lowQualScore : 111111111111111111111111111111111111 11111111111111 1111111111111111111111 1111111111111111111 11111111111111 111111111111111111111111111
lowQualScore : 11 111 111 222 1 11 222222 1 3333333 11 11 2222 11 1 6666666666666666666666666666 11 2222 111 222222 22 111 333 222 1 1111 222 11 1 1 222 999999999999999999 1 1 1 1 333 11 333333 1 222 1 222222 1 22 1 111 11 22 111 1 111 11 55555555555 11 2 1111 11 111 1 1 222222 111 222222 1 3333333333 1 4444444444 1111 33 11 11 11 22222222 11 111111 111 1 1 1 222222 66666666666 777777777777 11 222 111 22 1 1 11111 11 222 1 444444444444444444444444444444444444 111111 1 77777777777777777777777777 11 22222222222222 44444 6666666666 222 333 2 1 5555555555555555555555 1 33 22 5555555555555555555 1 2222 3333333 1 1 00000000000000 1 44444 1 1 22222 1 222 55 22 1 1 55555 11 666666666666666666666666666 1 1 22 1 222 1 22 1 1 1 4 1 333333333 1
lowQualScore : 11 0 000 0 1 777 99999 111 9 0 55 22 8 11 4 999999 44 0 0 1 3 9 44 3 7777777 11 1 2 0 8 1 11 1 1111 88 0 0 8888 3 3 4444444444444444444444444444 0 4 0 4 44 0 4 4 1 0 6 11 3 3 7 4 1 4444 333 444444 11 9 8 777 555 4 0 2 4 6 6 1 8 3 1 333 3 8888 1 333 1 88 5 4 7 7 6 6 2 66 3 1 111 111111111111111111 666 4 4 0 0 0 6 444 2 55 4 88 6 88 666666 4 2 0 111 1 999999 4 0 55 3 6 6 2 2 6 5 6 888 0 777 00 0 44 777 2 8 55555 888 77 6 88 55555555555 88 0 6666 1 0 22 8 55 2 55 8888 999 1 9 2 9 0 999999 777 9 4 55 888888 2 888 1 0 0 0000000000 0 7 22 6666666666 0 4444 44 2 3 0 6 8 33 3 33 3 22 99999999 99 777777 777 2 0 4 0 4 0 7 6 0 9 0 6 333333 3 11 55 1 33333333333 6 5 666666666666 2 6 33 111 111 4 00 2 0 6 6666 6 7 6 7 77777 3 77 7 0 9 4 00 0 4 9 0 3 333 6 6 0 4 4 6 2 6 3 6 8 0 6 0 4 3 0 8 555555555555555555555555555555555555 777777 5 0 0 55 6 3 4 55 4 3 2 44444444444444444444444444 88 3 55 00000000000000 3 4 66 3 00000 0000000000 2 3 4 111 3 555 0 1 4 3 3 888 1111111111111111111111 0 9 5 6 00 33 6 9999999999999999999 5 6 4444 6 6 6 8888888 6 5 5 66666666666666 6 5 6 6 44444 6 6 7 6 5 44444 5 555 6 6 6 6 55 6 33 5 6 5 4 2 00000 88 2 2 2 000000000000000000000000000 5 7 11 6 6 6 5 777 5 6 6 6 11 6 6 5 7 7 0 6 5 444444444 7
lowQualScore : .. . ... . . ... ..... ... . . .. .. . .. . ...... .. . . . . . .. . ....... .. . . . . . .. . .... .. . . .... . . ............................ . . . . .. . . . . . . .. . . . . . .... ... ...... .. . . ... ... . . . . . . . . . . ... . .... . ... . .. . . . . . . . .. . . ... .................. ... . . . . . . ... . .. . .. . .. ...... . . . ... . ...... . . .. . . . . . . . . ... . ... .. . .. ... . . ..... ... .. . .. ........... .. . .... . . .. . .. . .. .... ... . . . . . ...... ... . . .. ...... . ... . . . .......... . . .. .......... . .... .. . . . . . .. . .. . .. ........ .. ...... ... . . . . . . . . . . . . ...... . .. .. . ........... . . ............ . . .. ... ... . .. . . . .... . . . . ..... . .. . . . . .. . . . . . ... . . . . . . . . . . . . . . . . . . .................................... ...... . . . .. . . . .. . . . .......................... .. . .. .............. . . .. . ..... .......... . . . ... . ... . . . . . ... ...................... . . . . .. .. . ................... . . .... . . . ....... . . . .............. . . . . ..... . . . . . ..... . ... . . . . .. . .. . . . . . ..... .. . . . ........................... . . .. . . . . ... . . . . .. . . . . . . . . ......... .
lowQualScore : 00 8 000 7 7 555 22222 555 2 0 55 55 8 22 0 222222 55 2 0 2 2 2 55 2 2222222 00 4 2 8 0 4 00 2 2222 00 8 8 7777 7 3 0000000000000000000000000000 7 0 7 7 33 7 0 0 0 7 7 33 7 7 3 0 0 3333 888 000000 88 2 2 555 000 2 2 0 2 0 0 4 0 2 0 333 3 7777 0 333 0 33 0 0 3 3 7 7 5 55 0 5 555 555555555555555555 555 0 0 5 5 5 0 000 5 55 0 55 0 55 000000 0 5 5 000 5 555555 0 5 55 0 0 0 5 5 0 0 0 777 7 777 00 7 00 000 0 3 00000 777 77 7 77 00000000000 33 3 7777 0 7 00 3 55 5 00 5555 555 2 8 5 2 5 555555 555 8 0 88 000000 0 888 2 0 2 0000000000 0 0 88 5555555555 2 0000 22 5 2 2 5 8 88 0 55 5 22 00000000 00 888888 222 0 2 0 2 0 0 0 0 0 2 5 0 888888 8 44 44 0 66666666666 6 4 555555555555 0 0 88 888 000 0 00 0 2 5 2222 0 0 5 3 77777 7 33 7 7 0 7 33 7 7 7 7 7 333 7 0 7 7 7 7 0 0 7 0 3 7 7 7 0 7 7 3 777777777777777777777777777777777777 333333 0 7 7 00 7 7 0 55 0 0 5 55555555555555555555555555 00 0 55 00000000000000 0 0 55 0 00000 5555555555 5 0 0 555 0 000 0 5 0 0 0 555 0000000000000000000000 7 0 0 0 00 00 0 0000000000000000000 0 0 0000 0 0 0 0000000 0 0 0 00000000000000 0 0 0 0 00000 0 0 0 0 0 00000 0 000 0 0 0 0 00 0 00 0 0 0 0 5 00000 00 5 5 5 000000000000000000000000000 0 0 00 0 0 0 0 000 0 0 0 0 00 0 0 0 0 0 0 0 0 000000000 0
consensus : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTNTCTAAGTTAGAAAAATAATTATAAAATTCATC-TAANG-AA---ATTTCGCTACTTTT-GTCGTTTTTATTATTATTTTTAAAATACTTCCAAAATTGCT---NN--GGTTTACAA--TGTCTTAGATTTTCTATTTCAGCCAATTTT-TTTA--GTTTAAAACGTCTTTTCTTACT----ACGCATAATATTTTTGTAAGTCGTTTTNA-ATTCGCAATAATGTTTCCTACT-G--TCTG--TTACA-TAATTG-A-ACACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTNTTTTACGAANGAC-TTATCGGTAAANGNGATATTGCTTCTATGCGTATGACGTTTTGAAAANAGTGGGTCAGCGACAC--CGCGGACAATATTGGTAAANTCATTNAT--TATCCCATTTATTGAATCT---TGTTGTGAAACGTCAATATCGCGTGTTAACTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCACGAAT---ACCGTTCCACTTA-AATTTAACCCCGTCGC---CGTCTTCAAGTACA--CGA-ANCTTTTATTACAGCACAAAGAAAAGNTAATTGGTGAGTGGTCACTCNATTCGTNNATAGGNTNAATTGTNGAAGTGACTGATATGTGGAAAATTACNCNCNTTNGTNAGTAAATANTCAATNACGGANCCCCCNTNNTGNGGCACANAGGTGCANACACCGCTGCNGCANTCGTNCCTGACTCTACCGTTNGCTATGCGTAAACGNGNCGACTTGCATAANTCAAGAAGTTTAACNCCNTGACTATTGCATGTTTTATCAAGAGAGGNCCGGTTCATGTGAACGTCGGGAACATAATANTCATCATCNGTATAAT-ATTAACCTTGTCTTGTATAATAAAATNATTNTTAGT-CCAACTCTGCTATTNATGTCACC--TGGC-A-A-ATACA--GA-CCGAA-ACTTTCATAATAATNTATATCATTTTCAAGCAATTCAAACAAATCAACATTAACAATATTATAAGCTGGTGAATCCTCCCCCCATAAGTAAA---TNCCACA---TACATAAACATCATTNTCAAAATNAAAAAAANT--TACGATCAAGTTTNANCCAAATTA-TGGTGT-C-ANAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAATGNTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA--TNTTNAAATTTNCTG-TAAAA--GTTA--TGAAATACATATCCCGA---AAGTTCAATATCACTACTNGCACNTGTC-CACGTTT-CATATAAAAATACAATGTCATTTCCAGNAAAN-ATATTTACAAAGTCACNACTGTTCTTCTTACTACCG-GGNAAGTCCATGAACATTCCGTGACAGGAAA--CGT--AGTTCACC--CTCNGCGTAATCCTAGTCCCTCACNGGCCTACCGTTGATGTATAGGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TNCCGCGCCGCCTTCATCTTTGGNAGNAGCTTNCTCCTCTTCTCTACNAT---CTCCCTTGGAAATTGTTCGTTTACANAATACGGNGTNCCTTGTAACGTCTTCCANTGTTAACGTACGAATTCCNTNTCTTTGAAC-GCGTGA-AT-T-GC-ACTAT--C--TGTTTT----CCTGCCCGANGTCTTCGCACCCATTCTATGTATCCTCTCGAACGCTATCTTNTCNACNATNNCCTTCGCNACNTNCATCCTCTCGNNNATAAAGCTNCGTACTACAGCTTCACCGCAGCNNCCGC---ACTCTCCNCCGGGGCCTCCGCAATGNTGNNAAANAANCTGAGATTGTTTCTCATGGACTGNGATTGCAGGTANACAATNTCATCTTTCNGGATTGCATTCCCTCTCNTNCNCTNATNNNACAACTTTATTGTTCACAATCACCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCAACTCTCGTTAATCTCTCATCTGATTTTTTA--TTATTT---TCATCTATGATGACCCACAGCTTTTTCAGATCGCGGTCGAACCAATCAACTTT-CTTCTCTAAGCT-CTCCAGAGCACCGAGCCTCTTGTCCATGGCACATATTTTATTGTCAATTTTCTTAAGATATGACATTAAGTCCGCATTTGTCGGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTTTCAGCATCAAATAAAACAGAGTTGGTTTGGCTCNAAATNTCACTCACCGGAATGCCACTTCANTANCCTCNGACGGGTCT-CTGGTTTCGAAANGCCTGTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTACCCTTATTCCTTCCATTCTTCATTTTAGTCTTTCCTGTCATGACTTATTAATTAAATATATTTCAAACGATTTCTAGTACAATTACCAGTAG-AAAAACGCACTGATTACAATGTAAATCATTATTGTTGTTTATATTTATCAGAGCTCCGAATTATG
Reference ( gi|1 ) : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATT-TAAAG-GA---ATTTCGCTACTTTT-ATTGTTTTTATTATTATTTTTAAAATACTTCCAAAATTGCT---GA--GGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTCTTTTCTTATT----ACGCATAATATTTTTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTGTATTACACTGATTAAAAACACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATCGGTAAAAGAAATATTGTTCCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAAT--TATCCTATTTATTAAATCT---TGT---GAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCACTCCATTCATACATAGGTTTAATT-TCAAAGTGAGAAATGCGTGGAAAATTACATTCTTTAGTGAGTAAATAATCAATGACTGAAGACCCGTTGTGAGATACAAAAGTGTACGCACCACTGCCGTAATCATCTCTGAGTCTACCGTTAACTATGCGTAAACGTGCCGACTTACATAAATCAAGAAGCTTGACCCCGTAGTTATTGCATTTTTTGTCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAACTGTCATCATCAATACAATCGTTAACTCGGTCGTGAATAATAAAATCATTCTTAGTTCCAACTCGACTATTGAGGTCACC--TGACAAGA-ATACA--GAGCCTAA-ATTTTCATAGTAATCAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACATTATTATAAACTGGTGAATCCTCTCCCCATATGTAAA---TGTCACA---TATATAAACATCATTTTCAAAATGAAAAAAAGT--TACGATCGAGTTTTAACCAAATTA-TGGTGT-C-ATGATG-ATT-TTTAACAATCTCAATACCGTCTTTCAGTTCTTCTTTATA--ATAAACTGCAATACCACCGCTACATCTTTTGGCCTTACGA--TTTTGAAATTTTCTA-TAAAA--GTTA--TGAAATATGTATCCTGA---AAGTTCAATGTCACTACTTGCACTTGTC-CATGTCT-CATATAAAAATATTATGTCATTTCCGGCTAGT-ATGTTTACAAAGTCATCACTGCTCTTCTTA--ACTGAAGACAGACCATTGACATTCCATGACAT--CA--CGTTCAGCTCATC--CTCATCGTACCCCTAGTCCCTCACAGCTCTGCCGTTGATAAACAAAGTATCGTATGCAATCCAGGATGTCTTGCCC-TCT-TGCCGCGCAGCCTTCATCCTCGGAACCAGCCTTCTTCTCCTCTCTACGAT---CTCCCTGGGGAATTGTTCGTTTACAAAATATGGAGTCCCTTGTAACGCCTTCCACTATTTACGCACCAACTCCTTCTCCTTGTAC-TCGTGAAACTTGGCAACTA------TGTTTCGACACCTGCCAGAAACCTTCGAACCCACTCTATGTACCCTCTCGAATACTATCTTCTCCACTATCTCTTTTGCAATATGCATTTGTTCAATTATAAAA-TCC---CT-CAGTTTCACTTCAGCGTCCTCGTTACTCTCTACCTGGGCCTCCGCAATATTGGAAAAAA-GC--AAATTGTTCCTCATTGACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCA-TTTTTCTCTTTCTCTAATGAAATAACTTTGTCATTTAGAATGCCTATAGAAAAGTCAGCACTATCGGTTTTCTCCTCCACCCTATTTATCCTCTCGTCTG-----TCAACTTATTTCTGTCCTCTATAACAGTCCACAACTTCTTTAACTCCTTGTCAAACCCATCAAATTTAATTTTC--ATCTCCTCCAAAGCACCCAGTCTCTTATCCATGCTAGTTATTCTACTGTCTATCTGCTTCAAGCATGCCATAATGTCTGCATTTGTTGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCATTT--GTATCGTATAACACGGAGTTTGTTTGGTTCAAAATGTCACTCACC-----GCTACTTCACTAGCCTCCGGCGGGCCTCCCGATTT--AAACGCC--TTGCTTTGTTGACATTGGTGACTTTCACTACCATTACTTCCACTACTCCCTCTATTCTTCCTTTTCACCTTTCCTCTCATGACTTACTAATCAAACATGGTCCAAACAATTTCTAGTCCAATTTCCAGAAGAAAAAACGCACTGGTTACAATGTAAATCATTATTTTTCATTACTTGTATCAGAGCTCCGAAATATGGCGTCCATT
gi|6 : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATT-TAAAG-GA---ATTTCGCTACTTTT-ATTGTTTTTATTATTATTTTTAAAATACTTCCAAAATTGCT---GT--GGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTCTTTTCTTATT----ACGCATAATATTTGTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTGTATTACACTGATTAAAAACACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATTGGTAAAAGAAATATTGTTTCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAAT--TATCCTATTTATTGAATCT---TGT---GAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCA
gi|15 : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGG
gi|14 : GTGTATCACG--CTCTTGGTTGGAATGTTCAGCATTGTTA---AAATCATGCTCGTTACAAAGTGTCT
gi|10 : gTATCAAA--CTCCTCGTTGAAATGTTTGGTTTCGTTC---AAATCGTGCCTGTTACAAAACGT-----C---TTCATAGTTTTAACAACGGAAA-ATATCTTTTTCTAAGTTAGAAAAATAATTGTAAAATTAATC-AAAAGTTATTTATTTTTCTATTTTTGATTGATTTT-TT-TTATTTC--AAATACTTCCAAAATTGCTTCCGATCGGTATACAA--TGTCTTGGATTTTCTATTTCAACCAAATTT-TTAAATGTTTAAAATGTTTTta
gi|11 : TATCAAGAGCTCCTTGTTGAA------GGTTTCGGTA---AAATCGT------TACA-----CCTCAAG---TTC-----TT---CAAC----A-ATATATTTGTTGAAATCGGAAAAATAATAAAAAAATT-ATTCTAATG-AA---ATTTCAATAATATT-GTTGCTTTAAGTAT-GTTTTTAAAATACTTCCAAAATTGCT---TC--GGTTTACAA--TGTCTAAGAATTTCTATTTCTTTC--TTTTCCTTA--ATTTAAAACGTTTTTTCGTGCT----ATTC-TGATATTTCTat
gi|2 : ATTGTTATCAAAATCATTATCAGTACAAAAAGATTCGGCATCTTCATTTGCTGT----CTGAAATATATCATTACTTAAGCTAACAAAATAATTTCGGAATTCCTC-CAATG-AT---ATGTCATTACTTCC-GGCATGATTATTCTTTTTCTTAAAATATTTCCAAAATTCTT---TA--GGTTTACAA--TATTATAAATTCTCTATATCTGATAATTTT-TTTA--ATTCAAAACATCGCTTCTTTTTCTTGACG----GTATCTTTATA-TTCTTTTTTATATTTGCAGAAATGCTCCCTATTTAAATCTGATTTACAACAGGTGTATATACGTAATGCTTCTAAATATCTGTTCTTGGCAATAACACAATCCTTATCAAACCATTCCGCATGTTTTACAAATGAC-TGGTCAGAAAATGTGACATAACTTTTATGTATATAACTTTTTGAGAATAAAGGATC--CGACACAGCACGAACTATATTGGTAAAATCATTCATAACATC--GTTGACAGAATCTCTATTT---GAATAATCAATATTCTTTGTCAATTTATTAAAATCAGACAATTTATTTATTAAACCTGAGCGAAAACGC----TCACGAAGCAAATTATCCCATTTATACTTTA----CGTCGCGCACATCTACAGGTATAGCTGA-AGGTCTT-TTACAACACAAAGAAAATTTAATGGGTGAATGGTCACTCCATTCATTAATAGGGTCAATTGTAAAAGT-ACTGATATGTGAAAAATTACTCTCATTTGTAAGTAAATAGTCAATCACGGATTCTCCGTGCTGTGGCACAAAGGTACACACATC-----CGTATTAATACCT-ATTCTACCGTTTACTATGCGTAAACAAGACGATTTGCATAACTCAAGAAGTTTAACACCCTGACTATTACATGTTTTATCAAGCGAGGACCGGTACATTGGTATATCGGGAACATAATCAATATCATCTGTATAATAATTTACCTTGTCTTGTATAATAAAATCATGTTTAGTACCAACTCTGCTATTCATATCACCCATAAC-----ATACACCGACCCGAG-ACTTTCATAAAAAACTATATCATTTTCCAGAAGTTCAAATAAATCAACATTAGCAATATTATATGCAGGGGAATCTTCCCCCCATAAATAAA---TTCCACA---TACATATACATCATTATCAAAATT-AAAGAATT--TATGATCAAGTTTAATCCAAACAA-TGGTGTCC-AAGCT--ACT-TTTAACTACCTCAATACCATTTTTTAAAGATTCCTTGTAGTATAAA--ACAATACCACCACTAGATCTTTTGGCATTACGA--TGTTTAAATTTACGG-TAAAA--ATTATGTGAAACA--TATCC--ACTCAAGCT-AATATCGCTATTAGTACATGTC-CATGATT-CATATAAGAATACTATGTCATTATCAGC-AATAATATTTACAAAGTCACAATTGTCTTTCTTACTCCT--AGTAAGTACATGAACATTCCATGACAGGAAA--CGT--AGTTCACC--CTCTGTGTAATCCTAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGAtt
gi|12 : ggtctaattcctcgaatgaacaacaA---AAATCATGCTCGTTACAAAGTGTCTc
gi|12 : TTACAAAGTGTCTTATATTTTTTATTTCAGCCAATTGT-TTAA--GTTTAAAACGTCCTTTCTTACT----ACGAATAATACTTTTGTAAGCCGTTTTAA-ATTCCTAATAATATTTTCT-------------------TAAT-----ACACACAACGCATTTAAATATCGGGTTTTAGCCATAACACATTCGGCGTCGAACCATTCAGCGTCATTTGCAAAGGACAATATTGGTAAAtatattttttatttcagccaattgtttaagtttaaaacgtcctttcttactacgaataatacttttgtaagccgttttaaattcctaataatattttcttaatacacacaacgcatttaaatatcgggttttagccataacacattcggcgtcgaaccattcagcgtcatttgcaaaggacaatattggtaaa
gi|7 : aaaatcatgctcgATATTGCTCCTATGCATGTGACATTCAGAAAAAAGTAGGTCAGCCACAT--AGCGGACAATATTGCTA--CTCATTTAG--TAGCCCATT-ATTCAATCT---TGTTGTGAAACTTCAATATTGCGTGTTAACTGATTAAAA-CAAGTAACTTTGCTAC---------TCTAAAA-TTATTTTCATGAAT---ACCGTTTCACTTA-AATTTGACTTTGTCTC---CGTCTTCAAGTACA--CGATACCTTTTATTACAGT-TAACGAAAAGCTGATTAGTGAGTGGTCACTCAATTTGTACATAGGTTAAATT-TTGAAGTGA-------GTAG-----TACATACTTTAGTTAGTAAATACTCAATAACAGAACCCTCTTTGTGAAATAC-CAAGTGCAAACACCGCTGCGGCAATCGTTTCTGACTCTATCGTTGGCTATG------CGTGTCAACTT--ATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAAA--TTCGTTTCATGTGATCGTCAGGAACAGAATAGTCATCA
gi|13 : GGACAATATTGGTAAA------------ATC--ATTTATTGAATCT---TGTTGTGAAACGTCAATATCGCGTGTTATCTTAATAAAAACAGGTAACTTTGCTACAAGACCTTATCTAAAA-atgtgc
gi|17 : TGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTT
gi|3 : AAGAGAGGCCTGGTTCATGTGAATGTCAGTTACATAACACTCATCATCAGTATAACCATTAACCTGGTCATGAATAGTAAATTTAGTCTTAATTCCAACTCGACTATTGAGGTCACC--AGGCTAGA-TTACA--GAACCTTA-ATTTTCATAGTAATTAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTC-CCCTATATGTAAA---TACCGCA---TATATAAACATCGTTTTCAAACTGAAAAAT-GT--TACGATCAAGTTTTAACCAAATTA-TGATGT-C-AAAATT-ATT-TTTAACAATCTAAATACCTTTTTTCAGTGCTTTTTGATA--ATAAAGTGCAGAACCACCGCTATATCTTCTGGCCTTACGA--TTTGAGAATTTTCTG-TAAGA--GTTA--TCAAATACATATCCTGC---AAGATTAATGTCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCCTTTTCAGCTAAT-ATGCTTACACATTCATCACTGCTCTTCTTA--ATCGTGGACAGACCATTGACATTCCGTGACAT--AA--AGATCAGCTCACT--CTCATCTTACCGATAGTATCTTACAGGTCTACCGTTTATGTACGAAGTGTCATAATCAATCCAGGATGTCTTGCCC-ATT-TGTCGCGCAGCCTTCATCCTTGGAACCAGCTTTCTACTCCTCTCTATAAT---CTCCCTGGGAAAGTGTTCGGTTACAAACTATGGAATCC-TTGGAACGTCCCCCAATGTTAATGCACCAACTCCGTCTCCTTGTAT-GCATGA----------CTA------TGTTTTGACACCTGCGAGAAATCTTCGCACCAACTCTATGTATCCTCTCGAATACTATCTTCTCTACTATCGCTTTTGCAATATGCATCC-TTTAATT-TAAAACTTC---CT-CAGTTTCATCTCAGCGGC-------------ACTTGGGCCTTCGCAATAATGGAAAAAAAGCTGAAATTGT----------CTGAGATTGCAAATAAACAATATCATCTTTCAGG---GCATTTTTTCTCATACGCTCATGAAA----------------------TATAGAAAAGTCAGTACTATCAGTT
gi|5 : aaTACAAT---TAACACTGATTTGTATAATAAAATGTTTATTA---CCAACTGTGTTATTTAT-TCACC--TG-TAACACACACC--GA-CCAAACACTTTCTTAATTATATTTATCATTTT--------TCAGA-------ATATTAA------TACAGGG-GGT-ATTCCCCTCCCTATAAATAAA---TTCCACA---CACATA--CATCATTTTCAAAATTATAGAA-TT--TGTGATCAAGCTTAATCCAAAATAATAGTAT-TTAT-ATGTATT-TCTACTAA-CTCAATATCGT-------------TTTA------AAA--G-AAT-CCATCACTAGATCGTTTGGCATTACGA--TGTTTAAATTTGCTG-TAAATTTGTT---TGTAATATATCTACTGA---AAAT--AATATCACAAATAGGACTTGCCTCA-GTTTGTATAGAAAAATACAATATCATTTCCAGAAAAA-ATATTTAC----TCAACACAATTCATCTTACTACTG--GCAAGTCCATGAAAGTGTCGTGACAG--GAAGCGT--AGTTCGCCGGCT-A-CGTAATTCTAGCCCCTCACAGGACTGCCGTTAATGCATCATTTGTCGTAAGTAAGCCAAGCTGGCTTGGCC-TCC-TACCATGCCGCCTTCATCTTTGAGAGTAACTTACGCCCCTTCTTTTCGATTACCTCCCTTGGAAATTGTTCATGAACAGAATACAGTGTGCTGTCTGACGTCTTCCATTGTTTTCGTACATATTACTCGTCTTTAAAC--AAAGATATATAGCCACTATATT--TGTTTTT---TCTGCCTTATGTCTTTGCACTCATTTAATGAATCTTTTCAAACGATATCTTATCCAc
gi|8 : TTTCAAGCAATTCAAACAGATCAACAATAATAGTATTGTAAACTGTTGAATTCTC-ACCCATAAGTAAAAACTG-CATAATTTATATAAACATCATTATCAAAATGAAAAAGAATAATACGATCGAGTGCCCACCAATTTA-TTGTGT-C-GTAATG-ATTCTTTTACACTTACAATAC-GT--TTCAATGTTTCTTTATA--ATAAAGCGCAATACCAACGCTACATCTTTTGGCATTACGCTTTTTTG-AATTTTCTATTAAAA----CA--TGAGATACATATCCCGA---AAGTTCAATACCACTTCTTGCACATGTC-CACGTTT-TATA-AAAAATATAATATTACTTCCAGAAAGA-ACG-TAACAAAGCCATTACTGCTCGTACTA--ATCGCGGATATACAATTGACA
gi|4 : -ATATTTACAAAGTCACAATTGTCTTTCTTACTCCT--AGTAAGTCCATGAACATTCCATGACAGGAAA--CGT--AGTTCACC--CTCTGCGTAATCCTAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGACGTGT--CCCATCTGTCCCTGGCTGCTCTCATCTTAGGTAGAAGCCTCTTCCTCTTCTCTACTAC---CTCTCGTGAAAATTGTTCATTTACATAAAATGCGGTACCTTGTAATGTTTTTCACTGTTAACGTACGAGTTCTCTTTCTTTGAACAGCGT-AAATTTTGCGACAATCGCCCTGTT------CCTTCCCATGGCCTTCACCCCCATTCTGTGTACTCGCTCGAACCCGATATTGTCAACAATGTCCTTCGCTACCTTCATCTTCTCGTGAATAAAGCTACGTACTACAGCTT--CTGCAGCTTCCGC---ACTCTCCCCCGAGGCTTCCGCAATGTTACTAAACA-CC--AGATTGTTTCTCATGGACTGCGATTGTAGGTACACAATTTCATC---CCGGATTACA-TCCCTCTCCTTCTCTAATCCCACAACTTTATTGTTCACAATCACCATATGAAAATCTACACTTTCTGTCTTCTCCTCAACTCTCGTTAATCTCTCATCTGATTTTTTA--TTATTT---TCATCTATGATGACCCACAGCTTTTTCAGATCGCGGTCGAACCAATCAACTTT-CTTCTCTAAGCT-CTCCAGAGCACCGAGCCTCTTGTCCATGGCACATATTTTATTGTCAATTTTCTTAAGATATGACATTAAGTCCGCATTTGTCGGTTC
gi|9 : cattatcagcaataTAGAAAAGTCAGTACTATCAGTTCTtatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttcttcgtttcagcatcaaataaaacagagttggtttggctcaaaatttcactcaccggaatgttatcagtatcctcagacgggtctctggtttcgaaaagtttgttgttttgttcttcactatcacaa
gi|4 : TCGTTTCAGCATCAAATAAAACAGAGTTGGTTTGGCTCAAAATTTCACTCACCGGAATGTTA--TCAGTATCCTCAGACGGGTCT-CTGGTTTCGAAAAGTTTGTTGTTTTGTTaaatgtcactcaccgccacttcactagtttccgatgccttgctttgttgacattgttgactttcactaccattactacccttattccttccattcttcattttagtctttcctgtcatgacttattaattaaatatatttcaaacgatttctagtacaattaccagtagaaaaacgcactgattacaatgtaaatcattattgttgtttatatttatcagagctccgaattatgaaaaccat
gi|9 : cattatcagcaataatatttacaaagtcacaattgtctttcttactcctagtaagtccatgaacattccatgacaggaaacgtagttcaccctctgcgtaatcctagtccctcactggcctaccgttgatatatagggtgtcgtaagcaatccacgacgtgtcccatctgtccctggctgctctcatcttaggtagaagcctcttcctcttctctactacctctcgtgaaaattgttcatttacataaaatgcggtaccttgtaatgtttttcactgttaacgtacgagttctctttctttgaacagcgtaaattttgcgacaatcgccctgttccttcccatggccttcacccccattctgtgtactcgctcgaacccgatattgtcaacaatgtccttcgctaccttcatcttctcgtgaataaagctacgtactacagcttctgcagcttccgcactctcccccgaggcttccgcaatgttactaaacaccagattgtttctcatggactgcgattgtaggtacacaatttcatcccggattacatccctctccttctctaatcccacaactttattgttcacaatcaccatatgaaaatctacactttctgtcttctcctcaactctcgttaatctctcatctgattttttattattttcatctatgatgacccacagctttttcagatcgcggtcgaaccaatcaactttcttctctaagctctccagagcaccgagcctcttgtccatggcacatattttattgtcaattttcttaagatatgacattaagtccgcatttgtcggttctatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttctGTTCTAAATGTCACTCACC-----GCCACTTCACTAGTTTCCG--------------------ATGCC--TTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTACCCTTATTCCTTCCATTCTTCATTTTAGTCTTTCCTGTCATGACTTATTAATTAAATATATTTCAAACGATTTCTAGTACAATTACCAGTAG-AAAAACGCACTGATTACAATGTAAATCATTATTGTTGTTTATATTTATCAGAGCTCCGAATTATGcttcactatcacaa
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|16 ): TAGAAAAGTCAGTACTTCAGTACATAATGAAACTCACCGTACAAACTTTTCACTAGTTTATCCG
Alignments
lowQualScore : 11111111111111111111111111111111111111 11111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 111 111 1111 1111111 111111 11 1 33333333333333333333333333333333333333 1 1111 111 1 111 111 3 2 3333333 1 111111 1 1 222 333 3333333333333 1 2 11111 1 22222 22222 11 11 111 222222222222 11 11 1 1 111 1 22222222222222222222222222222222222222222222 11111 444444 1111 222222222 1111111 11 33 11111111 333 2222 33333333333333333333 2222 3333333333 333 22 11 2 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11 44444 11111111 1 333333 22 2
lowQualScore : 99 000 0 444 0 111 111 5 8 1 1 1 33 0 44 1 4 1 8 55 7777 99 8888888 99 2 6 99 999999 6 00 3 2 1 0 11111111111111111111111111111111111111 1 1 0 1 11 3 0 1 3 4 6666 0 1 8 11 3 1 5 88 55 2 2 3 3 6 0 2 777 2 0 8888 777 555 0 1 3 3 1 3 1 0 22 1 1 3 11 6 2222222 7 222 1 1 1 1 1 3 44 1 22 1 11 88 0 1 2 1 0 1 0 11 6 3 11 333333 1 2 1 1 1 0 0 2 1 2 0 1 2 1 444 0 3 3 4 1 1 333 3 1 99 3333333333333 0 3 0 88888 55 4 0 1 3 1 3 4 6 1 3 1 1 00000 6 1 1 33333 1 1 8 55 8 8 3 77777777 0 11 0 11 0 1 0 8 1 1 1 8 444 0 1 8 0 99 1 1 8 9 8 5 1 1 55 1 33 666666666666 1 3 11 44 5 11 1 1 1 1 3 0 0 1 00 6 1 1 33 1 0 1 777 3 1 2 1 0 1 4 6 1 1 4 66666666666666666666666666666666666666666666 66 1 4 1 1 1 22 0 0 1 11 1 0 0 33333 77 1 222222 0 8888 333333333 8888888 11 55 1 88 00 0 11111111 1 0 11 1 1 7 1 777 0000 1 1 1 1 00000000000000000000 4444 6 3 55 4 5555555555 555 3 3 333 3 2 22 88 2 0 2 2 66 4 3 3 3 4 4 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 88 4 3 2 0 1 1 22222 0 6 1 66666666 3 1 000000 1 22 3 4 2 3 3 2 3 3 4 4 0 2 66 4 3 4
lowQualScore : .. ... . ... . ... ... . . . . . .. . .. . . . . .. .... .. ....... .. . . .. ...... . .. . . . . ...................................... . . . . .. . . . . . .... . . . .. . . . .. .. . . . . . . . ... . . .... ... ... . . . . . . . . .. . . . .. . ....... . ... . . . . . . .. . .. . .. .. . . . . . . . .. . . .. ...... . . . . . . . . . . . . . . ... . . . . . . ... . . .. ............. . . . ..... .. . . . . . . . . . . . . ..... . . . ..... . . . .. . . . ........ . .. . .. . . . . . . . . ... . . . . .. . . . . . . . . .. . .. ............ . . .. .. . .. . . . . . . . . .. . . . .. . . . ... . . . . . . . . . . . ............................................ .. . . . . . .. . . . .. . . . ..... .. . ...... . .... ......... ....... .. .. . .. .. . ........ . . .. . . . . ... .... . . . . .................... .... . . .. . .......... ... . . ... . . .. .. . . . . .. . . . . . . .............................................................................................................................................. .. . . . . . . ..... . . . ........ . . ...... . .. . . . . . . . . . . . . .. . . .
lowQualScore : 22 000 7 000 8 666 666 6 0 0 0 0 66 8 66 4 6 0 0 22 0000 22 7777777 22 2 7 22 222222 4 66 2 5 0 0 22222222222222222222222222222222222222 0 0 0 0 77 0 2 0 2 2 5555 8 0 8 66 6 4 6 88 88 2 2 5 5 7 8 0 555 0 0 0000 555 888 0 0 2 2 0 0 0 7 00 0 0 3 77 7 3333333 3 777 0 0 0 0 0 7 77 0 00 0 33 33 7 0 0 0 7 0 7 77 7 7 77 000000 0 0 0 0 0 7 7 5 0 0 0 0 5 0 888 2 0 5 0 0 0 555 0 0 55 0000000000000 0 0 0 88888 00 0 6 8 2 8 2 0 0 4 2 4 0 00000 0 0 0 44444 0 0 0 00 0 0 8 00000000 6 00 8 44 8 0 6 0 0 0 0 0 222 8 4 0 6 00 0 0 0 6 0 6 4 0 77 7 22 444444444444 4 2 00 22 6 00 0 4 4 0 2 0 0 0 55 5 2 0 55 0 2 0 555 0 0 0 0 8 0 0 5 0 0 0 00000000000000000000000000000000000000000000 88 0 2 0 0 0 00 7 7 0 77 0 7 7 33333 33 0 000000 7 3333 333333333 3333333 77 00 0 33 33 7 77777777 0 7 33 0 0 3 0 777 7777 0 0 0 0 00000000000000000000 0000 0 0 00 0 5555555555 000 0 0 000 0 5 55 55 5 0 5 5 55 0 0 0 0 0 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 00 0 0 5 7 0 0 77777 7 7 0 00000000 3 0 777777 0 33 0 0 5 0 0 5 0 0 0 0 0 5 55 0 0 0
consensus : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACT---AGCTTCTG--T--TACACTGATT--A-A-A--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA--GATGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAAC-AGTCATCATCAGTATAATCA-TTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-AN--AC-ACNGAGCC-NAA-ACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATGAAAAAAANT--TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCG-AGNA-AGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTACAAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTGA---A--TT--G-CGAC--TATC----TG-TTTTGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTCC-CC-GGGCCTCCGCAATATTG-NAAAAAAGC--AAATTGTTCCTCAT-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAATGA-ACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCTC-GGCGGGTCT-CCGGTTT--AAACGCCT-TTGCTTTGTTGACATTGNTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
Reference ( family-8600 ) : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTNTCTAAGTTAGAAAAATAATTATAAAATTCATCTAANGAAATTTCGCTACTTTTGTCGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----NNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGCCAATTTT-TTTA--GTTTAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTCGTTTTNA-ATTCGCAATAATGTTTCCTACT---G---TCTG--T--TACA-TAATT--G-A-A--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTNTTTTACGAANGAC-TTATCGGTAAANGNGATATTGCTTCTATGCGTATGACGTTTTGAAAANAGTGGGTCAGCGACAC--CGCGGACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAACGTCAATATCGCGTGTTAACTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCACGAAT---ACCGTTCCACTTA-AATTTAACCCCGTCGC---CGTCTTCAAGTACA--CGA-ANCTTTTATTACAGCACAAAGAAAAGNTAATTGGTGAGTGGTCACTCNATTCGTNNATAGGNTNAATTGTNGAAGTGACTGATATGTGGAAAATTACNCNCNTTNGTNAGTAAATANTCAATNACGGANCCCCCNTNNTGNGGCACANAGGTGCANACACCGCTGCNGCANTCGTNCCTGACTCTACCGTTNGCTATGCGTAAACGNGNCGACTTGCATAANTCAAGAAGTTTAACNCCNTGACTATTGCATGTTTTATCAAGAGAGGNCCGGTTCATGTGAACGTCGGGAACATAAT-ANTCATCATCNGTATAAT-A-TTAACCTTGTCTTGTATAATAAAATNATTNTTAGT-CCAACTCTGCTATTNATGTCACC--TG--GC-AA--AT-ACAGA-CC-GAA-ACTTTCATAATAATNTATATCATTTTCAAGCAATTCAAACAAATCAACATTAACAATATTATAAGCTGGTGAATCCTCCCCCCATAAGTAAATNCCACATA-----CATAAACATCATTNTCAAAATNAAAAAAANT--TACGATCAAGTTTNANCCAAATTA-TGGTGTCANAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAATGNTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TNTTNAAATTTNCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTNGCACNTGTC-CACGTTT-CATATAAAAATACAATGTCATTTCCAGNAAANATATTTACAAAGTCACNACTGTTCTTCTTACTACCG-GGNA-AGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCNGCGTAATCC--TAGTCCCTCACNGGCCTACCGTTGATGTATAGGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TNCCGCGCCGCCTTCATCTTTGGNAGNAGCTTNCTCCTCTTCTCTACNAT---CTCCCTTGGAAATTGTTCGTTTACANAATACGGNGTNCCTTGTAACGTCTTCCANTGTTAACGTACGAATTCCNTNTCTTTGAAC-GCGTGA---A--TT--G-C-AC--TATC----TG-TTTT----CCTGCCCGANGTCTTCGCACCCATTCTATGTATCCTCTCGAACGCTATCTTNTCNACNATNNCCTTCGCNACNTNCATCCTCTCGNNNATAAAGCTNCGTACTACAGCTTCACCGCAGCNNCCGC---ACTCTCCNCCGGGGCCTCCGCAATGNTGNNAAANAANCTGAGATTGTTTCTCATGGACTGNGATTGCAGGTANACAATNTCATCTTTCNGGATTGCATTCCCTCTCNTNCNCTNATNNNACAACTTTATTGTTCACAATCACCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCAACTCTCGTTAATCTCTCATCTGATTTTTTA--TTATTT---TCATCTATGATGACCCACAGCTTTTTCAGATCGCGGTCGAACCAATCAACTTT-CTTCTCTAAGCT-CTCCAGAGCACCGAGCCTCTTGTCCATGGCACATATTTTATTGTCAATTTTCTTAAGATATGACATTAAGTCCGCATTTGTCGGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTTTCAGCATCAAATAAAACAGAGTTGGTTTGGCTCNAAATNTCACTCACCGGAATGCCACTTCANTANCCTCNGACGGGTCT-CTGGTTTCGAAANGCCTGTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTACCCTTATTCCTTCCATTCTTCATTTTAGTCTTTCCTGTCATGACTTATTAATTAAATATATTTCAAACGATTTCTAGTACAATTACCAGTAG-AAAAACGCACTGATTACAATGTAAATCATTATTGTTGTTTATATTTATCAGAGCTCCGAATTATG
gi|1 : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATTTAAAGGAATTTCGCTACTTTTATTGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----GAGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTATTACGCATAATATTTTTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACT---AGCTTCTG--TATTACACTGATT--A-A-AAACACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATCGGTAAAAGAAATATTGTTCCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAATTATCCTATTTATTAAATCT-TGT---GAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCACTCCATTCATACATAGGTTTAATT-TCAAAGTGAGAAATGCGTGGAAAATTACATTCTTTAGTGAGTAAATAATCAATGACTGAAGACCCGTTGTGAGATACAAAAGTGTACGCACCACTGCCGTAATCATCTCTGAGTCTACCGTTAACTATGCGTAAACGTGCCGACTTACATAAATCAAGAAGCTTGACCCCGTAGTTATTGCATTTTTTGTCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAAC-TGTCATCATCAATACAATCG-TTAACTCGGTCGTGAATAATAAAATCATTCTTAGTTCCAACTCGACTATTGAGGTCACC--TG--AC-AAGAAT-ACAGAGCC-TAA-ATTTTCATAGTAATCAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACATTATTATAAACTGGTGAATCCTCTCCCCATATGTAAATGTCACATA-----TATAAACATCATTTTCAAAATGAAAAAAAGT--TACGATCGAGTTTTAACCAAATTA-TGGTGTCATGATG-ATT-TTTAACAATCTCAATACCGTCTTTCAGTTCTTCTTTATA--ATAAACTGCAATACCACCGCTACATCTTTTGGCCTTACGA-TTTTGAAATTTTCTA-TAAAA--GTTATGAAATATGTATCC-TGAAAGTTCAATGTCACTACTTGCACTTGTC-CATGTCT-CATATAAAAATATTATGTCATTTCCGGCTAGTATGTTTACAAAGTCATCACTGCTCTTCTTA--ACTG-AAGACAGACCATTGACATTCCATGACAT--CACGTTCAGCTCATCCTCATCGTACCCC--TAGTCCCTCACAGCTCTGCCGTTGATAAACAAAGTATCGTATGCAATCCAGGATGTCTTGCCC-TCT-TGCCGCGCAGCCTTCATCCTCGGAACCAGCCTTCTTCTCCTCTCTACGAT---CTCCCTGGGGAATTGTTCGTTTACAAAATATGGAGTCCCTTGTAACGCCTTCCACTATTTACGCACCAACTCCTTCTCCTTGTAC-TCGTGA---AACTTG-G-CAAC--TA------TG-TTTCGACACCTGCCAGAAACCTTCGAACCCACTCTATGTACCCTCTCGAATACTATCTTCTCCACTATCTCTTTTGCAATATGCATTTGTTCAATTATAAAA-TCC---CT-CAGTTTCACTTCAGCGTCCTCGTTACTCTCTACCTGGGCCTCCGCAATATTG-GAAAAAAGC--AAATTGTTCCTCATTGACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATT-TTTCTCTTTCTCTAATGAAATAACTTTGTCATTTAGAATGCCTATAGAAAAGTCAGCACTATCGGTTTTCTCCTCCACCCTATTTATCCTCTCGTCTG-----TCAACTTATTTCTGTCCTCTATAACAGTCCACAACTTCTTTAACTCCTTGTCAAACCCATCAAATTTAATTTTC--ATCTCCTCCAAAGCACCCAGTCTCTTATCCATGCTAGTTATTCTACTGTCTATCTGCTTCAAGCATGCCATAATGTCTGCATTTGTTGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCATTT--GTATCGTATAACACGGAGTTTGTTTGGTTCAAAATGTCACTCACC-----GCTACTTCACTAGCCTCCGGCGGGCCTCCCGATTT--AAACGCC--TTGCTTTGTTGACATTGGTGACTTTCACTACCATTACTTCCACTACTCCCTCTATTCTTCCTTTTCACCTTTCCTCTCATGACTTACTAATCAAACATGGTCCAAACAATTTCTAGTCCAATTTCCAGAAGAAAAAACGCACTGGTTACAATGTAAATCATTATTTTTCATTACTTGTATCAGAGCTCCGAAATATG
gi|10 : TATCAAA--CTCCTCGTTGAAATGTTTGGTTTCGTTC---AAATCGTGCCTGTTACAAAACGT-----C---TTCATAGTTTTAACAACGGAAA-ATATCTTTTTCTAAGTTAGAAAAATAATTGTAAAATTAATCAAAAGTTATT----TATTTTTCTATTTTTGATTGATTTTTTTTATTTCAAATACTTCCAAAAT--TGCTTCCGATCGGTATACAA--TGTCTTGGATTTTCTATTTCAACCAAATTT-TTAAATGTTTAAAATGTT------TTgcgtccatt
gi|11 : TATCAAGAGCTCCTTGTTGAA------GGTTTCGGTA---AAATCGT------TACA-----CCTCAAG---TTC-----TT---CAAC----A-ATATATTTGTTGAAATCGGAAAAATAATAAAAAAATTATTCTAATGAAATTTCAATAATATTGTTGCTTTAAGT-AT-GTTTTTA----AAATACTTCCAAAAT--TGCT-----TCGGTTTACAA--TGTCTAAGAATTTCTATTTCTTTC--TTTTCCTTA--ATTTAAAACGTT------TTTTCGTGCTATTC-TGATATTTCTat
gi|12 : AAAATCATGCT-----CG---TTACAAAGTGTCTTATATTTTTTATTTCAGCCAATTGT-TTAA--GTTTAAAACGTC------CTTTCTTACTACGAATAATACTTTTGTAAGCCGTTTTAA-ATTCCTAATAATATTTTCT------------------------TAAT-------A--CACACAACGCATTTAAATATCGGGTTTTAGCCATAACACATTCGGCGTCGAACCATTCAGCGTCATTTGCAAAGGACAATATTGGTAAAtt
gi|13 : GGACAATATTGGTAAAATCATT------------TATTGAATCT-TGTTGTGAAACGTCAATATCGCGTGTTATCTTAATAAAAACAGGTAACTTTGCTACAAGACCTTATCTAAAA-
gi|14 : GTGTATCACG--CTCTTGGTTGGAATGTTCAGCATTGTTA---AAATCATGCTCGTTACAAAGTGTCT
gi|15 : gGTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGta
gi|16 : TAGAAAAGTCAGTACT-TCAGT
gi|17 : TGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTacataatgaaactcaccgtacaaacttttcactagtttatccg
gi|2 : ATTGTTATCAAAATCATTATCAGTACAAAAAGATTCGGCATCTTCATTTGCTGT----CTGAAATATATCATTACTTAAGCTAACAAAATAATTTCGGAATTCCTCCAATGATATGTCATTACTTCCGGCATGATTATT-CTTTTTCTTA----AAATATTTCCAAAAT--TCTT-----TAGGTTTACAA--TATTATAAATTCTCTATATCTGATAATTTT-TTTA--ATTCAAAACATCGCTTCTTTTTCTTG--ACG----GTATCTTTATA-TTCTTTTTTATATTTGCAGAAATGCTCCCTATTTAAA---TCTGATT--TACAACAGGT--GTATA--TACGTAATGCTTCTAAATATCTGTTCTTGGCAATAACACAATCCTTATCAAACCATTCCGCATGTTTTACAAATGAC-TGGTCAGAAAATGTGACATAACTTTTATGTATATAACTTTTTGAGAATAAAGGATC--CGACACAGCACGAACTATATTGGTAAAATCATTCATAACATCGTTGACAGAATCTCTATT-TGAATAATCAATATTCTTTGTCAATTTATTAAAATCAGACAATTTATTTATTAAACCTGAGCGAAAACGC----TCACGAAGCAAATTATCCCATTTATACTTTA----CGTCGCGCACATCTACAGGTATAGCTGA-AGGTCTT-TTACAACACAAAGAAAATTTAATGGGTGAATGGTCACTCCATTCATTAATAGGGTCAATTGTAAAAGT-ACTGATATGTGAAAAATTACTCTCATTTGTAAGTAAATAGTCAATCACGGATTCTCCGTGCTGTGGCACAAAGGTACACACATC-----CGTATTAATACCT-ATTCTACCGTTTACTATGCGTAAACAAGACGATTTGCATAACTCAAGAAGTTTAACACCCTGACTATTACATGTTTTATCAAGCGAGGACCGGTACATTGGTATATCGGGAACATAATCAAT-ATCATCTGTATAAT-AATTTACCTTGTCTTGTATAATAAAATCATGTTTAGTACCAACTCTGCTATTCATATCACCCATA--AC-AT--AC-ACCGA-CCCGAG-ACTTTCATAAAAAACTATATCATTTTCCAGAAGTTCAAATAAATCAACATTAGCAATATTATATGCAGGGGAATCTTCCCCCCATAAATAAATTCCACATA-----CATATACATCATTATCAAAATTAAAGAA-TT--TATGATCAAGTTTAATCCAAACAA-TGGTGTCCAAGCT-ACT-TTTAACTACCTCAATACCATTTTTTAAAGATTCCTTGTAGTATAAAAC--AATACCACCACTAGATCTTTTGGCATTACGA-TGTTTAAATTTACGG-TAAAA--ATTATGTGAAACATATCCACTCAAGCT-AATATCGCTATTAGTACATGTC-CATGATT-CATATAAGAATACTATGTCATTATCAGCAATAATATTTACAAAGTCACAATTGTCTTTCTTACT-CCT-AGTA-AGTACATGAACATTCCATGACAGGAAACGT--AGTTCACCCTCTGTGTAATCC--TAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGAC
gi|3 : ggtctaattcctcgaatgaacaacaAAGAGAGGCCTGGTTCATGTGAATGTCAGTTACATAAC-ACTCATCATCAGTATAACCA-TTAACCTGGTCATGAATAGTAAATTTAGTCTTAATTCCAACTCGACTATTGAGGTCACC--AG--GCTAG--ATTACAGAACC-TTA-ATTTTCATAGTAATTAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCT-ATATGTAAATACCGCATA-----TATAAACATCGTTTTCAAACTGAAAAAT-GT--TACGATCAAGTTTTAACCAAATTA-TGATGTCAAAATT-ATT-TTTAACAATCTAAATACCTTTTTTCAGTGCTTTTTGATA--ATAAAGTGCAGAACCACCGCTATATCTTCTGGCCTTACGA-TTTGAGAATTTTCTG-TAAGA--GTTATCAAATACATATCC-TGCAAGATTAATGTCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCCTTTTCAGCTAATATGCTTACACATTCATCACTGCTCTTCTTA--ATCGTGGAC-AGACCATTGACATTCCGTGACATAAAGATC--AGCTCACTCTCATCTTA--CCGATAGTATCTTACAGGTCTACCGTTTATGTACGAAGTGTCATAATCAATCCAGGATGTCTTGCCC-ATT-TGTCGCGCAGCCTTCATCCTTGGAACCAGCTTTCTACTCCTCTCTATAAT---CTCCCTGGGAAAGTGTTCGGTTACAAACTATGGAAT-CCTTGGAACGTCCCCCAATGTTAATGCACCAACTCCGTCTCCTTGTAT-GCATG---------------AC--TA------TG-TTTTGACACCTGCGAGAAATCTTCGCACCAACTCTATGTATCCTCTCGAATACTATCTTCTCTACTATCGCTTTTGCAATATGCATCCTTT--AATTTAAAACTTC---CT-CAGTTTCATCTCAGCG---GC---ACTT-------GGGCCTTCGCAATAATGGAAAAAAAGCTGAAATTGT----------CTGAGATTGCAAATAAACAATATCATCTTTCAGG---GCATTTTTTCTCATACGCTCATGA------------------AAT----ATAGAAAAGTCAGTACTATCAGTTC
gi|4 : aaCATTATCAGCAATAATATTTACAAAGTCACAATTGTCTTTCTTACT-CCT-AGTA-AGTCCATGAACATTCCATGACAGGAAACGT--AGTTCACCCTCTGCGTAATCC--TAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGACGTGT--CCCATCTGTCCCTGGCTGCTCTCATCTTAGGTAGAAGCCTCTTCCTCTTCTCTACTAC---CTCTCGTGAAAATTGTTCATTTACATAAAATGCGGTACCTTGTAATGTTTTTCACTGTTAACGTACGAGTTCTCTTTCTTTGAACAGCGTAA---A--TTTTG-CGAC--AATCGCCCTG-TT------CCTTCCCATGGCCTTCACCCCCATTCTGTGTACTCGCTCGAACCCGATATTGTCAACAATGTCCTTCGCTACCTTCATCTTCTCGTGAATAAAGCTACGTACTACAGCTTC--TGCAGCTTCCGC---ACTCTCCCCCGAGGCTTCCGCAATGTTACTAAACA-CC--AGATTGTTTCTCATGGACTGCGATTGTAGGTACACAATTTCATC---CCGGATTACAT-CCCTCTCCTTCTCTAATCCCACAACTTTATTGTTCACAATCACCATATGAAAATCTACACTTTCTGTCTTCTCCTCAACTCTCGTTAATCTCTCATCTGATTTTTTA--TTATTT---TCATCTATGATGACCCACAGCTTTTTCAGATCGCGGTCGAACCAATCAACTTT-CTTCTCTAAGCT-CTCCAGAGCACCGAGCCTCTTGTCCATGGCACATATTTTATTGTCAATTTTCTTAAGATATGACATTAAGTCCGCATTTGTCGGTTC
gi|4 : TCGTTTCAGCATCAAATAAAACAGAGTTGGTTTGGCTCAAAATTTCACTCACCGGAATGTTA--TCAGTATCCTCAGACGGGTCT-CTGGTTTCGAAAAGTTTGTTGTTTTGTTtatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttcttcgtttcagcatcaaataaaacagagttggtttggctcaaaatttcactcaccggaatgttatcagtatcctcagacgggtctctggtttcgaaaagtttgttgttttgttcttcactatcacaa
gi|5 : cattatcagcaataatatttacaaagtcacaattgtctttcttactcctagtaagtccatgaacattccatgacaggaaacgtagttcaccctctgcgtaatcctagtccctcactggcctaccgttgatatatagggtgtcgtaagcaatccacgacgtgtcccatctgtccctggctgctctcatcttaggtagaagcctcttcctcttctctactacctctcgtgaaaattgttcatttacataaaatgcggtaccttgtaatgtttttcactgttaacgtacgagttctctttctttgaacagcgtaaattttgcgacaatcgccctgttccttcccatggccttcacccccattctgtgtactcgctcgaacccgatattgtcaacaatgtccttcgctaccttcatcttctcgtgaataaagctacgtactacagcttctgcagcttccgcactctcccccgaggcttccgcaatgttactaaacaccagattgtttctcatggactgcgattgtaggtacacaatttcatcccggattacatccctctccttctctaatcccacaactttattgttcacaatcaccatatgaaaatctacactttctgtcttctcctcaactctcgttaatctctcatctgattttttattattttcatctatgatgacccacagctttttcagatcgcggtcgaaccaatcaactttcttctctaagctctccagagcaccgagcctcttgtccatggcacatattttattgtcaattttcttaagatatgacattaagtccgcatttgtcggttctatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttct-A-TTAACACTGATTTGTATAATAAAATGTTTATTA---CCAACTGTGTTATTTAT-TCACC--TGTAAC-AC--AC-ACCGA-CC-AAACACTTTCTTAATTATATTTATCATTTT--------TCAGA-------ATATTAA------TACAGGG-GGT-ATTCCCCTCCCTATAAATAAATTCCACACA-----CATA--CATCATTTTCAAAATTATAGAA-TT--TGTGATCAAGCTTAATCCAAAATAATAGTATTTATATGTATT-TCTACTAA-CTCAATATCGTTTT------------------A-AAAG---AAT-CCATCACTAGATCGTTTGGCATTACGA-TGTTTAAATTTGCTG-TAAATTTGTT-TGTAATATATCTAC-TGAAAAT--AATATCACAAATAGGACTTGCCTCA-GTTTGTATAGAAAAATACAATATCATTTCCAGAAAAAATATTTAC----TCAACACAATTCATCTTACTACTG-G-CA-AGTCCATGAAAGTGTCGTGACAGGAAGCGT--AGTTCGCCGGCTACGTAATTC--TAGCCCCTCACAGGACTGCCGTTAATGCATCATTTGTCGTAAGTAAGCCAAGCTGGCTTGGCC-TCC-TACCATGCCGCCTTCATCTTTGAGAGTAACTTACGCCCCTTCTTTTCGATTACCTCCCTTGGAAATTGTTCATGAACAGAATACAGTGTGCTGTCTGACGTCTTCCATTGTTTTCGTACATATTACTCGTCTTTAAAC-AAA-GATATA--TA--GCC-ACTATATT----TGTTTTT----TCTGCCTTATGTCTTTGCACTCATTTAATGAATCTTTTCAAACGATATCTTATCCActtcactatcacaa
gi|6 : tacaGTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATTTAAAGGAATTTCGCTACTTTTATTGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----GTGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTATTACGCATAATATTTGTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACT---AGCTTCTGTAT--TACACTGATTAAA-A-A--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATTGGTAAAAGAAATATTGTTTCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAATTATCCTATTTATTGAATC----TTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCA
gi|7 : ATATTGCTCCTATGCATGTGACATTCAGAAAAAAGTAGGTCAGCCACAT--AGCGGACAATATTGCTA--CTCATTTAGTAGCCCATT-ATTCAATCT-TGTTGTGAAACTTCAATATTGCGTGTTAACTGATTAAAA-CAAGTAACTTTGCTAC---------TCTAAAA-TTATTTTCATGAAT---ACCGTTTCACTTA-AATTTGACTTTGTCTC---CGTCTTCAAGTACA--CGATACCTTTTATTACAGT-TAACGAAAAGCTGATTAGTGAGTGGTCACTCAATTTGTACATAGGTTAAATT-TTGAAGTGA-------GTAG-----TACATACTTTAGTTAGTAAATACTCAATAACAGAACCCTCTTTGTGAAATAC-CAAGTGCAAACACCGCTGCGGCAATCGTTTCTGACTCTATCGTTGGCTATGCGT------GTCAACTT--ATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAAA--TTCGTTTCATGTGATCGTCAGGAACAGAAT-AGTCATCA
gi|8 : TTTCAAGCAATTCAAACAGATCAACAATAATAGTATTGTAAACTGTTGAATTCTCACCC-ATAAGTAAAAACTGCATAATTTATATAAACATCATTATCAAAATGAAAAAGAATAATACGATCGAGTGCCCACCAATTTA-TTGTGTCGTAATG-ATTCTTTTACACTTACAATAC-GTTT--CAATGTTTCTTTATA--ATAAAGCGCAATACCAACGCTACATCTTTTGGCATTACGCTTTTTTGAATTTTCTATTAAAA----CATGAGATACATATCC-CGAAAGTTCAATACCACTTCTTGCACATGTC-CACGTTT-TATA-AAAAATATAATATTACTTCCAGAAAGAACG-TAACAAAGCCATTACTGCTCatgtgc
gi|9 : TAGAAAAGTCAGTACTATCAGTTCTgtactaatcgcggatatacaattgaca
gi|9 : GTTCTAAATGTCACTCACCG-----CCACTTCACTA-----------GTTT-CCG--------ATGCCT--TGCTTTGTTGACATTGTTGACTTTCACTACCATTACTACCCTTATTCCTTCCATTCTTCATTTTAGTCTTTCCTGTCATGACTTATTAATTAAATATATTTCAAACGATTTCTAGTACAATTACCAGTAG-AAAAACGCACTGATTACAATGTAAATCATTATTGTTGTTTATATTTATCAGAGCTCCGAATTATGaaatgtcactcaccgccacttcactagtttccgatgccttgctttgttgacattgttgactttcactaccattactacccttattccttccattcttcattttagtctttcctgtcatgacttattaattaaatatatttcaaacgatttctagtacaattaccagtagaaaaacgcactgattacaatgtaaatcattattgttgtttatatttatcagagctccgaattatgaaaaccat
Alignments
lowQualScore : 111 111 111 1111 1111111 111111 11 1 1111111 444444444444444444444444 1 11 111 1 111 11 1 44444444 1 333333 1 1 1111111111111 1 1 1 1 22222 22222 11 11 111 222 1 11 11 1 1 111 11 1 8888888888888888888888888888888 222222 1111 222 1 222 3333333333 1 11 333333333 222 1 8888888888888888888888888888 22222 11 222 11 11 1 11 444444 555555555 1 333333333333 1
lowQualScore : 99 000 0 444 0 111 111 5 8 1 1 1 22 0 44 1 4 1 8 11 7777 99 9999999 99 0 6 99 999999 6 00 3 1 0 0 0000000 111111111111111111111111 0 1 0 1 0 0 3 4 33 1 0 1 8 11 3 1 5 88 55 1 1 3 3 6 0 777 0 4444 777 33 8 0 3 3 1 2 0 1 3 44 33333333 7 1 1 1 3 1 7 0 2 0 1 6 1 1 444444 1 2 2 0 0 0 2 0 2 1 1 0 0 777 1 1 77 9999999999999 0 1 2 1 0 11 1 0 1 3 1 3 4 6 1 3 1 1 00000 6 1 33333 1 1 8 77 8 8 3 66 5555 0 11 0 11 0 1 0 8 0 1 1 8 444 0 1 8 0 99 1 1 8 3 8 5 1 1 1 11 111 6 1 6 1 3 11 22 5 11 1 1 1 1 3 0 0 0 00 1 4 1 11 1 0 0 777 1 33 66 0 0 1 1 0 0 1 3333333333333333333333333333333 111111 11 1 0 1 0 0 1111 6 1 333 3 6 7 333 8888888888 3 1 88 111111111 7 333 7 2 1 5555555555555555555555555555 6 1 22 1 77777 88 000 1 1 1 2 1 1 66 88 1 5 1 1 22 1 1 1 1 1 1 88 1 1 1 111111 6 777777777 3 0 000000000000 7 6 6 1 6 1 1 1 2 1 1 1 1 1 5 1 22 1 1 1
lowQualScore : .. ... . ... . ... ... . . . . . .. . .. . . . . .. .... .. ....... .. . . .. ...... . .. . . . . ....... ........................ . . . . . . . . .. . . . . .. . . . .. .. . . . . . . ... . .... ... .. . . . . . . . . . .. ........ . . . . . . . . . . . . . . ...... . . . . . . . . . . . . . ... . . .. ............. . . . . . .. . . . . . . . . . . . . ..... . . ..... . . . .. . . . .. .... . .. . .. . . . . . . . . ... . . . . .. . . . . . . . . . .. ... . . . . . .. .. . .. . . . . . . . . .. . . . .. . . . ... . .. .. . . . . . . . ............................... ...... .. . . . . . .... . . ... . . . ... .......... . . .. ......... . ... . . . ............................ . . .. . ..... .. ... . . . . . . .. .. . . . . .. . . . . . . .. . . . ...... . ......... . . ............ . . . . . . . . . . . . . . . . .. . . .
lowQualScore : 22 000 7 000 8 666 666 6 0 0 0 4 88 8 66 4 6 0 0 88 0000 22 2222222 22 3 7 22 222222 4 66 2 0 2 0 2222222 222222222222222222222222 8 2 0 0 2 2 2 2 88 0 8 0 8 66 6 4 6 88 88 4 4 5 5 7 8 555 0 5555 555 88 8 8 2 2 0 5 7 0 3 33 77777777 3 0 0 0 7 0 3 7 0 7 0 7 0 0 000000 0 0 5 2 0 2 5 2 5 0 0 2 2 000 0 0 55 5555555555555 0 0 8 0 0 22 0 6 4 2 4 2 0 0 4 2 4 0 00000 0 4 44444 0 4 0 88 0 0 8 44 6666 6 00 8 44 8 0 6 0 6 0 0 0 222 8 4 0 6 00 4 4 0 8 0 6 4 0 7 33 222 0 0 0 4 2 00 44 6 00 4 4 4 0 2 0 0 2 55 0 2 2 22 2 2 2 555 0 88 00 8 2 0 0 8 2 0 0000000000000000000000000000000 222222 22 2 8 0 2 7 0000 7 0 333 3 7 3 333 0000000000 3 0 33 333333333 3 333 3 0 0 7777777777777777777777777777 0 0 00 0 55555 00 555 0 0 0 5 0 0 55 55 0 0 0 0 00 0 0 0 0 0 0 00 0 0 0 777777 7 777777777 3 7 777777777777 3 7 7 0 7 0 0 0 5 0 0 0 0 0 5 0 00 0 0 0
consensus : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--T--TACA-CTGAT-T--AAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA-GA--TGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CAGTCATCATCAGTATAATCGTTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-AN--AC-ACNGANCCNAA-ACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATGAAAAAAANT--TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCGAGNACAGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTAC--AAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTGA---A-CTT-GCGAC--TAT----CTGTTTCGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTC--CCC--GGGCCTCCGCAAT-ATTGNAAAAAAGC--AAATTGTTCCTCA-T-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAAT-G--ACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCT-C-GGCGGGTCT-CCGATTT--AAA-GCCTTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
Reference ( family-8600 ) : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--T--TACA-CTGAT-T--AAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA-GA--TGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CAGTCATCATCAGTATAATCATTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-AN--AC-ACNGAGCCNAA-ACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATGAAAAAAANT--TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCGAGNA-AGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTAC--AAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTGA---A--TT-GCGAC--TAT----CTGTTTTGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTC--CCC--GGGCCTCCGCAAT-ATTGNAAAAAAGC--AAATTGTTCCTCA-T-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAAT-G-AACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCT-C-GGCGGGTCT-CCGGTTT--AAACGCCTTTGCTTTGTTGACATTGNTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
gi|1 : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATTTAAAGGAATTTCGCTACTTTTATTGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----GAGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTATTACGCATAATATTTTTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--TATTACA-CTGAT-T--AAAAACACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATCGGTAAAAGAAATATTGTTCCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAATTATCCTATTTATTAAATCT-TGT---GAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCACTCCATTCATACATAGGTTTAATT-TCAAAGTGA-GAAATGCGTGGAAAATTACATTCTTTAGTGAGTAAATAATCAATGACTGAAGACCCGTTGTGAGATACAAAAGTGTACGCACCACTGCCGTAATCATCTCTGAGTCTACCGTTAACTATGCGTAAACGTGCCGACTTACATAAATCAAGAAGCTTGACCCCGTAGTTATTGCATTTTTTGTCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CTGTCATCATCAATACAATCGTTAACTCGGTCGTGAATAATAAAATCATTCTTAGTTCCAACTCGACTATTGAGGTCACC--TG--AC-AAGAAT-ACAGAGCCTAA-ATTTTCATAGTAATCAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACATTATTATAAACTGGTGAATCCTCTCCCCATATGTAAATGTCACATA-----TATAAACATCATTTTCAAAATGAAAAAAAGT--TACGATCGAGTTTTAACCAAATTA-TGGTGTCATGATG-ATT-TTTAACAATCTCAATACCGTCTTTCAGTTCTTCTTTATA--ATAAACTGCAATACCACCGCTACATCTTTTGGCCTTACGA-TTTTGAAATTTTCTA-TAAAA--GTTATGAAATATGTATCC-TGAAAGTTCAATGTCACTACTTGCACTTGTC-CATGTCT-CATATAAAAATATTATGTCATTTCCGGCTAGTATGTTTACAAAGTCATCACTGCTCTTCTTA--ACTGAAGACAGACCATTGACATTCCATGACAT--CACGTTCAGCTCATCCTCATCGTACCCC--TAGTCCCTCACAGCTCTGCCGTTGATAAACAAAGTATCGTATGCAATCCAGGATGTCTTGCCC-TCT-TGCCGCGCAGCCTTCATCCTCGGAACCAGCCTTCTTCTCCTCTCTACGAT---CTCCCTGGGGAATTGTTCGTTTAC--AAAATATGGAGTCCCTTGTAACGCCTTCCACTATTTACGCACCAACTCCTTCTCCTTGTAC-TCGTGA---AACTTGGCAAC--TA------TGTTTCGACACCTGCCAGAAACCTTCGAACCCACTCTATGTACCCTCTCGAATACTATCTTCTCCACTATCTCTTTTGCAATATGCATTTGTTCAATTATAAAA-TCC---CT-CAGTTTCACTTCAGCGTCCTCGTTACTCTCTACCT--GGGCCTCCGCAAT-ATTGGAAAAAAGC--AAATTGTTCCTCATT-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATT-TTTCTCTTTCTCTAAT-GAAATAACTTTGTCATTTAGAATGCCTATAGAAAAGTCAGCACTATCGGTTTTCTCCTCCACCCTATTTATCCTCTCGTCTG-----TCAACTTATTTCTGTCCTCTATAACAGTCCACAACTTCTTTAACTCCTTGTCAAACCCATCAAATTTAATTTTC--ATCTCCTCCAAAGCACCCAGTCTCTTATCCATGCTAGTTATTCTACTGTCTATCTGCTTCAAGCATGCCATAATGTCTGCATTTGTTGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCATTT--GTATCGTATAACACGGAGTTTGTTTGGTTCAAAATGTCACTCACC-----GCTACTTCACTAGCCTCC-GGCGGGCCTCCCGATTT--AAACGCC-TTGCTTTGTTGACATTGGTGACTTTCACTACCATTACTTCCACTACTCCCTCTATTCTTCCTTTTCACCTTTCCTCTCATGACTTACTAATCAAACATGGTCCAAACAATTTCTAGTCCAATTTCCAGAAGAAAAAACGCACTGGTTACAATGTAAATCATTATTTTTCATTACTTGTATCAGAGCTCCGAAATATG
gi|10 : TATCAAA--CTCCTCGTTGAAATGTTTGGTTTCGTTC---AAATCGTGCCTGTTACAAAACGTCT--------TCATAGTTTTAACAACGGAAA-ATATCTTTTTCTAAGTTAGAAAAATAATTGTAAAATTAATCAAAAGTTATT----TATTTTTCTATTTTTGATTGATTTTTTTTATTTCAAATACTTCCAAAAT--TGCTTCCGATCGGTATACAA--TGTCTTGGATTTTCTATTTCAACCAAATTT-TTAAATGTTTAAAATGTT------TTgcgtccatt
gi|11 : TATCAAGAGCTCCTTGTTGAA------GGTTTCGGTA---AAATCGT------TACA-----CCTCAAG---TTC-----TT---CAAC----A-ATATATTTGTTGAAATCGGAAAAATAATAAAAAAATTATTCTAATGAAATTTCAATAATATTGTTGCTTTAAGT-AT-GTTTTTA----AAATACTTCCAAAAT--TGCT-----TCGGTTTACAA--TGTCTAAGAATTTCTATTTCTTTC--TTTTCCTTA--ATTTAAAACGTT------TTTTCGTGCTATTC-TGATATTTCTat
gi|12 : AAAATCATGCT-----CG---TTACAAAGTGTCTTATATTTTTTATTTCAGCCAATTGT-TTAA--GTTTAAAACGTC------CTTTCTTACTACGAATAATACTTTTGTAAGCCGTTTTAA-ATTCCTAATAATATTTTCT----------------------TAAT------A--CACACAACGCATTTAAATATCGGGTTTTAGCCATAACACATTCGGCGTCGAACCATTCAGCGTCATTTGCAAAGGACAATATTGGTAAAtt
gi|13 : GGACAATATTGGTAAAATCATT------------TATTGAATCT-TGTTGTGAAACGTCAATATCGCGTGTTATCTTAATAAAAACAGGTAACTTTGCTACAAGACCTTATCTAAAA-
gi|14 : GTGTATCACG--CTCTTGGTTGGAATGTTCAGCATTGTTA---AAATCATGCTCGTTACAAAGTGTCT
gi|15 : gGTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGta
gi|16 : TAGAAAAGTCAGTACT-TCAGT
gi|17 : TGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTacataatgaaactcaccgtacaaacttttcactagtttatccg
gi|2 : ATTGTTATCAAAATCATTATCAGTACAAAAAGATTCGGCATCTTCATTTGCTGT----CTGAAATATATCATTACTTAAGCTAACAAAATAATTTCGGAATTCCTCCAATGATATGTCATTACTTCCGGCATGATTATT-CTTTTTCTTA----AAATATTTCCAAAAT--TCTT-----TAGGTTTACAA--TATTATAAATTCTCTATATCTGATAATTTT-TTTA--ATTCAAAACATCGCTTCTTTTTCTTG--ACG----GTATCTTTATA-TTCTTTTTTATATTTGCAGAAATGCTCCCTATTTAAATCTGATT--TACAACAGGTGT--ATA--TACGTAATGCTTCTAAATATCTGTTCTTGGCAATAACACAATCCTTATCAAACCATTCCGCATGTTTTACAAATGAC-TGGTCAGAAAATGTGACATAACTTTTATGTATATAACTTTTTGAGAATAAAGGATC--CGACACAGCACGAACTATATTGGTAAAATCATTCATAACATCGTTGACAGAATCTCTATT-TGAATAATCAATATTCTTTGTCAATTTATTAAAATCAGACAATTTATTTATTAAACCTGAGCGAAAACGC----TCACGAAGCAAATTATCCCATTTATACTTTA----CGTCGCGCACATCTACAGGTATAGCTGA-AGGTCTT-TTACAACACAAAGAAAATTTAATGGGTGAATGGTCACTCCATTCATTAATAGGGTCAATTGTAAAAGTACTGA--TATGTGAAAAATTACTCTCATTTGTAAGTAAATAGTCAATCACGGATTCTCCGTGCTGTGGCACAAAGGTACACACATC-----CGTATTAATACCT-ATTCTACCGTTTACTATGCGTAAACAAGACGATTTGCATAACTCAAGAAGTTTAACACCCTGACTATTACATGTTTTATCAAGCGAGGACCGGTACATTGGTATATCGGGAACATAATCAAT-ATCATCTGTATAATAATTTACCTTGTCTTGTATAATAAAATCATGTTTAGTACCAACTCTGCTATTCATATCACCCATA--AC-AT--AC-ACCGACCCGAG-ACTTTCATAAAAAACTATATCATTTTCCAGAAGTTCAAATAAATCAACATTAGCAATATTATATGCAGGGGAATCTTCCCCCCATAAATAAATTCCACATA-----CATATACATCATTATCAAAATTAAAGAA-TT--TATGATCAAGTTTAATCCAAACAA-TGGTGTCCAAGCT-ACT-TTTAACTACCTCAATACCATTTTTTAAAGATTCCTTGTAGTATAAAAC--AATACCACCACTAGATCTTTTGGCATTACGA-TGTTTAAATTTACGG-TAAAA--ATTATGTGAAACATATCCACTCAAGCT-AATATCGCTATTAGTACATGTC-CATGATT-CATATAAGAATACTATGTCATTATCAGCAATAATATTTACAAAGTCACAATTGTCTTTCTTACT-CCTAGTA-AGTACATGAACATTCCATGACAGGAAACGT--AGTTCACCCTCTGTGTAATCC--TAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGAC
gi|3 : ggtctaattcctcgaatgaacaacaAAGAGAGGCCTGGTTCATGTGAATGTCAGTTACATAA-CACTCATCATCAGTATAACCATTAACCTGGTCATGAATAGTAAATTTAGTCTTAATTCCAACTCGACTATTGAGGTCACC--AG--GCTAG--ATTACAGAACCTTA-ATTTTCATAGTAATTAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCT-ATATGTAAATACCGCATA-----TATAAACATCGTTTTCAAACTGAAAAAT-GT--TACGATCAAGTTTTAACCAAATTA-TGATGTCAAAATT-ATT-TTTAACAATCTAAATACCTTTTTTCAGTGCTTTTTGATA--ATAAAGTGCAGAACCACCGCTATATCTTCTGGCCTTACGA-TTTGAGAATTTTCTG-TAAGA--GTTATCAAATACATATCC-TGCAAGATTAATGTCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCCTTTTCAGCTAATATGCTTACACATTCATCACTGCTCTTCTTA--ATCGTGGACAGACCATTGACATTCCGTGACATAAAGATC--AGCTCACTCTCATCTTA--CCGATAGTATCTTACAGGTCTACCGTTTATGTACGAAGTGTCATAATCAATCCAGGATGTCTTGCCC-ATT-TGTCGCGCAGCCTTCATCCTTGGAACCAGCTTTCTACTCCTCTCTATAAT---CTCCCTGGGAAAGTGTTCGGTTAC--AAACTATGGAAT-CCTTGGAACGTCCCCCAATGTTAATGCACCAACTCCGTCTCCTTGTAT-GCAT-------------GAC--TA------TGTTTTGACACCTGCGAGAAATCTTCGCACCAACTCTATGTATCCTCTCGAATACTATCTTCTCTACTATCGCTTTTGCAATATGCATCCTTT--AATTTAAAACTTC---CT-CAGTTTCATCTCAGCG---GC---ACT-------T--GGGCCTTCGCAATAATGGAAAAAAAGCTGAAATTGT-----------CTGAGATTGCAAATAAACAATATCATCTTTCAGG---GCATTTTTTCTCATACGCTCAT-G-----------------A-AAT----ATAGAAAAGTCAGTACTATCAGTTC
gi|4 : aaCATTATCAGCAATAATATTTACAAAGTCACAATTGTCTTTCTTACT-CCTAGTA-AGTCCATGAACATTCCATGACAGGAAACGT--AGTTCACCCTCTGCGTAATCC--TAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGACGTGT--CCCATCTGTCCCTGGCTGCTCTCATCTTAGGTAGAAGCCTCTTCCTCTTCTCTACTAC---CTCTCGTGAAAATTGTTCATTTACATAAAATGCG--GTACCTTGTAATGTTTTTCACTGTTAACGTACGAGTTCTCTTTCTTTGAACAGCGTAA---ATTTT-GCGAC--AATCGCCCTGTT------CCTTCCCATGGCCTTCACCCCCATTCTGTGTACTCGCTCGAACCCGATATTGTCAACAATGTCCTTCGCTACCTTCATCTTCTCGTGAATAAAGCTACGTACTACAGCTT--CTGCAGCTTCCGC---ACTCTC--CCCCGAGGCTTCCGCAAT-GTTACTAAACACC--AGATTGTTTCTCA-TGGACTGCGATTGTAGGTACACAATTTCATC---CCGGATTACA-TCCCTCTCCTTCTCTAATCC-CACAACTTTATTGTTCACAATCACCATATGAAAATCTACACTTTCTGTCTTCTCCTCAACTCTCGTTAATCTCTCATCTGATTTTTTA--TTATTT---TCATCTATGATGACCCACAGCTTTTTCAGATCGCGGTCGAACCAATCAACTTT-CTTCTCTAAGCT-CTCCAGAGCACCGAGCCTCTTGTCCATGGCACATATTTTATTGTCAATTTTCTTAAGATATGACATTAAGTCCGCATTTGTCGGTTC
gi|4 : TCGTTTCAGCATCAAATAAAACAGAGTTGGTTTGGCTCAAAATTTCACTCACCGGAATGTTA--TCAGTATCCT-CAGACGGGTCT-CTGGTTTCGAAAAG--TTTG--TTGTT----TTGTT---CTTCACTATCAtatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttcttcgtttcagcatcaaataaaacagagttggtttggctcaaaatttcactcaccggaatgttatcagtatcctcagacgggtctctggtttcgaaaagtttgttgttttgttcttcactatcacaa
gi|5 : cattatcagcaataatatttacaaagtcacaattgtctttcttactcctagtaagtccatgaacattccatgacaggaaacgtagttcaccctctgcgtaatcctagtccctcactggcctaccgttgatatatagggtgtcgtaagcaatccacgacgtgtcccatctgtccctggctgctctcatcttaggtagaagcctcttcctcttctctactacctctcgtgaaaattgttcatttacataaaatgcggtaccttgtaatgtttttcactgttaacgtacgagttctctttctttgaacagcgtaaattttgcgacaatcgccctgttccttcccatggccttcacccccattctgtgtactcgctcgaacccgatattgtcaacaatgtccttcgctaccttcatcttctcgtgaataaagctacgtactacagcttctgcagcttccgcactctcccccgaggcttccgcaatgttactaaacaccagattgtttctcatggactgcgattgtaggtacacaatttcatcccggattacatccctctccttctctaatcccacaactttattgttcacaatcaccatatgaaaatctacactttctgtcttctcctcaactctcgttaatctctcatctgattttttattattttcatctatgatgacccacagctttttcagatcgcggtcgaaccaatcaactttcttctctaagctctccagagcaccgagcctcttgtccatggcacatattttattgtcaattttcttaagatatgacattaagtccgcatttgtcggttctatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttctATTAACACTGATTTGTATAATAAAATGTTTATTA---CCAACTGTGTTATTTAT-TCACC--TGTAAC-AC--AC-ACCGA-CCAAACACTTTCTTAATTATATTTATCATTTT--------TCAGA-------ATATTAA------TACAGGG-GGT-ATTCCCCTCCCTATAAATAAATTCCACACA-----CATA--CATCATTTTCAAAATTATAGAA-TT--TGTGATCAAGCTTAATCCAAAATAATAGTATTTATATGTATT-TCTACTAA-CTCAATATCGTTTT------------------A-AAAG---AAT-CCATCACTAGATCGTTTGGCATTACGA-TGTTTAAATTTGCTG-TAAATTTGTT-TGTAATATATCTAC-TGAAAAT--AATATCACAAATAGGACTTGCCTCA-GTTTGTATAGAAAAATACAATATCATTTCCAGAAAAAATATTTAC----TCAACACAATTCATCTTACTACTG-GCA-AGTCCATGAAAGTGTCGTGACAGGAAGCGT--AGTTCGCCGGCTACGTAATTC--TAGCCCCTCACAGGACTGCCGTTAATGCATCATTTGTCGTAAGTAAGCCAAGCTGGCTTGGCC-TCC-TACCATGCCGCCTTCATCTTTGAGAGTAACTTACGCCCCTTCTTTTCGATTACCTCCCTTGGAAATTGTTCATGAAC--AGAATACAGTGTGCTGTCTGACGTCTTCCATTGTTTTCGTACATATTACTCGTCTTTAAAC-AAA-GATATA--TA-GCCACTATAT----TTGTTTTT---TCTGCCTTATGTCTTTGCACTCATTTAATGAATCTTTTCAAACGATATCTTATCCAcaa
gi|6 : tacaGTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATTTAAAGGAATTTCGCTACTTTTATTGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----GTGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTATTACGCATAATATTTGTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTGTAT--TACA-CTGAT-TAAAAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATTGGTAAAAGAAATATTGTTTCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAATTATCCTATTTATTGAATC----TTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCA
gi|7 : ATATTGCTCCTATGCATGTGACATTCAGAAAAAAGTAGGTCAGCCACAT--AGCGGACAATATTGCTA--CTCATTTAGTAGCCCATT-ATTCAATCT-TGTTGTGAAACTTCAATATTGCGTGTTAACTGATTAAAA-CAAGTAACTTTGCTAC---------TCTAAAA-TTATTTTCATGAAT---ACCGTTTCACTTA-AATTTGACTTTGTCTC---CGTCTTCAAGTACA--CGATACCTTTTATTACAGT-TAACGAAAAGCTGATTAGTGAGTGGTCACTCAATTTGTACATAGGTTAAATT-TTGAAGTGA--------GTAG-----TACATACTTTAGTTAGTAAATACTCAATAACAGAACCCTCTTTGTGAAATAC-CAAGTGCAAACACCGCTGCGGCAATCGTTTCTGACTCTATCGTTGGCTATGCGT------GTCAACTT--ATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAAA--TTCGTTTCATGTGATCGTCAGGAACAGAA-TAGTCATCA
gi|8 : TTTCAAGCAATTCAAACAGATCAACAATAATAGTATTGTAAACTGTTGAATTCTCACCC-ATAAGTAAAAACTGCATAATTTATATAAACATCATTATCAAAATGAAAAAGAATAATACGATCGAGTGCCCACCAATTTA-TTGTGTCGTAATG-ATTCTTTTACACTTACAATAC-GTTT--CAATGTTTCTTTATA--ATAAAGCGCAATACCAACGCTACATCTTTTGGCATTACGCTTTTTTGAATTTTCTATTAAAA----CATGAGATACATATCC-CGAAAGTTCAATACCACTTCTTGCACATGTC-CACGTTT-TATA-AAAAATATAATATTACTTCCAGAAAGAACG-TAACAAAGCCATTACTGCTCatgtgc
gi|9 : TAGAAAAGTCAGTACTATCAGTTCTgtactaatcgcggatatacaattgaca
gi|9 : GTTCTAAATGTCACTCACCG-----CCACTTCACTA------------GTTT-CCGAT--------GCCTT-GCTTTGTTGACATTGTTGACTTTCACTACCATTACTACCCTTATTCCTTCCATTCTTCATTTTAGTCTTTCCTGTCATGACTTATTAATTAAATATATTTCAAACGATTTCTAGTACAATTACCAGTAG-AAAAACGCACTGATTACAATGTAAATCATTATTGTTGTTTATATTTATCAGAGCTCCGAATTATGaaatgtcactcaccgccacttcactagtttccgatgccttgctttgttgacattgttgactttcactaccattactacccttattccttccattcttcattttagtctttcctgtcatgacttattaattaaatatatttcaaacgatttctagtacaattaccagtagaaaaacgcactgattacaatgtaaatcattattgttgtttatatttatcagagctccgaattatgaaaaccat
Alignments
lowQualScore : 111 111 111 1111 1111111 111111 11 1 1111111 444444444444444444444444 1 11 111 1 111 11 1 44444444 1 333333 1 1 1111111111111 1 1 22222 22222 11 11 111 22222222222 11 11 1 1 111 11 1 8888888888888888888888888888888 222222 1111 222 1 222 3333333333 1 11 333333333 222 1 88888888888888888888888888888 22222 11 222 11 11 1 11 444444 555555555 1 4444444444444 1
lowQualScore : 99 000 0 444 0 111 111 5 8 1 1 1 22 0 44 1 4 1 8 11 7777 99 9999999 99 0 6 99 999999 6 00 3 1 0 0 0000000 111111111111111111111111 0 1 0 1 0 0 3 4 33 1 0 1 8 11 3 1 5 88 55 1 1 3 3 6 0 777 0 4444 777 33 8 0 3 3 1 2 0 1 3 44 33333333 7 1 1 1 3 1 7 0 2 0 1 6 1 1 444444 1 2 2 0 0 0 2 0 0 2 1 1 0 0 777 1 1 77 9999999999999 0 1 1 1 0 11 1 0 1 3 1 3 4 6 1 3 1 1 00000 6 1 33333 1 1 8 77 8 8 3 66 5555 0 11 0 11 0 1 0 8 0 1 1 8 444 0 1 8 0 99 1 1 8 3 8 5 1 1 1 11 22222222222 1 3 11 22 5 11 1 1 1 1 3 0 0 0 00 1 4 1 11 1 0 0 777 1 33 66 0 0 1 1 0 0 1 2222222222222222222222222222222 444444 11 1 0 1 0 0 1111 6 1 333 3 6 7 333 8888888888 3 1 88 111111111 7 333 7 2 1 88888888888888888888888888888 6 1 22 1 77777 88 000 1 1 1 2 1 1 66 88 1 5 1 1 22 1 1 1 1 1 1 88 1 1 1 111111 6 777777777 3 2222222222222 7 6 6 6 1 1 1 2 1 1 1 1 1 5 1 22 1 1 1
lowQualScore : .. ... . ... . ... ... . . . . . .. . .. . . . . .. .... .. ....... .. . . .. ...... . .. . . . . ....... ........................ . . . . . . . . .. . . . . .. . . . .. .. . . . . . . ... . .... ... .. . . . . . . . . . .. ........ . . . . . . . . . . . . . . ...... . . . . . . . . . . . . . . ... . . .. ............. . . . . . .. . . . . . . . . . . . . ..... . . ..... . . . .. . . . .. .... . .. . .. . . . . . . . . ... . . . . .. . . . . . . . . . .. ........... . . .. .. . .. . . . . . . . . .. . . . .. . . . ... . .. .. . . . . . . . ............................... ...... .. . . . . . .... . . ... . . . ... .......... . . .. ......... . ... . . . ............................. . . .. . ..... .. ... . . . . . . .. .. . . . . .. . . . . . . .. . . . ...... . ......... . ............. . . . . . . . . . . . . . . . .. . . .
lowQualScore : 22 000 7 000 8 666 666 6 0 0 0 4 88 8 66 4 6 0 0 88 0000 22 2222222 22 3 7 22 222222 4 66 2 0 2 0 2222222 222222222222222222222222 8 2 0 0 2 2 2 2 88 0 8 0 8 66 6 4 6 88 88 4 4 5 5 7 8 555 0 5555 555 88 8 8 2 2 0 5 7 0 3 33 77777777 3 0 0 0 7 0 3 7 0 7 0 7 0 0 000000 0 0 5 2 0 2 5 7 2 5 0 0 2 2 000 0 0 55 5555555555555 0 0 0 0 8 22 0 6 4 2 4 2 0 0 4 2 4 0 00000 0 4 44444 0 4 0 88 0 0 8 44 6666 6 00 8 44 8 0 6 0 6 0 0 0 222 8 4 0 6 00 4 4 0 8 0 6 4 0 7 33 00000000000 4 2 00 44 6 00 4 4 4 0 2 0 0 2 55 0 2 2 22 2 2 2 555 0 88 00 8 2 0 0 8 2 0 2222222222222222222222222222222 888888 22 2 8 0 2 7 0000 7 0 333 3 7 3 333 0000000000 3 0 33 333333333 3 333 3 0 0 77777777777777777777777777777 0 0 00 0 55555 00 555 0 0 0 5 0 0 55 55 0 0 0 0 00 0 0 0 0 0 0 00 0 0 0 777777 7 777777777 3 3333333333333 3 7 7 7 0 0 0 5 0 0 0 0 0 5 0 00 0 0 0
consensus : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--T--TACA-CTGAT-T--AAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA-GA--TGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CAGTCATCATCAGTATAATCGTTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-AN--AC-ACNGANCCNAAACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATGAAAAAAANT--TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCGAGNACAGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTAC--AAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTG-A-A-T-TT-GCGAC--TAT----CTGTTTCGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTC--CCC--GGGCCTCCGCAAT-ATTGNAAAAAAGC--AAATTGTTCCTCA-T-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAAT--G--ACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCT-C-GGCGGGTCT-CCGATTT---AAA-GCCTTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
Reference ( family-8600 ) : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--T--TACA-CTGAT-T--AAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA-GA--TGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CAGTCATCATCAGTATAATCGTTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-AN--AC-ACNGANCCNAAACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATGAAAAAAANT--TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCGAGNACAGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTAC--AAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTG-A-A-C-TT-GCGAC--TAT----CTGTTTCGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTC--CCC--GGGCCTCCGCAAT-ATTGNAAAAAAGC--AAATTGTTCCTCA-T-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAAT--G--ACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCT-C-GGCGGGTCT-CCGATTT---AAA-GCCTTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
gi|1 : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATTTAAAGGAATTTCGCTACTTTTATTGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----GAGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTATTACGCATAATATTTTTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--TATTACA-CTGAT-T--AAAAACACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATCGGTAAAAGAAATATTGTTCCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAATTATCCTATTTATTAAATCT-TGT---GAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCACTCCATTCATACATAGGTTTAATT-TCAAAGTGA-GAAATGCGTGGAAAATTACATTCTTTAGTGAGTAAATAATCAATGACTGAAGACCCGTTGTGAGATACAAAAGTGTACGCACCACTGCCGTAATCATCTCTGAGTCTACCGTTAACTATGCGTAAACGTGCCGACTTACATAAATCAAGAAGCTTGACCCCGTAGTTATTGCATTTTTTGTCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CTGTCATCATCAATACAATCGTTAACTCGGTCGTGAATAATAAAATCATTCTTAGTTCCAACTCGACTATTGAGGTCACC--TG--AC-AAGAAT-ACAGAGCCTAAATTTTCATAGTAATCAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACATTATTATAAACTGGTGAATCCTCTCCCCATATGTAAATGTCACATA-----TATAAACATCATTTTCAAAATGAAAAAAAGT--TACGATCGAGTTTTAACCAAATTA-TGGTGTCATGATG-ATT-TTTAACAATCTCAATACCGTCTTTCAGTTCTTCTTTATA--ATAAACTGCAATACCACCGCTACATCTTTTGGCCTTACGA-TTTTGAAATTTTCTA-TAAAA--GTTATGAAATATGTATCC-TGAAAGTTCAATGTCACTACTTGCACTTGTC-CATGTCT-CATATAAAAATATTATGTCATTTCCGGCTAGTATGTTTACAAAGTCATCACTGCTCTTCTTA--ACTGAAGACAGACCATTGACATTCCATGACAT--CACGTTCAGCTCATCCTCATCGTACCCC--TAGTCCCTCACAGCTCTGCCGTTGATAAACAAAGTATCGTATGCAATCCAGGATGTCTTGCCC-TCT-TGCCGCGCAGCCTTCATCCTCGGAACCAGCCTTCTTCTCCTCTCTACGAT---CTCCCTGGGGAATTGTTCGTTTAC--AAAATATGGAGTCCCTTGTAACGCCTTCCACTATTTACGCACCAACTCCTTCTCCTTGTAC-TCGTGAA-A-C-TTGGCAAC--TA------TGTTTCGACACCTGCCAGAAACCTTCGAACCCACTCTATGTACCCTCTCGAATACTATCTTCTCCACTATCTCTTTTGCAATATGCATTTGTTCAATTATAAAA-TCC---CT-CAGTTTCACTTCAGCGTCCTCGTTACTCTCTACCT--GGGCCTCCGCAAT-ATTGGAAAAAAGC--AAATTGTTCCTCATT-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATT-TTTCTCTTTCTCTAAT--GAAATAACTTTGTCATTTAGAATGCCTATAGAAAAGTCAGCACTATCGGTTTTCTCCTCCACCCTATTTATCCTCTCGTCTG-----TCAACTTATTTCTGTCCTCTATAACAGTCCACAACTTCTTTAACTCCTTGTCAAACCCATCAAATTTAATTTTC--ATCTCCTCCAAAGCACCCAGTCTCTTATCCATGCTAGTTATTCTACTGTCTATCTGCTTCAAGCATGCCATAATGTCTGCATTTGTTGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCATTT--GTATCGTATAACACGGAGTTTGTTTGGTTCAAAATGTCACTCACC-----GCTACTTCACTAGCCTCC-GGCGGGCCTCCCGATTT---AAACGCC-TTGCTTTGTTGACATTGGTGACTTTCACTACCATTACTTCCACTACTCCCTCTATTCTTCCTTTTCACCTTTCCTCTCATGACTTACTAATCAAACATGGTCCAAACAATTTCTAGTCCAATTTCCAGAAGAAAAAACGCACTGGTTACAATGTAAATCATTATTTTTCATTACTTGTATCAGAGCTCCGAAATATG
gi|10 : TATCAAA--CTCCTCGTTGAAATGTTTGGTTTCGTTC---AAATCGTGCCTGTTACAAAACGTCT--------TCATAGTTTTAACAACGGAAA-ATATCTTTTTCTAAGTTAGAAAAATAATTGTAAAATTAATCAAAAGTTATT----TATTTTTCTATTTTTGATTGATTTTTTTTATTTCAAATACTTCCAAAAT--TGCTTCCGATCGGTATACAA--TGTCTTGGATTTTCTATTTCAACCAAATTT-TTAAATGTTTAAAATGTT------TTgcgtccatt
gi|11 : TATCAAGAGCTCCTTGTTGAA------GGTTTCGGTA---AAATCGT------TACA-----CCTCAAG---TTC-----TT---CAAC----A-ATATATTTGTTGAAATCGGAAAAATAATAAAAAAATTATTCTAATGAAATTTCAATAATATTGTTGCTTTAAGT-AT-GTTTTTA----AAATACTTCCAAAAT--TGCT-----TCGGTTTACAA--TGTCTAAGAATTTCTATTTCTTTC--TTTTCCTTA--ATTTAAAACGTT------TTTTCGTGCTATTC-TGATATTTCTat
gi|12 : AAAATCATGCT-----CG---TTACAAAGTGTCTTATATTTTTTATTTCAGCCAATTGT-TTAA--GTTTAAAACGTC------CTTTCTTACTACGAATAATACTTTTGTAAGCCGTTTTAA-ATTCCTAATAATATTTTCT----------------------TAAT------A--CACACAACGCATTTAAATATCGGGTTTTAGCCATAACACATTCGGCGTCGAACCATTCAGCGTCATTTGCAAAGGACAATATTGGTAAAtt
gi|13 : GGACAATATTGGTAAAATCATT------------TATTGAATCT-TGTTGTGAAACGTCAATATCGCGTGTTATCTTAATAAAAACAGGTAACTTTGCTACAAGACCTTATCTAAAA-
gi|14 : GTGTATCACG--CTCTTGGTTGGAATGTTCAGCATTGTTA---AAATCATGCTCGTTACAAAGTGTCT
gi|15 : gGTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGta
gi|16 : TAGAAAAGTCAGTACT-TCAGT
gi|17 : TGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTacataatgaaactcaccgtacaaacttttcactagtttatccg
gi|2 : ATTGTTATCAAAATCATTATCAGTACAAAAAGATTCGGCATCTTCATTTGCTGT----CTGAAATATATCATTACTTAAGCTAACAAAATAATTTCGGAATTCCTCCAATGATATGTCATTACTTCCGGCATGATTATT-CTTTTTCTTA----AAATATTTCCAAAAT--TCTT-----TAGGTTTACAA--TATTATAAATTCTCTATATCTGATAATTTT-TTTA--ATTCAAAACATCGCTTCTTTTTCTTG--ACG----GTATCTTTATA-TTCTTTTTTATATTTGCAGAAATGCTCCCTATTTAAATCTGATT--TACAACAGGTGT--ATA--TACGTAATGCTTCTAAATATCTGTTCTTGGCAATAACACAATCCTTATCAAACCATTCCGCATGTTTTACAAATGAC-TGGTCAGAAAATGTGACATAACTTTTATGTATATAACTTTTTGAGAATAAAGGATC--CGACACAGCACGAACTATATTGGTAAAATCATTCATAACATCGTTGACAGAATCTCTATT-TGAATAATCAATATTCTTTGTCAATTTATTAAAATCAGACAATTTATTTATTAAACCTGAGCGAAAACGC----TCACGAAGCAAATTATCCCATTTATACTTTA----CGTCGCGCACATCTACAGGTATAGCTGA-AGGTCTT-TTACAACACAAAGAAAATTTAATGGGTGAATGGTCACTCCATTCATTAATAGGGTCAATTGTAAAAGTACTGA--TATGTGAAAAATTACTCTCATTTGTAAGTAAATAGTCAATCACGGATTCTCCGTGCTGTGGCACAAAGGTACACACATC-----CGTATTAATACCT-ATTCTACCGTTTACTATGCGTAAACAAGACGATTTGCATAACTCAAGAAGTTTAACACCCTGACTATTACATGTTTTATCAAGCGAGGACCGGTACATTGGTATATCGGGAACATAATCAAT-ATCATCTGTATAATAATTTACCTTGTCTTGTATAATAAAATCATGTTTAGTACCAACTCTGCTATTCATATCACCCATA--AC-AT--AC-ACCGACCCGAGACTTTCATAAAAAACTATATCATTTTCCAGAAGTTCAAATAAATCAACATTAGCAATATTATATGCAGGGGAATCTTCCCCCCATAAATAAATTCCACATA-----CATATACATCATTATCAAAATTAAAGAA-TT--TATGATCAAGTTTAATCCAAACAA-TGGTGTCCAAGCT-ACT-TTTAACTACCTCAATACCATTTTTTAAAGATTCCTTGTAGTATAAAAC--AATACCACCACTAGATCTTTTGGCATTACGA-TGTTTAAATTTACGG-TAAAA--ATTATGTGAAACATATCCACTCAAGCT-AATATCGCTATTAGTACATGTC-CATGATT-CATATAAGAATACTATGTCATTATCAGCAATAATATTTACAAAGTCACAATTGTCTTTCTTACT-CCTAGTA-AGTACATGAACATTCCATGACAGGAAACGT--AGTTCACCCTCTGTGTAATCC--TAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGAC
gi|3 : ggtctaattcctcgaatgaacaacaAAGAGAGGCCTGGTTCATGTGAATGTCAGTTACATAA-CACTCATCATCAGTATAACCATTAACCTGGTCATGAATAGTAAATTTAGTCTTAATTCCAACTCGACTATTGAGGTCACC--AG--GCTAG--ATTACAGAACCTTAATTTTCATAGTAATTAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCT-ATATGTAAATACCGCATA-----TATAAACATCGTTTTCAAACTGAAAAAT-GT--TACGATCAAGTTTTAACCAAATTA-TGATGTCAAAATT-ATT-TTTAACAATCTAAATACCTTTTTTCAGTGCTTTTTGATA--ATAAAGTGCAGAACCACCGCTATATCTTCTGGCCTTACGA-TTTGAGAATTTTCTG-TAAGA--GTTATCAAATACATATCC-TGCAAGATTAATGTCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCCTTTTCAGCTAATATGCTTACACATTCATCACTGCTCTTCTTA--ATCGTGGACAGACCATTGACATTCCGTGACATAAAGATC--AGCTCACTCTCATCTTA--CCGATAGTATCTTACAGGTCTACCGTTTATGTACGAAGTGTCATAATCAATCCAGGATGTCTTGCCC-ATT-TGTCGCGCAGCCTTCATCCTTGGAACCAGCTTTCTACTCCTCTCTATAAT---CTCCCTGGGAAAGTGTTCGGTTAC--AAACTATGGAAT-CCTTGGAACGTCCCCCAATGTTAATGCACCAACTCCGTCTCCTTGTAT-GCAT-------------GAC--TA------TGTTTTGACACCTGCGAGAAATCTTCGCACCAACTCTATGTATCCTCTCGAATACTATCTTCTCTACTATCGCTTTTGCAATATGCATCCTTT--AATTTAAAACTTC---CT-CAGTTTCATCTCAGCG---GC---ACT-------T--GGGCCTTCGCAATAATGGAAAAAAAGCTGAAATTGT-----------CTGAGATTGCAAATAAACAATATCATCTTTCAGG---GCATTTTTTCTCATACGCTCAT--G-----------------A-AAT----ATAGAAAAGTCAGTACTATCAGTTC
gi|4 : aaCATTATCAGCAATAATATTTACAAAGTCACAATTGTCTTTCTTACT-CCTAGTA-AGTCCATGAACATTCCATGACAGGAAACGT--AGTTCACCCTCTGCGTAATCC--TAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGACGTGT--CCCATCTGTCCCTGGCTGCTCTCATCTTAGGTAGAAGCCTCTTCCTCTTCTCTACTAC---CTCTCGTGAAAATTGTTCATTTACATAAAATGCG--GTACCTTGTAATGTTTTTCACTGTTAACGTACGAGTTCTCTTTCTTTGAACAGCGTA-A-ATT-TT-GCGAC--AATCGCCCTGTT------CCTTCCCATGGCCTTCACCCCCATTCTGTGTACTCGCTCGAACCCGATATTGTCAACAATGTCCTTCGCTACCTTCATCTTCTCGTGAATAAAGCTACGTACTACAGCTT--CTGCAGCTTCCGC---ACTCTC--CCCCGAGGCTTCCGCAAT-GTTACTAAACACC--AGATTGTTTCTCA-TGGACTGCGATTGTAGGTACACAATTTCATC---CCGGATTACA-TCCCTCTCCTTCTCTAATCCC--ACAACTTTATTGTTCACAATCACCATATGAAAATCTACACTTTCTGTCTTCTCCTCAACTCTCGTTAATCTCTCATCTGATTTTTTA--TTATTT---TCATCTATGATGACCCACAGCTTTTTCAGATCGCGGTCGAACCAATCAACTTT-CTTCTCTAAGCT-CTCCAGAGCACCGAGCCTCTTGTCCATGGCACATATTTTATTGTCAATTTTCTTAAGATATGACATTAAGTCCGCATTTGTCGGTTC
gi|4 : TCGTTTCAGCATCAAATAAAACAGAGTTGGTTTGGCTCAAAATTTCACTCACCGGAATGTTA--TCAGTATCCT-CAGACGGGTCT-CTGGTTTCGAAAA-G--TTTG--TTGTT----TTGTT---CTTCACTATCAtatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttcttcgtttcagcatcaaataaaacagagttggtttggctcaaaatttcactcaccggaatgttatcagtatcctcagacgggtctctggtttcgaaaagtttgttgttttgttcttcactatcacaa
gi|5 : cattatcagcaataatatttacaaagtcacaattgtctttcttactcctagtaagtccatgaacattccatgacaggaaacgtagttcaccctctgcgtaatcctagtccctcactggcctaccgttgatatatagggtgtcgtaagcaatccacgacgtgtcccatctgtccctggctgctctcatcttaggtagaagcctcttcctcttctctactacctctcgtgaaaattgttcatttacataaaatgcggtaccttgtaatgtttttcactgttaacgtacgagttctctttctttgaacagcgtaaattttgcgacaatcgccctgttccttcccatggccttcacccccattctgtgtactcgctcgaacccgatattgtcaacaatgtccttcgctaccttcatcttctcgtgaataaagctacgtactacagcttctgcagcttccgcactctcccccgaggcttccgcaatgttactaaacaccagattgtttctcatggactgcgattgtaggtacacaatttcatcccggattacatccctctccttctctaatcccacaactttattgttcacaatcaccatatgaaaatctacactttctgtcttctcctcaactctcgttaatctctcatctgattttttattattttcatctatgatgacccacagctttttcagatcgcggtcgaaccaatcaactttcttctctaagctctccagagcaccgagcctcttgtccatggcacatattttattgtcaattttcttaagatatgacattaagtccgcatttgtcggttctatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttctTTAACACTGATTTGTATAATAAAATGTTTATTA---CCAACTGTGTTATTTAT-TCACC--TGTAAC-AC--AC-ACCGACCAAACACTTTCTTAATTATATTTATCATTTT--------TCAGA-------ATATTAA------TACAGGG-GGT-ATTCCCCTCCCTATAAATAAATTCCACACA-----CATA--CATCATTTTCAAAATTATAGAA-TT--TGTGATCAAGCTTAATCCAAAATAATAGTATTTATATGTATT-TCTACTAA-CTCAATATCGTTTT------------------A-AAAG---AAT-CCATCACTAGATCGTTTGGCATTACGA-TGTTTAAATTTGCTG-TAAATTTGTT-TGTAATATATCTAC-TGAAAAT--AATATCACAAATAGGACTTGCCTCA-GTTTGTATAGAAAAATACAATATCATTTCCAGAAAAAATATTTAC----TCAACACAATTCATCTTACTACTG-GCA-AGTCCATGAAAGTGTCGTGACAGGAAGCGT--AGTTCGCCGGCTACGTAATTC--TAGCCCCTCACAGGACTGCCGTTAATGCATCATTTGTCGTAAGTAAGCCAAGCTGGCTTGGCC-TCC-TACCATGCCGCCTTCATCTTTGAGAGTAACTTACGCCCCTTCTTTTCGATTACCTCCCTTGGAAATTGTTCATGAAC--AGAATACAGTGTGCTGTCTGACGTCTTCCATTGTTTTCGTACATATTACTCGTCTTTAAAC-AAA-G-ATA-TATA-GCCACTATAT----TTGTTTTT---TCTGCCTTATGTCTTTGCACTCATTTAATGAATCTTTTCAAACGATATCTTATCCAcaa
gi|6 : tacaaGTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATTTAAAGGAATTTCGCTACTTTTATTGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----GTGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTATTACGCATAATATTTGTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTGTAT--TACA-CTGAT-TAAAAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATTGGTAAAAGAAATATTGTTTCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAATTATCCTATTTATTGAATC----TTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCA
gi|7 : ATATTGCTCCTATGCATGTGACATTCAGAAAAAAGTAGGTCAGCCACAT--AGCGGACAATATTGCTA--CTCATTTAGTAGCCCATT-ATTCAATCT-TGTTGTGAAACTTCAATATTGCGTGTTAACTGATTAAAA-CAAGTAACTTTGCTAC---------TCTAAAA-TTATTTTCATGAAT---ACCGTTTCACTTA-AATTTGACTTTGTCTC---CGTCTTCAAGTACA--CGATACCTTTTATTACAGT-TAACGAAAAGCTGATTAGTGAGTGGTCACTCAATTTGTACATAGGTTAAATT-TTGAAGTGA--------GTAG-----TACATACTTTAGTTAGTAAATACTCAATAACAGAACCCTCTTTGTGAAATAC-CAAGTGCAAACACCGCTGCGGCAATCGTTTCTGACTCTATCGTTGGCTATGCGT------GTCAACTT--ATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAAA--TTCGTTTCATGTGATCGTCAGGAACAGAA-TAGTCATCA
gi|8 : TTTCAAGCAATTCAAACAGATCAACAATAATAGTATTGTAAACTGTTGAATTCTCACCC-ATAAGTAAAAACTGCATAATTTATATAAACATCATTATCAAAATGAAAAAGAATAATACGATCGAGTGCCCACCAATTTA-TTGTGTCGTAATG-ATTCTTTTACACTTACAATAC-GTTT--CAATGTTTCTTTATA--ATAAAGCGCAATACCAACGCTACATCTTTTGGCATTACGCTTTTTTGAATTTTCTATTAAAA----CATGAGATACATATCC-CGAAAGTTCAATACCACTTCTTGCACATGTC-CACGTTT-TATA-AAAAATATAATATTACTTCCAGAAAGAACG-TAACAAAGCCATTACTGCTCatgtgc
gi|9 : TAGAAAAGTCAGTACTATCAGTTCTgtactaatcgcggatatacaattgaca
gi|9 : GTTCTAAATGTCACTCACCG-----CCACTTCACTA------------GTTT-CCGAT---------GCCTT-GCTTTGTTGACATTGTTGACTTTCACTACCATTACTACCCTTATTCCTTCCATTCTTCATTTTAGTCTTTCCTGTCATGACTTATTAATTAAATATATTTCAAACGATTTCTAGTACAATTACCAGTAG-AAAAACGCACTGATTACAATGTAAATCATTATTGTTGTTTATATTTATCAGAGCTCCGAATTATGaaatgtcactcaccgccacttcactagtttccgatgccttgctttgttgacattgttgactttcactaccattactacccttattccttccattcttcattttagtctttcctgtcatgacttattaattaaatatatttcaaacgatttctagtacaattaccagtagaaaaacgcactgattacaatgtaaatcattattgttgtttatatttatcagagctccgaattatgaaaaccat
Alignments
lowQualScore : 111 111 111 1111 1111111 111111 11 1 1111111 444444444444444444444444 1 11 111 1 111 11 1 44444444 1 333333 1 1 1111111111111 1 1 22222 22222 11 11 111 22222222222 11 11 1 1 111 11 1 777777777777777777777777777777 222222 1111 222 1 222 3333333333 1 11 333333333 222 1 88888888888888888888888888888 22222 11 222 11 11 1 11 444444 555555555 1 4444444444444 1
lowQualScore : 99 000 0 444 0 111 111 5 8 1 1 1 22 0 44 1 4 1 8 11 7777 99 9999999 99 0 6 99 999999 6 00 3 1 0 0 0000000 111111111111111111111111 0 1 0 1 0 0 3 4 33 1 0 1 8 11 3 1 5 88 55 1 1 3 3 6 0 777 0 4444 777 33 8 0 3 3 1 2 0 1 3 44 33333333 7 1 1 1 3 1 7 0 2 0 1 6 1 1 444444 1 2 2 0 0 0 2 0 0 2 1 1 0 0 777 1 1 77 9999999999999 0 1 1 1 0 11 1 0 1 3 1 3 4 6 1 3 1 1 00000 6 1 33333 1 1 8 77 8 8 3 66 5555 0 11 0 11 0 1 0 8 0 1 1 8 444 0 1 8 0 99 1 1 8 3 8 5 1 1 1 11 22222222222 1 3 11 22 5 11 1 1 1 1 3 0 0 0 00 1 4 1 11 1 0 0 777 1 33 66 0 0 1 1 0 0 1 444444444444444444444444444444 444444 11 1 0 1 0 0 1111 6 1 333 3 6 7 333 8888888888 3 1 88 111111111 7 333 7 2 1 88888888888888888888888888888 6 1 22 1 77777 88 000 1 1 1 2 1 1 66 88 1 5 1 1 22 1 1 1 1 1 1 88 1 1 1 111111 6 777777777 3 2222222222222 7 6 6 6 1 1 1 2 1 1 1 1 1 5 1 22 1 1 1
lowQualScore : .. ... . ... . ... ... . . . . . .. . .. . . . . .. .... .. ....... .. . . .. ...... . .. . . . . ....... ........................ . . . . . . . . .. . . . . .. . . . .. .. . . . . . . ... . .... ... .. . . . . . . . . . .. ........ . . . . . . . . . . . . . . ...... . . . . . . . . . . . . . . ... . . .. ............. . . . . . .. . . . . . . . . . . . . ..... . . ..... . . . .. . . . .. .... . .. . .. . . . . . . . . ... . . . . .. . . . . . . . . . .. ........... . . .. .. . .. . . . . . . . . .. . . . .. . . . ... . .. .. . . . . . . . .............................. ...... .. . . . . . .... . . ... . . . ... .......... . . .. ......... . ... . . . ............................. . . .. . ..... .. ... . . . . . . .. .. . . . . .. . . . . . . .. . . . ...... . ......... . ............. . . . . . . . . . . . . . . . .. . . .
lowQualScore : 22 000 7 000 8 666 666 6 0 0 0 4 88 8 66 4 6 0 0 88 0000 22 2222222 22 3 7 22 222222 4 66 2 0 2 0 2222222 222222222222222222222222 8 2 0 0 2 2 2 2 88 0 8 0 8 66 6 4 6 88 88 4 4 5 5 7 8 555 0 5555 555 88 8 8 2 2 0 5 7 0 3 33 77777777 3 0 0 0 7 0 3 7 0 7 0 7 0 0 000000 0 0 5 2 0 2 5 7 2 5 0 0 2 2 000 0 0 55 5555555555555 0 0 0 0 8 22 0 6 4 2 4 2 0 0 4 2 4 0 00000 0 4 44444 0 4 0 88 0 0 8 44 6666 6 00 8 44 8 0 6 0 6 0 0 0 222 8 4 0 6 00 4 4 0 8 0 6 4 0 7 33 00000000000 4 2 00 44 6 00 4 4 4 0 2 0 0 2 55 0 2 2 22 2 2 2 555 0 88 00 8 2 0 0 8 2 0 888888888888888888888888888888 888888 22 2 8 0 2 7 0000 7 0 333 3 7 3 333 0000000000 3 0 33 333333333 3 333 3 0 0 77777777777777777777777777777 0 0 00 0 55555 00 555 0 0 0 5 0 0 55 55 0 0 0 0 00 0 0 0 0 0 0 00 0 0 0 777777 7 777777777 3 3333333333333 3 7 7 7 0 0 0 5 0 0 0 0 0 5 0 00 0 0 0
consensus : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--T--TACA-CTGAT-T--AAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA-GA--TGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CAGTCATCATCAGTATAATCGTTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-AN--AC-ACNGANCCNAAACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATGAAAAAAANT--TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCGAGNACAGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTAC--AAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTGA-A--T-TNGCGAC--TAT----CTGTTTCGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTC--CCC--GGGCCTCCGCAAT-ATTGNAAAAAAGC--AAATTGTTCCTCA-T-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAAT--G--ACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCT-C-GGCGGGTCT-CCGATTT---AAA-GCCTTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
Reference ( family-8600 ) : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--T--TACA-CTGAT-T--AAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA-GA--TGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CAGTCATCATCAGTATAATCGTTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-AN--AC-ACNGANCCNAAACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATGAAAAAAANT--TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCGAGNACAGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTAC--AAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTGA-A--T-TTGCGAC--TAT----CTGTTTCGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTC--CCC--GGGCCTCCGCAAT-ATTGNAAAAAAGC--AAATTGTTCCTCA-T-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAAT--G--ACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCT-C-GGCGGGTCT-CCGATTT---AAA-GCCTTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
gi|1 : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATTTAAAGGAATTTCGCTACTTTTATTGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----GAGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTATTACGCATAATATTTTTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--TATTACA-CTGAT-T--AAAAACACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATCGGTAAAAGAAATATTGTTCCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAATTATCCTATTTATTAAATCT-TGT---GAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCACTCCATTCATACATAGGTTTAATT-TCAAAGTGA-GAAATGCGTGGAAAATTACATTCTTTAGTGAGTAAATAATCAATGACTGAAGACCCGTTGTGAGATACAAAAGTGTACGCACCACTGCCGTAATCATCTCTGAGTCTACCGTTAACTATGCGTAAACGTGCCGACTTACATAAATCAAGAAGCTTGACCCCGTAGTTATTGCATTTTTTGTCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CTGTCATCATCAATACAATCGTTAACTCGGTCGTGAATAATAAAATCATTCTTAGTTCCAACTCGACTATTGAGGTCACC--TG--AC-AAGAAT-ACAGAGCCTAAATTTTCATAGTAATCAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACATTATTATAAACTGGTGAATCCTCTCCCCATATGTAAATGTCACATA-----TATAAACATCATTTTCAAAATGAAAAAAAGT--TACGATCGAGTTTTAACCAAATTA-TGGTGTCATGATG-ATT-TTTAACAATCTCAATACCGTCTTTCAGTTCTTCTTTATA--ATAAACTGCAATACCACCGCTACATCTTTTGGCCTTACGA-TTTTGAAATTTTCTA-TAAAA--GTTATGAAATATGTATCC-TGAAAGTTCAATGTCACTACTTGCACTTGTC-CATGTCT-CATATAAAAATATTATGTCATTTCCGGCTAGTATGTTTACAAAGTCATCACTGCTCTTCTTA--ACTGAAGACAGACCATTGACATTCCATGACAT--CACGTTCAGCTCATCCTCATCGTACCCC--TAGTCCCTCACAGCTCTGCCGTTGATAAACAAAGTATCGTATGCAATCCAGGATGTCTTGCCC-TCT-TGCCGCGCAGCCTTCATCCTCGGAACCAGCCTTCTTCTCCTCTCTACGAT---CTCCCTGGGGAATTGTTCGTTTAC--AAAATATGGAGTCCCTTGTAACGCCTTCCACTATTTACGCACCAACTCCTTCTCCTTGTAC-TCGTGA-AACT-TGGCAAC--TA------TGTTTCGACACCTGCCAGAAACCTTCGAACCCACTCTATGTACCCTCTCGAATACTATCTTCTCCACTATCTCTTTTGCAATATGCATTTGTTCAATTATAAAA-TCC---CT-CAGTTTCACTTCAGCGTCCTCGTTACTCTCTACCT--GGGCCTCCGCAAT-ATTGGAAAAAAGC--AAATTGTTCCTCATT-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATT-TTTCTCTTTCTCTAAT--GAAATAACTTTGTCATTTAGAATGCCTATAGAAAAGTCAGCACTATCGGTTTTCTCCTCCACCCTATTTATCCTCTCGTCTG-----TCAACTTATTTCTGTCCTCTATAACAGTCCACAACTTCTTTAACTCCTTGTCAAACCCATCAAATTTAATTTTC--ATCTCCTCCAAAGCACCCAGTCTCTTATCCATGCTAGTTATTCTACTGTCTATCTGCTTCAAGCATGCCATAATGTCTGCATTTGTTGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCATTT--GTATCGTATAACACGGAGTTTGTTTGGTTCAAAATGTCACTCACC-----GCTACTTCACTAGCCTCC-GGCGGGCCTCCCGATTT---AAACGCC-TTGCTTTGTTGACATTGGTGACTTTCACTACCATTACTTCCACTACTCCCTCTATTCTTCCTTTTCACCTTTCCTCTCATGACTTACTAATCAAACATGGTCCAAACAATTTCTAGTCCAATTTCCAGAAGAAAAAACGCACTGGTTACAATGTAAATCATTATTTTTCATTACTTGTATCAGAGCTCCGAAATATG
gi|10 : TATCAAA--CTCCTCGTTGAAATGTTTGGTTTCGTTC---AAATCGTGCCTGTTACAAAACGTCT--------TCATAGTTTTAACAACGGAAA-ATATCTTTTTCTAAGTTAGAAAAATAATTGTAAAATTAATCAAAAGTTATT----TATTTTTCTATTTTTGATTGATTTTTTTTATTTCAAATACTTCCAAAAT--TGCTTCCGATCGGTATACAA--TGTCTTGGATTTTCTATTTCAACCAAATTT-TTAAATGTTTAAAATGTT------TTgcgtccatt
gi|11 : TATCAAGAGCTCCTTGTTGAA------GGTTTCGGTA---AAATCGT------TACA-----CCTCAAG---TTC-----TT---CAAC----A-ATATATTTGTTGAAATCGGAAAAATAATAAAAAAATTATTCTAATGAAATTTCAATAATATTGTTGCTTTAAGT-AT-GTTTTTA----AAATACTTCCAAAAT--TGCT-----TCGGTTTACAA--TGTCTAAGAATTTCTATTTCTTTC--TTTTCCTTA--ATTTAAAACGTT------TTTTCGTGCTATTC-TGATATTTCTat
gi|12 : AAAATCATGCT-----CG---TTACAAAGTGTCTTATATTTTTTATTTCAGCCAATTGT-TTAA--GTTTAAAACGTC------CTTTCTTACTACGAATAATACTTTTGTAAGCCGTTTTAA-ATTCCTAATAATATTTTCT----------------------TAAT------A--CACACAACGCATTTAAATATCGGGTTTTAGCCATAACACATTCGGCGTCGAACCATTCAGCGTCATTTGCAAAGGACAATATTGGTAAAtt
gi|13 : GGACAATATTGGTAAAATCATT------------TATTGAATCT-TGTTGTGAAACGTCAATATCGCGTGTTATCTTAATAAAAACAGGTAACTTTGCTACAAGACCTTATCTAAAA-
gi|14 : GTGTATCACG--CTCTTGGTTGGAATGTTCAGCATTGTTA---AAATCATGCTCGTTACAAAGTGTCT
gi|15 : gGTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGta
gi|16 : TAGAAAAGTCAGTACT-TCAGT
gi|17 : TGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTacataatgaaactcaccgtacaaacttttcactagtttatccg
gi|2 : ATTGTTATCAAAATCATTATCAGTACAAAAAGATTCGGCATCTTCATTTGCTGT----CTGAAATATATCATTACTTAAGCTAACAAAATAATTTCGGAATTCCTCCAATGATATGTCATTACTTCCGGCATGATTATT-CTTTTTCTTA----AAATATTTCCAAAAT--TCTT-----TAGGTTTACAA--TATTATAAATTCTCTATATCTGATAATTTT-TTTA--ATTCAAAACATCGCTTCTTTTTCTTG--ACG----GTATCTTTATA-TTCTTTTTTATATTTGCAGAAATGCTCCCTATTTAAATCTGATT--TACAACAGGTGT--ATA--TACGTAATGCTTCTAAATATCTGTTCTTGGCAATAACACAATCCTTATCAAACCATTCCGCATGTTTTACAAATGAC-TGGTCAGAAAATGTGACATAACTTTTATGTATATAACTTTTTGAGAATAAAGGATC--CGACACAGCACGAACTATATTGGTAAAATCATTCATAACATCGTTGACAGAATCTCTATT-TGAATAATCAATATTCTTTGTCAATTTATTAAAATCAGACAATTTATTTATTAAACCTGAGCGAAAACGC----TCACGAAGCAAATTATCCCATTTATACTTTA----CGTCGCGCACATCTACAGGTATAGCTGA-AGGTCTT-TTACAACACAAAGAAAATTTAATGGGTGAATGGTCACTCCATTCATTAATAGGGTCAATTGTAAAAGTACTGA--TATGTGAAAAATTACTCTCATTTGTAAGTAAATAGTCAATCACGGATTCTCCGTGCTGTGGCACAAAGGTACACACATC-----CGTATTAATACCT-ATTCTACCGTTTACTATGCGTAAACAAGACGATTTGCATAACTCAAGAAGTTTAACACCCTGACTATTACATGTTTTATCAAGCGAGGACCGGTACATTGGTATATCGGGAACATAATCAAT-ATCATCTGTATAATAATTTACCTTGTCTTGTATAATAAAATCATGTTTAGTACCAACTCTGCTATTCATATCACCCATA--AC-AT--AC-ACCGACCCGAGACTTTCATAAAAAACTATATCATTTTCCAGAAGTTCAAATAAATCAACATTAGCAATATTATATGCAGGGGAATCTTCCCCCCATAAATAAATTCCACATA-----CATATACATCATTATCAAAATTAAAGAA-TT--TATGATCAAGTTTAATCCAAACAA-TGGTGTCCAAGCT-ACT-TTTAACTACCTCAATACCATTTTTTAAAGATTCCTTGTAGTATAAAAC--AATACCACCACTAGATCTTTTGGCATTACGA-TGTTTAAATTTACGG-TAAAA--ATTATGTGAAACATATCCACTCAAGCT-AATATCGCTATTAGTACATGTC-CATGATT-CATATAAGAATACTATGTCATTATCAGCAATAATATTTACAAAGTCACAATTGTCTTTCTTACT-CCTAGTA-AGTACATGAACATTCCATGACAGGAAACGT--AGTTCACCCTCTGTGTAATCC--TAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGAC
gi|3 : ggtctaattcctcgaatgaacaacaAAGAGAGGCCTGGTTCATGTGAATGTCAGTTACATAA-CACTCATCATCAGTATAACCATTAACCTGGTCATGAATAGTAAATTTAGTCTTAATTCCAACTCGACTATTGAGGTCACC--AG--GCTAG--ATTACAGAACCTTAATTTTCATAGTAATTAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCT-ATATGTAAATACCGCATA-----TATAAACATCGTTTTCAAACTGAAAAAT-GT--TACGATCAAGTTTTAACCAAATTA-TGATGTCAAAATT-ATT-TTTAACAATCTAAATACCTTTTTTCAGTGCTTTTTGATA--ATAAAGTGCAGAACCACCGCTATATCTTCTGGCCTTACGA-TTTGAGAATTTTCTG-TAAGA--GTTATCAAATACATATCC-TGCAAGATTAATGTCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCCTTTTCAGCTAATATGCTTACACATTCATCACTGCTCTTCTTA--ATCGTGGACAGACCATTGACATTCCGTGACATAAAGATC--AGCTCACTCTCATCTTA--CCGATAGTATCTTACAGGTCTACCGTTTATGTACGAAGTGTCATAATCAATCCAGGATGTCTTGCCC-ATT-TGTCGCGCAGCCTTCATCCTTGGAACCAGCTTTCTACTCCTCTCTATAAT---CTCCCTGGGAAAGTGTTCGGTTAC--AAACTATGGAAT-CCTTGGAACGTCCCCCAATGTTAATGCACCAACTCCGTCTCCTTGTAT-GCAT------------GAC--TA------TGTTTTGACACCTGCGAGAAATCTTCGCACCAACTCTATGTATCCTCTCGAATACTATCTTCTCTACTATCGCTTTTGCAATATGCATCCTTT--AATTTAAAACTTC---CT-CAGTTTCATCTCAGCG---GC---ACT-------T--GGGCCTTCGCAATAATGGAAAAAAAGCTGAAATTGT-----------CTGAGATTGCAAATAAACAATATCATCTTTCAGG---GCATTTTTTCTCATACGCTCAT--G-----------------A-AAT----ATAGAAAAGTCAGTACTATCAGTTC
gi|4 : aaCATTATCAGCAATAATATTTACAAAGTCACAATTGTCTTTCTTACT-CCTAGTA-AGTCCATGAACATTCCATGACAGGAAACGT--AGTTCACCCTCTGCGTAATCC--TAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGACGTGT--CCCATCTGTCCCTGGCTGCTCTCATCTTAGGTAGAAGCCTCTTCCTCTTCTCTACTAC---CTCTCGTGAAAATTGTTCATTTACATAAAATGCG--GTACCTTGTAATGTTTTTCACTGTTAACGTACGAGTTCTCTTTCTTTGAACAGCGTAA-AT-T-TTGCGAC--AATCGCCCTGTT------CCTTCCCATGGCCTTCACCCCCATTCTGTGTACTCGCTCGAACCCGATATTGTCAACAATGTCCTTCGCTACCTTCATCTTCTCGTGAATAAAGCTACGTACTACAGCTT--CTGCAGCTTCCGC---ACTCTC--CCCCGAGGCTTCCGCAAT-GTTACTAAACACC--AGATTGTTTCTCA-TGGACTGCGATTGTAGGTACACAATTTCATC---CCGGATTACA-TCCCTCTCCTTCTCTAATCCC--ACAACTTTATTGTTCACAATCACCATATGAAAATCTACACTTTCTGTCTTCTCCTCAACTCTCGTTAATCTCTCATCTGATTTTTTA--TTATTT---TCATCTATGATGACCCACAGCTTTTTCAGATCGCGGTCGAACCAATCAACTTT-CTTCTCTAAGCT-CTCCAGAGCACCGAGCCTCTTGTCCATGGCACATATTTTATTGTCAATTTTCTTAAGATATGACATTAAGTCCGCATTTGTCGGTTC
gi|4 : TCGTTTCAGCATCAAATAAAACAGAGTTGGTTTGGCTCAAAATTTCACTCACCGGAATGTTA--TCAGTATCCT-CAGACGGGTCT-CTGGTTTCGAAAA-G--TTTG--TTGTT----TTGTT---CTTCACTATCAtatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttcttcgtttcagcatcaaataaaacagagttggtttggctcaaaatttcactcaccggaatgttatcagtatcctcagacgggtctctggtttcgaaaagtttgttgttttgttcttcactatcacaa
gi|5 : cattatcagcaataatatttacaaagtcacaattgtctttcttactcctagtaagtccatgaacattccatgacaggaaacgtagttcaccctctgcgtaatcctagtccctcactggcctaccgttgatatatagggtgtcgtaagcaatccacgacgtgtcccatctgtccctggctgctctcatcttaggtagaagcctcttcctcttctctactacctctcgtgaaaattgttcatttacataaaatgcggtaccttgtaatgtttttcactgttaacgtacgagttctctttctttgaacagcgtaaattttgcgacaatcgccctgttccttcccatggccttcacccccattctgtgtactcgctcgaacccgatattgtcaacaatgtccttcgctaccttcatcttctcgtgaataaagctacgtactacagcttctgcagcttccgcactctcccccgaggcttccgcaatgttactaaacaccagattgtttctcatggactgcgattgtaggtacacaatttcatcccggattacatccctctccttctctaatcccacaactttattgttcacaatcaccatatgaaaatctacactttctgtcttctcctcaactctcgttaatctctcatctgattttttattattttcatctatgatgacccacagctttttcagatcgcggtcgaaccaatcaactttcttctctaagctctccagagcaccgagcctcttgtccatggcacatattttattgtcaattttcttaagatatgacattaagtccgcatttgtcggttctatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttctTTAACACTGATTTGTATAATAAAATGTTTATTA---CCAACTGTGTTATTTAT-TCACC--TGTAAC-AC--AC-ACCGACCAAACACTTTCTTAATTATATTTATCATTTT--------TCAGA-------ATATTAA------TACAGGG-GGT-ATTCCCCTCCCTATAAATAAATTCCACACA-----CATA--CATCATTTTCAAAATTATAGAA-TT--TGTGATCAAGCTTAATCCAAAATAATAGTATTTATATGTATT-TCTACTAA-CTCAATATCGTTTT------------------A-AAAG---AAT-CCATCACTAGATCGTTTGGCATTACGA-TGTTTAAATTTGCTG-TAAATTTGTT-TGTAATATATCTAC-TGAAAAT--AATATCACAAATAGGACTTGCCTCA-GTTTGTATAGAAAAATACAATATCATTTCCAGAAAAAATATTTAC----TCAACACAATTCATCTTACTACTG-GCA-AGTCCATGAAAGTGTCGTGACAGGAAGCGT--AGTTCGCCGGCTACGTAATTC--TAGCCCCTCACAGGACTGCCGTTAATGCATCATTTGTCGTAAGTAAGCCAAGCTGGCTTGGCC-TCC-TACCATGCCGCCTTCATCTTTGAGAGTAACTTACGCCCCTTCTTTTCGATTACCTCCCTTGGAAATTGTTCATGAAC--AGAATACAGTGTGCTGTCTGACGTCTTCCATTGTTTTCGTACATATTACTCGTCTTTAAAC-AAA-GATA--TATAGCCACTATAT----TTGTTTTT---TCTGCCTTATGTCTTTGCACTCATTTAATGAATCTTTTCAAACGATATCTTATCCAcaa
gi|6 : tacaaGTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATTTAAAGGAATTTCGCTACTTTTATTGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----GTGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTATTACGCATAATATTTGTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTGTAT--TACA-CTGAT-TAAAAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATTGGTAAAAGAAATATTGTTTCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAATTATCCTATTTATTGAATC----TTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCA
gi|7 : ATATTGCTCCTATGCATGTGACATTCAGAAAAAAGTAGGTCAGCCACAT--AGCGGACAATATTGCTA--CTCATTTAGTAGCCCATT-ATTCAATCT-TGTTGTGAAACTTCAATATTGCGTGTTAACTGATTAAAA-CAAGTAACTTTGCTAC---------TCTAAAA-TTATTTTCATGAAT---ACCGTTTCACTTA-AATTTGACTTTGTCTC---CGTCTTCAAGTACA--CGATACCTTTTATTACAGT-TAACGAAAAGCTGATTAGTGAGTGGTCACTCAATTTGTACATAGGTTAAATT-TTGAAGTGA--------GTAG-----TACATACTTTAGTTAGTAAATACTCAATAACAGAACCCTCTTTGTGAAATAC-CAAGTGCAAACACCGCTGCGGCAATCGTTTCTGACTCTATCGTTGGCTATGCGT------GTCAACTT--ATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAAA--TTCGTTTCATGTGATCGTCAGGAACAGAA-TAGTCATCA
gi|8 : TTTCAAGCAATTCAAACAGATCAACAATAATAGTATTGTAAACTGTTGAATTCTCACCC-ATAAGTAAAAACTGCATAATTTATATAAACATCATTATCAAAATGAAAAAGAATAATACGATCGAGTGCCCACCAATTTA-TTGTGTCGTAATG-ATTCTTTTACACTTACAATAC-GTTT--CAATGTTTCTTTATA--ATAAAGCGCAATACCAACGCTACATCTTTTGGCATTACGCTTTTTTGAATTTTCTATTAAAA----CATGAGATACATATCC-CGAAAGTTCAATACCACTTCTTGCACATGTC-CACGTTT-TATA-AAAAATATAATATTACTTCCAGAAAGAACG-TAACAAAGCCATTACTGCTCatgtgc
gi|9 : TAGAAAAGTCAGTACTATCAGTTCTgtactaatcgcggatatacaattgaca
gi|9 : GTTCTAAATGTCACTCACCG-----CCACTTCACTA------------GTTT-CCGAT---------GCCTT-GCTTTGTTGACATTGTTGACTTTCACTACCATTACTACCCTTATTCCTTCCATTCTTCATTTTAGTCTTTCCTGTCATGACTTATTAATTAAATATATTTCAAACGATTTCTAGTACAATTACCAGTAG-AAAAACGCACTGATTACAATGTAAATCATTATTGTTGTTTATATTTATCAGAGCTCCGAATTATGaaatgtcactcaccgccacttcactagtttccgatgccttgctttgttgacattgttgactttcactaccattactacccttattccttccattcttcattttagtctttcctgtcatgacttattaattaaatatatttcaaacgatttctagtacaattaccagtagaaaaacgcactgattacaatgtaaatcattattgttgtttatatttatcagagctccgaattatgaaaaccat
Alignments
lowQualScore : 111 111 111 1111 1111111 111111 11 1 1111111 444444444444444444444444 1 11 111 1 111 11 1 44444444 1 333333 1 1 1111111111111 1 1 22222 22222 11 11 111 22222222222 11 11 1 1 111 11 1 666666666666666666666666666666 222222 1111 222 1 222 3333333333 1 11 333333333 222 1 88888888888888888888888888888 22222 11 222 11 11 1 11 444444 555555555 1 4444444444444 1
lowQualScore : 99 000 0 444 0 111 111 5 8 1 1 1 22 0 44 1 4 1 8 11 7777 99 9999999 99 0 6 99 999999 6 00 3 1 0 0 0000000 111111111111111111111111 0 1 0 1 0 0 3 4 33 1 0 1 8 11 3 1 5 88 55 1 1 3 3 6 0 777 0 4444 777 33 8 0 3 3 1 2 0 1 3 44 33333333 7 1 1 1 3 1 7 0 2 0 1 6 1 1 444444 1 2 2 0 0 0 2 0 0 2 1 1 0 0 777 1 1 77 9999999999999 0 1 1 1 0 11 1 0 1 3 1 3 4 6 1 3 1 1 00000 6 1 33333 1 1 8 77 8 8 3 66 5555 0 11 0 11 0 1 0 8 0 1 1 8 444 0 1 8 0 99 1 1 8 3 8 5 1 1 1 11 22222222222 1 3 11 22 5 11 1 1 1 1 3 0 0 0 00 1 4 1 11 1 0 0 777 1 33 66 0 0 1 1 0 0 1 999999999999999999999999999999 444444 11 1 0 1 0 0 1111 6 1 333 3 6 7 333 8888888888 3 1 88 111111111 7 333 7 2 1 88888888888888888888888888888 6 1 22 1 77777 88 000 1 1 1 2 1 1 66 88 1 5 1 1 22 1 1 1 1 1 1 88 1 1 1 111111 6 777777777 3 2222222222222 7 6 6 6 1 1 1 2 1 1 1 1 1 5 1 22 1 1 1
lowQualScore : .. ... . ... . ... ... . . . . . .. . .. . . . . .. .... .. ....... .. . . .. ...... . .. . . . . ....... ........................ . . . . . . . . .. . . . . .. . . . .. .. . . . . . . ... . .... ... .. . . . . . . . . . .. ........ . . . . . . . . . . . . . . ...... . . . . . . . . . . . . . . ... . . .. ............. . . . . . .. . . . . . . . . . . . . ..... . . ..... . . . .. . . . .. .... . .. . .. . . . . . . . . ... . . . . .. . . . . . . . . . .. ........... . . .. .. . .. . . . . . . . . .. . . . .. . . . ... . .. .. . . . . . . . .............................. ...... .. . . . . . .... . . ... . . . ... .......... . . .. ......... . ... . . . ............................. . . .. . ..... .. ... . . . . . . .. .. . . . . .. . . . . . . .. . . . ...... . ......... . ............. . . . . . . . . . . . . . . . .. . . .
lowQualScore : 22 000 7 000 8 666 666 6 0 0 0 4 88 8 66 4 6 0 0 88 0000 22 2222222 22 3 7 22 222222 4 66 2 0 2 0 2222222 222222222222222222222222 8 2 0 0 2 2 2 2 88 0 8 0 8 66 6 4 6 88 88 4 4 5 5 7 8 555 0 5555 555 88 8 8 2 2 0 5 7 0 3 33 77777777 3 0 0 0 7 0 3 7 0 7 0 7 0 0 000000 0 0 5 2 0 2 5 7 2 5 0 0 2 2 000 0 0 55 5555555555555 0 0 0 0 8 22 0 6 4 2 4 2 0 0 4 2 4 0 00000 0 4 44444 0 4 0 88 0 0 8 44 6666 6 00 8 44 8 0 6 0 6 0 0 0 222 8 4 0 6 00 4 4 0 8 0 6 4 0 7 33 00000000000 4 2 00 44 6 00 4 4 4 0 2 0 0 2 55 0 2 2 22 2 2 2 555 0 88 00 8 2 0 0 8 2 0 888888888888888888888888888888 888888 22 2 8 0 2 7 0000 7 0 333 3 7 3 333 0000000000 3 0 33 333333333 3 333 3 0 0 77777777777777777777777777777 0 0 00 0 55555 00 555 0 0 0 5 0 0 55 55 0 0 0 0 00 0 0 0 0 0 0 00 0 0 0 777777 7 777777777 3 3333333333333 3 7 7 7 0 0 0 5 0 0 0 0 0 5 0 00 0 0 0
consensus : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--T--TACA-CTGAT-T--AAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA-GA--TGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CAGTCATCATCAGTATAATCGTTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-AN--AC-ACNGANCCNAAACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATGAAAAAAANT--TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCGAGNACAGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTAC--AAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTGA-A--T-TNGCGAC--TAT----CTGTTTCGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTC--CCC--GGGCCTCCGCAAT-ATTGNAAAAAAGC--AAATTGTTCCTCA-T-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAAT--G--ACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCT-C-GGCGGGTCT-CCGATTT---AAA-GCCTTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
Reference ( family-8600 ) : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--T--TACA-CTGAT-T--AAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA-GA--TGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CAGTCATCATCAGTATAATCGTTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-AN--AC-ACNGANCCNAAACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATGAAAAAAANT--TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCGAGNACAGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTAC--AAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTGA-A--T-TNGCGAC--TAT----CTGTTTCGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTC--CCC--GGGCCTCCGCAAT-ATTGNAAAAAAGC--AAATTGTTCCTCA-T-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAAT--G--ACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCT-C-GGCGGGTCT-CCGATTT---AAA-GCCTTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
gi|1 : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATTTAAAGGAATTTCGCTACTTTTATTGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----GAGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTATTACGCATAATATTTTTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--TATTACA-CTGAT-T--AAAAACACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATCGGTAAAAGAAATATTGTTCCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAATTATCCTATTTATTAAATCT-TGT---GAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCACTCCATTCATACATAGGTTTAATT-TCAAAGTGA-GAAATGCGTGGAAAATTACATTCTTTAGTGAGTAAATAATCAATGACTGAAGACCCGTTGTGAGATACAAAAGTGTACGCACCACTGCCGTAATCATCTCTGAGTCTACCGTTAACTATGCGTAAACGTGCCGACTTACATAAATCAAGAAGCTTGACCCCGTAGTTATTGCATTTTTTGTCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CTGTCATCATCAATACAATCGTTAACTCGGTCGTGAATAATAAAATCATTCTTAGTTCCAACTCGACTATTGAGGTCACC--TG--AC-AAGAAT-ACAGAGCCTAAATTTTCATAGTAATCAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACATTATTATAAACTGGTGAATCCTCTCCCCATATGTAAATGTCACATA-----TATAAACATCATTTTCAAAATGAAAAAAAGT--TACGATCGAGTTTTAACCAAATTA-TGGTGTCATGATG-ATT-TTTAACAATCTCAATACCGTCTTTCAGTTCTTCTTTATA--ATAAACTGCAATACCACCGCTACATCTTTTGGCCTTACGA-TTTTGAAATTTTCTA-TAAAA--GTTATGAAATATGTATCC-TGAAAGTTCAATGTCACTACTTGCACTTGTC-CATGTCT-CATATAAAAATATTATGTCATTTCCGGCTAGTATGTTTACAAAGTCATCACTGCTCTTCTTA--ACTGAAGACAGACCATTGACATTCCATGACAT--CACGTTCAGCTCATCCTCATCGTACCCC--TAGTCCCTCACAGCTCTGCCGTTGATAAACAAAGTATCGTATGCAATCCAGGATGTCTTGCCC-TCT-TGCCGCGCAGCCTTCATCCTCGGAACCAGCCTTCTTCTCCTCTCTACGAT---CTCCCTGGGGAATTGTTCGTTTAC--AAAATATGGAGTCCCTTGTAACGCCTTCCACTATTTACGCACCAACTCCTTCTCCTTGTAC-TCGTGA-AACT-TGGCAAC--TA------TGTTTCGACACCTGCCAGAAACCTTCGAACCCACTCTATGTACCCTCTCGAATACTATCTTCTCCACTATCTCTTTTGCAATATGCATTTGTTCAATTATAAAA-TCC---CT-CAGTTTCACTTCAGCGTCCTCGTTACTCTCTACCT--GGGCCTCCGCAAT-ATTGGAAAAAAGC--AAATTGTTCCTCATT-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATT-TTTCTCTTTCTCTAAT--GAAATAACTTTGTCATTTAGAATGCCTATAGAAAAGTCAGCACTATCGGTTTTCTCCTCCACCCTATTTATCCTCTCGTCTG-----TCAACTTATTTCTGTCCTCTATAACAGTCCACAACTTCTTTAACTCCTTGTCAAACCCATCAAATTTAATTTTC--ATCTCCTCCAAAGCACCCAGTCTCTTATCCATGCTAGTTATTCTACTGTCTATCTGCTTCAAGCATGCCATAATGTCTGCATTTGTTGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCATTT--GTATCGTATAACACGGAGTTTGTTTGGTTCAAAATGTCACTCACC-----GCTACTTCACTAGCCTCC-GGCGGGCCTCCCGATTT---AAACGCC-TTGCTTTGTTGACATTGGTGACTTTCACTACCATTACTTCCACTACTCCCTCTATTCTTCCTTTTCACCTTTCCTCTCATGACTTACTAATCAAACATGGTCCAAACAATTTCTAGTCCAATTTCCAGAAGAAAAAACGCACTGGTTACAATGTAAATCATTATTTTTCATTACTTGTATCAGAGCTCCGAAATATG
gi|10 : TATCAAA--CTCCTCGTTGAAATGTTTGGTTTCGTTC---AAATCGTGCCTGTTACAAAACGTCT--------TCATAGTTTTAACAACGGAAA-ATATCTTTTTCTAAGTTAGAAAAATAATTGTAAAATTAATCAAAAGTTATT----TATTTTTCTATTTTTGATTGATTTTTTTTATTTCAAATACTTCCAAAAT--TGCTTCCGATCGGTATACAA--TGTCTTGGATTTTCTATTTCAACCAAATTT-TTAAATGTTTAAAATGTT------TTgcgtccatt
gi|11 : TATCAAGAGCTCCTTGTTGAA------GGTTTCGGTA---AAATCGT------TACA-----CCTCAAG---TTC-----TT---CAAC----A-ATATATTTGTTGAAATCGGAAAAATAATAAAAAAATTATTCTAATGAAATTTCAATAATATTGTTGCTTTAAGT-AT-GTTTTTA----AAATACTTCCAAAAT--TGCT-----TCGGTTTACAA--TGTCTAAGAATTTCTATTTCTTTC--TTTTCCTTA--ATTTAAAACGTT------TTTTCGTGCTATTC-TGATATTTCTat
gi|12 : AAAATCATGCT-----CG---TTACAAAGTGTCTTATATTTTTTATTTCAGCCAATTGT-TTAA--GTTTAAAACGTC------CTTTCTTACTACGAATAATACTTTTGTAAGCCGTTTTAA-ATTCCTAATAATATTTTCT----------------------TAAT------A--CACACAACGCATTTAAATATCGGGTTTTAGCCATAACACATTCGGCGTCGAACCATTCAGCGTCATTTGCAAAGGACAATATTGGTAAAtt
gi|13 : GGACAATATTGGTAAAATCATT------------TATTGAATCT-TGTTGTGAAACGTCAATATCGCGTGTTATCTTAATAAAAACAGGTAACTTTGCTACAAGACCTTATCTAAAA-
gi|14 : GTGTATCACG--CTCTTGGTTGGAATGTTCAGCATTGTTA---AAATCATGCTCGTTACAAAGTGTCT
gi|15 : gGTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGta
gi|16 : TAGAAAAGTCAGTACT-TCAGT
gi|17 : TGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTacataatgaaactcaccgtacaaacttttcactagtttatccg
gi|2 : ATTGTTATCAAAATCATTATCAGTACAAAAAGATTCGGCATCTTCATTTGCTGT----CTGAAATATATCATTACTTAAGCTAACAAAATAATTTCGGAATTCCTCCAATGATATGTCATTACTTCCGGCATGATTATT-CTTTTTCTTA----AAATATTTCCAAAAT--TCTT-----TAGGTTTACAA--TATTATAAATTCTCTATATCTGATAATTTT-TTTA--ATTCAAAACATCGCTTCTTTTTCTTG--ACG----GTATCTTTATA-TTCTTTTTTATATTTGCAGAAATGCTCCCTATTTAAATCTGATT--TACAACAGGTGT--ATA--TACGTAATGCTTCTAAATATCTGTTCTTGGCAATAACACAATCCTTATCAAACCATTCCGCATGTTTTACAAATGAC-TGGTCAGAAAATGTGACATAACTTTTATGTATATAACTTTTTGAGAATAAAGGATC--CGACACAGCACGAACTATATTGGTAAAATCATTCATAACATCGTTGACAGAATCTCTATT-TGAATAATCAATATTCTTTGTCAATTTATTAAAATCAGACAATTTATTTATTAAACCTGAGCGAAAACGC----TCACGAAGCAAATTATCCCATTTATACTTTA----CGTCGCGCACATCTACAGGTATAGCTGA-AGGTCTT-TTACAACACAAAGAAAATTTAATGGGTGAATGGTCACTCCATTCATTAATAGGGTCAATTGTAAAAGTACTGA--TATGTGAAAAATTACTCTCATTTGTAAGTAAATAGTCAATCACGGATTCTCCGTGCTGTGGCACAAAGGTACACACATC-----CGTATTAATACCT-ATTCTACCGTTTACTATGCGTAAACAAGACGATTTGCATAACTCAAGAAGTTTAACACCCTGACTATTACATGTTTTATCAAGCGAGGACCGGTACATTGGTATATCGGGAACATAATCAAT-ATCATCTGTATAATAATTTACCTTGTCTTGTATAATAAAATCATGTTTAGTACCAACTCTGCTATTCATATCACCCATA--AC-AT--AC-ACCGACCCGAGACTTTCATAAAAAACTATATCATTTTCCAGAAGTTCAAATAAATCAACATTAGCAATATTATATGCAGGGGAATCTTCCCCCCATAAATAAATTCCACATA-----CATATACATCATTATCAAAATTAAAGAA-TT--TATGATCAAGTTTAATCCAAACAA-TGGTGTCCAAGCT-ACT-TTTAACTACCTCAATACCATTTTTTAAAGATTCCTTGTAGTATAAAAC--AATACCACCACTAGATCTTTTGGCATTACGA-TGTTTAAATTTACGG-TAAAA--ATTATGTGAAACATATCCACTCAAGCT-AATATCGCTATTAGTACATGTC-CATGATT-CATATAAGAATACTATGTCATTATCAGCAATAATATTTACAAAGTCACAATTGTCTTTCTTACT-CCTAGTA-AGTACATGAACATTCCATGACAGGAAACGT--AGTTCACCCTCTGTGTAATCC--TAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGAC
gi|3 : ggtctaattcctcgaatgaacaacaAAGAGAGGCCTGGTTCATGTGAATGTCAGTTACATAA-CACTCATCATCAGTATAACCATTAACCTGGTCATGAATAGTAAATTTAGTCTTAATTCCAACTCGACTATTGAGGTCACC--AG--GCTAG--ATTACAGAACCTTAATTTTCATAGTAATTAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCT-ATATGTAAATACCGCATA-----TATAAACATCGTTTTCAAACTGAAAAAT-GT--TACGATCAAGTTTTAACCAAATTA-TGATGTCAAAATT-ATT-TTTAACAATCTAAATACCTTTTTTCAGTGCTTTTTGATA--ATAAAGTGCAGAACCACCGCTATATCTTCTGGCCTTACGA-TTTGAGAATTTTCTG-TAAGA--GTTATCAAATACATATCC-TGCAAGATTAATGTCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCCTTTTCAGCTAATATGCTTACACATTCATCACTGCTCTTCTTA--ATCGTGGACAGACCATTGACATTCCGTGACATAAAGATC--AGCTCACTCTCATCTTA--CCGATAGTATCTTACAGGTCTACCGTTTATGTACGAAGTGTCATAATCAATCCAGGATGTCTTGCCC-ATT-TGTCGCGCAGCCTTCATCCTTGGAACCAGCTTTCTACTCCTCTCTATAAT---CTCCCTGGGAAAGTGTTCGGTTAC--AAACTATGGAAT-CCTTGGAACGTCCCCCAATGTTAATGCACCAACTCCGTCTCCTTGTAT-GCAT------------GAC--TA------TGTTTTGACACCTGCGAGAAATCTTCGCACCAACTCTATGTATCCTCTCGAATACTATCTTCTCTACTATCGCTTTTGCAATATGCATCCTTT--AATTTAAAACTTC---CT-CAGTTTCATCTCAGCG---GC---ACT-------T--GGGCCTTCGCAATAATGGAAAAAAAGCTGAAATTGT-----------CTGAGATTGCAAATAAACAATATCATCTTTCAGG---GCATTTTTTCTCATACGCTCAT--G-----------------A-AAT----ATAGAAAAGTCAGTACTATCAGTTC
gi|4 : aaCATTATCAGCAATAATATTTACAAAGTCACAATTGTCTTTCTTACT-CCTAGTA-AGTCCATGAACATTCCATGACAGGAAACGT--AGTTCACCCTCTGCGTAATCC--TAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGACGTGT--CCCATCTGTCCCTGGCTGCTCTCATCTTAGGTAGAAGCCTCTTCCTCTTCTCTACTAC---CTCTCGTGAAAATTGTTCATTTACATAAAATGCG--GTACCTTGTAATGTTTTTCACTGTTAACGTACGAGTTCTCTTTCTTTGAACAGCGTAA-AT-T-TTGCGAC--AATCGCCCTGTT------CCTTCCCATGGCCTTCACCCCCATTCTGTGTACTCGCTCGAACCCGATATTGTCAACAATGTCCTTCGCTACCTTCATCTTCTCGTGAATAAAGCTACGTACTACAGCTT--CTGCAGCTTCCGC---ACTCTC--CCCCGAGGCTTCCGCAAT-GTTACTAAACACC--AGATTGTTTCTCA-TGGACTGCGATTGTAGGTACACAATTTCATC---CCGGATTACA-TCCCTCTCCTTCTCTAATCCC--ACAACTTTATTGTTCACAATCACCATATGAAAATCTACACTTTCTGTCTTCTCCTCAACTCTCGTTAATCTCTCATCTGATTTTTTA--TTATTT---TCATCTATGATGACCCACAGCTTTTTCAGATCGCGGTCGAACCAATCAACTTT-CTTCTCTAAGCT-CTCCAGAGCACCGAGCCTCTTGTCCATGGCACATATTTTATTGTCAATTTTCTTAAGATATGACATTAAGTCCGCATTTGTCGGTTC
gi|4 : TCGTTTCAGCATCAAATAAAACAGAGTTGGTTTGGCTCAAAATTTCACTCACCGGAATGTTA--TCAGTATCCT-CAGACGGGTCT-CTGGTTTCGAAAA-G--TTTG--TTGTT----TTGTT---CTTCACTATCAtatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttcttcgtttcagcatcaaataaaacagagttggtttggctcaaaatttcactcaccggaatgttatcagtatcctcagacgggtctctggtttcgaaaagtttgttgttttgttcttcactatcacaa
gi|5 : cattatcagcaataatatttacaaagtcacaattgtctttcttactcctagtaagtccatgaacattccatgacaggaaacgtagttcaccctctgcgtaatcctagtccctcactggcctaccgttgatatatagggtgtcgtaagcaatccacgacgtgtcccatctgtccctggctgctctcatcttaggtagaagcctcttcctcttctctactacctctcgtgaaaattgttcatttacataaaatgcggtaccttgtaatgtttttcactgttaacgtacgagttctctttctttgaacagcgtaaattttgcgacaatcgccctgttccttcccatggccttcacccccattctgtgtactcgctcgaacccgatattgtcaacaatgtccttcgctaccttcatcttctcgtgaataaagctacgtactacagcttctgcagcttccgcactctcccccgaggcttccgcaatgttactaaacaccagattgtttctcatggactgcgattgtaggtacacaatttcatcccggattacatccctctccttctctaatcccacaactttattgttcacaatcaccatatgaaaatctacactttctgtcttctcctcaactctcgttaatctctcatctgattttttattattttcatctatgatgacccacagctttttcagatcgcggtcgaaccaatcaactttcttctctaagctctccagagcaccgagcctcttgtccatggcacatattttattgtcaattttcttaagatatgacattaagtccgcatttgtcggttctatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttctTTAACACTGATTTGTATAATAAAATGTTTATTA---CCAACTGTGTTATTTAT-TCACC--TGTAAC-AC--AC-ACCGACCAAACACTTTCTTAATTATATTTATCATTTT--------TCAGA-------ATATTAA------TACAGGG-GGT-ATTCCCCTCCCTATAAATAAATTCCACACA-----CATA--CATCATTTTCAAAATTATAGAA-TT--TGTGATCAAGCTTAATCCAAAATAATAGTATTTATATGTATT-TCTACTAA-CTCAATATCGTTTT------------------A-AAAG---AAT-CCATCACTAGATCGTTTGGCATTACGA-TGTTTAAATTTGCTG-TAAATTTGTT-TGTAATATATCTAC-TGAAAAT--AATATCACAAATAGGACTTGCCTCA-GTTTGTATAGAAAAATACAATATCATTTCCAGAAAAAATATTTAC----TCAACACAATTCATCTTACTACTG-GCA-AGTCCATGAAAGTGTCGTGACAGGAAGCGT--AGTTCGCCGGCTACGTAATTC--TAGCCCCTCACAGGACTGCCGTTAATGCATCATTTGTCGTAAGTAAGCCAAGCTGGCTTGGCC-TCC-TACCATGCCGCCTTCATCTTTGAGAGTAACTTACGCCCCTTCTTTTCGATTACCTCCCTTGGAAATTGTTCATGAAC--AGAATACAGTGTGCTGTCTGACGTCTTCCATTGTTTTCGTACATATTACTCGTCTTTAAAC-AAA-GATA--TATAGCCACTATAT----TTGTTTTT---TCTGCCTTATGTCTTTGCACTCATTTAATGAATCTTTTCAAACGATATCTTATCCAcaa
gi|6 : tacaaGTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATTTAAAGGAATTTCGCTACTTTTATTGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----GTGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTATTACGCATAATATTTGTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTGTAT--TACA-CTGAT-TAAAAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATTGGTAAAAGAAATATTGTTTCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAATTATCCTATTTATTGAATC----TTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCA
gi|7 : ATATTGCTCCTATGCATGTGACATTCAGAAAAAAGTAGGTCAGCCACAT--AGCGGACAATATTGCTA--CTCATTTAGTAGCCCATT-ATTCAATCT-TGTTGTGAAACTTCAATATTGCGTGTTAACTGATTAAAA-CAAGTAACTTTGCTAC---------TCTAAAA-TTATTTTCATGAAT---ACCGTTTCACTTA-AATTTGACTTTGTCTC---CGTCTTCAAGTACA--CGATACCTTTTATTACAGT-TAACGAAAAGCTGATTAGTGAGTGGTCACTCAATTTGTACATAGGTTAAATT-TTGAAGTGA--------GTAG-----TACATACTTTAGTTAGTAAATACTCAATAACAGAACCCTCTTTGTGAAATAC-CAAGTGCAAACACCGCTGCGGCAATCGTTTCTGACTCTATCGTTGGCTATGCGT------GTCAACTT--ATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAAA--TTCGTTTCATGTGATCGTCAGGAACAGAA-TAGTCATCA
gi|8 : TTTCAAGCAATTCAAACAGATCAACAATAATAGTATTGTAAACTGTTGAATTCTCACCC-ATAAGTAAAAACTGCATAATTTATATAAACATCATTATCAAAATGAAAAAGAATAATACGATCGAGTGCCCACCAATTTA-TTGTGTCGTAATG-ATTCTTTTACACTTACAATAC-GTTT--CAATGTTTCTTTATA--ATAAAGCGCAATACCAACGCTACATCTTTTGGCATTACGCTTTTTTGAATTTTCTATTAAAA----CATGAGATACATATCC-CGAAAGTTCAATACCACTTCTTGCACATGTC-CACGTTT-TATA-AAAAATATAATATTACTTCCAGAAAGAACG-TAACAAAGCCATTACTGCTCatgtgc
gi|9 : TAGAAAAGTCAGTACTATCAGTTCTgtactaatcgcggatatacaattgaca
gi|9 : GTTCTAAATGTCACTCACCG-----CCACTTCACTA------------GTTT-CCGAT---------GCCTT-GCTTTGTTGACATTGTTGACTTTCACTACCATTACTACCCTTATTCCTTCCATTCTTCATTTTAGTCTTTCCTGTCATGACTTATTAATTAAATATATTTCAAACGATTTCTAGTACAATTACCAGTAG-AAAAACGCACTGATTACAATGTAAATCATTATTGTTGTTTATATTTATCAGAGCTCCGAATTATGaaatgtcactcaccgccacttcactagtttccgatgccttgctttgttgacattgttgactttcactaccattactacccttattccttccattcttcattttagtctttcctgtcatgacttattaattaaatatatttcaaacgatttctagtacaattaccagtagaaaaacgcactgattacaatgtaaatcattattgttgtttatatttatcagagctccgaattatgaaaaccat
blockSeqs : AG TCA ATC AGT TAA G T T A A TT AA C A G G TT TTTC CA TCCGATC AG C AT GCTTCT C AA A C T ATTTAAA ATTTACAACAGGTGTATA G A A A G AG A A C TA C C T TC TG A T A A C CAA T ATCC GCA GC G A A T A C G AA TGATAT A A G C G T A G A G T T AAACAA A G G T C T T T GTA T C TA CATAACAT T C C G CT T T T A C A A C C A T ATTTA T A AATAA A T A CA T C C TT AAGA GT TG G T T A T TTG T A TT A A T T G T T T T CA CTCCTAGTA T G . TG A GA T C G C T A G A T A CC T TAC G AT GA A A C T AGCGTAAATTTTGCGACAATCGCCC TTGACA AG A C CGTG C T GTA A C T . CTCCCCCG A A TG TTCTCATG T ATT T T A CCCACAACTTTATTGTTCACAATCACC A A CG A ATTTT . . A A G G A C C TA G . G G CA A T A A T A CA A A G GGAATG C TCCTCAGA . TTCGAAAAGT T C G G A C A A G T A A T . G GT A T T
blockSeqs : . . . TTG GTA T . G T T AA AT G T A . TT . . TC . . . . C CA A C . ACTAGCT TATTACACTGATTAAAAA T . C A A . T A A TT T T G T TG T A A A . . . ACTT . . T A A G C A . TG . . T C A A C . . T . C G . T . G . C G A A ATT G G GG TGTAACAC . A A T TA A C C G C A T C T T A . A T TT T A . AA . . T TT GTGC . CG T . A T . A A . TC T T . T . T A A C TC ATCGTGGAC A A . AT A . A T A G T . . T A T GA C . T . GT G A G A AAAGATATATAGCCACTATATT TTT CA G G AA C A . . . . . T . C . . . . . C C GAAAT T G . . . GCCT . . . .
blockSeqs : . . . TGT GT T . A C T AT GC G C T . TA . . CG . . . . T C . A . . TAATA A . A . C . G T T GT G C T T TG G G T T . . . . . . . . . C A . . . T T T . T T T AGGCTAG . C C A AT T T C A T G T T . A T . A T GT A T . TA . . T T ATGT . C G . T G . G T . T A T . C . G A T T CA CTCCTAGTA T G . TG A . T C G C . . . C T G GT A . T . . . T A A GCATGACTA . TT T A A
blockSeqs : . . . . . . . T A A GA . A T T . G . . TA . . . . . . C . . . . . . T A A A A . . . . . . . A . A A . . A TT C A . GT . . . . . . . C . T T . . A . . T A . . . . A A T AC CTACTGGCA T G . TA . . A A T A .
blockSeqs : . . . GT . . . . . . . G . TT
blockSeqs : .
blockSeqCons : TG TT*** **
originalCons : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--T--TACA-CTGAT-T--AAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA-GA--TGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CAGTCATCATCAGTATAATCGTTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-AN--AC-ACNGANCCNAAACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATGAAAAAAANT--TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCGAGNACAGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTAC--AAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTGA-A--T-TNGCGAC--TAT----CTGTTTCGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTC--CCC--GGGCCTCCGCAAT-ATTGNAAAAAAGC--AAATTGTTCCTCA-T-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAAT--G--ACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCT-C-GGCGGGTCT-CCGATTT---AAA-GCCTTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
finalCons : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--T--TACA-CTGAT-T--AAA--CACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA-GA--TGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CAGTCATCATCAGTATAATCGTTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-AN--AC-ACNGANCCNAAACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATGAAAAAATT---TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCGAGNACAGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTAC--AAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTGA-A--T-TNGCGAC--TAT----CTGTTTCGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTC--CCC--GGGCCTCCGCAAT-ATTGNAAAAAAGC--AAATTGTTCCTCA-T-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAAT--G--ACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCT-C-GGCGGGTCT-CCGATTT---AAA-GCCTTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
Alignments
lowQualScore : 111 111 111 1111 1111111 111111 11 1 1111111 5555555555555555555 1 11 2222 111 1 111 11 1 44444444 1 333333 1 1 1111111111111 1 1 22222 111111 11 11 111 22222222222 11 11 1 1 111 11 1 666666666666666666666666666666 222222 1111 222 1 222 3333333333 1 11 333333333 222 1 88888888888888888888888888888 22222 11 222 11 11 1 11 444444 555555555 1 4444444444444 1
lowQualScore : 99 000 0 444 0 111 111 5 8 1 1 1 22 0 44 1 4 1 8 11 7777 99 9999999 99 0 6 99 999999 6 00 3 1 0 0 0000000 0000000000000000000 0 1 0 1 0 0 3 4 33 1 0 1 8 11 3 1 5 2222 1 1 3 3 6 0 777 0 4444 777 33 8 0 3 3 1 2 0 1 3 44 33333333 7 1 1 1 3 1 7 0 2 0 1 6 1 1 444444 1 2 2 0 0 0 2 0 0 2 1 1 0 0 777 1 1 77 9999999999999 0 1 1 1 0 11 1 0 1 3 1 3 4 6 1 3 1 1 00000 6 1 8 222222 1 1 8 77 8 8 3 66 5555 0 11 0 11 0 1 0 8 0 1 1 8 444 0 1 8 0 99 1 1 8 3 8 5 1 1 1 11 22222222222 1 3 11 22 5 11 1 1 1 1 3 0 0 0 00 1 4 1 11 1 0 0 777 1 33 66 0 0 1 1 0 0 1 999999999999999999999999999999 444444 11 1 0 1 0 0 1111 6 1 333 3 6 7 333 8888888888 3 1 88 111111111 7 333 7 2 1 88888888888888888888888888888 6 1 22 1 77777 88 000 1 1 1 2 1 1 66 88 1 5 1 1 22 1 1 1 1 1 1 88 1 1 1 111111 6 777777777 3 2222222222222 7 6 6 6 1 1 1 2 1 1 1 1 1 5 1 22 1 1 1
lowQualScore : .. ... . ... . ... ... . . . . . .. . .. . . . . .. .... .. ....... .. . . .. ...... . .. . . . . ....... ................... . . . . . . . . .. . . . . .. . . . .... . . . . . . ... . .... ... .. . . . . . . . . . .. ........ . . . . . . . . . . . . . . ...... . . . . . . . . . . . . . . ... . . .. ............. . . . . . .. . . . . . . . . . . . . ..... . . . ...... . . . .. . . . .. .... . .. . .. . . . . . . . . ... . . . . .. . . . . . . . . . .. ........... . . .. .. . .. . . . . . . . . .. . . . .. . . . ... . .. .. . . . . . . . .............................. ...... .. . . . . . .... . . ... . . . ... .......... . . .. ......... . ... . . . ............................. . . .. . ..... .. ... . . . . . . .. .. . . . . .. . . . . . . .. . . . ...... . ......... . ............. . . . . . . . . . . . . . . . .. . . .
lowQualScore : 22 000 7 000 8 666 666 6 0 0 0 4 88 8 66 4 6 0 0 88 0000 22 2222222 22 3 7 22 222222 4 66 2 0 2 0 2222222 2222222222222222222 8 2 0 0 2 2 2 2 88 0 8 0 8 66 6 4 6 4444 4 4 5 5 7 8 555 0 5555 555 88 8 8 2 2 0 5 7 0 3 33 77777777 3 0 0 0 7 0 3 7 0 7 0 7 0 0 000000 0 0 5 2 0 2 5 7 2 5 0 0 2 2 000 0 0 55 5555555555555 0 0 0 0 8 22 0 6 4 2 4 2 0 0 4 2 4 0 00000 0 4 0 000000 0 4 0 88 0 0 8 44 6666 6 00 8 44 8 0 6 0 6 0 0 0 222 8 4 0 6 00 4 4 0 8 0 6 4 0 7 33 00000000000 4 2 00 44 6 00 4 4 4 0 2 0 0 2 55 0 2 2 22 2 2 2 555 0 88 00 8 2 0 0 8 2 0 888888888888888888888888888888 888888 22 2 8 0 2 7 0000 7 0 333 3 7 3 333 0000000000 3 0 33 333333333 3 333 3 0 0 77777777777777777777777777777 0 0 00 0 55555 00 555 0 0 0 5 0 0 55 55 0 0 0 0 00 0 0 0 0 0 0 00 0 0 0 777777 7 777777777 3 3333333333333 3 7 7 7 0 0 0 5 0 0 0 0 0 5 0 00 0 0 0
consensus : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTGTATTACA-CTGAT-TAAAAACACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA-G--ATGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CAGTCATCATCAGTATAATCGTTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-A--NAC-ACNGANCCNAAACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATG-AAAAA--ATT-TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCGAGNACAGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTAC--AAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTGA-A--T-TNGCGAC--TAT----CTGTTTCGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTC--CCC--GGGCCTCCGCAAT-ATTGNAAAAAAGC--AAATTGTTCCTCA-T-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAAT--G--ACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCT-C-GGCGGGTCT-CCGATTT---AAA-GCCTTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
Reference ( family-8600 ) : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTTTTCTAAATTAGAAAAATAATTATAAAATTCATCTAAAGGAATTTCGCTACTTTTGTCGTTTTTATT-ATTNTTTTTA----AAATACTTCCAAAAT--TGCT-----TNGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTACTACGCATAATATTTTTGTAAGTNGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTG--TTACA-CTGAT-T--AAACACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAC-TTATCGGTAAAAGAAATATTGCTCCTNTGCGCATGACGTTTTGAAAACAGTGGGTCAGCGACAC--CNCGAACAATATTGGTAAANTCATTNATTATCCCATTTATTGAATCT-TGTTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTCATGAAT---ACCATTCCACTTA-AATTTAATCCCGTCGC---CGTCTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGNTAATTGGTGCGTGGTCACTCCATTCGTACATAGGTTNAATT-TCGAAGTGA-G--ATGCGTGGAAAATTACATTCTTTAGTNAGTAAATANTCAATNACGGAANCCCCGTTGTGAGATACAAAAGTGCACGCACCGCTGCCGTAATCGTNTCTGANTCTACCGTTNACTATGCGTAAACG-GNCGACTTGCATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CAGTCATCATCAGTATAATCGTTAACCCGGTCNTGNATAATAAAATCATTCTTAGTTCCAACTCNGCTATTNANGTCACC--TG--AC-A--NAC-ACNGANCCNAAACTTTCATAGTAATCNATATCANTTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCCCATAAGTAAATNCCGCATA-----TATAAACATCATTTTCAAAATG-AAAAA--ATT-TACGATCGAGTTTNAACCAAATTA-TGGTGTCGAAATG-ATT-TTTAACAATCTCAATACCGTTTTTCAGTGCTTCTTTATA--ATAAAGCGCAATACCACCGCTANATCTTTTGGCATTACGA-TTTTTAAATTTTCTG-TAAAA--GTTATGAAATACATATCC-CGAAAGTTCAATATCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCATTTCCAGCAANAATGTTTACAAAGTCATCACTGCTCTTCTTACTACCGAGNACAGTCCATGAACATTCCGTGACAGGAAACGT--AGTTCACCCTCTNCGTAATCC--TAGTCCCTCACAGGCCTACCGTTGATATATAAGGTGTCGTAAGCAATCCANGACGTCTTGCCC-TCT-TGCCGCGCNGCCTTCATCCTCGGAANCAGCCTTCTCCTCCTCTCTACGAT---CTCCCTNGGAAATTGTTCGTTTAC--AAAATACGGAGTNCCTTGTAACGTCTTCCACTGTTNACGCACNAACTCCTTCTCCTTGNAC-GCGTGA-A--T-TNGCGAC--TAT----CTGTTTCGACACCTGCCNGAAGCCTTCGCACCCACTCTATGTACCCTCTCGAACACTATCTTNTCCACTATCTCTTTCGCAATATGCATCTTTTCGANTATAAAACTNC---CT-CAGTTTCACTTCAGCGTCCGC---ACTCTC--CCC--GGGCCTCCGCAAT-ATTGNAAAAAAGC--AAATTGTTCCTCA-T-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATTCTTTCTCNTTCTCTAAT--G--ACAACTTTGTCGTTCA-AAT--CCATAGAAAAGTCAGTACTATCAGTTCTCTCCTCNACCCTNNTTANCCTCTCGTCTGATTTTTCAACTTATTTCTGTCNTCTATGACGGCCCACAGCTTCTTCAGNTCNCGGTCGAACCNATCAANTTTANTTCTCTAANCTCCTCCAGAGCACCNAGCCTCTTGTCCATGNCANNTATTCTACTGTCNATCTNCTTNAGGCATGNCATNANGTCCGCATTTGTCGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCGTTTCAGCATCGNATAANACGGAGTTNGTTTGGTTCAAAATGTCACTCACCG----GCTACTTCACTA-CCT-C-GGCGGGTCT-CCGATTT---AAA-GCCTTTGCTTTGTTGACATTGTTGACTTTCACTACCATTACTNCCNCTACTCCCTCCATTCTTCNTTTTCGCCTTTCCTNTCATGACTTACTAATCAAACATGNTCCAAACGATTTCTAGTNCAATTNCCAGNAGAAAAAACGCACTGGTTACAATGTAAATCATTATTNTTNNTTACNTNTATCAGAGCTCCGAANTATG
gi|1 : GTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATTTAAAGGAATTTCGCTACTTTTATTGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----GAGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTATTACGCATAATATTTTTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTGTATTACA-CTGAT-TAAAAACACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATCGGTAAAAGAAATATTGTTCCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAATTATCCTATTTATTAAATC----TTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCACTCCATTCATACATAGGTTTAATT-TCAAAGTGA-GAAATGCGTGGAAAATTACATTCTTTAGTGAGTAAATAATCAATGACTGAAGACCCGTTGTGAGATACAAAAGTGTACGCACCACTGCCGTAATCATCTCTGAGTCTACCGTTAACTATGCGTAAACGTGCCGACTTACATAAATCAAGAAGCTTGACCCCGTAGTTATTGCATTTTTTGTCAAGAGAGGCCCGGTTCATGTGAACGTCAGGAACATAA-CTGTCATCATCAATACAATCGTTAACTCGGTCGTGAATAATAAAATCATTCTTAGTTCCAACTCGACTATTGAGGTCACC--TG--AC-AAGAAT-ACAGAGCCTAAATTTTCATAGTAATCAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACATTATTATAAACTGGTGAATCCTCTCCCCATATGTAAATGTCACATA-----TATAAACATCATTTTCAAAATGAAAAAA--AGT-TACGATCGAGTTTTAACCAAATTA-TGGTGTCATGATG-ATT-TTTAACAATCTCAATACCGTCTTTCAGTTCTTCTTTATA--ATAAACTGCAATACCACCGCTACATCTTTTGGCCTTACGA-TTTTGAAATTTTCTA-TAAAA--GTTATGAAATATGTATCC-TGAAAGTTCAATGTCACTACTTGCACTTGTC-CATGTCT-CATATAAAAATATTATGTCATTTCCGGCTAGTATGTTTACAAAGTCATCACTGCTCTTCTTA--ACTGAAGACAGACCATTGACATTCCATGACAT--CACGTTCAGCTCATCCTCATCGTACCCC--TAGTCCCTCACAGCTCTGCCGTTGATAAACAAAGTATCGTATGCAATCCAGGATGTCTTGCCC-TCT-TGCCGCGCAGCCTTCATCCTCGGAACCAGCCTTCTTCTCCTCTCTACGAT---CTCCCTGGGGAATTGTTCGTTTAC--AAAATATGGAGTCCCTTGTAACGCCTTCCACTATTTACGCACCAACTCCTTCTCCTTGTAC-TCGTGA-AACT-TGGCAAC--TA------TGTTTCGACACCTGCCAGAAACCTTCGAACCCACTCTATGTACCCTCTCGAATACTATCTTCTCCACTATCTCTTTTGCAATATGCATTTGTTCAATTATAAAA-TCC---CT-CAGTTTCACTTCAGCGTCCTCGTTACTCTCTACCT--GGGCCTCCGCAAT-ATTGGAAAAAAGC--AAATTGTTCCTCATT-GACTGCGATTGTAAATAAACAATATCATCTTTCAGG---GCATT-TTTCTCTTTCTCTAAT--GAAATAACTTTGTCATTTAGAATGCCTATAGAAAAGTCAGCACTATCGGTTTTCTCCTCCACCCTATTTATCCTCTCGTCTG-----TCAACTTATTTCTGTCCTCTATAACAGTCCACAACTTCTTTAACTCCTTGTCAAACCCATCAAATTTAATTTTC--ATCTCCTCCAAAGCACCCAGTCTCTTATCCATGCTAGTTATTCTACTGTCTATCTGCTTCAAGCATGCCATAATGTCTGCATTTGTTGGCTCATTACTACGCAAACCCCCTCCAGACGCCATGTTTGATTTAGTAGTAGTAGAAGTTTTTGGTAAAACTGAGTCAGCGTCCGATTCTTTGGCACTCTCAGAAATAATTGGTGAATTAAATACTTTATCACTATTGAAACTTGTCTCATTT--GTATCGTATAACACGGAGTTTGTTTGGTTCAAAATGTCACTCACC-----GCTACTTCACTAGCCTCC-GGCGGGCCTCCCGATTT---AAACGCC-TTGCTTTGTTGACATTGGTGACTTTCACTACCATTACTTCCACTACTCCCTCTATTCTTCCTTTTCACCTTTCCTCTCATGACTTACTAATCAAACATGGTCCAAACAATTTCTAGTCCAATTTCCAGAAGAAAAAACGCACTGGTTACAATGTAAATCATTATTTTTCATTACTTGTATCAGAGCTCCGAAATATG
gi|10 : TATCAAA--CTCCTCGTTGAAATGTTTGGTTTCGTTC---AAATCGTGCCTGTTACAAAACGTCT--------TCATAGTTTTAACAACGGAAA-ATATCTTTTTCTAAGTTAGAAAAATAATTGTAAAATTAATCAAAAGTTATT----TATTTTTCTATTTTTGATTGATTTTTTTTATTTCAAATACTTCCAAAAT--TGCTTCCGATCGGTATACAA--TGTCTTGGATTTTCTATTTCAACCAAATTT-TTAAATGTTTAAAATGTT------TTgcgtccatt
gi|11 : TATCAAGAGCTCCTTGTTGAA------GGTTTCGGTA---AAATCGT------TACA-----CCTCAAG---TTC-----TT---CAAC----A-ATATATTTGTTGAAATCGGAAAAATAATAAAAAAATTATTCTAATGAAATTTCAATAATATTGTTGCTTTAAGT-AT-GTTTTTA----AAATACTTCCAAAAT--TGCT-----TCGGTTTACAA--TGTCTAAGAATTTCTATTTCTTTC--TTTTCCTTA--ATTTAAAACGTT------TTTTCGTGCTATTC-TGATATTTCTat
gi|12 : AAAATCATGCT-----CG---TTACAAAGTGTCTTATATTTTTTATTTCAGCCAATTGT-TTAA--GTTTAAAACGTC------CTTTCTTACTACGAATAATACTTTTGTAAGCCGTTTTAA-ATTCCTAATAATATTTTCT--------------------TAAT------ACACACAACGCATTTAAATATCGGGTTTTAGCCATAACACATTCGGCGTCGAACCATTCAGCGTCATTTGCAAAGGACAATATTGGTAAAtt
gi|13 : GGACAATATTGGTAAAATCATT------------TATTGAATCT-TGTTGTGAAACGTCAATATCGCGTGTTATCTTAATAAAAACAGGTAACTTTGCTACAAGACCTTATCTAAAA-
gi|14 : GTGTATCACG--CTCTTGGTTGGAATGTTCAGCATTGTTA---AAATCATGCTCGTTACAAAGTGTCT
gi|15 : gGTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGta
gi|16 : TAGAAAAGTCAGTACT-TCAGT
gi|17 : TGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTacataatgaaactcaccgtacaaacttttcactagtttatccg
gi|2 : ATTGTTATCAAAATCATTATCAGTACAAAAAGATTCGGCATCTTCATTTGCTGT----CTGAAATATATCATTACTTAAGCTAACAAAATAATTTCGGAATTCCTCCAATGATATGTCATTACTTCCGGCATGATTATT-CTTTTTCTTA----AAATATTTCCAAAAT--TCTT-----TAGGTTTACAA--TATTATAAATTCTCTATATCTGATAATTTT-TTTA--ATTCAAAACATCGCTTCTTTTTCTTG--ACG----GTATCTTTATA-TTCTTTTTTATATTTGCAGAAATGCTCCCTATTTAAATCTGATTTACAACAGGTGT--ATATACGTAATGCTTCTAAATATCTGTTCTTGGCAATAACACAATCCTTATCAAACCATTCCGCATGTTTTACAAATGAC-TGGTCAGAAAATGTGACATAACTTTTATGTATATAACTTTTTGAGAATAAAGGATC--CGACACAGCACGAACTATATTGGTAAAATCATTCATAACATCGTTGACAGAATCTCTATT-TGAATAATCAATATTCTTTGTCAATTTATTAAAATCAGACAATTTATTTATTAAACCTGAGCGAAAACGC----TCACGAAGCAAATTATCCCATTTATACTTTA----CGTCGCGCACATCTACAGGTATAGCTGA-AGGTCTT-TTACAACACAAAGAAAATTTAATGGGTGAATGGTCACTCCATTCATTAATAGGGTCAATTGTAAAAGTACTG--ATATGTGAAAAATTACTCTCATTTGTAAGTAAATAGTCAATCACGGATTCTCCGTGCTGTGGCACAAAGGTACACACATC-----CGTATTAATACCT-ATTCTACCGTTTACTATGCGTAAACAAGACGATTTGCATAACTCAAGAAGTTTAACACCCTGACTATTACATGTTTTATCAAGCGAGGACCGGTACATTGGTATATCGGGAACATAATCAAT-ATCATCTGTATAATAATTTACCTTGTCTTGTATAATAAAATCATGTTTAGTACCAACTCTGCTATTCATATCACCCATA--AC-A--TAC-ACCGACCCGAGACTTTCATAAAAAACTATATCATTTTCCAGAAGTTCAAATAAATCAACATTAGCAATATTATATGCAGGGGAATCTTCCCCCCATAAATAAATTCCACATA-----CATATACATCATTATCAAAATT-AAAGA--ATT-TATGATCAAGTTTAATCCAAACAA-TGGTGTCCAAGCT-ACT-TTTAACTACCTCAATACCATTTTTTAAAGATTCCTTGTAGTATAAAAC--AATACCACCACTAGATCTTTTGGCATTACGA-TGTTTAAATTTACGG-TAAAA--ATTATGTGAAACATATCCACTCAAGCT-AATATCGCTATTAGTACATGTC-CATGATT-CATATAAGAATACTATGTCATTATCAGCAATAATATTTACAAAGTCACAATTGTCTTTCTTACT-CCTAGTA-AGTACATGAACATTCCATGACAGGAAACGT--AGTTCACCCTCTGTGTAATCC--TAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGAC
gi|3 : ggtctaattcctcgaatgaacaacaAAGAGAGGCCTGGTTCATGTGAATGTCAGTTACATAA-CACTCATCATCAGTATAACCATTAACCTGGTCATGAATAGTAAATTTAGTCTTAATTCCAACTCGACTATTGAGGTCACC--AG--GCTA--GATTACAGAACCTTAATTTTCATAGTAATTAATATCAATTTCAAGCAACTCAAACAAGTCAACATTAACAATATTATAAACTGGTGAATCCTCCCCT-ATATGTAAATACCGCATA-----TATAAACATCGTTTTCAAACTG-AAAAA--TGT-TACGATCAAGTTTTAACCAAATTA-TGATGTCAAAATT-ATT-TTTAACAATCTAAATACCTTTTTTCAGTGCTTTTTGATA--ATAAAGTGCAGAACCACCGCTATATCTTCTGGCCTTACGA-TTTGAGAATTTTCTG-TAAGA--GTTATCAAATACATATCC-TGCAAGATTAATGTCACTACTTGCACTTGTC-CATGTTT-CATATAAAAATATAATGTCCTTTTCAGCTAATATGCTTACACATTCATCACTGCTCTTCTTA--ATCGTGGACAGACCATTGACATTCCGTGACATAAAGATC--AGCTCACTCTCATCTTA--CCGATAGTATCTTACAGGTCTACCGTTTATGTACGAAGTGTCATAATCAATCCAGGATGTCTTGCCC-ATT-TGTCGCGCAGCCTTCATCCTTGGAACCAGCTTTCTACTCCTCTCTATAAT---CTCCCTGGGAAAGTGTTCGGTTAC--AAACTATGGAAT-CCTTGGAACGTCCCCCAATGTTAATGCACCAACTCCGTCTCCTTGTAT-GCAT------------GAC--TA------TGTTTTGACACCTGCGAGAAATCTTCGCACCAACTCTATGTATCCTCTCGAATACTATCTTCTCTACTATCGCTTTTGCAATATGCATCCTTT--AATTTAAAACTTC---CT-CAGTTTCATCTCAGCG---GC---ACT-------T--GGGCCTTCGCAATAATGGAAAAAAAGCTGAAATTGT-----------CTGAGATTGCAAATAAACAATATCATCTTTCAGG---GCATTTTTTCTCATACGCTCAT--G-----------------A-AAT----ATAGAAAAGTCAGTACTATCAGTTC
gi|4 : aaCATTATCAGCAATAATATTTACAAAGTCACAATTGTCTTTCTTACT-CCTAGTA-AGTCCATGAACATTCCATGACAGGAAACGT--AGTTCACCCTCTGCGTAATCC--TAGTCCCTCACTGGCCTACCGTTGATATATAGGGTGTCGTAAGCAATCCACGACGTGT--CCCATCTGTCCCTGGCTGCTCTCATCTTAGGTAGAAGCCTCTTCCTCTTCTCTACTAC---CTCTCGTGAAAATTGTTCATTTACATAAAATGCG--GTACCTTGTAATGTTTTTCACTGTTAACGTACGAGTTCTCTTTCTTTGAACAGCGTAA-AT-T-TTGCGAC--AATCGCCCTGTT------CCTTCCCATGGCCTTCACCCCCATTCTGTGTACTCGCTCGAACCCGATATTGTCAACAATGTCCTTCGCTACCTTCATCTTCTCGTGAATAAAGCTACGTACTACAGCTT--CTGCAGCTTCCGC---ACTCTC--CCCCGAGGCTTCCGCAAT-GTTACTAAACACC--AGATTGTTTCTCA-TGGACTGCGATTGTAGGTACACAATTTCATC---CCGGATTACA-TCCCTCTCCTTCTCTAATCCC--ACAACTTTATTGTTCACAATCACCATATGAAAATCTACACTTTCTGTCTTCTCCTCAACTCTCGTTAATCTCTCATCTGATTTTTTA--TTATTT---TCATCTATGATGACCCACAGCTTTTTCAGATCGCGGTCGAACCAATCAACTTT-CTTCTCTAAGCT-CTCCAGAGCACCGAGCCTCTTGTCCATGGCACATATTTTATTGTCAATTTTCTTAAGATATGACATTAAGTCCGCATTTGTCGGTTC
gi|4 : TCGTTTCAGCATCAAATAAAACAGAGTTGGTTTGGCTCAAAATTTCACTCACCGGAATGTTA--TCAGTATCCT-CAGACGGGTCT-CTGGTTTCGAAAA-G--TTTG--TTGTT----TTGTT---CTTCACTATCAtatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttcttcgtttcagcatcaaataaaacagagttggtttggctcaaaatttcactcaccggaatgttatcagtatcctcagacgggtctctggtttcgaaaagtttgttgttttgttcttcactatcacaa
gi|5 : cattatcagcaataatatttacaaagtcacaattgtctttcttactcctagtaagtccatgaacattccatgacaggaaacgtagttcaccctctgcgtaatcctagtccctcactggcctaccgttgatatatagggtgtcgtaagcaatccacgacgtgtcccatctgtccctggctgctctcatcttaggtagaagcctcttcctcttctctactacctctcgtgaaaattgttcatttacataaaatgcggtaccttgtaatgtttttcactgttaacgtacgagttctctttctttgaacagcgtaaattttgcgacaatcgccctgttccttcccatggccttcacccccattctgtgtactcgctcgaacccgatattgtcaacaatgtccttcgctaccttcatcttctcgtgaataaagctacgtactacagcttctgcagcttccgcactctcccccgaggcttccgcaatgttactaaacaccagattgtttctcatggactgcgattgtaggtacacaatttcatcccggattacatccctctccttctctaatcccacaactttattgttcacaatcaccatatgaaaatctacactttctgtcttctcctcaactctcgttaatctctcatctgattttttattattttcatctatgatgacccacagctttttcagatcgcggtcgaaccaatcaactttcttctctaagctctccagagcaccgagcctcttgtccatggcacatattttattgtcaattttcttaagatatgacattaagtccgcatttgtcggttctatacaactttccgctataactgatttttttaactatacacacattgtcagttccagttttctTTAACACTGATTTGTATAATAAAATGTTTATTA---CCAACTGTGTTATTTAT-TCACC--TGTAAC-A--CAC-ACCGACCAAACACTTTCTTAATTATATTTATCATTTT--------TCAGA-------ATATTAA------TACAGGG-GGT-ATTCCCCTCCCTATAAATAAATTCCACACA-----CATA--CATCATTTTCAAAATT-ATAGA--ATT-TGTGATCAAGCTTAATCCAAAATAATAGTATTTATATGTATT-TCTACTAA-CTCAATATCGTTTT------------------A-AAAG---AAT-CCATCACTAGATCGTTTGGCATTACGA-TGTTTAAATTTGCTG-TAAATTTGTT-TGTAATATATCTAC-TGAAAAT--AATATCACAAATAGGACTTGCCTCA-GTTTGTATAGAAAAATACAATATCATTTCCAGAAAAAATATTTAC----TCAACACAATTCATCTTACTACTG-GCA-AGTCCATGAAAGTGTCGTGACAGGAAGCGT--AGTTCGCCGGCTACGTAATTC--TAGCCCCTCACAGGACTGCCGTTAATGCATCATTTGTCGTAAGTAAGCCAAGCTGGCTTGGCC-TCC-TACCATGCCGCCTTCATCTTTGAGAGTAACTTACGCCCCTTCTTTTCGATTACCTCCCTTGGAAATTGTTCATGAAC--AGAATACAGTGTGCTGTCTGACGTCTTCCATTGTTTTCGTACATATTACTCGTCTTTAAAC-AAA-GATA--TATAGCCACTATAT----TTGTTTTT---TCTGCCTTATGTCTTTGCACTCATTTAATGAATCTTTTCAAACGATATCTTATCCAcaa
gi|6 : tacaaGTGTATCAAG--CTCCTCGTTGAAATGTTCGGTATCGTTA---AAATCGTGCTCGTTACAAAACGTCTCGGC---TTCATTGTTTGTACAACTGAAA-ATATCTTCTTCTAAATTAGAAAAATAATTATAAAATTCATTTAAAGGAATTTCGCTACTTTTATTGTTTTTATT-ATTATTTTTA----AAATACTTCCAAAAT--TGCT-----GTGGTTTACAA--TGTCTTAGATTTTCTATTTCAGTCAATTTT-TTTA--GTTCAAAACGTC------TTTTCTTATTACGCATAATATTTGTGTAAGTAGTTTTCA-ATTCGCAATAATGTTTCCTACTAGCTTCTGTATTACA-CTGAT-TAAAAACACGCAACGCATCTAAATATCGGGTTTTAGCCGTAACACATTCGGCGTCGAACCATTCAGCGTTTTTTACGAAAGAT-TTATTGGTAAAAGAAATATTGTTTCTCTGCGCATGACGTTTTGAAAACAGTGGGTCAGCAATAC--CTCGAACAATATTGGTAAATTCATTAATTATCCTATTTATTGAATC----TTGTGAAGCGTCAATATCGCGCGTTAGCTGATTAAAAACAGGTAACTTTGCTATAAGACCCGATCTAAAA-GTATTTTTATGAAT---ACCATTCCACTTA-AATTTAATCCCATCGC---CGTTTTCAAGTACA--TGAGAACTTTTATTACAGCACAAAGAAAAGGTAATTGGTGCGTGGTCA
gi|7 : ATATTGCTCCTATGCATGTGACATTCAGAAAAAAGTAGGTCAGCCACAT--AGCGGACAATATTGCTA--CTCATTTAGTAGCCCATT-ATTCAATCT-TGTTGTGAAACTTCAATATTGCGTGTTAACTGATTAAAA-CAAGTAACTTTGCTAC---------TCTAAAA-TTATTTTCATGAAT---ACCGTTTCACTTA-AATTTGACTTTGTCTC---CGTCTTCAAGTACA--CGATACCTTTTATTACAGT-TAACGAAAAGCTGATTAGTGAGTGGTCACTCAATTTGTACATAGGTTAAATT-TTGAAGTGA--------GTAG-----TACATACTTTAGTTAGTAAATACTCAATAACAGAACCCTCTTTGTGAAATAC-CAAGTGCAAACACCGCTGCGGCAATCGTTTCTGACTCTATCGTTGGCTATGCGT------GTCAACTT--ATAAATCAAGAAGTTTAACCCCGTAATTATTGCATGTTTTATCAAGAAA--TTCGTTTCATGTGATCGTCAGGAACAGAA-TAGTCATCA
gi|8 : TTTCAAGCAATTCAAACAGATCAACAATAATAGTATTGTAAACTGTTGAATTCTCACCC-ATAAGTAAAAACTGCATAATTTATATAAACATCATTATCAAAATG-AAAAAGAATAATACGATCGAGTGCCCACCAATTTA-TTGTGTCGTAATG-ATTCTTTTACACTTACAATAC-GTTT--CAATGTTTCTTTATA--ATAAAGCGCAATACCAACGCTACATCTTTTGGCATTACGCTTTTTTGAATTTTCTATTAAAA----CATGAGATACATATCC-CGAAAGTTCAATACCACTTCTTGCACATGTC-CACGTTT-TATA-AAAAATATAATATTACTTCCAGAAAGAACG-TAACAAAGCCATTACTGCTCatgtgc
gi|9 : TAGAAAAGTCAGTACTATCAGTTCTgtactaatcgcggatatacaattgaca
gi|9 : GTTCTAAATGTCACTCACCG-----CCACTTCACTA------------GTTT-CCGAT---------GCCTT-GCTTTGTTGACATTGTTGACTTTCACTACCATTACTACCCTTATTCCTTCCATTCTTCATTTTAGTCTTTCCTGTCATGACTTATTAATTAAATATATTTCAAACGATTTCTAGTACAATTACCAGTAG-AAAAACGCACTGATTACAATGTAAATCATTATTGTTGTTTATATTTATCAGAGCTCCGAATTATGaaatgtcactcaccgccacttcactagtttccgatgccttgctttgttgacattgttgactttcactaccattactacccttattccttccattcttcattttagtctttcctgtcatgacttattaattaaatatatttcaaacgatttctagtacaattaccagtagaaaaacgcactgattacaatgtaaatcattattgttgtttatatttatcagagctccgaattatgaaaaccat