lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 7777777777777777777777 8888888888888888888888888888888888888888888888 222222 222 3333333333333333333333 11 2222222222 1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 4444444444444444444444444444444444444444444444 2222222222222222222 1 111111 11111111 1 1 444444444444444444444444444 11 11111111111 1 222222 11111111 55555555555555555555555 1111 1111 11 11 3333 1 111 111 11 11111
lowQualScore : 3333333333333333333333 3333333333333333333333333333333333333333333333 999999 33 6 1 666666 000 4444444444444444444444 33 8888888888 2 9 2 888 66 0 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 6666666666666666666666666666666666666666666666 5 55 0 4 4 6666666666666666666 4 5 2 9 1 5 55 000000 66666666 5 2 1 2 2 2 2 4 9 0 44 333333333333333333333333333 3 66 66 2 99999999999 2 888 77 5 6 5 2 2 4 222222 3 88888888 22222222222222222222222 1 0000 0000 0 0 77 00 777 0000 9 4 9999 0 3 1 000 888 0 888 1 3 0 77777 7777777 6666 555 2 11 55 0 2 00000 777
lowQualScore : ...................... .............................................. ...... .. . . ...... ... ...................... .. .......... . . . ... .. . ................................................................................................................... .............................................. . .. . . . ................... . . . . . . .. ...... ........ . . . . . . . . . . .. ........................... . .. .. . ........... . ... .. . . . . . . ...... . ........ ....................... . .... .... . . .. .. ... .... . . .... . . . ... ... . ... . . . ..... ....... .... ... . .. .. . . ..... ...
lowQualScore : 5555555555555555555555 0000000000000000000000000000000000000000000000 555555 33 7 7 000000 888 4444444444444444444444 99 2222222222 0 0 5 888 99 8 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0000000000000000000000000000000000000000000000 7 88 2 1 0 5555555555555555555 0 7 5 2 7 4 55 555555 11111111 6 5 1 1 2 2 2 6 4 2 66 888888888888888888888888888 1 55 55 5 55555555555 0 888 22 0 4 5 4 0 4 222222 1 11111111 44444444444444444444444 1 6666 6666 2 2 44 55 000 9999 6 5 6666 1 7 1 000 888 5 888 0 6 5 11111 4444444 1111 000 9 88 00 3 5 00000 000
consensus : CAGGGTTCATACAGATAAGGACTGATAAAATTCA----------------------AGCACTTTTCAA--------G-----------GTCAAAAT-----T------T-----CAA-----TTTCAAGCACTTNAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTAT-CCGAGGGGCTAGT-N-ACAGCATTGGGCTAGTTA---CAC-ATATTGTGTAACTAGCCC-------A--GCTGTCTCTCCCAATAAAGACAACGTAAACATATG---AACAGCA--ACATA-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAANTTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAANTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTCATTTTTCTT--GTGTTTC------TCGCT--------CTTATCCTGCGACTTCAGGGCTGAATACACACTTTCTCCGAGGCATTGTTATCCGTTTATTACTACCATGTGCTTT-TG-----------GATACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ANGGGTGTTA---TCG-GCAA-TTTTTCTGCGCGGGTTATGGGAGA-AT------TATTTATCAACTGCGTTAA--------ATTT------------GTT-------NAGGCG----AC----AACACGCCGTATCTATTTTT-AAAATTAGAACAGGTGCGCA---CTGGTTCCCAGCAG---TGCTGCACTGCAGCAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTC---ATA---TACT---CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATG-----ATT----TTT---GT-TC--A-NTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAA-----AAT---AAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
Reference ( gi|1 ) : CAGGGTTCATACAGATAAGGACTGATAAAATTCA----------------------AGCACTTTTCAA--------G-----------GTCAAAAT-----T------T-----CAA-----TTTCAAGCACTTTAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTAT-CAGAGGGGCTAGT-A-ACAGTATTGGGATAGTTA---CA--ATATTGTGTAACTAGCCC-------A--GCTGTATATCCCAATAAAGATAACGTAAACATATG---AACAGCA--ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAACCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCACTTTCTTTGTACTACACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGACGTTCCATTTTTATT--GTGTTTC------TCGCT--------CTTATCCTGCGAATTCAGGGCTGTATACACATTTTTTCCGAGGCATTGTTATCTGTTTATTACTACCATGTGCTTT-TG-----------GATGCAA-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTAAATTGCATTTGAACCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGCTA---TCA-GCAA-TTTTTCTGCGTGGATAACGAGAGA-AT------TATTTATCAACTGTGTTAA--------ATTT------------GTT-------AAGGCG----AC----AACACACCGTATCTATTTTA-AAAATTAGAACAGGTAGGCA---CTGGTTCCCAGCA----TGCTGCACTGCA-CAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCGTATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATA---TATT---CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATG-----ATT----TTT---GT-TC--A-TTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAA-----AAT---AAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|12 : CAGGGTTCATACAGATAAGGACTGATAAAATTCAAGCACTTTTCAAGCACTTTTCAAGCACTTTTCAA--------G-----------GTCAAAAT-----T------T-----CAA-----TTTCAAGCATTAAAATAGATGAACTCGCCAAACATACTTAC-TGTACCTTAGGAGTTCCTGCGCAGCTAT-CCGAGGGGCTAGT-A-ACAGTATTGGGATAGTTA---CA--ATATTGTGTAACTAGCCC-------A--GCTGTCTATTCCAATAAAGACAATGTAAACATATG---AACAGCA--ACAT
gi|10 : CAGGGTTCATACAGATTAGGACCTATAAAATTCAAGCACTTTTCA-----------AGCACTTTTCAA--------G-----------GTCAAAAT-----T------T-----CAA-----TTTCAAGCACTAAAATAGATGAACTCGACATACATACTTAC-TGTATCTTAGGAGTTCCTGCACAACTAT-CCGAGGGGCTAGT-T-ACA----------------------ATATTGTGTAACTTGCCC-------A--GCTGTCTCTCCCAATAAAGACAACGTAAACATATG---AACAGCA--ACATA
gi|13 : CAGGGTTCATACATGTAAGGACTGATAAAATTCAAGCACTTTTCA-----------AGCACTTTTCAA--------G-----------ATCAAAAT-----T------T-----CAA-----TTTCAAGCACTAAAATAGATGAACTCGCCATATATACTTAC-TG-----TAGGAGTTCCTGCACAGCTAG-CCGAGGGGCTAGT-T-ACA----------------------ATATTGTGTAACTAGCCC-------A--GCTGTCTCTCCCAATAAAGACAATGTAAACATATG---AACAGTA--ACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttattagaaaaacatcaaaatt
gi|2 : GACTGATAAAATTCA----------------------AGCACTTTTCAA--------GCACTTTTCAAGGTCAAAAT-----T------T-----TAA-----TTTGAAGCACTTAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTAT-CAGAGGGGCTAGT-A-ACAGTATTGGGATAGTTA---CA--ATATTGTGTAACTAGCCC-------A--GCTGTATATCCCAATAAAGATAACGTAAACATATGAACAGCAACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAATTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTACAAGTTCAGTTAGTTTCACACAACCAAGTACTCCCACA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCACTTTCTTTGTACTATACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGACGTTCCATTTTTATT--GTGTTTC------TCGCT--------CTTATCCCGCGACTTCAGGGCTGTATACACATTTTTTCCGAGGCATTGTTATCTGTTTATTACTACCATGTGCTTT-TG-----------GATGCAG-----TGCGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTAAATTGCATTTGAACCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGCTA---TCG-GCAATTTTTTCTGCGTGGGTAACGAGAGA-AT------TATTTATCAACTGTGTTAA--------ATTT------------GTT-------AAGGCG----AC----AACACACCGTATTTATTTTG-AAAATTAGAACAGGTGGGCA---CTGGTTCCCAGCA----TGCTGCACTGCA-CAATACTGCTGGGAAACAGATTTGTCAAA-------------CTTCTCTTGCGTATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATA---TATT---CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATG-----ATT----TTT---GT-TC--A-TTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAA-----AAT---AAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|3 : ATTAAATTAA----------------------AGCACTTTTAAA--------T-----------G-----AT-----T------TTTGTTCAT-----TTTCAAGCACTTTcg
gi|6 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaAAATTCA----------------------ACCACTTTTCAA--------T-----------G-----AT-----T------TTTGTTCAT-----TTTCAAGCACTTTcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|5 : aattattagaaaaacattaaaatttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttttttttacaagttcagttagtttcacacagccaagtactccctcagcccttaatgtttcagatcaacctttgcatcccattgtttaccaatttctttgtactacacaagtttatcttgtactcaattgcgaattgtcggcatggactttccatttttattgtgtttctcgctcttatcctgcgacttcagggctgaatacacattttttccgaggcattgttatctgtttattactaccatgtgcttttggatacagtgggtttccccagatgacgtcactagttcagaacacaagcagctgcttaattgcatttgaacctgttctctgtattttgctgttgtcaaacgggtgctatcggcaatttttctgcgcgatttatgagagaattatttatcaactgtgttaaatttgttaaggcgacaacaaaccttatctattttaaaaattagaacaggtacgcactggttcccagcatgctgcactgcacaatactgctgggaaatagatttgtcaaattgagtagtctcccttctcttgcatatagtaaaacacggagtaaaataaatggtgaagatggacatttcatatattccgtttctattttttaaatacaaactcttttAAATTCA----------------------AGCACTTTTCAA--------T-----------G-----ATTTTTGT------T-----CAT-----TTTCAAGCACTTTtcaagctcttttcccactgacattaaaaataagcactattcaaggatgtttttaagaaataagcacttttcgtttgagaggttgaaaatcaagcacttttcaaatctgcaaaccttg
gi|8 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatactcccactccctgatttcaagaaaaaaatatatttttacaatttcagttagtttacacagccaaatactccgtcagccctaaatgtttcagattaacctatgcatcccatttattaccaatttctttgtactaaacaagtttatcttgtgctcatttgtgaattgcatggacatttcatttttcttatgtttctcgctcttatcgtgcgacttcagggctgaatacattctttctctgaggcattgttatctgtttaattttgattaaaacattgggtatccacagatgacatcactagttcggaacacaagcagctgttattgcatttgattctgttctctgtattttggggttgtcaaaagggtgttatcggcaatttttctgcgcgggttattagagaattatttatcaattgcgttaagtttgtttagacgacaacacaccatatcttttttttaaaattagaacaggtgcgcactggttcccagcatgctgcactgcacaatactgctgggaaacagatttgtcaaattgagtagtctcccttctcttgcatatagtaaaacatggagttaaataaatggtgaagatggacatttcatatagtattacaccgtaactattttttaaattcaaattcttttAAATTCA----------------------AGCAATTTTCAA--------T-----------G-----AT-----TTTTTTAT-----CAA-----TTTTAAGCATTTTttaagcacttttcccacagacattaaaaataagcactattcaaggatgtttttaagaaatgagcactttcattagagaggttgaaaataaagcacttttcaaatctgtacgaaccttgta
gi|9 : ttttttttttacattttagtttgttttacacagccaagtaattcctcaacctgcaatgtctttgcattccattatttaccaatttctttgtactgcacatgttgattctgtgctcatttgcgaattgtcggcatggacatttcattttccttgtgtttctctgtcttatcgttcgactttacggccaaatacacactttctctgaggcattgctatccgtttattactaccacactgggtttccccagatgacgtcactagttcagaacacaatcagctgttaaattgcatttgattctgttctctgtattttgggtgttatcggcaaattttctgcgcgggttatgggagaattatttatcaactgcgttaagtttatgcaattttttgtttagacaacaactaaccgtatctatttttaaaattagaacaggtgtgcattggttcccagcatgctgcactgcacaatactgctcggaaacagatttgtcaaactgagtagtctcccttctcttgcatatagtaaaacacagagtaaaataaatggcgaagatggacatttcatattctatgttactgttttttaaattcaaactcttttAAATTCA----------------------AGCACTTTTCAATGATTTTTG-----------TTC--ATT-----T------T-----CAAGTACCTTTCAAGCACTTTtcaagcacttttcccactgacattaaaaataagcactattcaaggatgtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgcaaaccttgt
gi|11 : aatttcaaaaacaaaaaactcatgctctcagcgtttccaagaaattccaatcccatttcttaccaatttctttgtactacataagtttatcttgtgctcatttgcgaattgtcagcatgaacgtttcatttttcttatgtttcttgctattatcgtgcaatttcagggctgaatacacactttctcagaggcattgttatccgtttattttttataaaaacattgggtttccccagatgacgtcactagttcagaccacaagcagctgttattgtatttgattctgttctctgtattttggggttgtatttatggtgttattggcaatttttctgcgggggttatgggagaattagtttaaacgacaacacatcgtatctatttttaaaattagaacaggtatgcactggttccaagcatgctgcactgcacaatactgctgggaaacagacttgtcaaattgagttgtctcccttctcttgcatatagtaaaataaggagttaaataaatggcgaagctggacatttcataatatactccattattattttttaaattcaaactgttttAAATTCA----------------------AGCACTTTTCAATGATTTTTG-----------TTC---ATTTTTGT------T-----CAT-----TTTTAAGCACTTTtcccactgacattaaaaagaagcactattcaaggatgtttttaagaaataatcacttttcatttgaaatctgtgtgaaccttgtttaa
gi|3 : taaagtctttattatactatataaagggataaagaatagatatatatacattgcaactatctcagctgtctctcccaataaagataacttaaacatatgaacagcaacataagaccataataaatcaattcatattctgttacttttttttaaaattcaaactcttttAAAAT-----T------T-----CAA-----TTTCAAACACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTACGAGTTCCTGCACAGCTGTCCACAGCGGCCAGT-T-ACAATATttaactgatattacaaatgagcactattcaaggacatttttaagaaataagcacttctcatttgaaaggttgaaaatcaagctct
gi|7 : aggtaaTATATTAACTCACAATACATACTTACATGCATCTTACCAGTCCCTG-A-AACTAC----AGGGGCTatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|2 : atACAGCT--------GGGCTAGTTACACAATATTG---TAACTATCCCA--ATACTGT-TA-CTAGCCCCTCTGATA--GCTGTtgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|12 : gactgataaaattcaagcacttttcaagcacttttcaaggtcaaaattttaatttgaagcacttaaatagatgaactcgccatacatacttactgtaccttaggagttcctgcACAGCT--------GGGCTAGTTACACAATATTG---TAACTATCCCA--ATACTGT-TA-CTAGCCC-------atatcccaataaagataacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagaaaattattagaaaaacatcaaaatttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttttttacaagttcagttagtttcacacaaccaagtactcccacagcccttaatgtttcagatcaacctttgcatcccattgtttaccactttctttgtactatacaagtttatcttgtgctcaattgcgaattgtcggcatggacgttccatttttattgtgtttctcgctcttatcccgcgacttcagggctgtatacacattttttccgaggcattgttatctgtttattactaccatgtgcttttggatgcagtgcgtttccccagatgacgtcactagttcagaacacaagcagctgctaaattgcatttgaacctgttctctgtattttggggttgtcaaacgggtgctatcggcaattttttctgcgtgggtaacgagagaattatttatcaactgtgttaaatttgttaaggcgacaacacaccgtatttattttgaaaattagaacaggtgggcactggttcccagcatgctgcactgcacaatactgctgggaaacagatttgtcaaacttctcttgcgtatagtaaaacacggagtaaaataaatggtgaagatggacatttcatatattccgttactattttttaaattcaaactcttttaaattcaagcacttttcaatgatttttgttcattttcaagcacttttcaagcacttttcccactgacattaaaaataagcactattcaaggatgtttttaagaaataagcacttttcatttgagaggttgaaaatcaagcacttttcaaatctgtgcgaaccttgcg
gi|2 : cagggttcatacagataaggactgataaaattcaagcacttttcaagcacttttcaagcacttttcaaggtcaaaatttcaatttcaagcattaaaatagatgaactcgccaaacatacttactgtaccttaggagttcctgcgcagctatccgag-ACAGC--TGGGCTAGTTA---CACAATATTGT--AACTATCCC-------AATACTGTctattccaataaagacaatgtaaacatatgaacagcaacat
gi|12 : gactgataaaattcaagcacttttcaagcacttttcaaggtcaaaattttaatttgaagcacttaaatagatgaactcgccatacatacttactgtaccttaggagttcctgcacagctatcagaggggctagta-ACAGC--TGGGCTAGTTA---CACAATATTGT--AACTATCCC-------AATACTGTatatcccaataaagataacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagaaaattattagaaaaacatcaaaatttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttttttacaagttcagttagtttcacacaaccaagtactcccacagcccttaatgtttcagatcaacctttgcatcccattgtttaccactttctttgtactatacaagtttatcttgtgctcaattgcgaattgtcggcatggacgttccatttttattgtgtttctcgctcttatcccgcgacttcagggctgtatacacattttttccgaggcattgttatctgtttattactaccatgtgcttttggatgcagtgcgtttccccagatgacgtcactagttcagaacacaagcagctgctaaattgcatttgaacctgttctctgtattttggggttgtcaaacgggtgctatcggcaattttttctgcgtgggtaacgagagaattatttatcaactgtgttaaatttgttaaggcgacaacacaccgtatttattttgaaaattagaacaggtgggcactggttcccagcatgctgcactgcacaatactgctgggaaacagatttgtcaaacttctcttgcgtatagtaaaacacggagtaaaataaatggtgaagatggacatttcatatattccgttactattttttaaattcaaactcttttaaattcaagcacttttcaatgatttttgttcattttcaagcacttttcaagcacttttcccactgacattaaaaataagcactattcaaggatgtttttaagaaataagcacttttcatttgagaggttgaaaatcaagcacttttcaaatctgtgcgaaccttgcg
gi|10 : cagggttcatacagataaggactgataaaattcaagcacttttcaagcacttttcaagcacttttcaaggtcaaaatttcaatttcaagcattaaaatagatgaactcgccaaacatacttactgtaccttaggagttcctgcgcagctatccgaggggctagta-ACAGC--TGGGCAAGTTA---CACAATATTGT--AACTAGCCC-------ctattccaataaagacaatgtaaacatatgaacagcaacat
gi|13 : cagggttcatacagattaggacctataaaattcaagcacttttcaagcacttttcaaggtcaaaatttcaatttcaagcactaaaatagatgaactcgacatacatacttactgtatcttaggagttcctgcacaactatccgag-ACAGC--TGGGCTAGTTA---CACAATATTGT--AACTAGCCCCTCGGCTA--GCTGTctctcccaataaagacaacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttattagaaaaacatcaaaatt
gi|11 : cagggttcatacatgtaaggactgataaaattcaagcacttttcaagcacttttcaagatcaaaatttcaatttcaagcactaaaatagatgaactcgccatatatacttactgtaggagttcctgcGAATAGATA---TAT-ATACATTGCAACTATCTC-------A--GCTGTCTCTCCCAATAAAGATAACTTAAACATATG---AACAGCA--ACATActctcccaataaagacaatgtaaacatatgaacagtaaca
gi|3 : taaagtctttattatactatataaagggataaaTGAAACTAGCCCCTGTGC-A--GCTGTCTCTCCCGATAAAGATAACTTCAACATATG---AACAGCA--ACATAagaccataataaatcaattcatattctgttacttttttttaaaattcaaactcttttaaattcaagcacttttcaatgatttttgttcatttttgttcatttttaagcactttttaactgatattacaaatgagcactattcaaggacatttttaagaaataagcacttctcatttgaaaggttgaaaatcaagctct
gi|7 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaaGTAACTTGC---------A--GTTATCTCTCCAAA-AAATAGAACTTAAACATATG---AACAGCA--Atgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|4 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactaTAACTAGCCG-------G--GCTGTCTCTCCAAATAAAGATAACTTAAACATATC---AACAGCA--ACA---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTAGAAAAACATCGAAATTTagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|6 : aTTATTAGAAAAACATTAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTACTCAATTGCGAATTGTCGGCATGGACTTTCCATTTTTATT--GTGTTTC------TCGCT--------CTTATCCTGCGACTTCAGGGCTGAATACACATTTTTTCCGAGGCATTGTTATCTGTTTATTACTACCATGTGCTTT-TG-----------GATACAG-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTTAATTGCATTTGAACCTGTTCTCTGTATTTTGCTGTTGTCAA---ACGGGTGCTA---TCG-GCAA-TTTTTCTGCGCGATTTATGAGAGA-AT------TATTTATCAACTGTGTTAA--------ATTT------------GTT-------AAGGCG----AC----AACAAACCTTATCTATTTTA-AAAATTAGAACAGGTACGCA---CTGGTTCCCAGCA----TGCTGCACTGCA-CAATACTGCTGGGAAATAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATA---TATT---CCGTTTCTATTTTTTAAA-TACAAACTCTTTTAAATTC-----AACCACTTTTCAATG-----ATT----TTT---GT-TC--A-TTTTCAAGCACTTTTCAAGCTCTTTTCCCACTGACATTAAA-----AAT---AAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCGTTTGAGAGGTTGAAAATCAAGCACTTTTCAAATC--TGCAAACCTTGtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagtttatcttgtgctcatttgcgaattgacggcatagacactttcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|10 : aaTTATTAGAAAAACATCAAAATT
gi|4 : cagggttcatacagattaggacctataaaattcaagcacttttcaagcacttttcaaggtcaaaatttcaatttcaagcactaaaatagatgaactcgacatacatacttactgtatcttaggagttcctgcacaactatccgaggggctagttacaatattgtgtaacttgcccagctgtctctcccaataaagacaacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTAT-TTTTTTTACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGT-------------------CTTTGCA-TCCCATTTTTGACCAGTTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGACGGCATAGAC
gi|3 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaTTAT-TTTTTTTACAAGTTCATTTAGTTTCATACAGACAAGTACTCCCTCA-TCCCTTAATGTTTC--AACTGAA---CAACCTTTGCA-TACCACTTATTAGCAATTTCTTTGTACTACAAAAGTTTATCTTGTGCTCATTTG-GAATTGTTGGCATGGAAG-----TTTTTCTT--GGGTTTC------Tactttcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|7 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaaTTTT-TTTTTTTACAAGTTCAGTTAGTTCCACACAGACAAGTTCTCCCTCA-GCCCTTAATGTTTC--A---ACTTAACGACCTTTGCA-TCCAATTTTTCAGCAATTTCTTCATACTGCACAAGTTTTTCCTGTGCTCTTTTGCG-ATTGTTGACATGGACATTTAATTTTTCTT--GCATTTC------TCCCT--------CTTACCCTGTGATTTCTGGGCtcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|14 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaatttTTTT-TTTTTTTACA-TTTTAGTTTGTTTTACACAGCCAAGTAATTCCTCA-ACCTGCAATGT-------------------CTTTGCA-TTCCATTATTTACCAATTTCTTTGTACTGCACATGTTGATTCTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTCCTT--GTGTTTC------actctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|8 : tttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaattTTT-TTTTTTTACA-TTTTAGTTTGTTTTACACAGCCAAGTAATTCCTCA-ACCTGCAATGT-------------------CTTTGCA-TTCCATTATTTACCAATTTCTTTGTACTGCACATGTTGATTCTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTCCTT--GTGTTTC------TCTGT--------CTTATCGTTCGACTTTACGGCCAAATACACACTTTCTCTGAGGCATTGCTATCCGTTTATTACTACCA--------------------------CAC-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAATCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGG----------------TGTTA---TCG-GCAA-ATTTTCTGCGCGGGTTATGGGAGA-AT------TATTTATCAACTGCGTTAA--------GTTTATGCAATTTTTTGTT-------TAGACA----AC----AACTAACCGTATCTATTTTT-AAAATTAGAACAGGTGTGCA---TTGGTTCCCAGCA----TGCTGCACTGCA-CAATACTGCTCGGAAACAGATTTGTCAAACTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACAGAGTAAAATAAATGGCGAAGATGGACATTTC---ATA---TTCT---ATGTTACTGTTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCAATTTTCAATG-----ATT----TTT---TTATC--A-ATTTTAAGCATTTTTCAAGCACTTTTCCCACTGACATTAAA-----AAT---AAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCAAACCTTG
gi|5 : TTTTTACAATTTCAGTTAGTTT-ACACAGCCAAATACTCCGTCA-GCCCTAAATGTTTC--A---GAT---TAACCTATGCA-TCCCATTTATTACCAATTTCTTTGTACTAAACAAGTTTATCTTGTGCTCATTTGTGAATTG----CATGGACATTTCATTTTTCTT--ATGTTTC------TCGCT--------CTTATCGTGCGACTTCAGGGCTGAATACATTCTTTCTCTGAGGCATTGTTATCTGTTTAAT-------TTTGATT---------------AAAACAT-----TGGGTATCCACAGATGACATCACTAGTTCGGAACACAAGCAGCTGTTA--TTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---AAGGGTGTTA---TCG-GCAA-TTTTTCTGCGCGGGTTATTAGAGA-AT------TATTTATCAATTGCGTTAA--------GTTT------------GTT-------TAGACG----AC----AACACACCATATCTTTTTTTTAAAATTAGAACAGGTGCGCA---CTGGTTCCCAGCA----TGCTGCACTGCA-CAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACATGGAGTTAAATAAATGGTGAAGATGGACATTTC---ATATAGTATTACACCGTAACTATTTTTTAAA-TTCAAATTCTTTTAAATTC-----AAGCACTTTTCAATG-----ATT----TTT---GT-TC--A-TTTTCAAGCACTTTTTAAGCACTTTTCCCACAGACATTAAA-----AAT---AAGCACTATTCAAGGATGTTTTTAAGAAATGAGCAC-TTTCATTAGAGAGGTTGAAAATAAAGCACTTTTCAAATCTGTACGAACCTTGt
gi|9 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatactcccactccctgatttcaagaaaaaaatataCTCATGCTCTCAGCGTTTCCAA---GA-----AA---TTCCAATCCCATTTCTTACCAATTTCTTTGTACTACATAAGTTTATCTTGTGCTCATTTGCGAATTGTCAGCATGAACGTTTCATTTTTCTT--ATGTTTC------TTGCT--------ATTATCGTGCAATTTCAGGGCTGAATACACACTTTCTCAGAGGCATTGTTATCCGTTTATT-----------TTTTATA-----------AAAACAT-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGACCACAAGCAGCTGTTA--TTGTATTTGATTCTGTTCTCTGTATTTTGGGGTTGT--ATTTATGG-TGTTA---TTG-GCAA-TTTTTCTGCGGGGGTTATGGGAGA-AT------TA----------GT-TTAA--------A-----------------------------CG----AC----AACACATCGTATCTATTTTT-AAAATTAGAACAGGTATGCA---CTGGTTCCAAGCA----TGCTGCACTGCA-CAATACTGCTGGGAAACAGACTTGTCAAATTGAGTTGTCTCCCTTCTCTTGCATATAGTAAAATAAGGAGTTAAATAAATGGCGAAGCTGGACATTTCATAATA---TACT---CCATTATTATTTTTTAAA-TTCAAACTGTTTTAAATTC-----AAGCACTTTTCAATG-----ATT----TTT---GT-TC--A-TTTTCAAGTACCTTTCAAGCACTTTTCCCACTGACATTAAA-----AAG---AAGCACTATTCAAGGATGTTTTTAAGAAATAATCACTTTTCATTTGAAAta
gi|15 : aatttcaaaaacaaaaaa-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACAAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGATGTTCCATTTTCATT--ATGTTTC------TCGCT--------CTTATtctgtgtgaaccttgtttaa
gi|3 : TTTTTATTCTGGGTTTCATTGACTCGCTTATATTGACTTAGCCAGC-----CATGGCTGAAAACACACTTTCCCTGAGGCATTGTTATCCCTTTATTACTACCATATGCTTT-T------------GATAAAAACAT-TGGATTTCCCCAGATGACGTCACTAGTTCAGAA-------AACT---------CATTTGATTCTTTTCTCTGTATTTTGGGGTTGTCAT---AAGAGCATTATGTTCATGC-A-TTTGTTAGGGGGGAAGACGAAAAACATGCTG--TATCTAT
gi|4 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttcTC------TTGTG--------CTCATT-TGCGAATTGACGGC---ATAGACACTTTCTTCGAGGCATTGTTATCCGTTTATTACTACCATGTGCTTT-TG-----------GACACAT-----TAGGTTTCCCCAGATGACATCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTTGGG----------------TGTTA---TTG-GCAA-TTTTTCTGCGCAGGTTATGGGAGA-AT------TATTTATCAACTGCGTTAA--------GTTTATGCAATTGTTTGTT-------TAGACG----AC----AACACAC-------ATTTTT-AAAATAAGAACAGGTGCACA---CTGGTTCCCAGCA----TGCTGCACTGCA-CAATACTGCTGGGAAACAGGTTTGCCAAATTGAGCAGTCTCCCTTCTCTTGCATAAAGTAATATAGGGAGTAAAATAAATGGCGAAAATGGACATTTC---ATA---TTCT---CCATTACTGTTTTTTAAA-TTCAAACTCTTTCAAGCTCTTTTAAAGTACTTTTCGATG-----ATC----TTT---GT-TC--A-TTTTCAAGCACTTTTC----------CCCACTGACATTAAA-----AAT---AAGCACTATTTAAGGAAGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGAGAACCTTGttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|7 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagtttaCACGGCTGCATACACACTTTC----AGGGA--GGTATC-----ATT--TTCCATTCACTTT-TGATCAAAACGAGGATACAAGTCAATGGGTTTTCCAAGTTGACATCACTAGTTCCGAACACATGCAGCTGTTCAATTTCATTTGA---TTCTCTCTATATTAAGGGGTTTTCAT---AGGGCTATTA---TCA-GCAA-CTTTTCTGCGCAGGTTATGGGAGA-ATTACATGTATTTATCACCTCCGTTAAGTTCATGCATTT------------GTTACGAGAAAAGATG----AA----AACATGCTGCATTTATTTTT-AGAATTAGAAca
gi|3 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagcAGAGC-AT------TATGT-TCA----TGC-----------ATTT------------GTT-------AGGGGGGAAGACGAAAAACATGCTGTATCTATTTTT-AAAATTAGAAGAGGTGCGCA---CTGGTTGCCAGCA----TATTGCTCTGCA-CAATAATGCTGGTAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCCCTTGCATATAATAAAACACGGAGTAAAATAAATGGAGAATATGGACATTTC---A-A-----------------------TTAAA-TTAAAGCACTTTTA---------------------AATG-----ATT----TTT---GT-TC--A-TTTTCAAGCAC------------TTTCCCACTCACATTAAT-----AAT---AAGCACTATTTAAGGTGGATTTTAAGAAATAAGCACTTCTCATCTGAGAAGTTGAAAATCAAGCACTTTTCTAATCTCTGCAAACCTTG
gi|4 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataGGCAAACCTGTTTCCCAGCAGTATTG-TGCAGTGCAGCA----TGCTGGGAACCAG
gi|2 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagtttatcttgtgctcatttgcgaattgacggcatagacactttcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcaca---CTGTTTCCCAGCAGTATTG-TGCAGTGCAGCA----TGCTGGGAACCAGaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|5 : gactgataaaattcaagcacttttcaagcacttttcaaggtcaaaattttaatttgaagcacttaaatagatgaactcgccatacatacttactgtaccttaggagttcctgcacagctatcagaggggctagtaacagtattgggatagttacaatattgtgtaactagcccagctgtatatcccaataaagataacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagaaaattattagaaaaacatcaaaatttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttttttacaagttcagttagtttcacacaaccaagtactcccacagcccttaatgtttcagatcaacctttgcatcccattgtttaccactttctttgtactatacaagtttatcttgtgctcaattgcgaattgtcggcatggacgttccatttttattgtgtttctcgctcttatcccgcgacttcagggctgtatacacattttttccgaggcattgttatctgtttattactaccatgtgcttttggatgcagtgcgtttccccagatgacgtcactagttcagaacacaagcagctgctaaattgcatttgaacctgttctctgtattttggggttgtcaaacgggtgctatcggcaattttttctgcgtgggtaacgagagaattatttatcaactgtgttaaatttgttaaggcgacaacacaccgtatttattttgaaaattagaacaggtgggca---CTGTTTCCCAGCAGTATTG-TGCAGTGCAGCA----TGCTGGGAACCAGatttgtcaaacttctcttgcgtatagtaaaacacggagtaaaataaatggtgaagatggacatttcatatattccgttactattttttaaattcaaactcttttaaattcaagcacttttcaatgatttttgttcattttcaagcacttttcaagcacttttcccactgacattaaaaataagcactattcaaggatgtttttaagaaataagcacttttcatttgagaggttgaaaatcaagcacttttcaaatctgtgcgaaccttgcg
gi|6 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatactcccactccctgatttcaagaaaaaaatatatttttacaatttcagttagtttacacagccaaatactccgtcagccctaaatgtttcagattaacctatgcatcccatttattaccaatttctttgtactaaacaagtttatcttgtgctcatttgtgaattgcatggacatttcatttttcttatgtttctcgctcttatcgtgcgacttcagggctgaatacattctttctctgaggcattgttatctgtttaattttgattaaaacattgggtatccacagatgacatcactagttcggaacacaagcagctgttattgcatttgattctgttctctgtattttggggttgtcaaaagggtgttatcggcaatttttctgcgcgggttattagagaattatttatcaattgcgttaagtttgtttagacgacaacacaccatatcttttttttaaaattagaacaggtgcgcaTTCCCAGCAGTATTG-TGCAGTGCAGCA----TGCTGGGAACCAGatttgtcaaattgagtagtctcccttctcttgcatatagtaaaacatggagttaaataaatggtgaagatggacatttcatatagtattacaccgtaactattttttaaattcaaattcttttaaattcaagcacttttcaatgatttttgttcattttcaagcactttttaagcacttttcccacagacattaaaaataagcactattcaaggatgtttttaagaaatgagcactttcattagagaggttgaaaataaagcacttttcaaatctgtacgaaccttgta
gi|11 : aattattagaaaaacattaaaatttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttttttttacaagttcagttagtttcacacagccaagtactccctcagcccttaatgtttcagatcaacctttgcatcccattgtttaccaatttctttgtactacacaagtttatcttgtactcaattgcgaattgtcggcatggactttccatttttattgtgtttctcgctcttatcctgcgacttcagggctgaatacacattttttccgaggcattgttatctgtttattactaccatgtgcttttggatacagtgggtttccccagatgacgtcactagttcagaacacaagcagctgcttaattgcatttgaacctgttctctgtattttgctgttgtcaaacgggtgctatcggcaatttttctgcgcgatttatgagagaattatttatcaactgtgttaaatttgttaaggcgacaacaaaccttatctattttaaaaattagaacaggtacgcaA---TATT---CTGTTACTTTTTTTTAAAATTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATG-----ATT----TTT---GT-TC--A-TTTTTGTTCATTTTT-AAGCACTTTTTA-ACTGATATTACA-----AAT---GAGCACTATTCAAGGACATTTTTAAGAAATAAGCACTTCTCATTTGAAAGGTTGAAAATCAAGCTCTatagatttgtcaaattgagtagtctcccttctcttgcatatagtaaaacacggagtaaaataaatggtgaagatggacatttcatatattccgtttctattttttaaatacaaactcttttaaattcaaccacttttcaatgatttttgttcattttcaagcacttttcaagctcttttcccactgacattaaaaataagcactattcaaggatgtttttaagaaataagcacttttcgtttgagaggttgaaaatcaagcacttttcaaatctgcaaaccttg
gi|12 : taaagtctttattatactatataaagggataaagaatagatatatatacattgcaactatctcagctgtctctcccaataaagataacttaaacatatgaacagcaacataagaccataataaatcaattcAAA-TTCAAGCACTTTT-----C-----AAGCACTTTTCAAGC-----ACT----TTTCAAGG-TCAAA-ATTTCAA-----TTTCAAGCATT
gi|10 : cagggttcatacagataaggactgataAAA-TTCAAGCACTT-----TTC-----AAGCACTTTTCAAGGTCAAAAT------------T-TC--A-ATTTCAAGCACTaaaatagatgaactcgccaaacatacttactgtaccttaggagttcctgcgcagctatccgaggggctagtaacagtattgggatagttacaatattgtgtaactagcccagctgtctattccaataaagacaatgtaaacatatgaacagcaacat
gi|13 : cagggttcatacagattaggacctataAAA-TTCAAGCACTT-----TTC-----AAGCACTTTTCAA-G-----ATCAAAAT------T-TC--A-ATTTCAAGCACTaaaatagatgaactcgacatacatacttactgtatcttaggagttcctgcacaactatccgaggggctagttacaatattgtgtaacttgcccagctgtctctcccaataaagacaacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttattagaaaaacatcaaaatt
gi|12 : cagggttcatacatgtaaggactgataAAATTC-----AAGCACTTTTCAA-G----------------------C--ACTTTTCAAGCACTTTTCAAGaaaatagatgaactcgccatatatacttactgtaggagttcctgcacagctagccgaggggctagttacaatattgtgtaactagcccagctgtctctcccaataaagacaatgtaaacatatgaacagtaaca
gi|10 : cagggttcatacagataaggactgataAAATTC-----AAGCACTTTTCAAGC-----ACT----TTTCAAGG-TCAAA-ATTTCAA-----TTTCAAGCACTgtcaaaatttcaatttcaagcattaaaatagatgaactcgccaaacatacttactgtaccttaggagttcctgcgcagctatccgaggggctagtaacagtattgggatagttacaatattgtgtaactagcccagctgtctattccaataaagacaatgtaaacatatgaacagcaacat
gi|13 : cagggttcatacagattaggacctataAAATTC-----AAGCACTTTTCAAGC-----ACT----TTTCAAGA-TCAAA-ATTTCAA-----TTTCAAGCACTaaaatagatgaactcgacatacatacttactgtatcttaggagttcctgcacaactatccgaggggctagttacaatattgtgtaacttgcccagctgtctctcccaataaagacaacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttattagaaaaacatcaaaatt
gi|12 : cagggttcatacatgtaaggactgataTTCAAGCACTTTTCAAGCACTTTTC-------------------------AAGCACTTTTCAAGGaaaatagatgaactcgccatatatacttactgtaggagttcctgcacagctagccgaggggctagttacaatattgtgtaactagcccagctgtctctcccaataaagacaatgtaaacatatgaacagtaaca
gi|10 : cagggttcatacagataaggactgataaaaTTCAAGCACTTTTCAAGCACTTTTCtcaaaatttcaatttcaagcattaaaatagatgaactcgccaaacatacttactgtaccttaggagttcctgcgcagctatccgaggggctagtaacagtattgggatagttacaatattgtgtaactagcccagctgtctattccaataaagacaatgtaaacatatgaacagcaacat
gi|13 : cagggttcatacagattaggacctataaaaTTCAAGCACTTTTCAAGCACTTTTC-----AAGATCAAAATTTCAATTTCAAGCACTAaaggtcaaaatttcaatttcaagcactaaaatagatgaactcgacatacatacttactgtatcttaggagttcctgcacaactatccgaggggctagttacaatattgtgtaacttgcccagctgtctctcccaataaagacaacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttattagaaaaacatcaaaatt
14 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|16 ): AGGCTAGTGTCGATATATATTTCATATCTATATCCCTATATATAGTATAATAAAGACTCTTATTCTATATATAGGGATATAGCTATAAAATGCATGTTTATTGACACTAGCTTCTGTG
Unaligned ( gi|17 ): ACAGCGGCTTGTCACAATATATGTTCTATATTCTATATATAGTATAATCAAGTTTTTATTATCCTAAATATAGGGATATAGAATATATATTGTCACTATCCCCTGTG
Unaligned ( gi|18 ): ATAGGGGCTAGTGACAATGCATATTCTATATCCCCAGTATATACGAGTATAATATTATATTATACATAGGGATGTAGACTATATATTGCCACTAGCCCCTGT
Unaligned ( gi|19 ): ATAGGGACGAGTGACAATATATCTTTATATCCCTATATATAGTATAATAAAGACTTTATATAGGGATATATAAAAATATGTATTGTTAAACCCCTGTG
Unaligned ( gi|20 ): CACAGGTTCCAGTCACAATATATATTCTATATCCCTGTACATGGTATAATCTTTATAAGGATATAGCATATATAATTTGTCACTAACCCCTGT
Unaligned ( gi|21 ): ATATATATTCTAAATTCCTATATATAGTATTATAAAGACTATTAAACTATATATAGGGATATAGAATATATCTTTTGTAACTAACCCTG
Unaligned ( gi|22 ): CAAGGGCTGGTAACAATATATATTCTATATTCCTATATATAGTATACATAGGGATATAAAATATATATTGGCACTAGCCCCTGT
Unaligned ( gi|23 ): AGTGGCAAGTGTCAATATACATTTTATATCCCTATACTTTATATAAAAATATAAAATGTGTATTGACACTTGCCCCTG
Unaligned ( gi|24 ): ATAAAATGTAATAATTTGTTCAAAAGAACAGCTTAGACAAGTACATATCAATTTTACCATGCATATCT
Unaligned ( gi|25 ): TAAAGACTCTTATTATATTATATACTGGCATAATAATATACATGTATATAGTCACTAGCCCCT
Unaligned ( gi|26 ): TACAATATATAATTATTCTATATCCCTATATATATTATACTAAAGACAAAGGTA
Unaligned ( gi|27 ): CCGCGGCTAATGGCAGTATATATTTCATATTTCTATATAAAGTATAATAAAGAC
Unaligned ( gi|28 ): CAACATCAAAAGGGCTAGTGTCAATATATAGTTTATATCTATATCCCTATACTA
Unaligned ( gi|29 ): CACAGGGGCTAGTGTCCATATACACTTTATATCCCTATTTATAT
Alignments
lowQualScore : 11111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22222222222222222222222222222222222 33333333333 555555555555555555 111111 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 444444444444444444444444444444444444444444444 1111111111111 111111 1111111111 11111111111111111111111 111111 11111111 111111 11111111 444444444444 11111111 4 4 1111111111111 11111
lowQualScore : 88888888888888888888888888888888888 88888888888 99 5 0 0 5 1 555555555555555555 222222 1 1 777 777 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 99 555555555555555555555555555555555555555555555 5 22 3 4 8888888888888 1 3 1 0 44 3 111111 7777777 3 0 6666666666 1 4 4 55 4 777 4 3 99 77777777777777777777777 111111 4 1 00000000 3 4 9999 777 222222 1 66666666 555555555555 55555555 9999 9999 2 4 0 0 0 1 9999999999999 4 11111 4 1 0 2
lowQualScore : ................................... ........... .. . . . . . .................. ...... . . ... ... .......................................................................................................... .. ............................................. . .. . . ............. . . . . .. . ...... ....... . . .......... . . . .. . ... . . .. ....................... ...... . . ........ . . .... ... ...... . ........ ............ ........ .... .... . . . . . . ............. . ..... . . . .
lowQualScore : 00000000000000000000000000000000000 00000000000 33 7 1 7 7 0 666666666666666666 888888 7 1 888 888 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 00 000000000000000000000000000000000000000000000 0 99 6 4 2222222222222 4 6 0 5 66 1 999999 2222222 6 5 5555555555 0 0 0 55 0 000 0 4 55 77777777777777777777777 000000 6 1 44444444 9 4 4444 888 888888 8 11111111 666666666666 44444444 4444 4444 4 4 2 0 0 1 2222222222222 4 11111 4 0 1 7
consensus : CAGGGTTCATACAGATAAGGACTGATAAAATT----------------------CAAGCACTTTTCAAGCA-----------CTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCCG-AGGGGCTAGTNACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTC--ATTTT-TCTTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACACTTTCTCCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------ATTT------------GTTN-------AGGCG----AC----AACACACCGTATCTATTTTT-AAAATTAGAACAGGTGCGCACTGGTTCCCAGCA-TGCTGCACTGCA-CAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTCATA---TACT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
Reference ( family-6046 ) : CAGGGTTCATACAGATAAGGACTGATAAAATT----------------------CA-----------AGCA-----------CTTTTCAAGGTCAAAATTTCAATTTCAAGCACTTNAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCCG-AGGGGCTAGTNACAGCATTGGGCTAGTTACACATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGACAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAN-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAANTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTC--ATTTT-TCTTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACACTTTCTCCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ANGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------ATTT------------GTTN-------AGGCG----AC----AACACGCCGTATCTATTTTT-AAAATTAGAACAGGTGCGCACTGGTTCCCAGCAGTGCTGCACTGCAGCAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTCATA---TACT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCANTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|1 : CAGGGTTCATACAGATAAGGACTGATAAAATT----------------------CA-----------AGCA-----------CTTTTCAAGGTCAAAATTTCAATTTCAAGCACTTTAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCAG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTATATCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAACCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCACTTTCTTTGTACTACACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGACGTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCTGCGAATT---CAG----GGCTGTATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----GCAA-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTAAATTGCATTTGAACCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGCTATCAGCAA-TTTTTCTGCGT----GGATA---ACGAGAGAATTA------TTTATCAACTGTGTTAA--------ATTT------------GTTA-------AGGCG----AC----AACACACCGTATCTATTTTA-AAAATTAGAACAGGTAGGCACTGGTTCCCAGCA-TGCTGCACTGCA-CAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCGTATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTCATA---TATT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|10 : CAGGGTTCATACAGATTAGGACCTATAAAATT----------------------CAAGCACTTTTCAAGCA-----------CTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGACATACATACTTAC-TGTATCTTAGGAGTTCCTGCACAACTATCCG-AGGGGCTAGTTACA------------------ATATTGTGTAACTTGCCC------AGCTGTCTCTCCCAATAAAGACAACGTAAACATATGAA---CAGCA---ACATA
gi|10 : -TTATTAGAAAAACATCAAAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttattagaaaaacatcaaaatt
gi|11 : cagggttcatacagattaggacctataaaattcaagcacttttcaagcacttttcaaggtcaaaatttcaatttcaagcactaaaatagatgaactcgacatacatacttactgtatcttaggagttcctgcacaactatccgaggggctagttacaatattgtgtaacttgcccagctgtctctcccaataaagacaacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGATATATATACATTGCAACTATCTC------AGCTGTCTCTCCCAATAAAGATAACTTAAACATATGAA---CAGCA---ACATA
gi|11 : taaagtctttattatactatataaagggataaagaaCAATTCATA---T--T------CTGTTACTTTTTTTTAAAATTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTTGTTCATTTTT-AAGCACTTTTTA-ACTGATATTACAAATGAGCACTATTCAAGGACATTTTTAAGAAATAAGCACTTCTCATTTGAAAGGTTGAAAATCAAGCTCTagaccataataaatcaattcatattctgttacttttttttaaaattcaaactcttttaaattcaagcacttttcaatgatttttgttcatttttgttcatttttaagcactttttaactgatattacaaatgagcactattcaaggacatttttaagaaataagcacttctcatttgaaaggttgaaaatcaagctct
gi|12 : taaagtctttattatactatataaagggataaagaatagatatatatacattgcaactatctcagctgtctctcccaataaagataacttaaacatatgaacagcaacataagaccataataaatCAGGGTTCATACAGATAAGGACTGATAAAATTCAAGCACTTTTCAAGCACTTTTCA-----------AGCA-----------CTTTTCAAGGTCAAAATTTCAATTTCAAGCATTAAAATAGATGAACTCGCCAAACATACTTAC-TGTACCTTAGGAGTTCCTGCGCAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTATTCCAATAAAGACAATGTAAACATATGAA---CAGCA---ACAT
gi|13 : CAGGGTTCATACATGTAAGGACTGATAAAATT----------------------CAAGCACTTTTCAAGCA-----------CTTTTCAAGATCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATATATACTTAC-TG-----TAGGAGTTCCTGCACAGCTAGCCG-AGGGGCTAGTTACA------------------ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGACAATGTAAACATATGAA---CAGTA---ACA
gi|14 : TTTTT-TTTTTTTACA-TTTTAGTTTGTTTTACACAGCCAAGTAATTCCTCA-ACCTGCAATGT-------------------CTTTGCA-TTCCATTATTTACCAATTTCTTTGTACTGCACATGTTGATTCTGTGCTCATTTGCGAATTGTCGGCATGGACATTTC--ATTTT-CCTTGTGTTTC------
gi|15 : tttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaat-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACAAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGATGTTCC--ATTTT-CATTATGTTTC------TCGCT---CT--TAT
gi|2 : GACTGATAAAATT----------------------CA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTTAATTTGAAGCACTTAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCAG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTATATCCCAATAAAGATAACGTAAACATATGAACAGCAACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTACAAGTTCAGTTAGTTTCACACAACCAAGTACTCCCACA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCACTTTCTTTGTACTATACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGACGTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCCGCGACTT---CAG----GGCTGTATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----GCAG-----TGCGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTAAATTGCATTTGAACCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGCTATCGGCAATTTTTTCTGCGT----GGGTA---ACGAGAGAATTA------TTTATCAACTGTGTTAA--------ATTT------------GTTA-------AGGCG----AC----AACACACCGTATTTATTTTG-AAAATTAGAACAGGTGGGCACTGGTTCCCAGCA-TGCTGCACTGCA-CAATACTGCTGGGAAACAGATTTGTCAAA-------------CTTCTCTTGCGTATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTCATA---TATT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|3 : AAAATTTCAATTTCAAACACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTACGAGTTCCTGCACAGCTGTCCACAGCGGCCAGTTACAATATcg
gi|3 : aggtaaTGAAACTAGCCCCTGTGCAGCTGTCTCTCCCGATAAAGATAACTTCAACATATGAA---CAGCA---ACATAatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaaTTAT-TTTTTTTACAAGTTCATTTAGTTTCATACAGACAAGTACTCCCTCA-TCCCTTAATGTTTC--AACTGAA---CAACCTTTGCA-TACCACTTATTAGCAATTTCTTTGTACTACAAAAGTTTATCTTGTGCTCATTTG-GAATTGTTGGCATGGAAG-------TTTT-TCTTGGGTTTC------T-------------TCCTG--------------------GAA-----ACTTTCTCCTATGGCAGTAATGTCTATCTTTTTCACATACACTGCACCA---AGCTTTCTTT-T---T----ATTC-----TGGGTTTCtgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaaTTTC--TTTTTATTCTGGGTTTCATTGACTCGCT---TA--TATT----GACTTAGCCAGCCATGGCTGAAAACACACTTTCCCTGA-GGCA-T--TGT-TATCCCTTT---AT-TACT--ACCA---TA--TGCTTT-T-GATAAAAACAT-----TGGATTTCCCCAGATGACGTCACTAGTTCAGAA-------AACT---------CATTTGATTCTTTTCTCTGTATTTTGGGGTTGTCAT---AAGAGCATTATattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagc-TTTCTCTGTATTTTGGGGTTGTCATAAGAGCATTA------TGT-TCA--TGC-------------ATTT------------GTTA-------GGGGGGAAGACGAAAAACATGCTGTATCTATTTTT-AAAATTAGAAGAGGTGCGCACTGGTTGCCAGCA-TATTGCTCTGCA-CAATAATGCTGGTAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCCCTTGCATATAATAAAACACGGAGTAAAATAAATGGAGAATATGGACATTTCA-A--------------------------TTAAA-TTAAAGCACTTTTA---------------------AATGATTTTTGT-TCATTTTCAAGCAC------------TTTCCCACTCACATTAATAATAAGCACTATTTAAGGTGGATTTTAAGAAATAAGCACTTCTCATCTGAGAAGTTGAAAATCAAGCACTTTTCTAATCTCTGCAAACCTTGgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|4 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattctTAACTAGCCG------GGCTGTCTCTCCAAATAAAGATAACTTAAACATATCAA---CAGCA---AC--ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT-TTTTTAGAAAAACATCGAAATTT
gi|4 : aTTAT-TTTTTTTACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGT-------------------CTTTGCA-TCCCATTTTTGACCAGTTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGACGGCATAGACACTTtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagtttatcttgtgctcatttgcgaattgacggcatagacactttcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|4 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaTTTA-TCTTGTG---C------TCATT------------TGCGAATT---GAC----GGC---ATAGACACTTTCTTCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAC----ACAT-----TAGGTTTCCCCAGATGACATCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTTGGG----------------TGTTATTGGCAA-TTTTTCTGCGC----AGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------GTTTATGCAATTGTTTGTTT-------AGACG----AC----AACACAC-------ATTTTT-AAAATAAGAACAGGTGCACACTGGTTCCCAGCA-TGCTGCACTGCA-CAATACTGCTGGGAAACAGGTTTGCCAAATTGAGCAGTCTCCCTTCTCTTGCATAAAGTAATATAGGGAGTAAAATAAATGGCGAAAATGGACATTTCATA---TTCT------CCATTACTGTTTTTTAAA-TTCAAACTCTTTCAAGCTCTTTTAAAGTACTTTTCGATGATCTTTGT-TCATTTTCAAGCACTTTTC----------CCCACTGACATTAAAAATAAGCACTATTTAAGGAAGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGAGAACCTTGtcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|5 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagTTTTTACAATTTCAGTTAGTTT-ACACAGCCAAATACTCCGTCA-GCCCTAAATGTTTC--A---GAT---TAACCTATGCA-TCCCATTTATTACCAATTTCTTTGTACTAAACAAGTTTATCTTGTGCTCATTTGTGAATTG----CATGGACATTTC--ATTTT-TCTTATGTTTC------TCGCT---CT--TATCGTGCGACTT---CAG----GGCTGAATACATTCTTTCTCTGA-GGCA-T--TGT-TATCTGTTT---AA-T------------TT--TGATT----AAA----ACAT-----TGGGTATCCACAGATGACATCACTAGTTCGGAACACAAGCAGCTGTTA--TTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---AAGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATTAGAGAATTA------TTTATCAATTGCGTTAA--------GTTT------------GTTT-------AGACG----AC----AACACACCATATCTTTTTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCA-TGCTGCACTGCA-CAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACATGGAGTTAAATAAATGGTGAAGATGGACATTTCATA---TAGTATTACACCGTAACTATTTTTTAAA-TTCAAATTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTTAAGCACTTTTCCCACAGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATGAGCACTT-TCATTAGAGAGGTTGAAAATAAAGCACTTTTCAAATCTGTACGAACCTTGca
gi|6 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatactcccactccctgatttcaagaaaaaaatataAA-TTATTAGAAAAACATTAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTACTCAATTGCGAATTGTCGGCATGGACTTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAG-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTTAATTGCATTTGAACCTGTTCTCTGTATTTTGCTGTTGTCAA---ACGGGTGCTATCGGCAA-TTTTTCTGCGC----GATTT---ATGAGAGAATTA------TTTATCAACTGTGTTAA--------ATTT------------GTTA-------AGGCG----AC----AACAAACCTTATCTATTTTA-AAAATTAGAACAGGTACGCACTGGTTCCCAGCA-TGCTGCACTGCA-CAATACTGCTGGGAAATAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTCATA---TATT------CCGTTTCTATTTTTTAAA-TACAAACTCTTTTAAATTC-----AACCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCTCTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCGTTTGAGAGGTTGAAAATCAAGCACTTTTCAAATC--TGCAAACCTTGta
gi|7 : TATATTAACTCACAATACATACTTACATGCATCTTACCAGTCCCTG-A-AACTAC----AGGGGCT
gi|7 : atGTAACTTGC--------AGTTATCTCTCCAAA-AAATAGAACTTAAACATATGAA---CAGCA---Atgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|7 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactaTTTTT-TTTTTTTACAAGTTCAGTTAGTTCCACACAGACAAGTTCTCCCTCA-GCCCTTAATGTTTC--A---ACTTAACGACCTTTGCA-TCCAATTTTTCAGCAATTTCTTCATACTGCACAAGTTTTTCCTGTGCTCTTTTGCG-ATTGTTGACATGGACATTTA--ATTTT-TCTTGCATTTC------TCCCT---CT--TACCCTGTGATTT---CTG----GGCagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|7 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattTTTCTTGTTAT-TCTTG-GTTTCC-----TTGATGGACTGATATCC----ACTTAGCCAGCCACGGCTGCATACACACTTTCAGGGA-GGTA-T--CAT-TTTCCATTC---AC-TTTTG-ATCAAAACG--AG-------GAT----ACAAGTCAATGGGTTTTCCAAGTTGACATCACTAGTTCCGAACACATGCAGCTGTTCAATTTCATTTGATTCT---CTCTATATTAAGGGGTTTTCAT---AGGGCTATTATCAGCAA-CTTTTCTGCGC----AGGTT---ATGGGAGAATTACATGTATTTATCACCTCCGTTAAGTTCATGCATTT------------GTTACGAGAAAAGATG----AA----AACATGCTGCATTTATTTTT-AGAATTAGAAactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|8 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagcTTT-TTTTTTTACA-TTTTAGTTTGTTTTACACAGCCAAGTAATTCCTCA-ACCTGCAATGT-------------------CTTTGCA-TTCCATTATTTACCAATTTCTTTGTACTGCACATGTTGATTCTGTGCTCATTTGCGAATTGTCGGCATGGACATTTC--ATTTT-CCTTGTGTTTC------TCTGT---CT--TATCGTTCGACTT---TAC----GGCCAAATACACACTTTCTCTGA-GGCA-T--TGC-TATCCGTTT---AT-TACT--ACCA------------------------CAC-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAATCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGG----------------TGTTATCGGCAA-ATTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------GTTTATGCAATTTTTTGTTT-------AGACA----AC----AACTAACCGTATCTATTTTT-AAAATTAGAACAGGTGTGCATTGGTTCCCAGCA-TGCTGCACTGCA-CAATACTGCTCGGAAACAGATTTGTCAAACTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACAGAGTAAAATAAATGGCGAAGATGGACATTTCATA---TTCT------ATGTTACTGTTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCAATTTTCAATGATTTTTTTATCAATTTTAAGCATTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCAAACCTTG
gi|9 : CTCATGCTCTCAGCGTTTCCAA---GA-----AA---TTCCAATCCCATTTCTTACCAATTTCTTTGTACTACATAAGTTTATCTTGTGCTCATTTGCGAATTGTCAGCATGAACGTTTC--ATTTT-TCTTATGTTTC------TTGCT---AT--TATCGTGCAATTT---CAG----GGCTGAATACACACTTTCTCAGA-GGCA-T--TGT-TATCCGTTT---AT-T------------------TTTTATAAAA----ACAT-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGACCACAAGCAGCTGTTA--TTGTATTTGATTCTGTTCTCTGTATTTTGGGGTTGT--ATTTATGG-TGTTATTGGCAA-TTTTTCTGCGG----GGGTT---ATGGGAGAATTA-----------------------------------------------GTTT-------AAACG----AC----AACACATCGTATCTATTTTT-AAAATTAGAACAGGTATGCACTGGTTCCAAGCA-TGCTGCACTGCA-CAATACTGCTGGGAAACAGACTTGTCAAATTGAGTTGTCTCCCTTCTCTTGCATATAGTAAAATAAGGAGTTAAATAAATGGCGAAGCTGGACATTTCATAATATACT------CCATTATTATTTTTTAAA-TTCAAACTGTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGTACCTTTCAAGCACTTTTCCCACTGACATTAAAAAGAAGCACTATTCAAGGATGTTTTTAAGAAATAATCACTTTTCATTTGAAAt
14 sequences could not be aligned to this reference sequence:
Unaligned ( gi|16 ): AGGCTAGTGTCGATATATATTTCATATCTATATCCCTATATATAGTATAATAAAGACTCTTATTCTATATATAGGGATATAGCTATAAAATGCATGTTTATTGACACTAGCTTCTGTG
Unaligned ( gi|17 ): ACAGCGGCTTGTCACAATATATGTTCTATATTCTATATATAGTATAATCAAGTTTTTATTATCCTAAATATAGGGATATAGAATATATATTGTCACTATCCCCTGTG
Unaligned ( gi|18 ): ATAGGGGCTAGTGACAATGCATATTCTATATCCCCAGTATATACGAGTATAATATTATATTATACATAGGGATGTAGACTATATATTGCCACTAGCCCCTGT
Unaligned ( gi|19 ): ATAGGGACGAGTGACAATATATCTTTATATCCCTATATATAGTATAATAAAGACTTTATATAGGGATATATAAAAATATGTATTGTTAAACCCCTGTG
Unaligned ( gi|20 ): CACAGGTTCCAGTCACAATATATATTCTATATCCCTGTACATGGTATAATCTTTATAAGGATATAGCATATATAATTTGTCACTAACCCCTGT
Unaligned ( gi|21 ): ATATATATTCTAAATTCCTATATATAGTATTATAAAGACTATTAAACTATATATAGGGATATAGAATATATCTTTTGTAACTAACCCTG
Unaligned ( gi|22 ): CAAGGGCTGGTAACAATATATATTCTATATTCCTATATATAGTATACATAGGGATATAAAATATATATTGGCACTAGCCCCTGT
Unaligned ( gi|23 ): AGTGGCAAGTGTCAATATACATTTTATATCCCTATACTTTATATAAAAATATAAAATGTGTATTGACACTTGCCCCTG
Unaligned ( gi|24 ): ATAAAATGTAATAATTTGTTCAAAAGAACAGCTTAGACAAGTACATATCAATTTTACCATGCATATCT
Unaligned ( gi|25 ): TAAAGACTCTTATTATATTATATACTGGCATAATAATATACATGTATATAGTCACTAGCCCCT
Unaligned ( gi|26 ): TACAATATATAATTATTCTATATCCCTATATATATTATACTAAAGACAAAGGTA
Unaligned ( gi|27 ): CCGCGGCTAATGGCAGTATATATTTCATATTTCTATATAAAGTATAATAAAGAC
Unaligned ( gi|28 ): CAACATCAAAAGGGCTAGTGTCAATATATAGTTTATATCTATATCCCTATACTA
Unaligned ( gi|29 ): CACAGGGGCTAGTGTCCATATACACTTTATATCCCTATTTATAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 33333333333 111111 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 444444444444444444444444444444444444444444444 1111111111111 111111 1111111111 11111111111111111111111 111111 11111111 111111 11111111 444444444444 11111111 111111111 11111
lowQualScore : 88888888888 5 0 0 5 99999 1 0 1 6 222222 1 777 777 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 8 555555555555555555555555555555555555555555555 5 33 3 4 8888888888888 1 3 1 0 44 3 111111 7777777 3 0 6666666666 1 4 4 55 4 777 4 3 99 77777777777777777777777 111111 4 1 22222222 3 4 9999 777 222222 1 66666666 555555555555 55555555 9999 9999 4 0 1 777 555555555 4 11111 4 0 2
lowQualScore : ........... . . . . ..... . . . . ...... . ... ... .......................................................................................................... . ............................................. . .. . . ............. . . . . .. . ...... ....... . . .......... . . . .. . ... . . .. ....................... ...... . . ........ . . .... ... ...... . ........ ............ ........ .... .... . . . ... ......... . ..... . . .
lowQualScore : 00000000000 7 1 7 7 11111 0 6 0 7 888888 1 888 888 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 000000000000000000000000000000000000000000000 0 00 6 4 2222222222222 4 6 0 5 66 1 999999 2222222 6 5 5555555555 0 0 0 55 0 000 0 4 55 77777777777777777777777 000000 6 1 00000000 9 4 4444 888 888888 8 11111111 666666666666 44444444 4444 4444 4 2 1 888 000000000 4 11111 4 1 7
consensus : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTC--ATTTT-TCTTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACACTTTCTCCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATGGGAGAAT------TATTTATCAACTGCGTTAA--------ATTT------------GTT-------NAGGCG----AC----AACACACCGTATCTATTTT-TAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATACT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
Reference ( family-6046 ) : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCCG-AGGGGCTAGTNACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTC--ATTTT-TCTTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACACTTTCTCCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATGGGAGAAT------TATTTATCAACTGCGTTAA--------ATTT------------GTT-------NAGGCG----AC----AACACACCGTATCTATTTT-TAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATACT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|1 : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAG-----------GTCAAAATTTCAATTTCAAGCACTTTAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCAG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTATATCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAACCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCACTTTCTTTGTACTACACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGACGTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCTGCGAATT---CAG----GGCTGTATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----GCAA-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTAAATTGCATTTGAACCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGCTATCAGCAA-TTTTTCTGCGT----GGATA---ACGAGAGAAT------TATTTATCAACTGTGTTAA--------ATTT------------GTT-------AAGGCG----AC----AACACACCGTATCTATTTT-AAAAATTAGAACAGGTAGGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCGTATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATATATT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|10 : CAGGGTTCATACAGATTAGGACCTATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGACATACATACTTAC-TGTATCTTAGGAGTTCCTGCACAACTATCCG-AGGGGC-----------------TAGTTACA-ATATTGTGTAACTTGCCC------AGCTGTCTCTCCCAATAAAGACAACGTAAACATATGAA---CAGCA---ACATA
gi|10 : -TTATTAGAAAAACATCAAAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttattagaaaaacatcaaaatt
gi|11 : cagggttcatacagattaggacctataaaattcaagcacttttcaagcacttttcaaggtcaaaatttcaatttcaagcactaaaatagatgaactcgacatacatacttactgtatcttaggagttcctgcacaactatccgaggggctagttacaatattgtgtaacttgcccagctgtctctcccaataaagacaacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGAATAGATATATATACATTGCAACTATCTC------AGCTGTCTCTCCCAATAAAGATAACTTAAACATATGAA---CAGCA---ACATA
gi|11 : taaagtctttattatactatataaagggataaaCAATTC---ATAT--T------CTGTTACTTTTTTTTAAAATTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTTGTTCATTTTT-AAGCACTTTTTA-ACTGATATTACAAATGAGCACTATTCAAGGACATTTTTAAGAAATAAGCACTTCTCATTTGAAAGGTTGAAAATCAAGCTCTagaccataataaatcaattcatattctgttacttttttttaaaattcaaactcttttaaattcaagcacttttcaatgatttttgttcatttttgttcatttttaagcactttttaactgatattacaaatgagcactattcaaggacatttttaagaaataagcacttctcatttgaaaggttgaaaatcaagctct
gi|12 : taaagtctttattatactatataaagggataaagaatagatatatatacattgcaactatctcagctgtctctcccaataaagataacttaaacatatgaacagcaacataagaccataataaatCAGGGTTCATACAGATAAGGACTGATAAAATTCAAGCACTTTTCAAGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCATTAAAATAGATGAACTCGCCAAACATACTTAC-TGTACCTTAGGAGTTCCTGCGCAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTATTCCAATAAAGACAATGTAAACATATGAA---CAGCA---ACAT
gi|13 : CAGGGTTCATACATGTAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGATCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATATATACTTAC-TG-----TAGGAGTTCCTGCACAGCTAGCCG-AGGGGC-----------------TAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGACAATGTAAACATATGAA---CAGTA---ACA
gi|14 : TTTTT-TTTTTTTACA-TTTTAGTTTGTTTTACACAGCCAAGTAATTCCTCA-ACCTGCAATGT-------------------CTTTGCA-TTCCATTATTTACCAATTTCTTTGTACTGCACATGTTGATTCTGTGCTCATTTGCGAATTGTCGGCATGGACATTTC--ATTTT-CCTTGTGTTTC------
gi|15 : tttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaat-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACAAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGATGTTCC--ATTTT-CATTATGTTTC------TCGCT---CT--TAT
gi|2 : GACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTTAATTTGAAGCACTTAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCAG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTATATCCCAATAAAGATAACGTAAACATATGAACAGCAACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTACAAGTTCAGTTAGTTTCACACAACCAAGTACTCCCACA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCACTTTCTTTGTACTATACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGACGTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCCGCGACTT---CAG----GGCTGTATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----GCAG-----TGCGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTAAATTGCATTTGAACCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGCTATCGGCAATTTTTTCTGCGT----GGGTA---ACGAGAGAAT------TATTTATCAACTGTGTTAA--------ATTT------------GTT-------AAGGCG----AC----AACACACCGTATTTATTTT-GAAAATTAGAACAGGTGGGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAA-------------CTTCTCTTGCGTATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATATATT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|3 : AAAATTTCAATTTCAAACACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTACGAGTTCCTGCACAGCTGTCCACAGCGGCCAGTTACAATATcg
gi|3 : aggtaaTGAAACTAGCCCCTGTGCAGCTGTCTCTCCCGATAAAGATAACTTCAACATATGAA---CAGCA---ACATAatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaaTTAT-TTTTTTTACAAGTTCATTTAGTTTCATACAGACAAGTACTCCCTCA-TCCCTTAATGTTTC--AACTGAA---CAACCTTTGCA-TACCACTTATTAGCAATTTCTTTGTACTACAAAAGTTTATCTTGTGCTCATTTG-GAATTGTTGGCATGGAAG-------TTTT-TCTTGGGTTTC------T-------------TCCTG--------------------GAA-----ACTTTCTCCTATGGCAGTAATGTCTATCTTTTTCACATACACTGCACCA---AGCTTTCTTT-T---T----ATTC-----TGGGTTTCtgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaaTTTC--TTTTTATTCTGGGTTTCATTGACTCGCT---TA--TATT----GACTTAGCCAGCCATGGCTGAAAACACACTTTCCCTGA-GGCA-T--TGT-TATCCCTTT---AT-TACT--ACCA---TA--TGCTTT-T-GATAAAAACAT-----TGGATTTCCCCAGATGACGTCACTAGTTCAGAA-------AACT---------CATTTGATTCTTTTCTCTGTATTTTGGGGTTGTCAT---AAGAGCATTATattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagc-TTTCTCTGTATTTTGGGGTTGTCATAAGAGCAT------TATGT-TCA--TGC-------------ATTT------------GTT-------AGGGGGGAAGACGAAAAACATGCTGTATCTATTTT-TAAAATTAGAAGAGGTGCGCACTGGTTGCCAGCATATTGCTCTGCACAATAATGCTGGTAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCCCTTGCATATAATAAAACACGGAGTAAAATAAATGGAGAATATGGACATTTC---A-A-----------------------TTAAA-TTAAAGCACTTTTA---------------------AATGATTTTTGT-TCATTTTCAAGCAC------------TTTCCCACTCACATTAATAATAAGCACTATTTAAGGTGGATTTTAAGAAATAAGCACTTCTCATCTGAGAAGTTGAAAATCAAGCACTTTTCTAATCTCTGCAAACCTTGgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|4 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattctTAACTAGCCG------GGCTGTCTCTCCAAATAAAGATAACTTAAACATATCAA---CAGCA---ACA
gi|4 : a-TTTTTAGAAAAACATCGAAATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagtttatcttgtgctcatttgcgaattgacggcatagacactttcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|4 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntTTAT-TTTTTTTACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGT-------------------CTTTGCA-TCCCATTTTTGACCAGTTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGACGGCATAGACACTTtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagtttatcttgtgctcatttgcgaattgacggcatagacactttcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|4 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaTTTA-TCTTGTG---C------TCATT------------TGCGAATT---GAC----GGC---ATAGACACTTTCTTCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAC----ACAT-----TAGGTTTCCCCAGATGACATCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTTGGG----------------TGTTATTGGCAA-TTTTTCTGCGC----AGGTT---ATGGGAGAAT------TATTTATCAACTGCGTTAA--------GTTTATGCAATTGTTTGTT-------TAGACG----AC----AACACAC-------ATTTT-TAAAATAAGAACAGGTGCACACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGGTTTGCCAAATTGAGCAGTCTCCCTTCTCTTGCATAAAGTAATATAGGGAGTAAAATAAATGGCGAAAATGGACATTTC---ATATTCT------CCATTACTGTTTTTTAAA-TTCAAACTCTTTCAAGCTCTTTTAAAGTACTTTTCGATGATCTTTGT-TCATTTTCAAGCACTTTTC----------CCCACTGACATTAAAAATAAGCACTATTTAAGGAAGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGAGAACCTTGtcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|5 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagTTTTTACAATTTCAGTTAGTTT-ACACAGCCAAATACTCCGTCA-GCCCTAAATGTTTC--A---GAT---TAACCTATGCA-TCCCATTTATTACCAATTTCTTTGTACTAAACAAGTTTATCTTGTGCTCATTTGTGAATTG----CATGGACATTTC--ATTTT-TCTTATGTTTC------TCGCT---CT--TATCGTGCGACTT---CAG----GGCTGAATACATTCTTTCTCTGA-GGCA-T--TGT-TATCTGTTT---AA-T------------TT--TGATT----AAA----ACAT-----TGGGTATCCACAGATGACATCACTAGTTCGGAACACAAGCAGCTGTTA--TTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---AAGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATTAGAGAAT------TATTTATCAATTGCGTTAA--------GTTT------------GTT-------TAGACG----AC----AACACACCATATCTTTTTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACATGGAGTTAAATAAATGGTGAAGATGGACATTTC---ATATAGTATTACACCGTAACTATTTTTTAAA-TTCAAATTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTTAAGCACTTTTCCCACAGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATGAGCACTT-TCATTAGAGAGGTTGAAAATAAAGCACTTTTCAAATCTGTACGAACCTTGca
gi|6 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatactcccactccctgatttcaagaaaaaaatataAA-TTATTAGAAAAACATTAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTACTCAATTGCGAATTGTCGGCATGGACTTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAG-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTTAATTGCATTTGAACCTGTTCTCTGTATTTTGCTGTTGTCAA---ACGGGTGCTATCGGCAA-TTTTTCTGCGC----GATTT---ATGAGAGAAT------TATTTATCAACTGTGTTAA--------ATTT------------GTT-------AAGGCG----AC----AACAAACCTTATCTATTTT-AAAAATTAGAACAGGTACGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAATAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATATATT------CCGTTTCTATTTTTTAAA-TACAAACTCTTTTAAATTC-----AACCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCTCTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCGTTTGAGAGGTTGAAAATCAAGCACTTTTCAAATC--TGCAAACCTTGta
gi|7 : TATATTAACTCACAATACATACTTACATGCATCTTACCAGTCCCTG-A-AACTAC----AGGGGCT
gi|7 : atGTAACTTGC--------AGTTATCTCTCCAAA-AAATAGAACTTAAACATATGAA---CAGCA---Atgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|7 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactaTTTTT-TTTTTTTACAAGTTCAGTTAGTTCCACACAGACAAGTTCTCCCTCA-GCCCTTAATGTTTC--A---ACTTAACGACCTTTGCA-TCCAATTTTTCAGCAATTTCTTCATACTGCACAAGTTTTTCCTGTGCTCTTTTGCG-ATTGTTGACATGGACATTTA--ATTTT-TCTTGCATTTC------TCCCT---CT--TACCCTGTGATTT---CTG----GGCagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|7 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattTTTCTTGTTAT-TCTTG-GTTTCC-----TTGATGGACTGATATCC----ACTTAGCCAGCCACGGCTGCATACACACTTTCAGGGA-GGTA-T--CAT-TTTCCATTC---AC-TTTTG-ATCAAAACG--AG-------GAT----ACAAGTCAATGGGTTTTCCAAGTTGACATCACTAGTTCCGAACACATGCAGCTGTTCAATTTCATTTGATTC---TCTCTATATTAAGGGGTTTTCAT---AGGGCTATTATCAGCAA-CTTTTCTGCGC----AGGTT---ATGGGAGAATTACATGTATTTATCACCTCCGTTAAGTTCATGCATTT------------GTTACGAGAAAAGATG----AA----AACATGCTGCATTTATTTT-TAGAATTAGAAactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|8 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagcTTT-TTTTTTTACA-TTTTAGTTTGTTTTACACAGCCAAGTAATTCCTCA-ACCTGCAATGT-------------------CTTTGCA-TTCCATTATTTACCAATTTCTTTGTACTGCACATGTTGATTCTGTGCTCATTTGCGAATTGTCGGCATGGACATTTC--ATTTT-CCTTGTGTTTC------TCTGT---CT--TATCGTTCGACTT---TAC----GGCCAAATACACACTTTCTCTGA-GGCA-T--TGC-TATCCGTTT---AT-TACT--ACCA------------------------CAC-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAATCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGG----------------TGTTATCGGCAA-ATTTTCTGCGC----GGGTT---ATGGGAGAAT------TATTTATCAACTGCGTTAA--------GTTTATGCAATTTTTTGTT-------TAGACA----AC----AACTAACCGTATCTATTTT-TAAAATTAGAACAGGTGTGCATTGGTTCCCAGCATGCTGCACTGCACAATACTGCTCGGAAACAGATTTGTCAAACTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACAGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATTCT------ATGTTACTGTTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCAATTTTCAATGATTTTTTTATCAATTTTAAGCATTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCAAACCTTG
gi|9 : CTCATGCTCTCAGCGTTTCCAA---GA-----AA---TTCCAATCCCATTTCTTACCAATTTCTTTGTACTACATAAGTTTATCTTGTGCTCATTTGCGAATTGTCAGCATGAACGTTTC--ATTTT-TCTTATGTTTC------TTGCT---AT--TATCGTGCAATTT---CAG----GGCTGAATACACACTTTCTCAGA-GGCA-T--TGT-TATCCGTTT---AT-T------------------TTTTATAAAA----ACAT-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGACCACAAGCAGCTGTTA--TTGTATTTGATTCTGTTCTCTGTATTTTGGGGTTGT--ATTTATGG-TGTTATTGGCAA-TTTTTCTGCGG----GGGTT---ATGGGAGAAT------TA-----------------------------------------GTT-------TAAACG----AC----AACACATCGTATCTATTTT-TAAAATTAGAACAGGTATGCACTGGTTCCAAGCATGCTGCACTGCACAATACTGCTGGGAAACAGACTTGTCAAATTGAGTTGTCTCCCTTCTCTTGCATATAGTAAAATAAGGAGTTAAATAAATGGCGAAGCTGGACATTTCATAATATACT------CCATTATTATTTTTTAAA-TTCAAACTGTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGTACCTTTCAAGCACTTTTCCCACTGACATTAAAAAGAAGCACTATTCAAGGATGTTTTTAAGAAATAATCACTTTTCATTTGAAAt
14 sequences could not be aligned to this reference sequence:
Unaligned ( gi|16 ): AGGCTAGTGTCGATATATATTTCATATCTATATCCCTATATATAGTATAATAAAGACTCTTATTCTATATATAGGGATATAGCTATAAAATGCATGTTTATTGACACTAGCTTCTGTG
Unaligned ( gi|17 ): ACAGCGGCTTGTCACAATATATGTTCTATATTCTATATATAGTATAATCAAGTTTTTATTATCCTAAATATAGGGATATAGAATATATATTGTCACTATCCCCTGTG
Unaligned ( gi|18 ): ATAGGGGCTAGTGACAATGCATATTCTATATCCCCAGTATATACGAGTATAATATTATATTATACATAGGGATGTAGACTATATATTGCCACTAGCCCCTGT
Unaligned ( gi|19 ): ATAGGGACGAGTGACAATATATCTTTATATCCCTATATATAGTATAATAAAGACTTTATATAGGGATATATAAAAATATGTATTGTTAAACCCCTGTG
Unaligned ( gi|20 ): CACAGGTTCCAGTCACAATATATATTCTATATCCCTGTACATGGTATAATCTTTATAAGGATATAGCATATATAATTTGTCACTAACCCCTGT
Unaligned ( gi|21 ): ATATATATTCTAAATTCCTATATATAGTATTATAAAGACTATTAAACTATATATAGGGATATAGAATATATCTTTTGTAACTAACCCTG
Unaligned ( gi|22 ): CAAGGGCTGGTAACAATATATATTCTATATTCCTATATATAGTATACATAGGGATATAAAATATATATTGGCACTAGCCCCTGT
Unaligned ( gi|23 ): AGTGGCAAGTGTCAATATACATTTTATATCCCTATACTTTATATAAAAATATAAAATGTGTATTGACACTTGCCCCTG
Unaligned ( gi|24 ): ATAAAATGTAATAATTTGTTCAAAAGAACAGCTTAGACAAGTACATATCAATTTTACCATGCATATCT
Unaligned ( gi|25 ): TAAAGACTCTTATTATATTATATACTGGCATAATAATATACATGTATATAGTCACTAGCCCCT
Unaligned ( gi|26 ): TACAATATATAATTATTCTATATCCCTATATATATTATACTAAAGACAAAGGTA
Unaligned ( gi|27 ): CCGCGGCTAATGGCAGTATATATTTCATATTTCTATATAAAGTATAATAAAGAC
Unaligned ( gi|28 ): CAACATCAAAAGGGCTAGTGTCAATATATAGTTTATATCTATATCCCTATACTA
Unaligned ( gi|29 ): CACAGGGGCTAGTGTCCATATACACTTTATATCCCTATTTATAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 33333333333 111111 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 444444444444444444444444444444444444444444444 1111111111111 111111 1111111111 11111111111111111111111 111111 11111111 111111 11111111 444444444444 11111111 111111111 11111
lowQualScore : 88888888888 5 0 0 5 7 3 1 0 1 6 222222 1 777 777 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 8 555555555555555555555555555555555555555555555 5 33 3 4 8888888888888 1 3 1 0 44 3 111111 7777777 3 0 6666666666 1 4 4 55 4 777 4 3 99 77777777777777777777777 111111 4 1 22222222 3 4 9999 777 222222 1 66666666 555555555555 55555555 9999 9999 4 0 1 777 555555555 4 11111 4 0 2
lowQualScore : ........... . . . . . . . . . . ...... . ... ... .......................................................................................................... . ............................................. . .. . . ............. . . . . .. . ...... ....... . . .......... . . . .. . ... . . .. ....................... ...... . . ........ . . .... ... ...... . ........ ............ ........ .... .... . . . ... ......... . ..... . . .
lowQualScore : 00000000000 7 1 7 7 1 3 0 6 0 7 888888 1 888 888 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 000000000000000000000000000000000000000000000 0 00 6 4 2222222222222 4 6 0 5 66 1 999999 2222222 6 5 5555555555 0 0 0 55 0 000 0 4 55 77777777777777777777777 000000 6 1 00000000 9 4 4444 888 888888 8 11111111 666666666666 44444444 4444 4444 4 2 1 888 000000000 4 11111 4 1 7
consensus : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTC--ATTTT-TCTTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACACTTTCTCCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------ATTT------------GTTN-------AGGCG----AC----AACACACCGTATCTATTTT-TAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATACT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
Reference ( family-6046 ) : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTC--ATTTT-TCTTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACACTTTCTCCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------ATTT------------GTTN-------AGGCG----AC----AACACACCGTATCTATTTT-TAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATACT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|1 : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAG-----------GTCAAAATTTCAATTTCAAGCACTTTAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCAG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTATATCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAACCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCACTTTCTTTGTACTACACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGACGTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCTGCGAATT---CAG----GGCTGTATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----GCAA-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTAAATTGCATTTGAACCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGCTATCAGCAA-TTTTTCTGCGT----GGATA---ACGAGAGAATTA------TTTATCAACTGTGTTAA--------ATTT------------GTTA-------AGGCG----AC----AACACACCGTATCTATTTT-AAAAATTAGAACAGGTAGGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCGTATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATATATT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|10 : CAGGGTTCATACAGATTAGGACCTATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGACATACATACTTAC-TGTATCTTAGGAGTTCCTGCACAACTATCCG-AGGGGC-----------------TAGTTACA-ATATTGTGTAACTTGCCC------AGCTGTCTCTCCCAATAAAGACAACGTAAACATATGAA---CAGCA---ACATA
gi|10 : -TTATTAGAAAAACATCAAAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttattagaaaaacatcaaaatt
gi|11 : cagggttcatacagattaggacctataaaattcaagcacttttcaagcacttttcaaggtcaaaatttcaatttcaagcactaaaatagatgaactcgacatacatacttactgtatcttaggagttcctgcacaactatccgaggggctagttacaatattgtgtaacttgcccagctgtctctcccaataaagacaacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGAATAGATATATATACATTGCAACTATCTC------AGCTGTCTCTCCCAATAAAGATAACTTAAACATATGAA---CAGCA---ACATA
gi|11 : taaagtctttattatactatataaagggataaaCAATTC---ATAT--T------CTGTTACTTTTTTTTAAAATTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTTGTTCATTTTT-AAGCACTTTTTA-ACTGATATTACAAATGAGCACTATTCAAGGACATTTTTAAGAAATAAGCACTTCTCATTTGAAAGGTTGAAAATCAAGCTCTagaccataataaatcaattcatattctgttacttttttttaaaattcaaactcttttaaattcaagcacttttcaatgatttttgttcatttttgttcatttttaagcactttttaactgatattacaaatgagcactattcaaggacatttttaagaaataagcacttctcatttgaaaggttgaaaatcaagctct
gi|12 : taaagtctttattatactatataaagggataaagaatagatatatatacattgcaactatctcagctgtctctcccaataaagataacttaaacatatgaacagcaacataagaccataataaatCAGGGTTCATACAGATAAGGACTGATAAAATTCAAGCACTTTTCAAGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCATTAAAATAGATGAACTCGCCAAACATACTTAC-TGTACCTTAGGAGTTCCTGCGCAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTATTCCAATAAAGACAATGTAAACATATGAA---CAGCA---ACAT
gi|13 : CAGGGTTCATACATGTAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGATCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATATATACTTAC-TG-----TAGGAGTTCCTGCACAGCTAGCCG-AGGGGC-----------------TAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGACAATGTAAACATATGAA---CAGTA---ACA
gi|14 : TTTTT-TTTTTTTACA-TTTTAGTTTGTTTTACACAGCCAAGTAATTCCTCA-ACCTGCAATGT-------------------CTTTGCA-TTCCATTATTTACCAATTTCTTTGTACTGCACATGTTGATTCTGTGCTCATTTGCGAATTGTCGGCATGGACATTTC--ATTTT-CCTTGTGTTTC------
gi|15 : tttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaat-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACAAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGATGTTCC--ATTTT-CATTATGTTTC------TCGCT---CT--TAT
gi|2 : GACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTTAATTTGAAGCACTTAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCAG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTATATCCCAATAAAGATAACGTAAACATATGAACAGCAACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTACAAGTTCAGTTAGTTTCACACAACCAAGTACTCCCACA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCACTTTCTTTGTACTATACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGACGTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCCGCGACTT---CAG----GGCTGTATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----GCAG-----TGCGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTAAATTGCATTTGAACCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGCTATCGGCAATTTTTTCTGCGT----GGGTA---ACGAGAGAATTA------TTTATCAACTGTGTTAA--------ATTT------------GTTA-------AGGCG----AC----AACACACCGTATTTATTTT-GAAAATTAGAACAGGTGGGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAA-------------CTTCTCTTGCGTATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATATATT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|3 : AAAATTTCAATTTCAAACACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTACGAGTTCCTGCACAGCTGTCCACAGCGGCCAGTTACAATATcg
gi|3 : aggtaaTGAAACTAGCCCCTGTGCAGCTGTCTCTCCCGATAAAGATAACTTCAACATATGAA---CAGCA---ACATAatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaaTTAT-TTTTTTTACAAGTTCATTTAGTTTCATACAGACAAGTACTCCCTCA-TCCCTTAATGTTTC--AACTGAA---CAACCTTTGCA-TACCACTTATTAGCAATTTCTTTGTACTACAAAAGTTTATCTTGTGCTCATTTG-GAATTGTTGGCATGGAAG-------TTTT-TCTTGGGTTTC------T-------------TCCTG--------------------GAA-----ACTTTCTCCTATGGCAGTAATGTCTATCTTTTTCACATACACTGCACCA---AGCTTTCTTT-T---T----ATTC-----TGGGTTTCtgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaaTTTC--TTTTTATTCTGGGTTTCATTGACTCGCT---TA--TATT----GACTTAGCCAGCCATGGCTGAAAACACACTTTCCCTGA-GGCA-T--TGT-TATCCCTTT---AT-TACT--ACCA---TA--TGCTTT-T-GATAAAAACAT-----TGGATTTCCCCAGATGACGTCACTAGTTCAGAA-------AACT---------CATTTGATTCTTTTCTCTGTATTTTGGGGTTGTCAT---AAGAGCATTATattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagc-TTTCTCTGTATTTTGGGGTTGTCATAAGAGCATTA------TGT-TCA--TGC-------------ATTT------------GTTA-------GGGGGGAAGACGAAAAACATGCTGTATCTATTTT-TAAAATTAGAAGAGGTGCGCACTGGTTGCCAGCATATTGCTCTGCACAATAATGCTGGTAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCCCTTGCATATAATAAAACACGGAGTAAAATAAATGGAGAATATGGACATTTC---A-A-----------------------TTAAA-TTAAAGCACTTTTA---------------------AATGATTTTTGT-TCATTTTCAAGCAC------------TTTCCCACTCACATTAATAATAAGCACTATTTAAGGTGGATTTTAAGAAATAAGCACTTCTCATCTGAGAAGTTGAAAATCAAGCACTTTTCTAATCTCTGCAAACCTTGgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|4 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattctTAACTAGCCG------GGCTGTCTCTCCAAATAAAGATAACTTAAACATATCAA---CAGCA---ACA
gi|4 : a-TTTTTAGAAAAACATCGAAATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagtttatcttgtgctcatttgcgaattgacggcatagacactttcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|4 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntTTAT-TTTTTTTACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGT-------------------CTTTGCA-TCCCATTTTTGACCAGTTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGACGGCATAGACACTTtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagtttatcttgtgctcatttgcgaattgacggcatagacactttcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|4 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaTTTA-TCTTGTG---C------TCATT------------TGCGAATT---GAC----GGC---ATAGACACTTTCTTCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAC----ACAT-----TAGGTTTCCCCAGATGACATCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTTGGG----------------TGTTATTGGCAA-TTTTTCTGCGC----AGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------GTTTATGCAATTGTTTGTTT-------AGACG----AC----AACACAC-------ATTTT-TAAAATAAGAACAGGTGCACACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGGTTTGCCAAATTGAGCAGTCTCCCTTCTCTTGCATAAAGTAATATAGGGAGTAAAATAAATGGCGAAAATGGACATTTC---ATATTCT------CCATTACTGTTTTTTAAA-TTCAAACTCTTTCAAGCTCTTTTAAAGTACTTTTCGATGATCTTTGT-TCATTTTCAAGCACTTTTC----------CCCACTGACATTAAAAATAAGCACTATTTAAGGAAGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGAGAACCTTGtcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|5 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagTTTTTACAATTTCAGTTAGTTT-ACACAGCCAAATACTCCGTCA-GCCCTAAATGTTTC--A---GAT---TAACCTATGCA-TCCCATTTATTACCAATTTCTTTGTACTAAACAAGTTTATCTTGTGCTCATTTGTGAATTG----CATGGACATTTC--ATTTT-TCTTATGTTTC------TCGCT---CT--TATCGTGCGACTT---CAG----GGCTGAATACATTCTTTCTCTGA-GGCA-T--TGT-TATCTGTTT---AA-T------------TT--TGATT----AAA----ACAT-----TGGGTATCCACAGATGACATCACTAGTTCGGAACACAAGCAGCTGTTA--TTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---AAGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATTAGAGAATTA------TTTATCAATTGCGTTAA--------GTTT------------GTTT-------AGACG----AC----AACACACCATATCTTTTTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACATGGAGTTAAATAAATGGTGAAGATGGACATTTC---ATATAGTATTACACCGTAACTATTTTTTAAA-TTCAAATTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTTAAGCACTTTTCCCACAGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATGAGCACTT-TCATTAGAGAGGTTGAAAATAAAGCACTTTTCAAATCTGTACGAACCTTGca
gi|6 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatactcccactccctgatttcaagaaaaaaatataAA-TTATTAGAAAAACATTAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTACTCAATTGCGAATTGTCGGCATGGACTTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAG-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTTAATTGCATTTGAACCTGTTCTCTGTATTTTGCTGTTGTCAA---ACGGGTGCTATCGGCAA-TTTTTCTGCGC----GATTT---ATGAGAGAATTA------TTTATCAACTGTGTTAA--------ATTT------------GTTA-------AGGCG----AC----AACAAACCTTATCTATTTT-AAAAATTAGAACAGGTACGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAATAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATATATT------CCGTTTCTATTTTTTAAA-TACAAACTCTTTTAAATTC-----AACCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCTCTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCGTTTGAGAGGTTGAAAATCAAGCACTTTTCAAATC--TGCAAACCTTGta
gi|7 : TATATTAACTCACAATACATACTTACATGCATCTTACCAGTCCCTG-A-AACTAC----AGGGGCT
gi|7 : atGTAACTTGC--------AGTTATCTCTCCAAA-AAATAGAACTTAAACATATGAA---CAGCA---Atgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|7 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactaTTTTT-TTTTTTTACAAGTTCAGTTAGTTCCACACAGACAAGTTCTCCCTCA-GCCCTTAATGTTTC--A---ACTTAACGACCTTTGCA-TCCAATTTTTCAGCAATTTCTTCATACTGCACAAGTTTTTCCTGTGCTCTTTTGCG-ATTGTTGACATGGACATTTA--ATTTT-TCTTGCATTTC------TCCCT---CT--TACCCTGTGATTT---CTG----GGCagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|7 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattTTTCTTGTTAT-TCTTG-GTTTCC-----TTGATGGACTGATATCC----ACTTAGCCAGCCACGGCTGCATACACACTTTCAGGGA-GGTA-T--CAT-TTTCCATTC---AC-TTTTG-ATCAAAACG--AG-------GAT----ACAAGTCAATGGGTTTTCCAAGTTGACATCACTAGTTCCGAACACATGCAGCTGTTCAATTTCATTTGATTCT---CTCTATATTAAGGGGTTTTCAT---AGGGCTATTATCAGCAA-CTTTTCTGCGC----AGGTT---ATGGGAGAATTACATGTATTTATCACCTCCGTTAAGTTCATGCATTT------------GTTACGAGAAAAGATG----AA----AACATGCTGCATTTATTTT-TAGAATTAGAAactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|8 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagcTTT-TTTTTTTACA-TTTTAGTTTGTTTTACACAGCCAAGTAATTCCTCA-ACCTGCAATGT-------------------CTTTGCA-TTCCATTATTTACCAATTTCTTTGTACTGCACATGTTGATTCTGTGCTCATTTGCGAATTGTCGGCATGGACATTTC--ATTTT-CCTTGTGTTTC------TCTGT---CT--TATCGTTCGACTT---TAC----GGCCAAATACACACTTTCTCTGA-GGCA-T--TGC-TATCCGTTT---AT-TACT--ACCA------------------------CAC-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAATCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGG----------------TGTTATCGGCAA-ATTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------GTTTATGCAATTTTTTGTTT-------AGACA----AC----AACTAACCGTATCTATTTT-TAAAATTAGAACAGGTGTGCATTGGTTCCCAGCATGCTGCACTGCACAATACTGCTCGGAAACAGATTTGTCAAACTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACAGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATTCT------ATGTTACTGTTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCAATTTTCAATGATTTTTTTATCAATTTTAAGCATTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCAAACCTTG
gi|9 : CTCATGCTCTCAGCGTTTCCAA---GA-----AA---TTCCAATCCCATTTCTTACCAATTTCTTTGTACTACATAAGTTTATCTTGTGCTCATTTGCGAATTGTCAGCATGAACGTTTC--ATTTT-TCTTATGTTTC------TTGCT---AT--TATCGTGCAATTT---CAG----GGCTGAATACACACTTTCTCAGA-GGCA-T--TGT-TATCCGTTT---AT-T------------------TTTTATAAAA----ACAT-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGACCACAAGCAGCTGTTA--TTGTATTTGATTCTGTTCTCTGTATTTTGGGGTTGT--ATTTATGG-TGTTATTGGCAA-TTTTTCTGCGG----GGGTT---ATGGGAGAATTA-----------------------------------------------GTTT-------AAACG----AC----AACACATCGTATCTATTTT-TAAAATTAGAACAGGTATGCACTGGTTCCAAGCATGCTGCACTGCACAATACTGCTGGGAAACAGACTTGTCAAATTGAGTTGTCTCCCTTCTCTTGCATATAGTAAAATAAGGAGTTAAATAAATGGCGAAGCTGGACATTTCATAATATACT------CCATTATTATTTTTTAAA-TTCAAACTGTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGTACCTTTCAAGCACTTTTCCCACTGACATTAAAAAGAAGCACTATTCAAGGATGTTTTTAAGAAATAATCACTTTTCATTTGAAAt
14 sequences could not be aligned to this reference sequence:
Unaligned ( gi|16 ): AGGCTAGTGTCGATATATATTTCATATCTATATCCCTATATATAGTATAATAAAGACTCTTATTCTATATATAGGGATATAGCTATAAAATGCATGTTTATTGACACTAGCTTCTGTG
Unaligned ( gi|17 ): ACAGCGGCTTGTCACAATATATGTTCTATATTCTATATATAGTATAATCAAGTTTTTATTATCCTAAATATAGGGATATAGAATATATATTGTCACTATCCCCTGTG
Unaligned ( gi|18 ): ATAGGGGCTAGTGACAATGCATATTCTATATCCCCAGTATATACGAGTATAATATTATATTATACATAGGGATGTAGACTATATATTGCCACTAGCCCCTGT
Unaligned ( gi|19 ): ATAGGGACGAGTGACAATATATCTTTATATCCCTATATATAGTATAATAAAGACTTTATATAGGGATATATAAAAATATGTATTGTTAAACCCCTGTG
Unaligned ( gi|20 ): CACAGGTTCCAGTCACAATATATATTCTATATCCCTGTACATGGTATAATCTTTATAAGGATATAGCATATATAATTTGTCACTAACCCCTGT
Unaligned ( gi|21 ): ATATATATTCTAAATTCCTATATATAGTATTATAAAGACTATTAAACTATATATAGGGATATAGAATATATCTTTTGTAACTAACCCTG
Unaligned ( gi|22 ): CAAGGGCTGGTAACAATATATATTCTATATTCCTATATATAGTATACATAGGGATATAAAATATATATTGGCACTAGCCCCTGT
Unaligned ( gi|23 ): AGTGGCAAGTGTCAATATACATTTTATATCCCTATACTTTATATAAAAATATAAAATGTGTATTGACACTTGCCCCTG
Unaligned ( gi|24 ): ATAAAATGTAATAATTTGTTCAAAAGAACAGCTTAGACAAGTACATATCAATTTTACCATGCATATCT
Unaligned ( gi|25 ): TAAAGACTCTTATTATATTATATACTGGCATAATAATATACATGTATATAGTCACTAGCCCCT
Unaligned ( gi|26 ): TACAATATATAATTATTCTATATCCCTATATATATTATACTAAAGACAAAGGTA
Unaligned ( gi|27 ): CCGCGGCTAATGGCAGTATATATTTCATATTTCTATATAAAGTATAATAAAGAC
Unaligned ( gi|28 ): CAACATCAAAAGGGCTAGTGTCAATATATAGTTTATATCTATATCCCTATACTA
Unaligned ( gi|29 ): CACAGGGGCTAGTGTCCATATACACTTTATATCCCTATTTATAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 33333333333 111111 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 444444444444444444444444444444444444444444444 1111111111111 111111 1111111111 11111111111111111111111 111111 11111111 111111 11111111 444444444444 11111111 111111111 11111
lowQualScore : 88888888888 5 0 0 5 7 3 1 0 1 6 222222 1 777 777 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 8 555555555555555555555555555555555555555555555 5 33 3 4 8888888888888 1 3 1 0 44 3 111111 7777777 3 0 6666666666 1 4 4 55 4 777 4 3 99 77777777777777777777777 111111 4 1 22222222 3 4 9999 777 222222 1 66666666 555555555555 55555555 9999 9999 4 0 1 777 555555555 4 11111 4 0 2
lowQualScore : ........... . . . . . . . . . . ...... . ... ... .......................................................................................................... . ............................................. . .. . . ............. . . . . .. . ...... ....... . . .......... . . . .. . ... . . .. ....................... ...... . . ........ . . .... ... ...... . ........ ............ ........ .... .... . . . ... ......... . ..... . . .
lowQualScore : 00000000000 7 1 7 7 1 3 0 6 0 7 888888 1 888 888 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 000000000000000000000000000000000000000000000 0 00 6 4 2222222222222 4 6 0 5 66 1 999999 2222222 6 5 5555555555 0 0 0 55 0 000 0 4 55 77777777777777777777777 000000 6 1 00000000 9 4 4444 888 888888 8 11111111 666666666666 44444444 4444 4444 4 2 1 888 000000000 4 11111 4 1 7
consensus : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTC--ATTTT-TCTTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACACTTTCTCCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------ATTT------------GTTN-------AGGCG----AC----AACACACCGTATCTATTTT-TAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATACT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
Reference ( family-6046 ) : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTC--ATTTT-TCTTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACACTTTCTCCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------ATTT------------GTTN-------AGGCG----AC----AACACACCGTATCTATTTT-TAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATACT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|1 : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAG-----------GTCAAAATTTCAATTTCAAGCACTTTAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCAG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTATATCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAACCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCACTTTCTTTGTACTACACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGACGTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCTGCGAATT---CAG----GGCTGTATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----GCAA-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTAAATTGCATTTGAACCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGCTATCAGCAA-TTTTTCTGCGT----GGATA---ACGAGAGAATTA------TTTATCAACTGTGTTAA--------ATTT------------GTTA-------AGGCG----AC----AACACACCGTATCTATTTT-AAAAATTAGAACAGGTAGGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCGTATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATATATT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|10 : CAGGGTTCATACAGATTAGGACCTATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGACATACATACTTAC-TGTATCTTAGGAGTTCCTGCACAACTATCCG-AGGGGC-----------------TAGTTACA-ATATTGTGTAACTTGCCC------AGCTGTCTCTCCCAATAAAGACAACGTAAACATATGAA---CAGCA---ACATA
gi|10 : -TTATTAGAAAAACATCAAAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttattagaaaaacatcaaaatt
gi|11 : cagggttcatacagattaggacctataaaattcaagcacttttcaagcacttttcaaggtcaaaatttcaatttcaagcactaaaatagatgaactcgacatacatacttactgtatcttaggagttcctgcacaactatccgaggggctagttacaatattgtgtaacttgcccagctgtctctcccaataaagacaacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGAATAGATATATATACATTGCAACTATCTC------AGCTGTCTCTCCCAATAAAGATAACTTAAACATATGAA---CAGCA---ACATA
gi|11 : taaagtctttattatactatataaagggataaaCAATTC---ATAT--T------CTGTTACTTTTTTTTAAAATTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTTGTTCATTTTT-AAGCACTTTTTA-ACTGATATTACAAATGAGCACTATTCAAGGACATTTTTAAGAAATAAGCACTTCTCATTTGAAAGGTTGAAAATCAAGCTCTagaccataataaatcaattcatattctgttacttttttttaaaattcaaactcttttaaattcaagcacttttcaatgatttttgttcatttttgttcatttttaagcactttttaactgatattacaaatgagcactattcaaggacatttttaagaaataagcacttctcatttgaaaggttgaaaatcaagctct
gi|12 : taaagtctttattatactatataaagggataaagaatagatatatatacattgcaactatctcagctgtctctcccaataaagataacttaaacatatgaacagcaacataagaccataataaatCAGGGTTCATACAGATAAGGACTGATAAAATTCAAGCACTTTTCAAGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCATTAAAATAGATGAACTCGCCAAACATACTTAC-TGTACCTTAGGAGTTCCTGCGCAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTATTCCAATAAAGACAATGTAAACATATGAA---CAGCA---ACAT
gi|13 : CAGGGTTCATACATGTAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGATCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATATATACTTAC-TG-----TAGGAGTTCCTGCACAGCTAGCCG-AGGGGC-----------------TAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGACAATGTAAACATATGAA---CAGTA---ACA
gi|14 : TTTTT-TTTTTTTACA-TTTTAGTTTGTTTTACACAGCCAAGTAATTCCTCA-ACCTGCAATGT-------------------CTTTGCA-TTCCATTATTTACCAATTTCTTTGTACTGCACATGTTGATTCTGTGCTCATTTGCGAATTGTCGGCATGGACATTTC--ATTTT-CCTTGTGTTTC------
gi|15 : tttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaat-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACAAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGATGTTCC--ATTTT-CATTATGTTTC------TCGCT---CT--TAT
gi|2 : GACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTTAATTTGAAGCACTTAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCAG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTATATCCCAATAAAGATAACGTAAACATATGAACAGCAACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTACAAGTTCAGTTAGTTTCACACAACCAAGTACTCCCACA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCACTTTCTTTGTACTATACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGACGTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCCGCGACTT---CAG----GGCTGTATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----GCAG-----TGCGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTAAATTGCATTTGAACCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGCTATCGGCAATTTTTTCTGCGT----GGGTA---ACGAGAGAATTA------TTTATCAACTGTGTTAA--------ATTT------------GTTA-------AGGCG----AC----AACACACCGTATTTATTTT-GAAAATTAGAACAGGTGGGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAA-------------CTTCTCTTGCGTATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATATATT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|3 : AAAATTTCAATTTCAAACACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTACGAGTTCCTGCACAGCTGTCCACAGCGGCCAGTTACAATATcg
gi|3 : aggtaaTGAAACTAGCCCCTGTGCAGCTGTCTCTCCCGATAAAGATAACTTCAACATATGAA---CAGCA---ACATAatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaaTTAT-TTTTTTTACAAGTTCATTTAGTTTCATACAGACAAGTACTCCCTCA-TCCCTTAATGTTTC--AACTGAA---CAACCTTTGCA-TACCACTTATTAGCAATTTCTTTGTACTACAAAAGTTTATCTTGTGCTCATTTG-GAATTGTTGGCATGGAAG-------TTTT-TCTTGGGTTTC------T-------------TCCTG--------------------GAA-----ACTTTCTCCTATGGCAGTAATGTCTATCTTTTTCACATACACTGCACCA---AGCTTTCTTT-T---T----ATTC-----TGGGTTTCtgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaaTTTC--TTTTTATTCTGGGTTTCATTGACTCGCT---TA--TATT----GACTTAGCCAGCCATGGCTGAAAACACACTTTCCCTGA-GGCA-T--TGT-TATCCCTTT---AT-TACT--ACCA---TA--TGCTTT-T-GATAAAAACAT-----TGGATTTCCCCAGATGACGTCACTAGTTCAGAA-------AACT---------CATTTGATTCTTTTCTCTGTATTTTGGGGTTGTCAT---AAGAGCATTATattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagc-TTTCTCTGTATTTTGGGGTTGTCATAAGAGCATTA------TGT-TCA--TGC-------------ATTT------------GTTA-------GGGGGGAAGACGAAAAACATGCTGTATCTATTTT-TAAAATTAGAAGAGGTGCGCACTGGTTGCCAGCATATTGCTCTGCACAATAATGCTGGTAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCCCTTGCATATAATAAAACACGGAGTAAAATAAATGGAGAATATGGACATTTC---A-A-----------------------TTAAA-TTAAAGCACTTTTA---------------------AATGATTTTTGT-TCATTTTCAAGCAC------------TTTCCCACTCACATTAATAATAAGCACTATTTAAGGTGGATTTTAAGAAATAAGCACTTCTCATCTGAGAAGTTGAAAATCAAGCACTTTTCTAATCTCTGCAAACCTTGgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|4 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattctTAACTAGCCG------GGCTGTCTCTCCAAATAAAGATAACTTAAACATATCAA---CAGCA---ACA
gi|4 : a-TTTTTAGAAAAACATCGAAATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagtttatcttgtgctcatttgcgaattgacggcatagacactttcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|4 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntTTAT-TTTTTTTACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGT-------------------CTTTGCA-TCCCATTTTTGACCAGTTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGACGGCATAGACACTTtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagtttatcttgtgctcatttgcgaattgacggcatagacactttcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|4 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaTTTA-TCTTGTG---C------TCATT------------TGCGAATT---GAC----GGC---ATAGACACTTTCTTCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAC----ACAT-----TAGGTTTCCCCAGATGACATCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTTGGG----------------TGTTATTGGCAA-TTTTTCTGCGC----AGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------GTTTATGCAATTGTTTGTTT-------AGACG----AC----AACACAC-------ATTTT-TAAAATAAGAACAGGTGCACACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGGTTTGCCAAATTGAGCAGTCTCCCTTCTCTTGCATAAAGTAATATAGGGAGTAAAATAAATGGCGAAAATGGACATTTC---ATATTCT------CCATTACTGTTTTTTAAA-TTCAAACTCTTTCAAGCTCTTTTAAAGTACTTTTCGATGATCTTTGT-TCATTTTCAAGCACTTTTC----------CCCACTGACATTAAAAATAAGCACTATTTAAGGAAGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGAGAACCTTGtcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|5 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagTTTTTACAATTTCAGTTAGTTT-ACACAGCCAAATACTCCGTCA-GCCCTAAATGTTTC--A---GAT---TAACCTATGCA-TCCCATTTATTACCAATTTCTTTGTACTAAACAAGTTTATCTTGTGCTCATTTGTGAATTG----CATGGACATTTC--ATTTT-TCTTATGTTTC------TCGCT---CT--TATCGTGCGACTT---CAG----GGCTGAATACATTCTTTCTCTGA-GGCA-T--TGT-TATCTGTTT---AA-T------------TT--TGATT----AAA----ACAT-----TGGGTATCCACAGATGACATCACTAGTTCGGAACACAAGCAGCTGTTA--TTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---AAGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATTAGAGAATTA------TTTATCAATTGCGTTAA--------GTTT------------GTTT-------AGACG----AC----AACACACCATATCTTTTTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACATGGAGTTAAATAAATGGTGAAGATGGACATTTC---ATATAGTATTACACCGTAACTATTTTTTAAA-TTCAAATTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTTAAGCACTTTTCCCACAGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATGAGCACTT-TCATTAGAGAGGTTGAAAATAAAGCACTTTTCAAATCTGTACGAACCTTGca
gi|6 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatactcccactccctgatttcaagaaaaaaatataAA-TTATTAGAAAAACATTAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTACTCAATTGCGAATTGTCGGCATGGACTTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAG-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTTAATTGCATTTGAACCTGTTCTCTGTATTTTGCTGTTGTCAA---ACGGGTGCTATCGGCAA-TTTTTCTGCGC----GATTT---ATGAGAGAATTA------TTTATCAACTGTGTTAA--------ATTT------------GTTA-------AGGCG----AC----AACAAACCTTATCTATTTT-AAAAATTAGAACAGGTACGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAATAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATATATT------CCGTTTCTATTTTTTAAA-TACAAACTCTTTTAAATTC-----AACCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCTCTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCGTTTGAGAGGTTGAAAATCAAGCACTTTTCAAATC--TGCAAACCTTGta
gi|7 : TATATTAACTCACAATACATACTTACATGCATCTTACCAGTCCCTG-A-AACTAC----AGGGGCT
gi|7 : atGTAACTTGC--------AGTTATCTCTCCAAA-AAATAGAACTTAAACATATGAA---CAGCA---Atgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|7 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactaTTTTT-TTTTTTTACAAGTTCAGTTAGTTCCACACAGACAAGTTCTCCCTCA-GCCCTTAATGTTTC--A---ACTTAACGACCTTTGCA-TCCAATTTTTCAGCAATTTCTTCATACTGCACAAGTTTTTCCTGTGCTCTTTTGCG-ATTGTTGACATGGACATTTA--ATTTT-TCTTGCATTTC------TCCCT---CT--TACCCTGTGATTT---CTG----GGCagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|7 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattTTTCTTGTTAT-TCTTG-GTTTCC-----TTGATGGACTGATATCC----ACTTAGCCAGCCACGGCTGCATACACACTTTCAGGGA-GGTA-T--CAT-TTTCCATTC---AC-TTTTG-ATCAAAACG--AG-------GAT----ACAAGTCAATGGGTTTTCCAAGTTGACATCACTAGTTCCGAACACATGCAGCTGTTCAATTTCATTTGATTCT---CTCTATATTAAGGGGTTTTCAT---AGGGCTATTATCAGCAA-CTTTTCTGCGC----AGGTT---ATGGGAGAATTACATGTATTTATCACCTCCGTTAAGTTCATGCATTT------------GTTACGAGAAAAGATG----AA----AACATGCTGCATTTATTTT-TAGAATTAGAAactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|8 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagcTTT-TTTTTTTACA-TTTTAGTTTGTTTTACACAGCCAAGTAATTCCTCA-ACCTGCAATGT-------------------CTTTGCA-TTCCATTATTTACCAATTTCTTTGTACTGCACATGTTGATTCTGTGCTCATTTGCGAATTGTCGGCATGGACATTTC--ATTTT-CCTTGTGTTTC------TCTGT---CT--TATCGTTCGACTT---TAC----GGCCAAATACACACTTTCTCTGA-GGCA-T--TGC-TATCCGTTT---AT-TACT--ACCA------------------------CAC-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAATCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGG----------------TGTTATCGGCAA-ATTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------GTTTATGCAATTTTTTGTTT-------AGACA----AC----AACTAACCGTATCTATTTT-TAAAATTAGAACAGGTGTGCATTGGTTCCCAGCATGCTGCACTGCACAATACTGCTCGGAAACAGATTTGTCAAACTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACAGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATTCT------ATGTTACTGTTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCAATTTTCAATGATTTTTTTATCAATTTTAAGCATTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCAAACCTTG
gi|9 : CTCATGCTCTCAGCGTTTCCAA---GA-----AA---TTCCAATCCCATTTCTTACCAATTTCTTTGTACTACATAAGTTTATCTTGTGCTCATTTGCGAATTGTCAGCATGAACGTTTC--ATTTT-TCTTATGTTTC------TTGCT---AT--TATCGTGCAATTT---CAG----GGCTGAATACACACTTTCTCAGA-GGCA-T--TGT-TATCCGTTT---AT-T------------------TTTTATAAAA----ACAT-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGACCACAAGCAGCTGTTA--TTGTATTTGATTCTGTTCTCTGTATTTTGGGGTTGT--ATTTATGG-TGTTATTGGCAA-TTTTTCTGCGG----GGGTT---ATGGGAGAATTA-----------------------------------------------GTTT-------AAACG----AC----AACACATCGTATCTATTTT-TAAAATTAGAACAGGTATGCACTGGTTCCAAGCATGCTGCACTGCACAATACTGCTGGGAAACAGACTTGTCAAATTGAGTTGTCTCCCTTCTCTTGCATATAGTAAAATAAGGAGTTAAATAAATGGCGAAGCTGGACATTTCATAATATACT------CCATTATTATTTTTTAAA-TTCAAACTGTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGTACCTTTCAAGCACTTTTCCCACTGACATTAAAAAGAAGCACTATTCAAGGATGTTTTTAAGAAATAATCACTTTTCATTTGAAAt
blockSeqs : AGCACTTTTCA A C T A G A T CTGTGC G CAG TAN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN . NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN N AG T T AACTGAAC C A A TT A ATTGAC GGACTGA C AGCCAGCCAT T T G AA C CAC A A GC TATGCTTTTGATAAAA AGTCAA A G ATTTAT G T TTTG GTC CATGTA A GTTCATGC ATGCAATTGTTT ACGAGAAA GAAG GAAA T T ATA AGTATTACA A TTTTA A C
blockSeqs : . . . T A G G . . T . . . NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN . AG . T AACTTAAC C . G . . C CT C AGCCAGCCAC A . . . . . . A G TGTGCTTTTGGAT G A G CAAAC G . . . . A . ATGCAATTTTTT A . . . A . ATT . . . T
blockSeqs : . . . C T A G . . G . . . . AC . T AGATC C . G . . . CT G CAG A . . . . . . A . TGTGCTTTTGGAC C A G CATAA G . . . . A . . A . . . C . TCT . . . C
blockSeqs : . . . T . . . . . G . . . . AT . T AGATC C . T . . . TA C GAC A . . . . . . A . TGTGCTTTTGGAT T A G CAAAA G . . . . A . . T . . . T . ATT . . . C
blockSeqs : . . . . . . . . G . . . AG . T AGATT C . T . . . CT C CAG A . . . . . . A . AGCTTTCTTTTT T A G CAAAC C . . . . C . . T . . . T . TCT . . . T
blockSeqs : . . . . T . . . AG . T AGATC C . T . . . CT C CAG C . . . . . . T . TTTGATTAAA T . G CATAG . . . . . A . . A . . . C . ACT . . . C
blockSeqs : . T . . . T . T CAAGA . . G . . . CT G CTG A . . . . . . A . AAACGAGGAT G . . . . . . . . . . . T . . . C . T . . . T
blockSeqs : . T . . T . . . . . T . . . CT G TAC A . . . . . . . . TTTTATAAAA C . . . . . . . . . . . T . . . . . . . . .
blockSeqs : . . . . . A . . . AT . CAG . . . . . . . . . . T
blockSeqs : . . . . . T . . . . . .
blockSeqs : . . . .
blockSeqs : . .
blockSeqCons : TGTGCTTTTGGAT**********
originalCons : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTC--ATTTT-TCTTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACACTTTCTCCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------ATTT------------GTTN-------AGGCG----AC----AACACACCGTATCTATTTT-TAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATACT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
finalCons : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTC--ATTTT-TCTTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACACTTTCTCCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCATGTGCTTTTGGAT----------ACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------ATTT------------GTTN-------AGGCG----AC----AACACACCGTATCTATTTT-TAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATACT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
14 sequences could not be aligned to this reference sequence:
Unaligned ( gi|16 ): AGGCTAGTGTCGATATATATTTCATATCTATATCCCTATATATAGTATAATAAAGACTCTTATTCTATATATAGGGATATAGCTATAAAATGCATGTTTATTGACACTAGCTTCTGTG
Unaligned ( gi|17 ): ACAGCGGCTTGTCACAATATATGTTCTATATTCTATATATAGTATAATCAAGTTTTTATTATCCTAAATATAGGGATATAGAATATATATTGTCACTATCCCCTGTG
Unaligned ( gi|18 ): ATAGGGGCTAGTGACAATGCATATTCTATATCCCCAGTATATACGAGTATAATATTATATTATACATAGGGATGTAGACTATATATTGCCACTAGCCCCTGT
Unaligned ( gi|19 ): ATAGGGACGAGTGACAATATATCTTTATATCCCTATATATAGTATAATAAAGACTTTATATAGGGATATATAAAAATATGTATTGTTAAACCCCTGTG
Unaligned ( gi|20 ): CACAGGTTCCAGTCACAATATATATTCTATATCCCTGTACATGGTATAATCTTTATAAGGATATAGCATATATAATTTGTCACTAACCCCTGT
Unaligned ( gi|21 ): ATATATATTCTAAATTCCTATATATAGTATTATAAAGACTATTAAACTATATATAGGGATATAGAATATATCTTTTGTAACTAACCCTG
Unaligned ( gi|22 ): CAAGGGCTGGTAACAATATATATTCTATATTCCTATATATAGTATACATAGGGATATAAAATATATATTGGCACTAGCCCCTGT
Unaligned ( gi|23 ): AGTGGCAAGTGTCAATATACATTTTATATCCCTATACTTTATATAAAAATATAAAATGTGTATTGACACTTGCCCCTG
Unaligned ( gi|24 ): ATAAAATGTAATAATTTGTTCAAAAGAACAGCTTAGACAAGTACATATCAATTTTACCATGCATATCT
Unaligned ( gi|25 ): TAAAGACTCTTATTATATTATATACTGGCATAATAATATACATGTATATAGTCACTAGCCCCT
Unaligned ( gi|26 ): TACAATATATAATTATTCTATATCCCTATATATATTATACTAAAGACAAAGGTA
Unaligned ( gi|27 ): CCGCGGCTAATGGCAGTATATATTTCATATTTCTATATAAAGTATAATAAAGAC
Unaligned ( gi|28 ): CAACATCAAAAGGGCTAGTGTCAATATATAGTTTATATCTATATCCCTATACTA
Unaligned ( gi|29 ): CACAGGGGCTAGTGTCCATATACACTTTATATCCCTATTTATAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 33333333333 111111 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 444444444444444444444444444444444444444444444 1111111111111 111111 1111111111 11111111111111111111111 111111 11111111 111111 11111111 444444444444 11111111 111111111 11111
lowQualScore : 88888888888 5 0 0 5 7 3 1 0 1 6 222222 1 777 777 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 8 555555555555555555555555555555555555555555555 5 33 3 4 8888888888888 1 3 1 0 44 3 111111 7777777 3 0 6666666666 1 4 4 55 4 777 4 3 99 77777777777777777777777 111111 4 1 22222222 3 4 9999 777 222222 1 66666666 555555555555 55555555 9999 9999 4 0 1 777 555555555 4 11111 4 0 2
lowQualScore : ........... . . . . . . . . . . ...... . ... ... .......................................................................................................... . ............................................. . .. . . ............. . . . . .. . ...... ....... . . .......... . . . .. . ... . . .. ....................... ...... . . ........ . . .... ... ...... . ........ ............ ........ .... .... . . . ... ......... . ..... . . .
lowQualScore : 00000000000 7 1 7 7 1 3 0 6 0 7 888888 1 888 888 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 000000000000000000000000000000000000000000000 0 00 6 4 2222222222222 4 6 0 5 66 1 999999 2222222 6 5 5555555555 0 0 0 55 0 000 0 4 55 77777777777777777777777 000000 6 1 00000000 9 4 4444 888 888888 8 11111111 666666666666 44444444 4444 4444 4 2 1 888 000000000 4 11111 4 1 7
consensus : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTC--ATTTT-TCTTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACACTTTCTCCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------ATTT------------GTTN-------AGGCG----AC----AACACACCGTATCTATTTT-TAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATACT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
Reference ( family-6046 ) : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTNTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGTCGGCATGGACGTTTC--ATTTT-TCTTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACACTTTCTCCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAN-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------ATTT------------GTTN-------AGGCG----AC----AACACACCGTATCTATTTT-TAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATACT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|1 : CAGGGTTCATACAGATAAGGACTGATAAAATTCA-----------AGCACTTTTCAAG-----------GTCAAAATTTCAATTTCAAGCACTTTAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCAG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTATATCCCAATAAAGATAACGTAAACATATGAA---CAGCA---ACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAACCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCACTTTCTTTGTACTACACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGACGTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCTGCGAATT---CAG----GGCTGTATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----GCAA-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTAAATTGCATTTGAACCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGCTATCAGCAA-TTTTTCTGCGT----GGATA---ACGAGAGAATTA------TTTATCAACTGTGTTAA--------ATTT------------GTTA-------AGGCG----AC----AACACACCGTATCTATTTT-AAAAATTAGAACAGGTAGGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCGTATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATATATT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|10 : CAGGGTTCATACAGATTAGGACCTATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGACATACATACTTAC-TGTATCTTAGGAGTTCCTGCACAACTATCCG-AGGGGC-----------------TAGTTACA-ATATTGTGTAACTTGCCC------AGCTGTCTCTCCCAATAAAGACAACGTAAACATATGAA---CAGCA---ACATA
gi|10 : -TTATTAGAAAAACATCAAAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttattagaaaaacatcaaaatt
gi|11 : cagggttcatacagattaggacctataaaattcaagcacttttcaagcacttttcaaggtcaaaatttcaatttcaagcactaaaatagatgaactcgacatacatacttactgtatcttaggagttcctgcacaactatccgaggggctagttacaatattgtgtaacttgcccagctgtctctcccaataaagacaacgtaaacatatgaacagcaacatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGAATAGATATATATACATTGCAACTATCTC------AGCTGTCTCTCCCAATAAAGATAACTTAAACATATGAA---CAGCA---ACATA
gi|11 : taaagtctttattatactatataaagggataaaCAATTC---ATAT--T------CTGTTACTTTTTTTTAAAATTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTTGTTCATTTTT-AAGCACTTTTTA-ACTGATATTACAAATGAGCACTATTCAAGGACATTTTTAAGAAATAAGCACTTCTCATTTGAAAGGTTGAAAATCAAGCTCTagaccataataaatcaattcatattctgttacttttttttaaaattcaaactcttttaaattcaagcacttttcaatgatttttgttcatttttgttcatttttaagcactttttaactgatattacaaatgagcactattcaaggacatttttaagaaataagcacttctcatttgaaaggttgaaaatcaagctct
gi|12 : taaagtctttattatactatataaagggataaagaatagatatatatacattgcaactatctcagctgtctctcccaataaagataacttaaacatatgaacagcaacataagaccataataaatCAGGGTTCATACAGATAAGGACTGATAAAATTCAAGCACTTTTCAAGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTCAATTTCAAGCATTAAAATAGATGAACTCGCCAAACATACTTAC-TGTACCTTAGGAGTTCCTGCGCAGCTATCCG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTATTCCAATAAAGACAATGTAAACATATGAA---CAGCA---ACAT
gi|13 : CAGGGTTCATACATGTAAGGACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGATCAAAATTTCAATTTCAAGCACTAAAATAGATGAACTCGCCATATATACTTAC-TG-----TAGGAGTTCCTGCACAGCTAGCCG-AGGGGC-----------------TAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTCTCTCCCAATAAAGACAATGTAAACATATGAA---CAGTA---ACA
gi|14 : TTTTT-TTTTTTTACA-TTTTAGTTTGTTTTACACAGCCAAGTAATTCCTCA-ACCTGCAATGT-------------------CTTTGCA-TTCCATTATTTACCAATTTCTTTGTACTGCACATGTTGATTCTGTGCTCATTTGCGAATTGTCGGCATGGACATTTC--ATTTT-CCTTGTGTTTC------
gi|15 : tttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaat-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACAAATTTCTTTGTACTACACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGATGTTCC--ATTTT-CATTATGTTTC------TCGCT---CT--TAT
gi|2 : GACTGATAAAATTCA-----------AGCACTTTTCAAGCACTTTTCAAGGTCAAAATTTTAATTTGAAGCACTTAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTAGGAGTTCCTGCACAGCTATCAG-AGGGGCTAGTAACAGTATTGGGATAGTTACA-ATATTGTGTAACTAGCCC------AGCTGTATATCCCAATAAAGATAACGTAAACATATGAACAGCAACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAAA-TTATTAGAAAAACATCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTACAAGTTCAGTTAGTTTCACACAACCAAGTACTCCCACA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCACTTTCTTTGTACTATACAAGTTTATCTTGTGCTCAATTGCGAATTGTCGGCATGGACGTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCCGCGACTT---CAG----GGCTGTATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----GCAG-----TGCGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTAAATTGCATTTGAACCTGTTCTCTGTATTTTGGGGTTGTCAA---ACGGGTGCTATCGGCAATTTTTTCTGCGT----GGGTA---ACGAGAGAATTA------TTTATCAACTGTGTTAA--------ATTT------------GTTA-------AGGCG----AC----AACACACCGTATTTATTTT-GAAAATTAGAACAGGTGGGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAA-------------CTTCTCTTGCGTATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATATATT------CCGTTACTATTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCGAACCTTG
gi|3 : AAAATTTCAATTTCAAACACTAAAATAGATGAACTCGCCATACATACTTAC-TGTACCTTACGAGTTCCTGCACAGCTGTCCACAGCGGCCAGTTACAATATcg
gi|3 : aggtaaTGAAACTAGCCCCTGTGCAGCTGTCTCTCCCGATAAAGATAACTTCAACATATGAA---CAGCA---ACATAatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaaTTAT-TTTTTTTACAAGTTCATTTAGTTTCATACAGACAAGTACTCCCTCA-TCCCTTAATGTTTC--AACTGAA---CAACCTTTGCA-TACCACTTATTAGCAATTTCTTTGTACTACAAAAGTTTATCTTGTGCTCATTTG-GAATTGTTGGCATGGAAG-------TTTT-TCTTGGGTTTC------T-------------TCCTG--------------------GAA-----ACTTTCTCCTATGGCAGTAATGTCTATCTTTTTCACATACACTGCACCA---AGCTTTCTTT-T---T----ATTC-----TGGGTTTCtgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaaTTTC--TTTTTATTCTGGGTTTCATTGACTCGCT---TA--TATT----GACTTAGCCAGCCATGGCTGAAAACACACTTTCCCTGA-GGCA-T--TGT-TATCCCTTT---AT-TACT--ACCA---TA--TGCTTT-T-GATAAAAACAT-----TGGATTTCCCCAGATGACGTCACTAGTTCAGAA-------AACT---------CATTTGATTCTTTTCTCTGTATTTTGGGGTTGTCAT---AAGAGCATTATattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattcttttctctgtattttggggttgtcataagagcattatgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|3 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagc-TTTCTCTGTATTTTGGGGTTGTCATAAGAGCATTA------TGT-TCA--TGC-------------ATTT------------GTTA-------GGGGGGAAGACGAAAAACATGCTGTATCTATTTT-TAAAATTAGAAGAGGTGCGCACTGGTTGCCAGCATATTGCTCTGCACAATAATGCTGGTAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCCCTTGCATATAATAAAACACGGAGTAAAATAAATGGAGAATATGGACATTTC---A-A-----------------------TTAAA-TTAAAGCACTTTTA---------------------AATGATTTTTGT-TCATTTTCAAGCAC------------TTTCCCACTCACATTAATAATAAGCACTATTTAAGGTGGATTTTAAGAAATAAGCACTTCTCATCTGAGAAGTTGAAAATCAAGCACTTTTCTAATCTCTGCAAACCTTGgttcatgcatttgttaggggggaagacgaaaaacatgctgtatctatttttaaaattagaagaggtgcgcactggttgccagcatattgctctgcacaataatgctggtaaacagatttgtcaaattgagtagtctcccttcccttgcatataataaaacacggagtaaaataaatggagaatatggacatttcaattaaattaaagcacttttaaatgatttttgttcattttcaagcactttcccactcacattaataataagcactatttaaggtggattttaagaaataagcacttctcatctgagaagttgaaaatcaagcacttttctaatctctgcaaaccttg
gi|4 : aggtaaaaaatttcaatttcaaacactaaaatagatgaactcgccatacatacttactgtaccttacgagttcctgcacagctgtccacagcggccagttacaatatatatattctatatccctatatatagtataataaagcagggatatagaatagacatatacaaatgaaactagcccctgtgcagctgtctctcccgataaagataacttcaacatatgaacagcaacatatgtacagcatcaaaattattttttttacaagttcatttagtttcatacagacaagtactccctcatcccttaatgtttcaactgaacaacctttgcataccacttattagcaatttctttgtactacaaaagtttatcttgtgctcatttggaattgttggcatggaagtttttcttgggtttcttcctggaaactttctcctatggcagtaatgtctatctttttcacatacactgcaccaagctttctttttattctgggtttcattgactcgcttatattgacttagccagccatggctgaaaacacactttccctgaggcattgttatccctttattactaccatatgcttttgataaaaacattggatttccccagatgacgtcactagttcagaaaactcatttgattctTAACTAGCCG------GGCTGTCTCTCCAAATAAAGATAACTTAAACATATCAA---CAGCA---ACA
gi|4 : a-TTTTTAGAAAAACATCGAAATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagtttatcttgtgctcatttgcgaattgacggcatagacactttcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|4 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntTTAT-TTTTTTTACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGT-------------------CTTTGCA-TCCCATTTTTGACCAGTTTCTTTGTACTACACAAGTTTATCTTGTGCTCATTTGCGAATTGACGGCATAGACACTTtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagtttatcttgtgctcatttgcgaattgacggcatagacactttcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|4 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaTTTA-TCTTGTG---C------TCATT------------TGCGAATT---GAC----GGC---ATAGACACTTTCTTCGA-GGCA-T--TGT-TATCCGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAC----ACAT-----TAGGTTTCCCCAGATGACATCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTTGGG----------------TGTTATTGGCAA-TTTTTCTGCGC----AGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------GTTTATGCAATTGTTTGTTT-------AGACG----AC----AACACAC-------ATTTT-TAAAATAAGAACAGGTGCACACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGGTTTGCCAAATTGAGCAGTCTCCCTTCTCTTGCATAAAGTAATATAGGGAGTAAAATAAATGGCGAAAATGGACATTTC---ATATTCT------CCATTACTGTTTTTTAAA-TTCAAACTCTTTCAAGCTCTTTTAAAGTACTTTTCGATGATCTTTGT-TCATTTTCAAGCACTTTTC----------CCCACTGACATTAAAAATAAGCACTATTTAAGGAAGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGAGAACCTTGtcttcgaggcattgttatccgtttattactaccatgtgcttttggacacattaggtttccccagatgacatcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcaggttatgggagaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacacatttttaaaataagaacaggtgcacactggttcccagcatgctgcactgcacaatactgctgggaaacaggtttgccaaattgagcagtctcccttctcttgcataaagtaatatagggagtaaaataaatggcgaaaatggacatttcatattctccattactgttttttaaattcaaactctttcaagctcttttaaagtacttttcgatgatctttgttcattttcaagcacttttccccactgacattaaaaataagcactatttaaggaagtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaatctgtgagaaccttgca
gi|5 : ataactagccgggctgtctctccaaataaagataacttaaacatatcaacagcaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttagaaaaacatcgaaattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaattattttttttacaacttcagttagtttcacacagccaagtactccctcagcccttaatgtctttgcatcccatttttgaccagtttctttgtactacacaagTTTTTACAATTTCAGTTAGTTT-ACACAGCCAAATACTCCGTCA-GCCCTAAATGTTTC--A---GAT---TAACCTATGCA-TCCCATTTATTACCAATTTCTTTGTACTAAACAAGTTTATCTTGTGCTCATTTGTGAATTG----CATGGACATTTC--ATTTT-TCTTATGTTTC------TCGCT---CT--TATCGTGCGACTT---CAG----GGCTGAATACATTCTTTCTCTGA-GGCA-T--TGT-TATCTGTTT---AA-T------------TT--TGATT----AAA----ACAT-----TGGGTATCCACAGATGACATCACTAGTTCGGAACACAAGCAGCTGTTA--TTGCATTTGATTCTGTTCTCTGTATTTTGGGGTTGTCAA---AAGGGTGTTATCGGCAA-TTTTTCTGCGC----GGGTT---ATTAGAGAATTA------TTTATCAATTGCGTTAA--------GTTT------------GTTT-------AGACG----AC----AACACACCATATCTTTTTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACATGGAGTTAAATAAATGGTGAAGATGGACATTTC---ATATAGTATTACACCGTAACTATTTTTTAAA-TTCAAATTCTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTTAAGCACTTTTCCCACAGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATGAGCACTT-TCATTAGAGAGGTTGAAAATAAAGCACTTTTCAAATCTGTACGAACCTTGca
gi|6 : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatactcccactccctgatttcaagaaaaaaatataAA-TTATTAGAAAAACATTAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT-TTTTTTTACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCA-GCCCTTAATGTTTC--A---GAT---CAACCTTTGCA-TCCCATTGTTTACCAATTTCTTTGTACTACACAAGTTTATCTTGTACTCAATTGCGAATTGTCGGCATGGACTTTCC--ATTTT-TATTGTGTTTC------TCGCT---CT--TATCCTGCGACTT---CAG----GGCTGAATACACATTTTTTCCGA-GGCA-T--TGT-TATCTGTTT---AT-TACT--ACCA---TG--TGCTTT-TGGAT----ACAG-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGCTTAATTGCATTTGAACCTGTTCTCTGTATTTTGCTGTTGTCAA---ACGGGTGCTATCGGCAA-TTTTTCTGCGC----GATTT---ATGAGAGAATTA------TTTATCAACTGTGTTAA--------ATTT------------GTTA-------AGGCG----AC----AACAAACCTTATCTATTTT-AAAAATTAGAACAGGTACGCACTGGTTCCCAGCATGCTGCACTGCACAATACTGCTGGGAAATAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACGGAGTAAAATAAATGGTGAAGATGGACATTTC---ATATATT------CCGTTTCTATTTTTTAAA-TACAAACTCTTTTAAATTC-----AACCACTTTTCAATGATTTTTGT-TCATTTTCAAGCACTTTTCAAGCTCTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTTTCGTTTGAGAGGTTGAAAATCAAGCACTTTTCAAATC--TGCAAACCTTGta
gi|7 : TATATTAACTCACAATACATACTTACATGCATCTTACCAGTCCCTG-A-AACTAC----AGGGGCT
gi|7 : atGTAACTTGC--------AGTTATCTCTCCAAA-AAATAGAACTTAAACATATGAA---CAGCA---Atgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|7 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactaTTTTT-TTTTTTTACAAGTTCAGTTAGTTCCACACAGACAAGTTCTCCCTCA-GCCCTTAATGTTTC--A---ACTTAACGACCTTTGCA-TCCAATTTTTCAGCAATTTCTTCATACTGCACAAGTTTTTCCTGTGCTCTTTTGCG-ATTGTTGACATGGACATTTA--ATTTT-TCTTGCATTTC------TCCCT---CT--TACCCTGTGATTT---CTG----GGCagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|7 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattTTTCTTGTTAT-TCTTG-GTTTCC-----TTGATGGACTGATATCC----ACTTAGCCAGCCACGGCTGCATACACACTTTCAGGGA-GGTA-T--CAT-TTTCCATTC---AC-TTTTG-ATCAAAACG--AG-------GAT----ACAAGTCAATGGGTTTTCCAAGTTGACATCACTAGTTCCGAACACATGCAGCTGTTCAATTTCATTTGATTCT---CTCTATATTAAGGGGTTTTCAT---AGGGCTATTATCAGCAA-CTTTTCTGCGC----AGGTT---ATGGGAGAATTACATGTATTTATCACCTCCGTTAAGTTCATGCATTT------------GTTACGAGAAAAGATG----AA----AACATGCTGCATTTATTTT-TAGAATTAGAAactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagctttcttgttattcttggtttccttgatggactgatatccacttagccagccacggctgcatacacactttcagggaggtatcattttccattcacttttgatcaaaacgaggatacaagtcaatgggttttccaagttgacatcactagttccgaacacatgcagctgttcaatttcatttgattctctctatattaaggggttttcatagggctattatcagcaacttttctgcgcaggttatgggagaattacatgtatttatcacctccgttaagttcatgcatttgttacgagaaaagatgaaaacatgctgcatttatttttagaattagaa
gi|8 : attatattaactcacaatacatacttacatgcatcttaccagtccctgaaactacaggggcttgaggggcatgtcccaaacaaaattttgagctcacgttttttttaatatatgtatttgaaataaaatattttgtccgggacaagcccatgttgaaactagtaacttgcagttatctctccaaaaaatagaacttaaacatatgaacagcaaagcaagaacagcatcaattttttttttttttacaagttcagttagttccacacagacaagttctccctcagcccttaatgtttcaacttaacgacctttgcatccaatttttcagcaatttcttcatactgcacaagtttttcctgtgctcttttgcgattgttgacatggacatttaatttttcttgcatttctccctcttaccctgtgatttctgggcactctttcccatatctcacagcagtgatgtatgtatctcttttacatacacagcaccaagcTTT-TTTTTTTACA-TTTTAGTTTGTTTTACACAGCCAAGTAATTCCTCA-ACCTGCAATGT-------------------CTTTGCA-TTCCATTATTTACCAATTTCTTTGTACTGCACATGTTGATTCTGTGCTCATTTGCGAATTGTCGGCATGGACATTTC--ATTTT-CCTTGTGTTTC------TCTGT---CT--TATCGTTCGACTT---TAC----GGCCAAATACACACTTTCTCTGA-GGCA-T--TGC-TATCCGTTT---AT-TACT--ACCA------------------------CAC-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGAACACAATCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTTGGG----------------TGTTATCGGCAA-ATTTTCTGCGC----GGGTT---ATGGGAGAATTA------TTTATCAACTGCGTTAA--------GTTTATGCAATTTTTTGTTT-------AGACA----AC----AACTAACCGTATCTATTTT-TAAAATTAGAACAGGTGTGCATTGGTTCCCAGCATGCTGCACTGCACAATACTGCTCGGAAACAGATTTGTCAAACTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACAGAGTAAAATAAATGGCGAAGATGGACATTTC---ATATTCT------ATGTTACTGTTTTTTAAA-TTCAAACTCTTTTAAATTC-----AAGCAATTTTCAATGATTTTTTTATCAATTTTAAGCATTTTTCAAGCACTTTTCCCACTGACATTAAAAATAAGCACTATTCAAGGATGTTTTTAAGAAATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGTGCAAACCTTG
gi|9 : CTCATGCTCTCAGCGTTTCCAA---GA-----AA---TTCCAATCCCATTTCTTACCAATTTCTTTGTACTACATAAGTTTATCTTGTGCTCATTTGCGAATTGTCAGCATGAACGTTTC--ATTTT-TCTTATGTTTC------TTGCT---AT--TATCGTGCAATTT---CAG----GGCTGAATACACACTTTCTCAGA-GGCA-T--TGT-TATCCGTTT---AT-T------------------TTTTATAAAA----ACAT-----TGGGTTTCCCCAGATGACGTCACTAGTTCAGACCACAAGCAGCTGTTA--TTGTATTTGATTCTGTTCTCTGTATTTTGGGGTTGT--ATTTATGG-TGTTATTGGCAA-TTTTTCTGCGG----GGGTT---ATGGGAGAATTA-----------------------------------------------GTTT-------AAACG----AC----AACACATCGTATCTATTTT-TAAAATTAGAACAGGTATGCACTGGTTCCAAGCATGCTGCACTGCACAATACTGCTGGGAAACAGACTTGTCAAATTGAGTTGTCTCCCTTCTCTTGCATATAGTAAAATAAGGAGTTAAATAAATGGCGAAGCTGGACATTTCATAATATACT------CCATTATTATTTTTTAAA-TTCAAACTGTTTTAAATTC-----AAGCACTTTTCAATGATTTTTGT-TCATTTTCAAGTACCTTTCAAGCACTTTTCCCACTGACATTAAAAAGAAGCACTATTCAAGGATGTTTTTAAGAAATAATCACTTTTCATTTGAAAt
14 sequences could not be aligned to this reference sequence:
Unaligned ( gi|16 ): AGGCTAGTGTCGATATATATTTCATATCTATATCCCTATATATAGTATAATAAAGACTCTTATTCTATATATAGGGATATAGCTATAAAATGCATGTTTATTGACACTAGCTTCTGTG
Unaligned ( gi|17 ): ACAGCGGCTTGTCACAATATATGTTCTATATTCTATATATAGTATAATCAAGTTTTTATTATCCTAAATATAGGGATATAGAATATATATTGTCACTATCCCCTGTG
Unaligned ( gi|18 ): ATAGGGGCTAGTGACAATGCATATTCTATATCCCCAGTATATACGAGTATAATATTATATTATACATAGGGATGTAGACTATATATTGCCACTAGCCCCTGT
Unaligned ( gi|19 ): ATAGGGACGAGTGACAATATATCTTTATATCCCTATATATAGTATAATAAAGACTTTATATAGGGATATATAAAAATATGTATTGTTAAACCCCTGTG
Unaligned ( gi|20 ): CACAGGTTCCAGTCACAATATATATTCTATATCCCTGTACATGGTATAATCTTTATAAGGATATAGCATATATAATTTGTCACTAACCCCTGT
Unaligned ( gi|21 ): ATATATATTCTAAATTCCTATATATAGTATTATAAAGACTATTAAACTATATATAGGGATATAGAATATATCTTTTGTAACTAACCCTG
Unaligned ( gi|22 ): CAAGGGCTGGTAACAATATATATTCTATATTCCTATATATAGTATACATAGGGATATAAAATATATATTGGCACTAGCCCCTGT
Unaligned ( gi|23 ): AGTGGCAAGTGTCAATATACATTTTATATCCCTATACTTTATATAAAAATATAAAATGTGTATTGACACTTGCCCCTG
Unaligned ( gi|24 ): ATAAAATGTAATAATTTGTTCAAAAGAACAGCTTAGACAAGTACATATCAATTTTACCATGCATATCT
Unaligned ( gi|25 ): TAAAGACTCTTATTATATTATATACTGGCATAATAATATACATGTATATAGTCACTAGCCCCT
Unaligned ( gi|26 ): TACAATATATAATTATTCTATATCCCTATATATATTATACTAAAGACAAAGGTA
Unaligned ( gi|27 ): CCGCGGCTAATGGCAGTATATATTTCATATTTCTATATAAAGTATAATAAAGAC
Unaligned ( gi|28 ): CAACATCAAAAGGGCTAGTGTCAATATATAGTTTATATCTATATCCCTATACTA
Unaligned ( gi|29 ): CACAGGGGCTAGTGTCCATATACACTTTATATCCCTATTTATAT