTGTATATAATACCGATGCGTGGCATATTGGTGTATAGAGTTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTTCCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAA-----------ATTTAAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAAT------CCAATTGAATATGTTTTGTTTACACGACAAAAGCATATGCTGTAT-ATAAATGCGGGCTATATCACACACCCAGAAg
gi|5 : ATACGTATAGCTCTGTCATTTATAAGTTGAAAACATGAAGAGAAATACAGC--GACCAAATTGCACTGGAAAGTCATTGTTGTCATCATTTTATTGTTGTTCTGTTTCC----------GTTAGTTGAAATGTCACTTGCGGAGATATGGACTGAAGCGACATCTTAGTTGGAACACTTATCAGATTCAAGTTGCCATGCACGTAATAAATAGCATATCAAA----ATACATTTTGTCACGCAATTCACTTTCTTCTTTCACTTCCAAAAATATCCTATTCAACATCATAT-------------------TATTTACAATTAAA-GTACTCTTGTTTGAAAATTAGTATTTAACGAAAGTTAAATTTTGGTCACTGTAGAAAATTGTGAA-------------AGTATACACTTTAAATA-----TGAATTAG-TACGGAAAGATA-----AACTAGTTACATGCTACACAA------------CCATCTCTAATATGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatacgtatagctctgtcatttataagttgaaaacatgaagagaaatacagcgaccaaattgcactggaaagtcattgttgtcatcattttattgttgttctgtttccgttagttgaaatgtcacttgcggagatatggactgaagcgacatcttagttggaacacttatcagattcaagttgccatgcacgtaataaatagcatatcaaaatacattttgtcacgcaattcactttcttctttcacttccaaaaatatcctattcaacatcatattatttacaattaaagtactcttgtttgaaaattagtatttaacgaaagttaaattttggtcactgtagaaaattgtgaaagtatacactttaaatatgaattagtacggaaagataaactagttacatgctacacaaccatctctaatatg
gi|6 : tgcgcaaaaaagtaaataatggaaaacatcatggattcaagtattcggggttaatatgtgtccggttaaacatacctggagatacaaaatgctgctgagcactgaaaagggaatttatatcagataaacaatcatatgttttctttttatattataatcactgaaagtgagctatttacgcgtgcaaatatgttattacgtgaatgacaaatcattgagaaggtacacattatgattatagtcatttcggcagattcacaaagagttgaacaacagacaaaatcttaaatgataaaatagttggtgtatataataccgatgcgtggcatattggtgtatagagttgacacttttacttatacgactacatctattttgggttgagttttccttcttttccttttcattcgtatcatttcataacgtgttatatataaatttaaaatatgtttgacttggaggttgtgggttcgatttttaaaaagaatccaattgaatatgttttgtttacacgacaaaagcatatgctgtatataaatgcgggctatatcacacacccagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntCGCAAAAGAAAGTAA--ATA-ATGGAAGACATCATAGATTCAAGTATTCGGG--GTTATTTTG------------CAT----CTGGAGATAC-AGATGCTGCTGAGCACTGAAAAGGGAATTTATATAAGATACACAATCATGTGTTGT--TTTTTTATATTATAAT-CGC-TAAAT-GTGGGCTTTTAACCCGTGCAAATATGTCATTACGTAAATTGTAA---C----AAAAAGTAAATGTCTAT-ATCATAGT
gi|6 : TAT-GTCATTACG-TAAATTGTAAC-AAAAA-GTAAATGTCTATATCATAGTAAATCCTGTAAACAACAGACAAAATCGTAAATGATAAAATA-----TATGTATAATACCGATGTG-GGCATAGTGGTTTGTAGAGTTGACACTTTTACTCATACGA----ATGTCTATTTTGGGTTGATTTTTCCCTCTTTTTTCTTTTCACTCGTATCACTTCATAACTTGT--TATATAACGTTTATATATATATATATATTTAAATATGTTTGACTTGGAGGTTGTGGATTCGA-ATTT-AAAACAAAT------C----TGATTATGTTATGTTTGCACGACAAAAGCGTATTCTGTATAATATATGaaatcctgtaaacaacagacaaaatcgtaaatgataaaatatatgtataataccgatgtgggcatagtggtttgtagagttgacacttttactcatacgaatgtctattttgggttgatttttccctcttttttcttttcactcgtatcacttcataacttgttatataacgtttatatatatatatatatttaaatatgtttgacttggaggttgtggattcgaatttaaaacaaatctgattatgttatgtttgcacgacaaaagcgtattctgtataatatatgt
gi|7 : cgcaaaagaaagtaaataatggaagacatcatagattcaagtattcggggttattttgcatctggagatacagatgctgctgagcactgaaaagggaatttatataagatacacaatcatgtgttgtttttttatattataatcgctaaatgtgggcttttaacccgtgcaaaTGCACAAAA--AAGTAA--ATA-ATGGAAGACATCATTGATTCAAGTATTCGGG--GTTAATATGTGTCCGGTTAAACAT-A-CGCGGAGATAAAAAATGCTGCTGAGCACTGAAAAGGGAATTTATATCAGATAAACAATCATGTGTTTT--CTTTTTATATCATAAT-CAC-TGAAA-GTGAGCTATTTACGCATGCAGATATGTTATTACGTGAATGTCAAA-TCATTGAGAAGGTACACAT-TATGATTATAGTCATTTCGACAGATTC--AC-AAAAA-GCTGA--------------------------ACAACAGACAAAATCTTAAATGATCAAATAGTTGGTGTATATAACACCGATGCGTGGCATAGTGGTGTGTAGAGCTGACACTTTTACTTATACGACT--ACATCTATTTTGGGTTGAGTTTCTCTTCTTTTC-CTTTTCATTCGTATCATTTCATAACGTGT--TATATA-----TAT-----------TTTTTAAATATGTTTGACTTGGAGGTTGTGGGTTCGATTTTT-AAAAAGAATTTAAATCCAATTt
gi|8 : aTACGTAAAGCTCTGTCATTTATGAGTTGAAAATATGAAGAGAAATACAGC--GATCAAGTTGCACTGGAAATTCATTGT---CACCATTTT---GTTGTTCTTTT-CTATCAGTTTCTGCCAGTTGAAACGTCACTTGTGAAAATTAGGACTCAAGCAGTGTCAAAGTTGGAACACGAATCAGATTCAGGTTGCCATTCAGGTAATAAAT--TCTATTACACATTATTC-TTTTCTCATGCAAATCACTTTCTTGa
gi|8 : TTTCACTTCCAAAGATATC--ATTTAAAATCATATCTTGGACACTTTTTTCTATTATTCACAATCAA--GTACTATTGTTTGTAAATTAGTATTTAATAAATGATAAATTTTGGTCACTGTAGAAAATT-T-----------------GTAT-----------------TGAA-TAG-T--------TTA-----AA-TAGTAACATGCTACACAA------------CCATCTCTAATTTGacctacatatttccggaataattgactggattatatttttcacttccaaagatatcatttaaaatcatatcttggacacttttttctattattcacaatcaagtactattgtttgtaaattagtatttaataaatgataaattttggtcactgtagaaaatttgtattgaatagtttaaatagtaacatgctacacaaccatctctaatttgg
gi|9 : tacgtaaagctctgtcatttatgagttgaaaatatgaagagaaatacagcgatcaagttgcactggaaattcattgtcaccattttgttgttcttttctatcagtttctgccagttgaaacgtcacttgtgaaaattaggactcaagcagtgtcaaagttggaacacgaatcagattcaggttgccattcaggtaataaattctattacacattattcttttctcatgcaaatcactttcttgacctacatatttccggaataattgactggattatattATACGTAAAGCTCTGTCACTTATAAGTTGAAAACATGAAGAGAAATACAGC--GACCAAATTGCACTGGAATGTCATTGTTGTCATCATTGTATTGTTGTTCTTTTTCCATCAGGTACCGTTAGTTGAAATTTCACCTGCGGAGATATGGACTGAAGCGACATCATAGTTGGAACACTAATCAGATTCAAGTTGCCATGCACGTTATAAATAGCATATCACA----ATACATTTTGTCATGCTATTCACTTTCTTCTTTCACTACCAAAAATACCCTATTCAACATCATAT-------------------TAATTACAATTAAA-GTACTCTTGTTTGTTAATTAGTATTTAACCAAAGTTTATTTTCGGTCACTGTAGAAAATTGTGAA-------------GGTATACACTTTAAATA-----TGAATTAG-TACTGAAAAATA-----AACTAGTAACATGCTTCACAA------------CCATCTCTAATTTGg
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|18 ): TTTTGTTACAATCACCAGGCCAAACTACAAGGCACTGGCAGAAATCTTGGCTGCCGTTCGATGTCCAGGAGGCTATGGACTAGGCACGGGATATCTATTGG