lowQualScore : 1111111 1 77777777777777777777777777777777 1 11 11 2 1 1 111 1 1111111111
lowQualScore : 3 2 0000000 3 6 1 44 66666666666666666666666666666666 3 3 44 55 7 5 33 22 2 2 5 2 6666 0 33 2 2 11 44 6 44 3 0 2 2 555 6 2 555 2 5 2 4 3 7 55 44 3 3 888 9999 44 1 2 2 2222222222 3 1 3
lowQualScore : . . ....... . . . .. ................................ . . .. .. . . .. .. . . . . .... . .. . . .. .. . .. . . . . ... . . ... . . . . . . .. .. . . ... .... .. . . . .......... . . .
lowQualScore : 6 1 8888888 3 0 0 22 00000000000000000000000000000000 1 1 22 44 6 0 99 55 9 9 7 9 1111 1 99 9 9 77 22 0 22 1 9 9 9 000 6 7 000 6 7 9 8 1 0 44 22 1 1 666 6666 22 3 9 9 5555555555 2 5 1
consensus : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCCTAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGNGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT--CC-CACCAAT-CGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTTTA-TTTTTT---TATTT-TTTTT-AAATTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAA--TA-TC-TATACA--TTATGTATTT----T--ATAAGTTTATTCCGATCTA-TACCGA-GAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGCCC-ACTACCT
Reference ( gi|3 ) : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACGGGGCATTCTTTTAGATCTTTGATGGTGTTTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCCTAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAACTTAGTCTGCATAATTGACAACGTTTTAGGTTTTACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT--TC-CACCAAT-CGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTACTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAGTTATCGTTTA-TTTTTT---TATTT-TTTTTAAAATTTAACGTTTATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGAATTATTGTTACGAAAT-AAAAAAA--TA-TC-TATACT--TTATGTATTT----T--ATAAGTTTTTTCCGATCTA-TACCGA-GAT----------GCTTCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCC-ACTACCT
gi|6 : TGAACAGTTTCATCGCAACTAATTACAATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGAAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTTTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGGCTAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTATCTG-GTA-C--AGAACTTAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAAAGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCTGTCTGATTGCTATATTTGCGACCAATATT--TC-TACCAAT-CGAAGGAGACTTCGCTGTTTTTTTT--CTATTTATTCG--AACAAAAACATCTTCG-ACGATCGT-AAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTTTA-TTTATT---TATTT-TTTTT-AAATTTAACGTTAAAGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT--AAAAAA--TA-TC-TATACT--TTATGTATTT----T--ATAAGTTTTTTCCGATCTA-TACCGA-GAT----------GCTTCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCC-ACTACCT
gi|2 : TGAACAGGTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACATTAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTTTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGAACAACATACACATATTCGGCTAACCCTTTCT---------G----------A-----------GCAATGCTGTCACAAGTATCTG-GTA-C--AGAACTTCGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGTGGTCTGATTGCTATATTTGCGACCAATATT--TC-CACCAAT-CGAAGGAGACTTCGCTGTTTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAAACGGAAGTGAGCAATTATCGTTTA-TTTATT---TATTTATTTTTTAAATTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT--AAAAAA--TA-TC-TATACT--TTATGTATTT----T--ATAAGTTTTTTTTTATCTA-TACCGA-GAT----------GCTTCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCC-ACTACCT
gi|4 : TGAACAGTTTCATCGCAGCTAATTACTATCAGTTCTAATAAAAAAAATCAACGTTATACAACAGACAGGCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTTTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCCTAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAAGCAATTTTTGATCAT--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGTTACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT--CC-CACCAAT-CGAAGGAGACTTATAAG-TTTTTTT--CTTTTTATTCG--AACAAAAACATTTTCA-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACTAGAAGTGAGCAATTACCGTTTA-TTTTTTTAATATTT-TTTTT--AATTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACATAAT-AAAAAAA--TA-TC-TATACA--TTATGTATTT----T--ATAAGTTTATTCCGATCTA-TAACGA-GAT----------GCTCCGAAATCGTTACCGAGGATACCGACATCGCA-AAAAGTTAACGAGCCCATTACGGGTCC-ACTACC
gi|5 : TAAACAGTTTCATCGCAACTAATTACTATCAATTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGTTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGTCTAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAAT-AAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-TAT-T-CCAACGCACTTCATCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATGTGTGATCAATATT--CC-CACCAAT-CGAAGGAAACTTCGCTG-TTATTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTTAAAATCC-T-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTTTA-TTTATT---ATTTT-TTTTTTACATTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTATGAAAT--AAAAAA--TA-TC-TATACA--TTATG-AAAT----T--ATAAGTTTATTCCGATCTA-TACCGA-GAT----------GCTCCGAGATCATTACGGAGGATACCGACATCGCACGAAAGTTAACGTGCCCATTACGGGTCC-ACTACCT
gi|7 : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAAAGTTATACAACAGACAGTCATCAGTACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACTGTCACTGTTCTGACGCACAATATACATATAATTGCCTAACCCATTCT---------G----------A-----------GCAATGCTATCATAAATAATTG-GTA-C--AGAGTTAAGTCTGCATAATTGACAATGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAAGCAATTTTTTATCAC--TT-T-T-T-CCAACGCGCTTCGTTGAT----TCTTCATTTGATATTGATACACTGGCTGTGACACGTTACAAGCGGTCTGATTGTTATATTTGTGATCAATATT--CC-CACCAAT-CGAA------------G-TTTTTTT--CTTTTTATTCGTAAACAAAAACATCTTCG-ACAATCGTAAAAATCC-ATT---TTTTTTTTACAACCGGAAGTGAGCAATTATCGTTTA-TTTATT---TATTT-TTTTTTTAATTTAACGTTAATGGCGATAAAATGATATTAAAAGCAATGAAACAAAATAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAA--TA-TC-TATACA--TTATGTATTT----T--ATAAGTTTATTCCGATCTA-ATCCGA-GAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCATGAAAGTTAACGAGCCCATTACAGGTCC-ACTAC
gi|1 : TGAATAGTTTCATCGCAATTTATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAATAGACAATCATCAATACTAT-------CTTA-CCTAGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATTTTTGATGGTGTGTTTTTGCCATAGACAACTCTGTTGGC--ATGTCCACAGCCACTGTTCTGACGCACAACATACACATATTCGCCCAACCCTTTCT---------GATTTTTTTCCA-----------GCAATGCTGTCATAAGTAACTG-GCA-C--AGCGCTAAGTCTGCATAATTGACAACTTTTTAGGTTTGAAAACAAAACTT--AGCTAACAACCAATTTTCGATCACT-TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCAGTCCGATTGCTATATTTGTGATCAATATT--CC-CACCAAT-TGAAGGAGACTTCTTTG-ATTTTTT--CTTTTTATTAG--AACAAAAACATCTTCG-ACGATCGTGAAAATCC-A-T---TTTTGTTTACAACCGGACGTGAGCAATTATCGTTTA-TTTTTT---T-TTT-TTTTT-AAATTTAATGTTGATGACGATAAAATGATATTAAAAGCAATGAAGCAAAACAGGATAAG-GGATTTATTGTTATGAAAT-AAAGAAA--TA-TC-TATACA--TTATGTATTT----T--ATAAGTTTATTCCGATCGA-TAACGA-GAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCAAGAAAGCTAACGAGCAGATAACGGTCCC-ACTACC
gi|8 : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AA-TCTACGTTATACAAAATACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGACTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCCTAACCCTTTCT---------G----------ATTTTTTTCCA-GCAATGCTGTCATAAGTAACTAAGTAACTGAGCGCTAAGTCTGCTTAATTGACAATGTTTTAAGTTTGACAACAAAACTCCGAAA--ACAACCAATTTTCGATCAC--TT-T-TTT-CCAACGCGCTTCGTTGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAACAGTCTGATTGCTATATTTGTGATCAATATA--CC-CACCAAT-CGAAGGAGATTTCGCTG-ATTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTTTA-TTTTTT---T-TTT-TT----AAATTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTAATGTAATGAAAT-AAAAAAA--AA-AC-TATACA--TTATGTATTT----T--ATAAGTTTATTCCAATCTA-TACCGA-GAT----------GCTCCGAAATCTTTACGGAGGATACTGACATCGCATCAACCTTAATG
gi|14 : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAGAA-ATATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCATAGCTTTGTGTTGGCTGCAAAATAGAGCATTCTTTTAGATCTTTGATGGTGTGTTTTT------------TCTGTTGACATATATCCACAGTCACTGTTCTGACGCACACCATACACATATTCGCCTAACCCTTTCTCATTTTTTCC----------A-----------GCAATGCTGTCATAAGTTACTG-GTA-C--AGTGCTTAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACTAATTTTCGATCACT-TT-T-T-T-TCAACGCGCTTCGTCGAT----TCTTAATTTGATATTGATACACTGGCTCTGACACATTACAAGCAGTCTGATTGCTATATTTGTGATCAATATT--TC-TACCAAT-TGAAGGAGACTTCGCTG-ATTTTTT--CTTTTTATTCG--AACAAAAAC--------------------ATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTTTA--TTTAT---TATTT-TCTTTTAAATTTAACGT
gi|9 : TGAACAGTTCAGTCGTAACTAATTACTATTAAATCTAGTAAAA-CA-TCAACGTTAAACAACAGGCATTCATCAATATTAT-------CTTA-CCTAGCCTAGCTTTGTGTTGGTTACAGAACATGTCATTCTATTAAATCTTTTGTGGTGTGCTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGCCACTGTTCTGACGCATAACATACACATTTTCGCCTAACCCTTTCT---------G----------ATTTTTTCCT--GCAATACTGTCATAAGAAACAG-GTT-C--AGGACTGAGTCTGAATAACTAACAACGTTTTAGGTTTGACAACAAAACTTCAAAC--ACAACCAATTGTCGATCAC--TTAT-T-T-CCAACGCGCTTGGTCGATTCAGTCTTCATTTGATATTGATACACTGGCTTTGACACATAACAAGCACTCTGATTGCTATAGTTTTATTAAATTTT--CT-CACCAAT-CGAAGGAGACTTCGCTGATTTTTTT--CTTTTTATTCG--AATAAAAACATCTTCG-ACGATCGTAAACTTCC-A-T---TTTTATTTA------------------TACCGTTTA-CTTTTT---TATTT-TTTTT-CAATTTTACGTAAATGACGATTAAATGATGTCAGAAGCAACGAAATAAAACAGGATATG-GGATTTATTCTTTTGAAAT-AAAAAAA--GAGTCTTATGATGATTATACATTTG---TCAATAACATCTCCCCAATTTACTA-AAA-GAT----------GC
gi|10 : tTAAACAGTTTCGTCACAACTAATTACTATCAGTTCTAATAAAA-GAATCAACATTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGATGCAAAACATACACATATTCGCCTGACCCTTTCT---------GATTTTTCCCCA-----------GCAATGCTGTCATAAGTAACTG-GTA-A--AGCGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAGACTTTGAAC--ACAACCAATTTTCGATCACT-TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGAacaagaacatgcattatattcactaacatgaacttaat
gi|12 : TGAACAGTTTTATCGCAACTAATTACTATCAGTTCTAATAA--------------ATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGTTTTGTGTTG---GCAAAACAGGGCATTCTGTTTGATCTTTGATGGTGTGTTTTTGCCATATGCAACTCTGCTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCCTAACGCTTTCT---------GATTTTTTTCTA-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGTGCTTAGTCTGCATAATTGACAGCGTTTCAGGTTTGACAACAAAACTTCGAAC--AAAACCAATTTTCGATCACTTTT-T-T-T-CCAACGCGCTTTGCTGAT----TTTTTTTTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgagcaattatcgtttactttttttatttttttaaaaatttaacgtttatgataataacaagatattaaaagcaatgaaacaaaacaagatataggatttattgttatgaaataaaaaaatatctatacataggtttattccgttctttaccgagatgctccgaaatcgtcacaaaagtcaacgagcccattacggtcccacta
gi|11 : tCAACGTTATACAACAGACAGTCATCAATACTATGGCCTAGCCTAGCTTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCGCTGTTCTGACGCACAACATACACATATTTGCCTAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAAGCAATTTTCGATCAC--TT-T-T-T-CCAACGCGGTTCGTCGAT----TATTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCAGATTGCTATATTTGTGATCAATATT--CC-CACCAAT-CGAAGGAGACTTCGCTG-TTTTTTtttttcgaataaaaacatcttcgacgatcataatatccatttttgtttacaatcggaagagagcaatcgtcgtttatttttttattaatttatcattaatgacgataaaatgatattaaaagctatgaaacaaaacaggatatttggatttattgttatgaaataaaaaaaaatatctacattatgtattttataagtttattccgatctataccgagatggtctgaaatcgttacggaggataccgacatcgcacgaaagttaacgagcccattacggtcccactac
gi|13 : --ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCCCC--ATACTTTCT---------G----------ATTTTTGTCCCAGCAATACTGTCATAAGTAACTG-GTA-C--AGGGCTAAGTCTGCATAACTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-TTT-CCAACGCGCTTGGTCGAT----TCTTCATTTAATATTGATACACTGGCTCTGACACATTACAAGCAGTTTGATTGCTATATTTGTGATCAATATT--CC-CACCAAT-CGAAGGAGACTTCGCTGATTTTTTTCCCTTTTTATTCG--AACAAAAACATCTTCG-AAGATCGTAAAAATCCAA-C---TTGTGTTTACAACCGAAAATGAGCAATTATCGTT---TTTTTG---TGTTT-TTTTT-AAATTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATT-GGATTTATTGTTATAAAATAAAAAAAA--TA-CT-TATAC-----ATATA-------T--ATA-------------TTA-TACGGAGGAT----------AC--CGACATCG-CACGAAAGTTA----------ACGA----------GCCCATTACGGTCCC-ACTACgtaaaatcaatttttgtttacaaccggaagtgagcaattatcgtttattttttaatttttttttaattcaacgttattgacgaaaaaatgattttaaaagcaaagaaacaaaacaggatatgggatttattgatacgaaataaaaaactatctatacattatgtattttttgtattagtttattccgatctataccgagatgcttcgaaatcgttaagaggataccgacatcgcacgaaagttaacgagcccattacgggtccactacct
gi|15 : TTAGTCTGCATAATTGACAACCTTTTAGGTTTGACAAGAAAACTTCGAAC--ACAACAAATTTTCGATCAT--TT-T-T-TTCCAACGCACTTCGTCGAC----TTTTCATTTGATACTGATACACTGGCTCTGACACATTACAAGCAGTCTGATTGCTTTATTTGTGATCAAAATT--T----------------AGA------TG-TTTT-----CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAA-TCC-A-TATTTTTTGTTTACAACTGGAAGTGAGCAATTATCGTTGT-TTTTTT---TCCTTATTTTTCAAGTTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTATGAAAT-AAAAAAA--TA-TC-TATACA--TTATCTATGT----T--ATCAGTTTATTCCGATCTA-TACCGA-GAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGTCCC-ACTACC
gi|16 : TCTGATTTCTATAATTGTTAT-AATATTATTCTCAACAAT-CAAAAGAGTATTTGCTG-ATATTTT--ATTTCTATTCA--AACAAAAACAGCATCGGACGATGGTGAAAATAC-A-T---TTTTGTTTTCAACTGGAAGTGAGAAAATATTGTTTA-TTTT
gi|12 : aaaaATTTTCGATCACTTTT--TT-T-CCAACGCG-------CTTTGCTG-ATTTTTT--TTTTTTTTTCG--AATAAAAACATCTTCG-ACGATCATAATA-TCC-A-T---TTTTGTTTACAATCGGAAGAGAGCAATCGTCGTTTA-TTTTTT---TATT---------AATTTATCATTAATGACGATAAAATGATATTAAAAGCTATGAAACAAAACAGGATATTTGGATTTATTGTTATGAAAT-AAAAAAAAATA-TC-TACA----TTATGTATTT----T--ATAAGTTTATTCCGATCTA-TACCGA-GAT----------GGTCTGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGTCCC-ACTACc
gi|11 : ttgaacagttttatcgcaactaattactatcagttctaataaatacaacagacagtcatcaatactatcttacctggcctagttttgtgttggcaaaacagggcattctgtttgatctttgatggtgtgtttttgccatatgcaactctgctgacatgtccacagtcactgttctgacgcacaacatacacatattcgcctaacgctttctgatttttttctagcaatgctgtcataagtaactggtacagtgcttagtctgcataattgacagcgtttcaggtttgacaacaaaacttcgaacaaaaccaAAAATCA-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTTTA-TTTTTT---AATTT-TTTTTTAA-TTCAACGTTATTGACGAAAAAATGATTTTAAAAGCAAAGAAACAAAACAGGATATG-GGATTTATTGATACGAAAT-AAAAAAC--TA-TC-TATACA--TTATGTATTTTTTGT--ATTAGTTTATTCCGATCTA-TACCGA-GAT----------GCTTCGAAATCGTTA-AGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCC-ACTACCT
gi|10 : caacgttatacaacagacagtcatcaatactatggcctagcctagcttggcctagctttgtgttggctgcaaaacagggcattcttttagatctttgatggtgtgtttttgccataggcaactctgttgacatgtccacagtcgctgttctgacgcacaacatacacatatttgcctaaccctttctgagcaatgctgtcataagtaactggtacagagctaagtctgcataattgacaacgttttaggtttgacaacaaaacttcgaacacaagcaattttcgatcactttttccaacgcggttcgtcgattattcatttgatattgatacactggctctgacacattacaagcggtcagattgctatatttgtgatcaatattcccaccaatcgaaggagacttcgctgttttttgtGTGAGCAATTATCGTTTACTTTTTT---TATTT-TTTTAAAAATTTAACGTTTATGATAATAACAAGATATTAAAAGCAATGAAACAAAACAAGATATA-GGATTTATTGTTATGAAAT-AAAAAAA--TA-TC-TATAC--------------------ATAGGTTTATTCCGTTCTT-TACCGA-GAT----------GCTCCGAAATCGT--------------------CACAAAAGTCAACGAGCCCATTACGGTCCC-ACTA
gi|17 : taaacagtttcgtcacaactaattactatcagttctaataaaagaatcaacattatacaacagacagtcatcaatactatcttacctggcctagctttgtgttggctgcaaaacagggcattcttttagatctttgatggtgtgtttttgccataggcaactctgttgacatgtccacagtcactgttctgatgcaaaacatacacatattcgcctgaccctttctgatttttccccagcaatgctgtcataagtaactggtaaagcgctaagtctgcataattgacaacgttttaggtttgacaacaagactttgaacacaaccaattttcgatcacttttttccaacgcgcttcgtcgattcttcatttgatattgatacactggctctgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGTTTATTCCGATCTA-TACCGA-GATAGGACGAGTAGCTCCGAAATCGTTACGAAGGATACCGACATCGCACGAAAATTACCGAGCTCATTAC-GGTCCAACTACC
gi|18 : TTACGGAGGATACCGACATCGCACGAAAGCTTACGAGTCCATTACGGTCCC-ACGACCT
Alignments
lowQualScore : 1111111 66666666666666666666666666666666 11 1 1111111111
lowQualScore : 3 1 0000000 3 33 2 99999999999999999999999999999999 2 2 33 1 1 33 11 2 2 5 2 5555 555 0 33 33 2 0 2 2 444 2 2 2 444 22 66 2 33 2 2 44 2 66666 6666 3333333333 2
lowQualScore : . . ....... . .. . ................................ . . .. . . .. .. . . . . .... ... . .. .. . . . . ... . . . ... .. .. . .. . . .. . ..... .... .......... .
lowQualScore : 3 2 0000000 1 99 9 22222222222222222222222222222222 9 9 99 0 4 77 77 7 7 3 7 7777 000 7 99 99 9 2 7 7 777 5 5 5 777 99 33 7 66 7 9 44 9 11111 1111 5555555555 5
consensus : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGNGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-TTT---TA-TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGNCCCACTACCT
Reference ( family-8682 ) : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGNGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-TTT---TA-TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGCCCACTACCT
gi|1 : TGAATAGTTTCATCGCAATTTATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAATAGACAATCATCAATACTAT-------CTTA-CCTAGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATTTTTGATGGTGTGTTTTTGCCATAGACAACTCTGTTGGC--ATGTCCACAGCCACTGTTCTGACGCACAACATACACATATTCGCC-CAACCCTTTCT---------GATTTTTTTCCA-----------GCAATGCTGTCATAAGTAACTG-GCA-C--AGCGCTAAGTCTGCATAATTGACAACTTTTTAGGTTTGAAAACAAAACTT--AGCTAACAACCAATTTTCGATCACT-TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCAGTCCGATTGCTATATTTGTGATCAATATT---CCCACCAATTGAAGGAGACTTCTTTG-ATTTTTT--CTTTTTATTAG--AACAAAAACATCTTCG-ACGATCGTGAAAATCC-A-T---TTTTGTTTACAACCGGACGTGAGCAATTATCGTT-TA-TTT-TTT---T--TT--TT-TTTT-AAA-TTTAATGTTGATGACGATAAAATGATATTAAAAGCAATGAAGCAAAACAGGATAAG-GGATTTATTGTTATGAAAT-AAAGAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCGATAACGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCAAGAAAGCTAACGAGCAGATAACGGTCCCACTACC
gi|10 : TAAACAGTTTCGTCACAACTAATTACTATCAGTTCTAATAAAA-GAATCAACATTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGATGCAAAACATACACATATTCGCC-TGACCCTTTCT---------GATTTTTCCCCA-----------GCAATGCTGTCATAAGTAACTG-GTA-A--AGCGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAGACTTTGAAC--ACAACCAATTTTCGATCACT-TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGA
gi|10 : GTGAGCAATTATCGTT-TACTTT-TTT---TA-TT--TT-TTTA-AAAATTTAACGTTTATGATAATAACAAGATATTAAAAGCAATGAAACAAAACAAGATATA-GGATTTATTGTTATGAAAT-AAAAAAATA-TCTATAC--------------------ATAGGTTTATTCCGTTCTTTACCGAGAT----------GCTCCGAAATCGT--------------------CACAAAAGTCAACGAGCCCATTACGGTCCCACTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgagcaattatcgtttactttttttatttttttaaaaatttaacgtttatgataataacaagatattaaaagcaatgaaacaaaacaagatataggatttattgttatgaaataaaaaaatatctatacataggtttattccgttctttaccgagatgctccgaaatcgtcacaaaagtcaacgagcccattacggtcccacta
gi|11 : taaacagtttcgtcacaactaattactatcagttctaataaaagaatcaacattatacaacagacagtcatcaatactatcttacctggcctagctttgtgttggctgcaaaacagggcattcttttagatctttgatggtgtgtttttgccataggcaactctgttgacatgtccacagtcactgttctgatgcaaaacatacacatattcgcctgaccctttctgatttttccccagcaatgctgtcataagtaactggtaaagcgctaagtctgcataattgacaacgttttaggtttgacaacaagactttgaacacaaccaattttcgatcacttttttccaacgcgcttcgtcgattcttcatttgatattgatacactggctctgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAACGTTATACAACAGACAGTCATCAATACTATGGCCTAGCCTAGCTTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCGCTGTTCTGACGCACAACATACACATATTTGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAAGCAATTTTCGATCAC--TT-T-T-T-CCAACGCGGTTCGTCGAT----TATTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCAGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTG-TTTTTT
gi|11 : AAAATCA-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-TTT---AA-TT--TT-TTTT-TAA-TTCAACGTTATTGACGAAAAAATGATTTTAAAAGCAAAGAAACAAAACAGGATATG-GGATTTATTGATACGAAAT-AAAAAACTA-TCTATAC----ATTATGTATTTTTTGTATTAGTTTATTCCGATCTATACCGAGAT----------GCTTCGAAATCGTTA-AGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCCACTACCTgtaaaatcaatttttgtttacaaccggaagtgagcaattatcgtttattttttaatttttttttaattcaacgttattgacgaaaaaatgattttaaaagcaaagaaacaaaacaggatatgggatttattgatacgaaataaaaaactatctatacattatgtattttttgtattagtttattccgatctataccgagatgcttcgaaatcgttaagaggataccgacatcgcacgaaagttaacgagcccattacgggtccactacct
gi|12 : caacgttatacaacagacagtcatcaatactatggcctagcctagcttggcctagctttgtgttggctgcaaaacagggcattcttttagatctttgatggtgtgtttttgccataggcaactctgttgacatgtccacagtcgctgttctgacgcacaacatacacatatttgcctaaccctttctgagcaatgctgtcataagtaactggtacagagctaagtctgcataattgacaacgttttaggtttgacaacaaaacttcgaacacaagcaattttcgatcactttttccaacgcggttcgtcgattattcatttgatattgatacactggctctgacacattacaagcggtcagattgctatatttgtgatcaatattcccaccaatcgaaggagacttcgctgttttttgtTGAACAGTTTTATCGCAACTAATTACTATCAGTTCTAATAA--------------ATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGTTTTGTGTTG---GCAAAACAGGGCATTCTGTTTGATCTTTGATGGTGTGTTTTTGCCATATGCAACTCTGCTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACGCTTTCT---------GATTTTTTTCTA-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGTGCTTAGTCTGCATAATTGACAGCGTTTCAGGTTTGACAACAAAACTTCGAAC--AAAACCAATTTTCGATCACTTTT-T-T-T-CCAACGCGCTTTGCTGAT----TTTTTTTTT
gi|12 : tCTTTGCTG-ATTTTTT--TTTTTTTTTCG--AATAAAAACATCTTCG-ACGATCATAATA-TCC-A-T---TTTTGTTTACAATCGGAAGAGAGCAATCGTCGTT-TA-TTT-TTT---TA-TT-----------AA-TTTATCATTAATGACGATAAAATGATATTAAAAGCTATGAAACAAAACAGGATATTTGGATTTATTGTTATGAAAT-AAAAAAAAA-TATCTAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATACCGAGAT----------GGTCTGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGTCCCACTACtttttcgaataaaaacatcttcgacgatcataatatccatttttgtttacaatcggaagagagcaatcgtcgtttatttttttattaatttatcattaatgacgataaaatgatattaaaagctatgaaacaaaacaggatatttggatttattgttatgaaataaaaaaaaatatctacattatgtattttataagtttattccgatctataccgagatggtctgaaatcgttacggaggataccgacatcgcacgaaagttaacgagcccattacggtcccactac
gi|13 : ttgaacagttttatcgcaactaattactatcagttctaataaatacaacagacagtcatcaatactatcttacctggcctagttttgtgttggcaaaacagggcattctgtttgatctttgatggtgtgtttttgccatatgcaactctgctgacatgtccacagtcactgttctgacgcacaacatacacatattcgcctaacgctttctgatttttttctagcaatgctgtcataagtaactggtacagtgcttagtctgcataattgacagcgtttcaggtttgacaacaaaacttcgaacaaaaccaattttcgatcactttttttccaacgcg--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCCCCATA---CTTTCT---------G----------ATTTTTGTCCCAGCAATACTGTCATAAGTAACTG-GTA-C--AGGGCTAAGTCTGCATAACTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-TTT-CCAACGCGCTTGGTCGAT----TCTTCATTTAATATTGATACACTGGCTCTGACACATTACAAGCAGTTTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTGATTTTTTTCCCTTTTTATTCG--AACAAAAACATCTTCG-AAGATCGTAAAAATCCAA-C---TTGTGTTTACAACCGAAAATGAGCAATTATCGTT----TTT-TTG---TG-TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATT-GGATTTATTGTTATAAAATAAAAAAAATA-CTTATAC----A-TATATATAT----TATA
gi|13 : TACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGTCCCACTACcggaggataccgacatcgcacgaaagttaacgagcccattacggtcccactac
gi|14 : atgtccacagtcactgttctgacgcacaacatacacatattccccatactttctgatttttgtcccagcaatactgtcataagtaactggtacagggctaagtctgcataactgacaacgttttaggtttgacaacaaaacttcgaacacaaccaattttcgatcacttttttccaacgcgcttggtcgattcttcatttaatattgatacactggctctgacacattacaagcagtttgattgctatatttgtgatcaatattcccaccaatcgaaggagacttcgctgatttttttccctttttattcgaacaaaaacatcttcgaagatcgtaaaaatccaacttgtgtttacaaccgaaaatgagcaattatcgtttttttgtgttttttttaaatttaacgttaatgacgataaaatgatattaaaagcaatgaaacaaaacaggatattggatttattgttataaaataaaaaaaatacttatacatatatatattaTGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAGAA-ATATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCATAGCTTTGTGTTGGCTGCAAAATAGAGCATTCTTTTAGATCTTTGATGGTGTGTTTTT------------TCTGTTGACATATATCCACAGTCACTGTTCTGACGCACACCATACACATATTCGCC-TAACCCTTTCTCATTTTTTCC----------A-----------GCAATGCTGTCATAAGTTACTG-GTA-C--AGTGCTTAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACTAATTTTCGATCACT-TT-T-T-T-TCAACGCGCTTCGTCGAT----TCTTAATTTGATATTGATACACTGGCTCTGACACATTACAAGCAGTCTGATTGCTATATTTGTGATCAATATT---TCTACCAATTGAAGGAGACTTCGCTG-ATTTTTT--CTTTTTATTCG--AACAAAAAC--------------------ATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA--TT-TAT---TA-TT--TTCTTTT-AAA-TTTAACGT
gi|15 : AGTCTGCATAATTGACAACCTTTTAGGTTTGACAAGAAAACTTCGAAC--ACAACAAATTTTCGATCAT--TT-T-T-TTCCAACGCACTTCGTCGAC----TTTTCATTTGATACTGATACACTGGCTCTGACACATTACAAGCAGTCTGATTGCTTTATTTGTGATCAAAATT---T--------------AGA------TG-TTTT-----CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAA-TCC-A-TATTTTTTGTTTACAACTGGAAGTGAGCAATTATCGTTGTT-TTT-TTT---CC-TTA-TT-TTTC-AAG-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTATGAAAT-AAAAAAATA-TCTATAC----ATTATCTATGT----TATCAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGTCCCACTACC
gi|16 : ttTCTGATTTCTATAATTGTTAT-AATATTATTCTCAACAATCAAAAGAGTATTTGCTG-ATATTTT--ATTTCTATTCA--AACAAAAACAGCATCGGACGATGGTGAAAATAC-A-T---TTTTGTTTTCAACTGGAAGTGAGAAAATATTGTT-TA-TTT-T
gi|17 : aaaaAGTTTATTCCGATCTATACCGAGATAGGACGAGTAGCTCCGAAATCGTTACGAAGGATACCGACATCGCACGAAAATTACCGAGCTCATTACGGTCCAACTACCc
gi|18 : TTACGGAGGATACCGACATCGCACGAAAGCTTACGAGTCCATTACGGTCCCACGACCT
gi|2 : TGAACAGGTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACATTAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTTTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGAACAACATACACATATTCGGC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCACAAGTATCTG-GTA-C--AGAACTTCGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGTGGTCTGATTGCTATATTTGCGACCAATATT---TCCACCAATCGAAGGAGACTTCGCTGTTTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAAACGGAAGTGAGCAATTATCGTT-TA-TTT-ATT---TA-TTTATT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT--AAAAAATA-TCTATAC----TTTATGTATTT----TATAAGTTTTTTTTTATCTATACCGAGAT----------GCTTCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCCACTACCT
gi|3 : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACGGGGCATTCTTTTAGATCTTTGATGGTGTTTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAACTTAGTCTGCATAATTGACAACGTTTTAGGTTTTACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---TCCACCAATCGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTACTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAGTTATCGTT-TA-TTT-TTT---TA-TT--TT-TTTTAAAA-TTTAACGTTTATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGAATTATTGTTACGAAAT-AAAAAAATA-TCTATAC----TTTATGTATTT----TATAAGTTTTTTCCGATCTATACCGAGAT----------GCTTCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCCACTACCT
gi|4 : TGAACAGTTTCATCGCAGCTAATTACTATCAGTTCTAATAAAAAAAATCAACGTTATACAACAGACAGGCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTTTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAAGCAATTTTTGATCAT--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGTTACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTATAAG-TTTTTTT--CTTTTTATTCG--AACAAAAACATTTTCA-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACTAGAAGTGAGCAATTACCGTT-TA-TTT-TTTTAATA-TT--TT-TTTT--AA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACATAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATAACGAGAT----------GCTCCGAAATCGTTACCGAGGATACCGACATCGCA-AAAAGTTAACGAGCCCATTACGGGTCCACTACC
gi|5 : TAAACAGTTTCATCGCAACTAATTACTATCAATTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGTTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGTC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAAT-AAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-TAT-T-CCAACGCACTTCATCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATGTGTGATCAATATT---CCCACCAATCGAAGGAAACTTCGCTG-TTATTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTTAAAATCC-T-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTTATTA---TT-TT--TT-TTTT-ACA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTATGAAAT--AAAAAATA-TCTATAC----ATTATG-AAAT----TATAAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAGATCATTACGGAGGATACCGACATCGCACGAAAGTTAACGTGCCCATTACGGGTCCACTACCT
gi|6 : TGAACAGTTTCATCGCAACTAATTACAATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGAAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTTTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGGC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTATCTG-GTA-C--AGAACTTAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAAAGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCTGTCTGATTGCTATATTTGCGACCAATATT---TCTACCAATCGAAGGAGACTTCGCTGTTTTTTTT--CTATTTATTCG--AACAAAAACATCTTCG-ACGATCGT-AAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-ATT---TA-TT--TT-TTTT-AAA-TTTAACGTTAAAGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT--AAAAAATA-TCTATAC----TTTATGTATTT----TATAAGTTTTTTCCGATCTATACCGAGAT----------GCTTCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCCACTACCT
gi|7 : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAAAGTTATACAACAGACAGTCATCAGTACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACTGTCACTGTTCTGACGCACAATATACATATAATTGCC-TAACCCATTCT---------G----------A-----------GCAATGCTATCATAAATAATTG-GTA-C--AGAGTTAAGTCTGCATAATTGACAATGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAAGCAATTTTTTATCAC--TT-T-T-T-CCAACGCGCTTCGTTGAT----TCTTCATTTGATATTGATACACTGGCTGTGACACGTTACAAGCGGTCTGATTGTTATATTTGTGATCAATATT---CCCACCAATCGAA------------G-TTTTTTT--CTTTTTATTCGTAAACAAAAACATCTTCG-ACAATCGTAAAAATCC-ATT---TTTTTTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-ATT---TATTT--TT-TTTT-TAA-TTTAACGTTAATGGCGATAAAATGATATTAAAAGCAATGAAACAAAATAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTAATCCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCATGAAAGTTAACGAGCCCATTACAGGTCCACTAC
gi|8 : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AA-TCTACGTTATACAAAATACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGACTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------ATTTTTTTCCA-GCAATGCTGTCATAAGTAACTAAGTAACTGAGCGCTAAGTCTGCTTAATTGACAATGTTTTAAGTTTGACAACAAAACTCCGAAA--ACAACCAATTTTCGATCAC--TT-T-TTT-CCAACGCGCTTCGTTGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAACAGTCTGATTGCTATATTTGTGATCAATATA---CCCACCAATCGAAGGAGATTTCGCTG-ATTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-T--------TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTAATGTAATGAAAT-AAAAAAAAA-ACTATAC----ATTATGTATTT----TATAAGTTTATTCCAATCTATACCGAGAT----------GCTCCGAAATCTTTACGGAGGATACTGACATCGCATCAACCTTAATG
gi|9 : TGAACAGTTCAGTCGTAACTAATTACTATTAAATCTAGTAAAA-CA-TCAACGTTAAACAACAGGCATTCATCAATATTAT-------CTTA-CCTAGCCTAGCTTTGTGTTGGTTACAGAACATGTCATTCTATTAAATCTTTTGTGGTGTGCTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGCCACTGTTCTGACGCATAACATACACATTTTCGCC-TAACCCTTTCT---------G----------ATTTTTTCCT--GCAATACTGTCATAAGAAACAG-GTT-C--AGGACTGAGTCTGAATAACTAACAACGTTTTAGGTTTGACAACAAAACTTCAAAC--ACAACCAATTGTCGATCAC--TTAT-T-T-CCAACGCGCTTGGTCGATTCAGTCTTCATTTGATATTGATACACTGGCTTTGACACATAACAAGCACTCTGATTGCTATAGTTTTATTAAATTTT---CTCACCAATCGAAGGAGACTTCGCTGATTTTTTT--CTTTTTATTCG--AATAAAAACATCTTCG-ACGATCGTAAACTTCC-A-T---TTTTATTTA------------------TACCGTT-TA-CTT-TTT---TA-TT--TT-TTTT-CAA-TTTTACGTAAATGACGATTAAATGATGTCAGAAGCAACGAAATAAAACAGGATATG-GGATTTATTCTTTTGAAAT-AAAAAAAGAGTCT-TATGATGATTATACATTT----
Alignments
lowQualScore : 1111111 66666666666666666666666666666666 11 1 1111111111
lowQualScore : 3 1 0000000 3 33 2 99999999999999999999999999999999 2 2 33 1 1 33 11 2 2 5 2 5555 555 0 33 33 2 0 2 2 444 2 2 2 444 22 66 2 33 2 2 44 2 66666 6666 3333333333 1
lowQualScore : . . ....... . .. . ................................ . . .. . . .. .. . . . . .... ... . .. .. . . . . ... . . . ... .. .. . .. . . .. . ..... .... .......... .
lowQualScore : 3 2 0000000 1 99 9 22222222222222222222222222222222 9 9 99 0 4 77 77 7 7 3 7 7777 000 7 99 99 9 2 7 7 777 5 5 5 777 99 33 7 66 7 9 44 9 11111 1111 5555555555 0
consensus : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGNGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-TTT---TA-TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGNCCCACTACCT
Reference ( family-8682 ) : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGNGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-TTT---TA-TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGNCCCACTACCT
gi|1 : TGAATAGTTTCATCGCAATTTATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAATAGACAATCATCAATACTAT-------CTTA-CCTAGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATTTTTGATGGTGTGTTTTTGCCATAGACAACTCTGTTGGC--ATGTCCACAGCCACTGTTCTGACGCACAACATACACATATTCGCC-CAACCCTTTCT---------GATTTTTTTCCA-----------GCAATGCTGTCATAAGTAACTG-GCA-C--AGCGCTAAGTCTGCATAATTGACAACTTTTTAGGTTTGAAAACAAAACTT--AGCTAACAACCAATTTTCGATCACT-TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCAGTCCGATTGCTATATTTGTGATCAATATT---CCCACCAATTGAAGGAGACTTCTTTG-ATTTTTT--CTTTTTATTAG--AACAAAAACATCTTCG-ACGATCGTGAAAATCC-A-T---TTTTGTTTACAACCGGACGTGAGCAATTATCGTT-TA-TTT-TTT---T--TT--TT-TTTT-AAA-TTTAATGTTGATGACGATAAAATGATATTAAAAGCAATGAAGCAAAACAGGATAAG-GGATTTATTGTTATGAAAT-AAAGAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCGATAACGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCAAGAAAGCTAACGAGCAGATAACGGTCCCACTACC
gi|10 : TAAACAGTTTCGTCACAACTAATTACTATCAGTTCTAATAAAA-GAATCAACATTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGATGCAAAACATACACATATTCGCC-TGACCCTTTCT---------GATTTTTCCCCA-----------GCAATGCTGTCATAAGTAACTG-GTA-A--AGCGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAGACTTTGAAC--ACAACCAATTTTCGATCACT-TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGA
gi|10 : GTGAGCAATTATCGTT-TACTTT-TTT---TA-TT--TT-TTTA-AAAATTTAACGTTTATGATAATAACAAGATATTAAAAGCAATGAAACAAAACAAGATATA-GGATTTATTGTTATGAAAT-AAAAAAATA-TCTATAC--------------------ATAGGTTTATTCCGTTCTTTACCGAGAT----------GCTCCGAAATCGT--------------------CACAAAAGTCAACGAGCCCATTACGGTCCCACTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgagcaattatcgtttactttttttatttttttaaaaatttaacgtttatgataataacaagatattaaaagcaatgaaacaaaacaagatataggatttattgttatgaaataaaaaaatatctatacataggtttattccgttctttaccgagatgctccgaaatcgtcacaaaagtcaacgagcccattacggtcccacta
gi|11 : taaacagtttcgtcacaactaattactatcagttctaataaaagaatcaacattatacaacagacagtcatcaatactatcttacctggcctagctttgtgttggctgcaaaacagggcattcttttagatctttgatggtgtgtttttgccataggcaactctgttgacatgtccacagtcactgttctgatgcaaaacatacacatattcgcctgaccctttctgatttttccccagcaatgctgtcataagtaactggtaaagcgctaagtctgcataattgacaacgttttaggtttgacaacaagactttgaacacaaccaattttcgatcacttttttccaacgcgcttcgtcgattcttcatttgatattgatacactggctctgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAACGTTATACAACAGACAGTCATCAATACTATGGCCTAGCCTAGCTTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCGCTGTTCTGACGCACAACATACACATATTTGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAAGCAATTTTCGATCAC--TT-T-T-T-CCAACGCGGTTCGTCGAT----TATTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCAGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTG-TTTTTT
gi|11 : AAAATCA-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-TTT---AA-TT--TT-TTTT-TAA-TTCAACGTTATTGACGAAAAAATGATTTTAAAAGCAAAGAAACAAAACAGGATATG-GGATTTATTGATACGAAAT-AAAAAACTA-TCTATAC----ATTATGTATTTTTTGTATTAGTTTATTCCGATCTATACCGAGAT----------GCTTCGAAATCGTTA-AGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCCACTACCTgtaaaatcaatttttgtttacaaccggaagtgagcaattatcgtttattttttaatttttttttaattcaacgttattgacgaaaaaatgattttaaaagcaaagaaacaaaacaggatatgggatttattgatacgaaataaaaaactatctatacattatgtattttttgtattagtttattccgatctataccgagatgcttcgaaatcgttaagaggataccgacatcgcacgaaagttaacgagcccattacgggtccactacct
gi|12 : caacgttatacaacagacagtcatcaatactatggcctagcctagcttggcctagctttgtgttggctgcaaaacagggcattcttttagatctttgatggtgtgtttttgccataggcaactctgttgacatgtccacagtcgctgttctgacgcacaacatacacatatttgcctaaccctttctgagcaatgctgtcataagtaactggtacagagctaagtctgcataattgacaacgttttaggtttgacaacaaaacttcgaacacaagcaattttcgatcactttttccaacgcggttcgtcgattattcatttgatattgatacactggctctgacacattacaagcggtcagattgctatatttgtgatcaatattcccaccaatcgaaggagacttcgctgttttttgtTGAACAGTTTTATCGCAACTAATTACTATCAGTTCTAATAA--------------ATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGTTTTGTGTTG---GCAAAACAGGGCATTCTGTTTGATCTTTGATGGTGTGTTTTTGCCATATGCAACTCTGCTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACGCTTTCT---------GATTTTTTTCTA-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGTGCTTAGTCTGCATAATTGACAGCGTTTCAGGTTTGACAACAAAACTTCGAAC--AAAACCAATTTTCGATCACTTTT-T-T-T-CCAACGCGCTTTGCTGAT----TTTTTTTTT
gi|12 : tCTTTGCTG-ATTTTTT--TTTTTTTTTCG--AATAAAAACATCTTCG-ACGATCATAATA-TCC-A-T---TTTTGTTTACAATCGGAAGAGAGCAATCGTCGTT-TA-TTT-TTT---TA-TT-----------AA-TTTATCATTAATGACGATAAAATGATATTAAAAGCTATGAAACAAAACAGGATATTTGGATTTATTGTTATGAAAT-AAAAAAAAA-TATCTAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATACCGAGAT----------GGTCTGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGTCCCACTACtttttcgaataaaaacatcttcgacgatcataatatccatttttgtttacaatcggaagagagcaatcgtcgtttatttttttattaatttatcattaatgacgataaaatgatattaaaagctatgaaacaaaacaggatatttggatttattgttatgaaataaaaaaaaatatctacattatgtattttataagtttattccgatctataccgagatggtctgaaatcgttacggaggataccgacatcgcacgaaagttaacgagcccattacggtcccactac
gi|13 : ttgaacagttttatcgcaactaattactatcagttctaataaatacaacagacagtcatcaatactatcttacctggcctagttttgtgttggcaaaacagggcattctgtttgatctttgatggtgtgtttttgccatatgcaactctgctgacatgtccacagtcactgttctgacgcacaacatacacatattcgcctaacgctttctgatttttttctagcaatgctgtcataagtaactggtacagtgcttagtctgcataattgacagcgtttcaggtttgacaacaaaacttcgaacaaaaccaattttcgatcactttttttccaacgcg--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCCCCATA---CTTTCT---------G----------ATTTTTGTCCCAGCAATACTGTCATAAGTAACTG-GTA-C--AGGGCTAAGTCTGCATAACTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-TTT-CCAACGCGCTTGGTCGAT----TCTTCATTTAATATTGATACACTGGCTCTGACACATTACAAGCAGTTTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTGATTTTTTTCCCTTTTTATTCG--AACAAAAACATCTTCG-AAGATCGTAAAAATCCAA-C---TTGTGTTTACAACCGAAAATGAGCAATTATCGTT----TTT-TTG---TG-TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATT-GGATTTATTGTTATAAAATAAAAAAAATA-CTTATAC----A-TATATATAT----TATA
gi|13 : TACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGTCCCACTACcggaggataccgacatcgcacgaaagttaacgagcccattacggtcccactac
gi|14 : atgtccacagtcactgttctgacgcacaacatacacatattccccatactttctgatttttgtcccagcaatactgtcataagtaactggtacagggctaagtctgcataactgacaacgttttaggtttgacaacaaaacttcgaacacaaccaattttcgatcacttttttccaacgcgcttggtcgattcttcatttaatattgatacactggctctgacacattacaagcagtttgattgctatatttgtgatcaatattcccaccaatcgaaggagacttcgctgatttttttccctttttattcgaacaaaaacatcttcgaagatcgtaaaaatccaacttgtgtttacaaccgaaaatgagcaattatcgtttttttgtgttttttttaaatttaacgttaatgacgataaaatgatattaaaagcaatgaaacaaaacaggatattggatttattgttataaaataaaaaaaatacttatacatatatatattaTGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAGAA-ATATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCATAGCTTTGTGTTGGCTGCAAAATAGAGCATTCTTTTAGATCTTTGATGGTGTGTTTTT------------TCTGTTGACATATATCCACAGTCACTGTTCTGACGCACACCATACACATATTCGCC-TAACCCTTTCTCATTTTTTCC----------A-----------GCAATGCTGTCATAAGTTACTG-GTA-C--AGTGCTTAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACTAATTTTCGATCACT-TT-T-T-T-TCAACGCGCTTCGTCGAT----TCTTAATTTGATATTGATACACTGGCTCTGACACATTACAAGCAGTCTGATTGCTATATTTGTGATCAATATT---TCTACCAATTGAAGGAGACTTCGCTG-ATTTTTT--CTTTTTATTCG--AACAAAAAC--------------------ATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA--TT-TAT---TA-TT--TTCTTTT-AAA-TTTAACGT
gi|15 : AGTCTGCATAATTGACAACCTTTTAGGTTTGACAAGAAAACTTCGAAC--ACAACAAATTTTCGATCAT--TT-T-T-TTCCAACGCACTTCGTCGAC----TTTTCATTTGATACTGATACACTGGCTCTGACACATTACAAGCAGTCTGATTGCTTTATTTGTGATCAAAATT---T--------------AGA------TG-TTTT-----CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAA-TCC-A-TATTTTTTGTTTACAACTGGAAGTGAGCAATTATCGTTGTT-TTT-TTT---CC-TTA-TT-TTTC-AAG-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTATGAAAT-AAAAAAATA-TCTATAC----ATTATCTATGT----TATCAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGTCCCACTACC
gi|16 : ttTCTGATTTCTATAATTGTTAT-AATATTATTCTCAACAATCAAAAGAGTATTTGCTG-ATATTTT--ATTTCTATTCA--AACAAAAACAGCATCGGACGATGGTGAAAATAC-A-T---TTTTGTTTTCAACTGGAAGTGAGAAAATATTGTT-TA-TTT-T
gi|17 : aaaaAGTTTATTCCGATCTATACCGAGATAGGACGAGTAGCTCCGAAATCGTTACGAAGGATACCGACATCGCACGAAAATTACCGAGCTCATTACGGTCCAACTACCc
gi|18 : TTACGGAGGATACCGACATCGCACGAAAGCTTACGAGTCCATTACGGTCCCACGACCT
gi|2 : TGAACAGGTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACATTAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTTTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGAACAACATACACATATTCGGC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCACAAGTATCTG-GTA-C--AGAACTTCGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGTGGTCTGATTGCTATATTTGCGACCAATATT---TCCACCAATCGAAGGAGACTTCGCTGTTTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAAACGGAAGTGAGCAATTATCGTT-TA-TTT-ATT---TA-TTTATT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT--AAAAAATA-TCTATAC----TTTATGTATTT----TATAAGTTTTTTTTTATCTATACCGAGAT----------GCTTCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCCACTACCT
gi|3 : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACGGGGCATTCTTTTAGATCTTTGATGGTGTTTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAACTTAGTCTGCATAATTGACAACGTTTTAGGTTTTACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---TCCACCAATCGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTACTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAGTTATCGTT-TA-TTT-TTT---TA-TT--TT-TTTTAAAA-TTTAACGTTTATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGAATTATTGTTACGAAAT-AAAAAAATA-TCTATAC----TTTATGTATTT----TATAAGTTTTTTCCGATCTATACCGAGAT----------GCTTCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCCACTACCT
gi|4 : TGAACAGTTTCATCGCAGCTAATTACTATCAGTTCTAATAAAAAAAATCAACGTTATACAACAGACAGGCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTTTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAAGCAATTTTTGATCAT--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGTTACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTATAAG-TTTTTTT--CTTTTTATTCG--AACAAAAACATTTTCA-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACTAGAAGTGAGCAATTACCGTT-TA-TTT-TTTTAATA-TT--TT-TTTT--AA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACATAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATAACGAGAT----------GCTCCGAAATCGTTACCGAGGATACCGACATCGCA-AAAAGTTAACGAGCCCATTACGGGTCCACTACC
gi|5 : TAAACAGTTTCATCGCAACTAATTACTATCAATTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGTTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGTC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAAT-AAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-TAT-T-CCAACGCACTTCATCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATGTGTGATCAATATT---CCCACCAATCGAAGGAAACTTCGCTG-TTATTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTTAAAATCC-T-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTTATTA---TT-TT--TT-TTTT-ACA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTATGAAAT--AAAAAATA-TCTATAC----ATTATG-AAAT----TATAAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAGATCATTACGGAGGATACCGACATCGCACGAAAGTTAACGTGCCCATTACGGGTCCACTACCT
gi|6 : TGAACAGTTTCATCGCAACTAATTACAATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGAAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTTTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGGC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTATCTG-GTA-C--AGAACTTAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAAAGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCTGTCTGATTGCTATATTTGCGACCAATATT---TCTACCAATCGAAGGAGACTTCGCTGTTTTTTTT--CTATTTATTCG--AACAAAAACATCTTCG-ACGATCGT-AAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-ATT---TA-TT--TT-TTTT-AAA-TTTAACGTTAAAGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT--AAAAAATA-TCTATAC----TTTATGTATTT----TATAAGTTTTTTCCGATCTATACCGAGAT----------GCTTCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCCACTACCT
gi|7 : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAAAGTTATACAACAGACAGTCATCAGTACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACTGTCACTGTTCTGACGCACAATATACATATAATTGCC-TAACCCATTCT---------G----------A-----------GCAATGCTATCATAAATAATTG-GTA-C--AGAGTTAAGTCTGCATAATTGACAATGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAAGCAATTTTTTATCAC--TT-T-T-T-CCAACGCGCTTCGTTGAT----TCTTCATTTGATATTGATACACTGGCTGTGACACGTTACAAGCGGTCTGATTGTTATATTTGTGATCAATATT---CCCACCAATCGAA------------G-TTTTTTT--CTTTTTATTCGTAAACAAAAACATCTTCG-ACAATCGTAAAAATCC-ATT---TTTTTTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-ATT---TATTT--TT-TTTT-TAA-TTTAACGTTAATGGCGATAAAATGATATTAAAAGCAATGAAACAAAATAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTAATCCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCATGAAAGTTAACGAGCCCATTACAGGTCCACTAC
gi|8 : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AA-TCTACGTTATACAAAATACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGACTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------ATTTTTTTCCA-GCAATGCTGTCATAAGTAACTAAGTAACTGAGCGCTAAGTCTGCTTAATTGACAATGTTTTAAGTTTGACAACAAAACTCCGAAA--ACAACCAATTTTCGATCAC--TT-T-TTT-CCAACGCGCTTCGTTGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAACAGTCTGATTGCTATATTTGTGATCAATATA---CCCACCAATCGAAGGAGATTTCGCTG-ATTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-T--------TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTAATGTAATGAAAT-AAAAAAAAA-ACTATAC----ATTATGTATTT----TATAAGTTTATTCCAATCTATACCGAGAT----------GCTCCGAAATCTTTACGGAGGATACTGACATCGCATCAACCTTAATG
gi|9 : TGAACAGTTCAGTCGTAACTAATTACTATTAAATCTAGTAAAA-CA-TCAACGTTAAACAACAGGCATTCATCAATATTAT-------CTTA-CCTAGCCTAGCTTTGTGTTGGTTACAGAACATGTCATTCTATTAAATCTTTTGTGGTGTGCTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGCCACTGTTCTGACGCATAACATACACATTTTCGCC-TAACCCTTTCT---------G----------ATTTTTTCCT--GCAATACTGTCATAAGAAACAG-GTT-C--AGGACTGAGTCTGAATAACTAACAACGTTTTAGGTTTGACAACAAAACTTCAAAC--ACAACCAATTGTCGATCAC--TTAT-T-T-CCAACGCGCTTGGTCGATTCAGTCTTCATTTGATATTGATACACTGGCTTTGACACATAACAAGCACTCTGATTGCTATAGTTTTATTAAATTTT---CTCACCAATCGAAGGAGACTTCGCTGATTTTTTT--CTTTTTATTCG--AATAAAAACATCTTCG-ACGATCGTAAACTTCC-A-T---TTTTATTTA------------------TACCGTT-TA-CTT-TTT---TA-TT--TT-TTTT-CAA-TTTTACGTAAATGACGATTAAATGATGTCAGAAGCAACGAAATAAAACAGGATATG-GGATTTATTCTTTTGAAAT-AAAAAAAGAGTCT-TATGATGATTATACATTT----
blockSeqs : A A GGCCTAG G AT A GATTTTTGTCCCA A A TG C A . TT A A T T TCAG ATT A CC TA G A T ATT G C A TAA AT TA C AA A T AA G GATGA TTTG AGGACGAGTA T
blockSeqs : . A . . . . GATTTTTCCCCA . . . A A . T . . T . . . T . . . . . . . . . . A A . A . . A . A . . G
blockSeqs : . A . . . . GATTTTTTTCTA . . . T T . T . . . . . . T . . . . . . . . . . A . . T . . A . A . . T
blockSeqs : . A . . . . GATTTTTTTCCA . . . G A . . . . . . . . A . . . . . . . . . . A . . A . . A . A . . T
blockSeqs : . A . . . . CATTTTTTCCA . . . T T . . . . . . . . . . . . . . . . . . . G . . A . . A . A . . T
blockSeqs : . A . . . . GATTTTTTCCT . . . A T . . . . . . . . . . . . . . . . . . . A . . A . . A . T . . T
blockSeqs : . A . . . . GA . . . A T . . . . . . . . . . . . . . . . . . . C . . A . . A . T . . T
blockSeqs : . A . . . . GA . . . A A . . . . . . . . . . . . . . . . . . . A . . A . . A . A . . G
blockSeqs : . . . . . . GA . . . A A . . . . . . . . . . . . . . . . . . . A . . A . . A . A . . G
blockSeqs : . . . . . . GA . . . A T . . . . . . . . . . . . . . . . . . . A . . T . . A . T . . G
blockSeqs : . . . . . . GA . . . A A . . . . . . . . . . . . . . . . . . . T . . A . . . . A . . G
blockSeqs : . . . . GA . . . C A . . . . . . . . . . . . . . . . . . . A . . C . . . . A . . G
blockSeqs : . . GA . . . G G . . . . . . . . . . . . . . . . . . . A . . . . . . . . . G
blockSeqs : . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . .
blockSeqCons : GA****************************** ** ** A*
originalCons : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGNGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-TTT---TA-TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGNCCCACTACCT
finalCons : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCTGA------------------------------GCAATGCTGTCATAAGTAACTG-GTA-C--AGNGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-TTT---TA-TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGNCCCACTACCT
Alignments
lowQualScore : 1111111 66666666666666666666666666666666 11 1 1111111111
lowQualScore : 3 1 0000000 3 33 2 99999999999999999999999999999999 2 2 33 1 1 33 11 2 2 5 2 5555 555 0 33 33 2 0 2 2 444 2 2 2 444 22 66 2 33 2 2 44 2 66666 6666 3333333333 1
lowQualScore : . . ....... . .. . ................................ . . .. . . .. .. . . . . .... ... . .. .. . . . . ... . . . ... .. .. . .. . . .. . ..... .... .......... .
lowQualScore : 3 2 0000000 1 99 9 22222222222222222222222222222222 9 9 99 0 4 77 77 7 7 3 7 7777 000 7 99 99 9 2 7 7 777 5 5 5 777 99 33 7 66 7 9 44 9 11111 1111 5555555555 0
consensus : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGNGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-TTT---TA-TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGNCCCACTACCT
Reference ( family-8682 ) : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGNGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-TTT---TA-TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGNCCCACTACCT
gi|1 : TGAATAGTTTCATCGCAATTTATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAATAGACAATCATCAATACTAT-------CTTA-CCTAGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATTTTTGATGGTGTGTTTTTGCCATAGACAACTCTGTTGGC--ATGTCCACAGCCACTGTTCTGACGCACAACATACACATATTCGCC-CAACCCTTTCT---------GATTTTTTTCCA-----------GCAATGCTGTCATAAGTAACTG-GCA-C--AGCGCTAAGTCTGCATAATTGACAACTTTTTAGGTTTGAAAACAAAACTT--AGCTAACAACCAATTTTCGATCACT-TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCAGTCCGATTGCTATATTTGTGATCAATATT---CCCACCAATTGAAGGAGACTTCTTTG-ATTTTTT--CTTTTTATTAG--AACAAAAACATCTTCG-ACGATCGTGAAAATCC-A-T---TTTTGTTTACAACCGGACGTGAGCAATTATCGTT-TA-TTT-TTT---T--TT--TT-TTTT-AAA-TTTAATGTTGATGACGATAAAATGATATTAAAAGCAATGAAGCAAAACAGGATAAG-GGATTTATTGTTATGAAAT-AAAGAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCGATAACGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCAAGAAAGCTAACGAGCAGATAACGGTCCCACTACC
gi|10 : TAAACAGTTTCGTCACAACTAATTACTATCAGTTCTAATAAAA-GAATCAACATTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGATGCAAAACATACACATATTCGCC-TGACCCTTTCT---------GATTTTTCCCCA-----------GCAATGCTGTCATAAGTAACTG-GTA-A--AGCGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAGACTTTGAAC--ACAACCAATTTTCGATCACT-TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGA
gi|10 : GTGAGCAATTATCGTT-TACTTT-TTT---TA-TT--TT-TTTA-AAAATTTAACGTTTATGATAATAACAAGATATTAAAAGCAATGAAACAAAACAAGATATA-GGATTTATTGTTATGAAAT-AAAAAAATA-TCTATAC--------------------ATAGGTTTATTCCGTTCTTTACCGAGAT----------GCTCCGAAATCGT--------------------CACAAAAGTCAACGAGCCCATTACGGTCCCACTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgagcaattatcgtttactttttttatttttttaaaaatttaacgtttatgataataacaagatattaaaagcaatgaaacaaaacaagatataggatttattgttatgaaataaaaaaatatctatacataggtttattccgttctttaccgagatgctccgaaatcgtcacaaaagtcaacgagcccattacggtcccacta
gi|11 : taaacagtttcgtcacaactaattactatcagttctaataaaagaatcaacattatacaacagacagtcatcaatactatcttacctggcctagctttgtgttggctgcaaaacagggcattcttttagatctttgatggtgtgtttttgccataggcaactctgttgacatgtccacagtcactgttctgatgcaaaacatacacatattcgcctgaccctttctgatttttccccagcaatgctgtcataagtaactggtaaagcgctaagtctgcataattgacaacgttttaggtttgacaacaagactttgaacacaaccaattttcgatcacttttttccaacgcgcttcgtcgattcttcatttgatattgatacactggctctgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAACGTTATACAACAGACAGTCATCAATACTATGGCCTAGCCTAGCTTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCGCTGTTCTGACGCACAACATACACATATTTGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAAGCAATTTTCGATCAC--TT-T-T-T-CCAACGCGGTTCGTCGAT----TATTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCAGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTG-TTTTTT
gi|11 : AAAATCA-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-TTT---AA-TT--TT-TTTT-TAA-TTCAACGTTATTGACGAAAAAATGATTTTAAAAGCAAAGAAACAAAACAGGATATG-GGATTTATTGATACGAAAT-AAAAAACTA-TCTATAC----ATTATGTATTTTTTGTATTAGTTTATTCCGATCTATACCGAGAT----------GCTTCGAAATCGTTA-AGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCCACTACCTgtaaaatcaatttttgtttacaaccggaagtgagcaattatcgtttattttttaatttttttttaattcaacgttattgacgaaaaaatgattttaaaagcaaagaaacaaaacaggatatgggatttattgatacgaaataaaaaactatctatacattatgtattttttgtattagtttattccgatctataccgagatgcttcgaaatcgttaagaggataccgacatcgcacgaaagttaacgagcccattacgggtccactacct
gi|12 : caacgttatacaacagacagtcatcaatactatggcctagcctagcttggcctagctttgtgttggctgcaaaacagggcattcttttagatctttgatggtgtgtttttgccataggcaactctgttgacatgtccacagtcgctgttctgacgcacaacatacacatatttgcctaaccctttctgagcaatgctgtcataagtaactggtacagagctaagtctgcataattgacaacgttttaggtttgacaacaaaacttcgaacacaagcaattttcgatcactttttccaacgcggttcgtcgattattcatttgatattgatacactggctctgacacattacaagcggtcagattgctatatttgtgatcaatattcccaccaatcgaaggagacttcgctgttttttgtTGAACAGTTTTATCGCAACTAATTACTATCAGTTCTAATAA--------------ATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGTTTTGTGTTG---GCAAAACAGGGCATTCTGTTTGATCTTTGATGGTGTGTTTTTGCCATATGCAACTCTGCTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACGCTTTCT---------GATTTTTTTCTA-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGTGCTTAGTCTGCATAATTGACAGCGTTTCAGGTTTGACAACAAAACTTCGAAC--AAAACCAATTTTCGATCACTTTT-T-T-T-CCAACGCGCTTTGCTGAT----TTTTTTTTT
gi|12 : tCTTTGCTG-ATTTTTT--TTTTTTTTTCG--AATAAAAACATCTTCG-ACGATCATAATA-TCC-A-T---TTTTGTTTACAATCGGAAGAGAGCAATCGTCGTT-TA-TTT-TTT---TA-TT-----------AA-TTTATCATTAATGACGATAAAATGATATTAAAAGCTATGAAACAAAACAGGATATTTGGATTTATTGTTATGAAAT-AAAAAAAAA-TATCTAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATACCGAGAT----------GGTCTGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGTCCCACTACtttttcgaataaaaacatcttcgacgatcataatatccatttttgtttacaatcggaagagagcaatcgtcgtttatttttttattaatttatcattaatgacgataaaatgatattaaaagctatgaaacaaaacaggatatttggatttattgttatgaaataaaaaaaaatatctacattatgtattttataagtttattccgatctataccgagatggtctgaaatcgttacggaggataccgacatcgcacgaaagttaacgagcccattacggtcccactac
gi|13 : ttgaacagttttatcgcaactaattactatcagttctaataaatacaacagacagtcatcaatactatcttacctggcctagttttgtgttggcaaaacagggcattctgtttgatctttgatggtgtgtttttgccatatgcaactctgctgacatgtccacagtcactgttctgacgcacaacatacacatattcgcctaacgctttctgatttttttctagcaatgctgtcataagtaactggtacagtgcttagtctgcataattgacagcgtttcaggtttgacaacaaaacttcgaacaaaaccaattttcgatcactttttttccaacgcg--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCCCCATA---CTTTCT---------G----------ATTTTTGTCCCAGCAATACTGTCATAAGTAACTG-GTA-C--AGGGCTAAGTCTGCATAACTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-TTT-CCAACGCGCTTGGTCGAT----TCTTCATTTAATATTGATACACTGGCTCTGACACATTACAAGCAGTTTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTCGCTGATTTTTTTCCCTTTTTATTCG--AACAAAAACATCTTCG-AAGATCGTAAAAATCCAA-C---TTGTGTTTACAACCGAAAATGAGCAATTATCGTT----TTT-TTG---TG-TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATT-GGATTTATTGTTATAAAATAAAAAAAATA-CTTATAC----A-TATATATAT----TATA
gi|13 : TACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGTCCCACTACcggaggataccgacatcgcacgaaagttaacgagcccattacggtcccactac
gi|14 : atgtccacagtcactgttctgacgcacaacatacacatattccccatactttctgatttttgtcccagcaatactgtcataagtaactggtacagggctaagtctgcataactgacaacgttttaggtttgacaacaaaacttcgaacacaaccaattttcgatcacttttttccaacgcgcttggtcgattcttcatttaatattgatacactggctctgacacattacaagcagtttgattgctatatttgtgatcaatattcccaccaatcgaaggagacttcgctgatttttttccctttttattcgaacaaaaacatcttcgaagatcgtaaaaatccaacttgtgtttacaaccgaaaatgagcaattatcgtttttttgtgttttttttaaatttaacgttaatgacgataaaatgatattaaaagcaatgaaacaaaacaggatattggatttattgttataaaataaaaaaaatacttatacatatatatattaTGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAGAA-ATATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCATAGCTTTGTGTTGGCTGCAAAATAGAGCATTCTTTTAGATCTTTGATGGTGTGTTTTT------------TCTGTTGACATATATCCACAGTCACTGTTCTGACGCACACCATACACATATTCGCC-TAACCCTTTCTCATTTTTTCC----------A-----------GCAATGCTGTCATAAGTTACTG-GTA-C--AGTGCTTAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACTAATTTTCGATCACT-TT-T-T-T-TCAACGCGCTTCGTCGAT----TCTTAATTTGATATTGATACACTGGCTCTGACACATTACAAGCAGTCTGATTGCTATATTTGTGATCAATATT---TCTACCAATTGAAGGAGACTTCGCTG-ATTTTTT--CTTTTTATTCG--AACAAAAAC--------------------ATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA--TT-TAT---TA-TT--TTCTTTT-AAA-TTTAACGT
gi|15 : AGTCTGCATAATTGACAACCTTTTAGGTTTGACAAGAAAACTTCGAAC--ACAACAAATTTTCGATCAT--TT-T-T-TTCCAACGCACTTCGTCGAC----TTTTCATTTGATACTGATACACTGGCTCTGACACATTACAAGCAGTCTGATTGCTTTATTTGTGATCAAAATT---T--------------AGA------TG-TTTT-----CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAA-TCC-A-TATTTTTTGTTTACAACTGGAAGTGAGCAATTATCGTTGTT-TTT-TTT---CC-TTA-TT-TTTC-AAG-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTATGAAAT-AAAAAAATA-TCTATAC----ATTATCTATGT----TATCAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGTCCCACTACC
gi|16 : ttTCTGATTTCTATAATTGTTAT-AATATTATTCTCAACAATCAAAAGAGTATTTGCTG-ATATTTT--ATTTCTATTCA--AACAAAAACAGCATCGGACGATGGTGAAAATAC-A-T---TTTTGTTTTCAACTGGAAGTGAGAAAATATTGTT-TA-TTT-T
gi|17 : aaaaAGTTTATTCCGATCTATACCGAGATAGGACGAGTAGCTCCGAAATCGTTACGAAGGATACCGACATCGCACGAAAATTACCGAGCTCATTACGGTCCAACTACCc
gi|18 : TTACGGAGGATACCGACATCGCACGAAAGCTTACGAGTCCATTACGGTCCCACGACCT
gi|2 : TGAACAGGTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACATTAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTTTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGAACAACATACACATATTCGGC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCACAAGTATCTG-GTA-C--AGAACTTCGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGTGGTCTGATTGCTATATTTGCGACCAATATT---TCCACCAATCGAAGGAGACTTCGCTGTTTTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAAACGGAAGTGAGCAATTATCGTT-TA-TTT-ATT---TA-TTTATT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT--AAAAAATA-TCTATAC----TTTATGTATTT----TATAAGTTTTTTTTTATCTATACCGAGAT----------GCTTCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCCACTACCT
gi|3 : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACGGGGCATTCTTTTAGATCTTTGATGGTGTTTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAACTTAGTCTGCATAATTGACAACGTTTTAGGTTTTACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---TCCACCAATCGAAGGAGACTTCGCTG-TTTTTTT--CTTTTTACTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAGTTATCGTT-TA-TTT-TTT---TA-TT--TT-TTTTAAAA-TTTAACGTTTATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGAATTATTGTTACGAAAT-AAAAAAATA-TCTATAC----TTTATGTATTT----TATAAGTTTTTTCCGATCTATACCGAGAT----------GCTTCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCCACTACCT
gi|4 : TGAACAGTTTCATCGCAGCTAATTACTATCAGTTCTAATAAAAAAAATCAACGTTATACAACAGACAGGCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTTTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAAGCAATTTTTGATCAT--TT-T-T-T-CCAACGCGCTTCGTCGAT----TCTTCATTTGATATTGTTACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATTTGTGATCAATATT---CCCACCAATCGAAGGAGACTTATAAG-TTTTTTT--CTTTTTATTCG--AACAAAAACATTTTCA-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACTAGAAGTGAGCAATTACCGTT-TA-TTT-TTTTAATA-TT--TT-TTTT--AA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACATAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTATAACGAGAT----------GCTCCGAAATCGTTACCGAGGATACCGACATCGCA-AAAAGTTAACGAGCCCATTACGGGTCCACTACC
gi|5 : TAAACAGTTTCATCGCAACTAATTACTATCAATTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGTTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGTC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTAACTG-GTA-C--AGAGCTAAGTCTGCATAATTGACAACGTTTTAGGTTTGACAAT-AAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-TAT-T-CCAACGCACTTCATCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCGGTCTGATTGCTATATGTGTGATCAATATT---CCCACCAATCGAAGGAAACTTCGCTG-TTATTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTTAAAATCC-T-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTTATTA---TT-TT--TT-TTTT-ACA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTATGAAAT--AAAAAATA-TCTATAC----ATTATG-AAAT----TATAAGTTTATTCCGATCTATACCGAGAT----------GCTCCGAGATCATTACGGAGGATACCGACATCGCACGAAAGTTAACGTGCCCATTACGGGTCCACTACCT
gi|6 : TGAACAGTTTCATCGCAACTAATTACAATCAGTTCTAATAAAA-AAATCAACGTTATACAACAGACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGAAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTTTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGGC-TAACCCTTTCT---------G----------A-----------GCAATGCTGTCATAAGTATCTG-GTA-C--AGAACTTAGTCTGCATAATTGACAACGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAACCAATTTTCGATCAC--TT-T-T-T-CCAAAGCGCTTCGTCGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAGCTGTCTGATTGCTATATTTGCGACCAATATT---TCTACCAATCGAAGGAGACTTCGCTGTTTTTTTT--CTATTTATTCG--AACAAAAACATCTTCG-ACGATCGT-AAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-ATT---TA-TT--TT-TTTT-AAA-TTTAACGTTAAAGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTATTGTTACGAAAT--AAAAAATA-TCTATAC----TTTATGTATTT----TATAAGTTTTTTCCGATCTATACCGAGAT----------GCTTCGAAATCGTTACGGAGGATACCGACATCGCACGAAAGTTAACGAGCCCATTACGGGTCCACTACCT
gi|7 : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AAATCAAAGTTATACAACAGACAGTCATCAGTACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGGCTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACTGTCACTGTTCTGACGCACAATATACATATAATTGCC-TAACCCATTCT---------G----------A-----------GCAATGCTATCATAAATAATTG-GTA-C--AGAGTTAAGTCTGCATAATTGACAATGTTTTAGGTTTGACAACAAAACTTCGAAC--ACAAGCAATTTTTTATCAC--TT-T-T-T-CCAACGCGCTTCGTTGAT----TCTTCATTTGATATTGATACACTGGCTGTGACACGTTACAAGCGGTCTGATTGTTATATTTGTGATCAATATT---CCCACCAATCGAA------------G-TTTTTTT--CTTTTTATTCGTAAACAAAAACATCTTCG-ACAATCGTAAAAATCC-ATT---TTTTTTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-ATT---TATTT--TT-TTTT-TAA-TTTAACGTTAATGGCGATAAAATGATATTAAAAGCAATGAAACAAAATAGGATATG-GGATTTATTGTTACGAAAT-AAAAAAATA-TCTATAC----ATTATGTATTT----TATAAGTTTATTCCGATCTAATCCGAGAT----------GCTCCGAAATCGTTACGGAGGATACCGACATCGCATGAAAGTTAACGAGCCCATTACAGGTCCACTAC
gi|8 : TGAACAGTTTCATCGCAACTAATTACTATCAGTTCTAATAAAA-AA-TCTACGTTATACAAAATACAGTCATCAATACTAT-------CTTA-CCTGGCCTAGCTTTGTGTTGACTGCAAAACAGGGCATTCTTTTAGATCTTTGATGGTGTGTTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGTCACTGTTCTGACGCACAACATACACATATTCGCC-TAACCCTTTCT---------G----------ATTTTTTTCCA-GCAATGCTGTCATAAGTAACTAAGTAACTGAGCGCTAAGTCTGCTTAATTGACAATGTTTTAAGTTTGACAACAAAACTCCGAAA--ACAACCAATTTTCGATCAC--TT-T-TTT-CCAACGCGCTTCGTTGAT----TCTTCATTTGATATTGATACACTGGCTCTGACACATTACAAACAGTCTGATTGCTATATTTGTGATCAATATA---CCCACCAATCGAAGGAGATTTCGCTG-ATTTTTT--CTTTTTATTCG--AACAAAAACATCTTCG-ACGATCGTAAAAATCC-A-T---TTTTGTTTACAACCGGAAGTGAGCAATTATCGTT-TA-TTT-T--------TT--TT-TTTT-AAA-TTTAACGTTAATGACGATAAAATGATATTAAAAGCAATGAAACAAAACAGGATATG-GGATTTAATGTAATGAAAT-AAAAAAAAA-ACTATAC----ATTATGTATTT----TATAAGTTTATTCCAATCTATACCGAGAT----------GCTCCGAAATCTTTACGGAGGATACTGACATCGCATCAACCTTAATG
gi|9 : TGAACAGTTCAGTCGTAACTAATTACTATTAAATCTAGTAAAA-CA-TCAACGTTAAACAACAGGCATTCATCAATATTAT-------CTTA-CCTAGCCTAGCTTTGTGTTGGTTACAGAACATGTCATTCTATTAAATCTTTTGTGGTGTGCTTTTGCCATAGGCAACTCTGTTGAC--ATGTCCACAGCCACTGTTCTGACGCATAACATACACATTTTCGCC-TAACCCTTTCT---------G----------ATTTTTTCCT--GCAATACTGTCATAAGAAACAG-GTT-C--AGGACTGAGTCTGAATAACTAACAACGTTTTAGGTTTGACAACAAAACTTCAAAC--ACAACCAATTGTCGATCAC--TTAT-T-T-CCAACGCGCTTGGTCGATTCAGTCTTCATTTGATATTGATACACTGGCTTTGACACATAACAAGCACTCTGATTGCTATAGTTTTATTAAATTTT---CTCACCAATCGAAGGAGACTTCGCTGATTTTTTT--CTTTTTATTCG--AATAAAAACATCTTCG-ACGATCGTAAACTTCC-A-T---TTTTATTTA------------------TACCGTT-TA-CTT-TTT---TA-TT--TT-TTTT-CAA-TTTTACGTAAATGACGATTAAATGATGTCAGAAGCAACGAAATAAAACAGGATATG-GGATTTATTCTTTTGAAAT-AAAAAAAGAGTCT-TATGATGATTATACATTT----