lowQualScore : 111111111111111 111111111111111 11111111111111111111111111111111111111111111111111111111111111 333333333333333333333333333333333333333333333333333333333333 11111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 1 1 1 111111111111111 1 22 1 11 222 1 1 222222222222222 55555 1 1 77777777777777777777777777777777777777777777777777777777777777 1 2 222222222222222222222222222222222222222222222222222222222222 77777777777777777 1 1 1 1 1 1 1 3 11 1 1 00000 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 5 5 6 7 7 5 5 6 222222222222222 3 99 1 7 33 6 555 0 6 6 5 0 555555555555555 00000 3 4 5 6 6 3 6 6 2 11111111111111111111111111111111111111111111111111111111111111 5 6 7 777777777777777777777777777777777777777777777777777777777777 00000000000000000 0 2 2 2 5 3 8 0 5 0 2 0 2 5 0 6 2 33 1 6 1 3 6 7 3 00000 3 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 6 8 1 6 0 5
lowQualScore : . . . . . . . . ............... . .. . . .. . ... . . . . . ............... ..... . . . . . . . . . .............................................................. . . . ............................................................ ................. . . . . . . . . . . . . . . . . . .. . . . . . . . ..... . ............................................................................................................................... . . . . . .
lowQualScore : 0 0 0 0 0 0 0 0 000000000000000 3 33 0 0 33 7 333 7 7 7 0 5 000000000000000 00000 0 0 0 0 0 3 0 0 5 00000000000000000000000000000000000000000000000000000000000000 0 0 8 555555555555555555555555555555555555555555555555555555555555 55555555555555555 0 2 0 2 0 2 8 2 5 0 5 8 8 0 0 0 0 00 8 0 8 5 0 5 5 00000 5 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 2 7 0 7 7
consensus : AGAAAACTGAGATAGGGCGAAAGGAGTGAAACAGTTATAGTTGGATAATTTCTTTCTACAATAAGTGGTTGTAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCGTTTTTATTTTATTTATTTATTTTTTTTAA-ATAATACCGCT--GTTTAATAACGATATGAACCCACCGCGCGATGGCAACACTATAATATTGTTACGCAAANCTAA--CTATCATTTCATTCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGGAGAGTCTAGCGTAACAAGTTTTGTTAAAGGTGNGTTTATAAGTAATGTATGGCATTGTNATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGCATTGAAAGAGAAAGANGAAAAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTT-ACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTTGAACAGTATCGTGTTTTGGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTTTATTTT--TTATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATNCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
Reference ( gi|1 ) : AGACAACTGAGATAGGGAGAAAGGAGTGAAATAGTTATAGTTGGATAAATTCATTCTACAATAACTGGTGGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTTATCT-----ATTTAGTTTTTTTAA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGACAACACTATTATATTATTACACAAAGCTAA--ATACCATTTCATTCCAACTTGATGTTATATTCCTTTAATTGATGCGCTACTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCCTGTTACTTTGATATAC-TGTATACTTATTTTCTTACTATAGGAGTATTAAAAGAGAAAGAGGAAAAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGGGATTGATAGAGCACTGCATAAACAACAGGACTTTTCATTTCAACTAACATGTACTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTG-------------GT-------------------G------AAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT--TTATTTGTTTTTA-TTAAATTATTATCAAATCTATTGGATGTAATGGAACGTTTTATATGTATATGCAAATAATTTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCTATTGTTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTGCTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCT-AATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAAGTTGATGCTATTTTGACGAATTCGGGTTGAAGCGATTTAAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCTATATCTGAATCGTCGGTATTAGATTTGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGCATTATTTTCTTGTGCCAAAGC-----ATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAATATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTTTAAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACTGCGAACTTTTTATATGAGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
gi|2 : AGAAAACTGAGATAGGGCGAAAGGAGTGAAACAGTTATAGTTGGATAATTTCTTTCTACAATAAGTGGTTATAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCGTTTTTATTTTATTTATTTATTTTTTTTAA-ATAATACTGCT--GTTTAATAACGATATGAACCCACCGTGTGATGACAAGACTATAATATTGTTACACAAACCTAA--CTATCATTTCATTCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTAGTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGCATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTGTTTTCTTACTATAGAAGCATTGAAAGAGAAAGAGGAAAAGTCAACTGAGCGAAT
gi|11 : GTAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCATTTTT---------------TTTTTAAAA-AAAATACTGCTT-GTTTAATATCGATATGAACCCACCGCGTGATGGTAACAGTATAATATTGTTACACAAAGCTAA--CTATAATTTCATTCAAACTTGATGTTATATTTCTTTAATTGCTGCGCTATTTTGGTCCACGGAGAGTCTAGCGTAACAAGTTTTGTTAAAGGTGGGTTTATAAGTAATGTATGGTATTGTTATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttgatagaacactgcataaacaacaggaattttcatttcaactaacatgtgctgaagtttttactctttatttgaatatgacacatattgattgaacagtatcatgttttgaaagctaataacaaatttaccttatgaatgaactactatacaatacacattattgctattttacttttttattaaattatcatcaaatctattagatgtagttgaacgttttatatgtatatgcaaataatctcagacaactcatgctataactactaattacaaacaagaaacataaaaaaaattatgtttttctacagaaaatatcatcataacaaatgtttatgtacgaattcagcgattggtggtaatgtcaggcggattatactccttaaacactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcttcactcttgaaatcgtcttcttctttcagttgtctggctgtccgtttgatagcagtatgaatggtatcttttcttatcgaatcgaaccataaaaccctgaataaatatttatcgataagaagctttctgtatttcggcaatagttcgttgaatgccttttttattgcttgcttttcattcagttcatcgtcgttcacaaaatttgatgctattttgtcgaattcgagctgaagcgattttaatgcataatcaaccatgtctattgtttcttccttattatctgagtctgattccatatttgaaacgtcggtattagattcgtcggtaagttcttctttctccagctcttcctaggaactatcgtctccgtgtattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggccgatagcctcgacgacagcaaactactgaatgatttgttcacttttattaattccttatatatatataaagtattggtatta
gi|14 : TTTAACATAATACCGATAAGTTTTATAACGATTTGATTCCACCATGCGATTGCAACACTATAATATTG-CATGCAACTTTAAGCAAACCATTT-ATATCAACTTCATATTA
gi|3 : TATACCTATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGACGAAAAGTCAACTAAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGTATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTAT-ACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGT-------------------GTTTTGAAAGCTAATACAATTAAATGGATAACAAATTTACCTTATGAATGAACTATAATACAATACACATTATTGCTATTT----------ATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAAAGTTTTATATGTATATGCAAATAATATCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATTTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCCATTGGAAGTAATGTCAGGCGGATTTATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCATCTCTCTCGAAATCGTCTTTTTCTTTCAGTCGCCTGGCAGTCCGTTTGATAGTAGTATGAATGGTATATTTTCTCATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTATCTGTATTTCGGCAAAAGTTCGTTCAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGTTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAACGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCTTATCTGAATAGTCTTTATTAGTTTCGTCGGTAAGTTCGTCTTTCTTCAGCTTTTCCTCGGAACTATCGTCTCTGCGAATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGA
gi|4 : ATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTGACATGTGCTGAAGTTTTT-ACTCTTTATTTGAATATAACACATATTG-------------ATTGAACAGTATCGTATTTTGA------AAGAT--------------GATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTT-ATTT-----ATTT---TTTA-TTAAATTATCAACAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAAT---CTCAGACAACTCATGCTATAACTACTAATTACAAACAATA-AACATAAAGATA-TTATGTTTTCCTACAGAAAATATCATCATAACGAATGTTTATATACGAATTGAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCATTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCTG-AATAAATATTGATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTTACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAACTCTTCCTCGGAACTATCGTCTCCGTGTATTATGTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGAtttgttcacttttaattcatatatatatataaagtattggcataaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatatttgaaagacatgagtgttacatactagtaaactctgagttaccgcaaactttttatatgggcatagaatgtgcacatcacattttatttgttggttgcatactattatgtactgaagtttaatctta
gi|2 : gtTTGATAGAACACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTT-ACTCTTTATTTGAATATGACACATATTG-------------ATTGAACAGTATCATGTTTTGA------AAGCT--------------AATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTTTACTTT--TT---------TA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAAGA-AACATAAAAAAAATTATGTTTTTCTACAGAAAATATCATCATAACAAATGTTTATGTACGAATTCAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAACACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTTGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTATTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATTTGATGCTATTTTGTCGAATTCGAGCTGAAGCGATTTTAATGCATAATCAACCATGTC------------TATTGTTTCTTCCTTATTATCTGAGTCTGATTCCATATTTGAAACGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTAGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCCGATAGCCTCGACGACAGCAAACTACTGAATGAtttgttcacatttaattaattccttatatataaataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatttaaagacatgagtgttacatactagtattctccgagttaccgcgaactttttatatggacatataatgtgaacatcacattttattttattggttgcatacatttcgctttagtaacgctatttaatgttat
gi|5 : agaaaactgagatagggcgaaaggagtgaaacagttatagttggataatttctttctacaataagtggttataataccattgtcgattcctctaaatgtaaataacatacgcttcttaactaactcgtttttattttatttatttattttttttaaataatactgctgtttaataacgatatgaacccaccgtgtgatgacaagactataatattgttacacaaacctaactatcatttcattcaaacttgatgttatattcctttaattgctgcgctagtctggtccacggaagtttaagatgtgtttataagtaatgtatggcattgtaatgtatgatgtgcatgtcactttaatatactatatacttgttttcttactatagaagcattgaaagagaaagaggaaaagtcaactgagcgaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAGTTTTTTACTCTTTATTTGAATGTAACACATATTGATTGAACAGTATCGT-------------------GTTTTGAAAGCT--------------GATAACAAATTTACCTTATGGATGAACTATTATACAATACACATTATTGCTATTTTATTTTATTTTTTTTTTTTTAATTTAATTATTATCAAATCTATTGGATGTAATTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TGATGTTTTCCTACAGAAAATATCGTCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGGGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGGTAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAACACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAAGCTGATGCTATTTTGACGAATTCGTGCTGAAGCGATTTAAATGCATAGTCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCTATATTTGAATCGTCGGTATTAGATTCGTCAGTAAGTTCTTCTTTCTGCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCAAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTAATGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTAAAAGACATGAGTGTTATATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGACAtttgttcacttttattaattccttatatatatataaagtattggtatta
gi|9 : TTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGGAGCTTTTTGTATTTCGGCAATAGTTCGTTGAATGCCTTTCTTCTTGCTTGCTTTTCATTCAGTCCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGCATAAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCTGAACTATCGTCTCCGTGTGTTATTTTCTTGTGCCGAAGCATATTATCTTTTCGTTTATACTCCTTTTTACATAGATCGCAGGCGAACAACCTCGGCGACAGCAAACTACTGAATGA
gi|8 : CAAGGGTCTGTTGTTTCTTCCTTTTCTTCCGAGTCTGATTCCATATCTGAATCGTCGGTATGAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGCCGAACATCCTCGGCGACAGCTAACTACTGAATGAtttgttcacttttaattaattccctatatatatataaagtattggcatgaccag
gi|4 : TAAATTTAAA-GACATGAGTGTTACATACTAGTATTCTCCGAGTTACCGCGAACTTTTTATATGGACATATAATGTGAACATCACATTTTATTTTATTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATtttgttcacttttaattataatataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatttaaaagacatgagtgttacatactagtatactccgagttaccgcgaactttttatatggacatctaatgtgaacatcacattttattttgttggttgcatacatatcgatttagtaacgctatttaatgttatca
gi|8 : gtattgatagagcactgcataaacaacaggaattttcatttcaactgacatgtgctgaagtttttactctttatttgaatataacacatattgattgaacagtatcgtattttgaaagatgataacaaatttaccttatgaatgaactactatacaatacacattattgctatttatttattttttattaaattatcaacaaatctattagatgtagttgaacgttttatatgtatatgcaaatctcagacaactcatgctataactactaattacaaacaataaacataaagatattatgttttcctacagaaaatatcatcataacgaatgtttatatacgaattgagcgattggtggtaatgtcaggcggattatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcttcactctcgaaatcgtcttcttctttcagttgtctggctgtccgtttgatagcattatgaatggtatcttttcttatcgaatcgaaccataaaacctgaataaatattgatcgataagaagctttctgtatttcggcaatagttcgttgaatgccttttttcttgcttgcttttcattcagttcatcgtcgtttacaaaatctgatgctattttgtcgaattcgggctgaagcgattttaatgcataatcaaccatgtcgtaccaagggtctattgtttcttccttttcatccgagtctgattccatatctgaatcgtcggtattagattcgtcggtaagttcttctttctccaactcttcctcggaactatcgtctccgtgtattatgttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggcgaacatcctcggcgacagcaaactactgaatgatttgttcacatttaattaattccttatatataaataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAAATTTAAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGACATCTAATGTGAACATCACATTTTATTTTGTTGGTTGCATAC-ATATCGATTTAGTAACGCTATTTAATGTTATCA
gi|10 : caagggtctgttgtttcttccttttcttccgagtctgattccatatctgaatcgtcggtatgagattcgtcggtaagttcttctttctccagctcttcctcggaactatcgtctccgtgtattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacagccgaacatcctcggcgacagctaactactgaatgatttgttcacttttaattataatataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACAGCAAACGTTTTATAAGGGCATAGAATGTGCACATAACATTTTATTTTGTTGGTTGCATAA-ATTTCGCATTAGTAACGCTATTTAATGTTATCAAA
gi|6 : AATTTGAAAGAAATGAGTGTTACATACTAGTATACTCCCAGTTACCGCAAACGTTTTATAAGGGCATACAATGTGCACATCATATTTTATTTTATTGGTTGCATAC-ATTTCGCTTTAGTAACGCTTTTTAATGTTATCAAAtaagtttaaaataatatgttatgttttgtaactcttcaaccactttttgttggctccttgtttctaaagtctatgcataagaagtgtagagttaattcatttaaataaggagttaaaactaaatcctcaatgttgacagattacctataacatactggtcgaaatatcatcagtgcgcttatatttctttatcaaataccccccatctgttgtc
gi|3 : TTTGAAAGACATGAGTGTTACATACTAGTAAACTCTGAGTTACCGCAAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTA-TTTGTTGGTTGCATACTATTtaagtttaaaataatgtgttatgttttgtaactcttcaaccactttttgttggctccttgtttttaaagtctatgcattagaagtgtagagtaaactcatttaaatgaggagttaaaactaaatcctcaaagttgacagattacctataacatactggtcgaaatatcatcagtgcgcttatatttctttatcaaataccagcatctgttgtcttgtacacatgtttgccttaagcaaactgatctatacgatactttaagtatatacaaattggaatatgtatacccattatttatgtaggctataagtttagccacaaaatttacttcgacgattactcttaaagttaatttggtcatatattccaaacttcatctaattattattgttacgccgttaaaataatttaactgcaattaagcttcattcaaataagacaatcatttaatagcttttaaga
gi|15 : tatacctatatacttattttcttactatagaagtattaaaagagaaagacgaaaagtcaactaagcgaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccggggattgatagagcactgtataaacaacaggaattttcatttcaactaacatgtgctgaagtttatactctttatttgaatataacacatattgattgaacagtatcgtgttttgaaagctaatacaattaaatggataacaaatttaccttatgaatgaactataatacaatacacattattgctatttattttttttattaaattatcatcaaatctattagatgtagttgaaagttttatatgtatatgcaaataatatcagacaactcatgctataactactaattacaaacaacataacataaaaatattattttttcctacagaaaatatcatcataacaaatgtttatatccgaatttagccattggaagtaatgtcaggcggatttatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcatctctctcgaaatcgtctttttctttcagtcgcctggcagtccgtttgatagtagtatgaatggtatattttctcatcgaatcgaaccataaaaccctgaataaatatttatcgataagaagctatctgtatttcggcaaaagttcgttcaatgccttttttcttgcttgcttttcattcagttcatcgtcgttcacaaaatctgatgttattttgtcgaattcgggctgaagcgattttaatgcataatcaaccatgtcgtaccaacggtctattgtttcttccttttcatccgagtctgattccttatctgaatagtctttattagtttcgtcggtaagttcgtctttcttcagcttttcctcggaactatcgtctctgcgaattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggcgaacatcctcggcgacagcaaactactgaatgatttgttcacttttaattcatatatatatataaagtattggcataaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntataTTAAAAGACATGAGTGTTATATACTAGTATACTCCGAGTTA------ACTTTTTATATGGACATAGAATGTGCACATCACATTTTATTTTGTTatgtactgaagtttaatctta
gi|12 : aacTGAAAGACATGGGTGTTACATACTAGTATACTCCGAGTTACCGCGAACGTTTTATATGGGTATCGAATGTGCACATCACATTTTATTTTATTGGTTGTATAC-ATTTCGCTTTAGTAACGCTGTTTAATGTTATCAAA
gi|16 : AAAGACATGAGTGTTACATATTAGTATACTCCGAGTTACCGCGAACGTTTTAtaagtttaaaataatgtgttacgttttgatactcttcaaccactttttgttgactccttgtttctgaagtctatgcat
gi|7 : gATAC-CTTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|13 ): CTATTTAATGTTATCAAATAAATTTAAAATAATGTGTAATGTTTTTTAAATCTTCAAGCTCTTTTTGCTAACTCCTTGTTTCTAAAGTCAATGCATTAAAAGTGTACAGTTAAATCATTTAAATGAGCAGTTAAA
Alignments
lowQualScore : 11111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111 2222222222222222222 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111 11 1 1 2222 11 1 11111111111111111111111111 1 1 222222222222222222222222222222222222222222222222222222222222222 111111 4444444444444444444 44444444444444 1 2222222 1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 3 2 4 4 2 3 22222 11 5 0 2 4444 2 2 3 2 1 2 33 2 0 9 1 55555555555555555555555555 0 1 0 1 0 0 0 7 4 7 6 999999999999999999999999999999999999999999999999999999999999999 8 6 1 999999 5555555555555555555 0 77777777777777 0 6666666 8 5 8 0 0 8 1 8 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 1 0 5
lowQualScore : . . . . . . ..... .. . . . .... . . . . . . .. . . . . .......................... . . . . . . . . . . . ............................................................... . . . ...... ................... . .............. . ....... . . . . . . . . ............................................................................................................................... . . .
lowQualScore : 0 5 0 0 5 0 00000 33 3 0 0 8888 0 0 2 0 0 5 88 5 0 2 0 77777777777777777777777777 7 0 7 0 0 7 7 3 0 3 7 777777777777777777777777777777777777777777777777777777777777777 0 7 7 222222 4444444444444444444 8 00000000000000 6 8888888 0 6 0 8 6 0 0 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 4 6 0
consensus : AGANAACTGAGATAGGGNGAAAGGAGTGAAACAGTTATAGTTGGATAANTTCNTTCTACAATAANTGGTNGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-TTTTATCTATTTA-TTTTTTTAA-ATAATACTGC-T--GTTTAATAACGATATGAACCCACCGTGTGATGGCAACACTATAATATTGTTACGCAAANCTAANT--ACCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGGA--------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGA-GAAAAGTCAACTGAGCGAAT------NNNNNNAAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAG-TTTTT-ACTCTTTATTTGAATATAACACATATTGA------TTGAACAGTATCGT-------------------GTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT---TTATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
Reference ( family-4921 ) : AGAAAACTGAGATAGGGCGAAAGGAGTGAAACAGTTATAGTTGGATAATTTCTTTCTACAATAAGTGGTTGTAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCGTTTTTATTTTATTTATTTATTTTTTTTAA-ATAATACCGC-T--GTTTAATAACGATATGAACCCACCGCGCGATGGCAACACTATAATATTGTTACGCAAANCTAACT--ATCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGGAGAGTCTAGCGTAACAAGTTTTGTTAAAGGTGNGTTTATAAGTAATGTATGGCATTGTNATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGCATTGAAAGAGAAAGANGAAAAGTCAACTGAGCGAAT------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAG-TTTTT-ACTCTTTATTTGAATATAACACATATTGA------TTGAACAGTATCGTTGAACAGTATCGTGTTTTGGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTTTATTTT---TTATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATNCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
gi|1 : AGACAACTGAGATAGGGAGAAAGGAGTGAAATAGTTATAGTTGGATAAATTCATTCTACAATAACTGGTGGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGT-----TTTTATCTATTTAGTTTTTTTAA-ATAATACTGCTT--GTTTAATAACGATATGAACCCACCGTGTGATGACAACACTATTATATTATTACACAAAGCTAAAT--ACCATTTCAT-TCCAACTTGATGTTATATTCCTTTAATTGATGCGCTACTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCCTGTTACTTTGATATAC-TGTATACTTATTTTCTTACTATAGGAGTATTAAAAGAGAAAGAGGAAAAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGGGATTGATAGAGCACTGCATAAACAACAGGACTTTTCATTTCAACTAACATGTACTGAAGTTTTTT-ACTCTTTATTTGAATATAACACATATTGG-------TGAA
gi|1 : -ACTTTTCATTTCAAC-TAACATGTACTGAAGTTTTTTACTCTTTAT--TTGAATA-TAACACATATTGGT----GAAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT---TTATTTGTTTTTA-TTAAATTATTATCAAATCTATTGGATGTAATGGAACGTTTTATATGTATATGCAAATAATTTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCTATTGTTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTGCTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCT-AATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAAGTTGATGCTATTTTGACGAATTCGGGTTGAAGCGATTTAAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCTATATCTGAATCGTCGGTATTAGATTTGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGCATTATTTTCTTGTGCCAAAGC-----ATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAATATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTTTAAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACTGCGAACTTTTTATATGAGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAAgctgataacaaatttaccttatgaatgaactattatacaatacacattattgctattttattttttatttgtttttattaaattattatcaaatctattggatgtaatggaacgttttatatgtatatgcaaataatttcagacaactcatgctataactactaattacaaacaacataacataaaaatattatgttttcctacagaaaatatcatcataacaaatgtttatatccgaatttagctattgttggtaatgtcaggcggattatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtgcttccaggactcttcactctcgaaatcgtcttcttctttcagttgtctggctgtccgtttgatagcagtatgaatggtatcttttcttatcgaatcgaaccataaaaccctaataaatatttatcgataagaagctttctgtatttcggcaatagttcgttgaatgccttttttcttgcttgcttttcattcagttcatcgtcgttcacaaaagttgatgctattttgacgaattcgggttgaagcgatttaaatgcataatcaaccatgtcgtaccaagggtctattgtttcttccttttcatccgagtctgattctatatctgaatcgtcggtattagatttgtcggtaagttcttctttctccagctcttcctcggaactatcgtctccgtgcattattttcttgtgccaaagcatctttacgtttatactcctttttacaaagatcacaggcgaatatcctcggcgacagcaaactactgaatgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagtttaaaagacatgagtgttacatactagtatactccgagttactgcgaactttttatatgagcatagaatgtgcacatcacattttattttgttggttgcatacatttcgctttagtaacgctatttaatgttatcaaa
gi|10 : agacaactgagatagggagaaaggagtgaaatagttatagttggataaattcattctacaataactggtggtaataccattgtcgattcctctaaacgtaaataacatacgcttcttaactaactcgtttttatctatttagtttttttaaataatactgcttgtttaataacgatatgaacccaccgtgtgatgacaacactattatattattacacaaagctaaataccatttcattccaacttgatgttatattcctttaattgatgcgctactctggtccacggaagtttaagatgtgtttataagtaatgtatggtattgtaatgtatgatgtgcctgttactttgatatactgtatacttattttcttactataggagtattaaaagagaaagaggaaaagtcaactgagcgaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccggggattgatagagcactgcataaacaacaggAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACAGCAAACGTTTTATAAGGGCATAGAATGTGCACATAACATTTTATTTTGTTGGTTGCATAA-ATTTCGCATTAGTAACGCTATTTAATGTTATCAAA
gi|11 : GTAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCATTTTTTTTTTA-------A--------AA-AAAATACTGC-TT-GTTTAATATCGATATGAACCCACCGCGTGATGGTAACAGTATAATATTGTTACACAAAGCTAACT--ATAATTTCAT-TCAAACTTGATGTTATATTTCTTTAATTGCTGCGCTATTTTGGTCCACGGAGAGTCTAGCGTAACAAGTTTTGTTAAAGGTGGGTTTATAAGTAATGTATGGTATTGTTATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATtaagtttaaaataatatgttatgttttgtaactcttcaaccactttttgttggctccttgtttctaaagtctatgcataagaagtgtagagttaattcatttaaataaggagttaaaactaaatcctcaatgttgacagattacctataacatactggtcgaaatatcatcagtgcgcttatatttctttatcaaataccccccatctgttgtc
gi|12 : TGAAAGACATGGGTGTTACATACTAGTATACTCCGAGTTACCGCGAACGTTTTATATGGGTATCGAATGTGCACATCACATTTTATTTTATTGGTTGTATAC-ATTTCGCTTTAGTAACGCTGTTTAATGTTATCAAA
gi|14 : TTTAACATAATACCGA-TAAGTTTTATAACGATTTGATTCCACCATGCGATTGCAACACTATAATATTG-CATGCAACTTTAAGCAAACCATTT-ATATC-AACTTCATATTAtaagtttaaaataatgtgttacgttttgatactcttcaaccactttttgttgactccttgtttctgaagtctatgcat
gi|15 : AACTTAAAAGACATGAGTGTTATATACTAGTATACTCCGAGTTA------ACTTTTTATATGGACATAGAATGTGCACATCACATTTTATTTTGTT
gi|16 : GAAAGACATGAGTGTTACATATTAGTATACTCCGAGTTACCGCGAACGTTTTA
gi|2 : AGAAAACTGAGATAGGGCGAAAGGAGTGAAACAGTTATAGTTGGATAATTTCTTTCTACAATAAGTGGTTATAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCGTTTTTATTTTATTTATTTATTTTTTTTAA-ATAATACTGC-T--GTTTAATAACGATATGAACCCACCGTGTGATGACAAGACTATAATATTGTTACACAAACCTAACT--ATCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTAGTCTGGTCCACGGA---------------AGTTT-----AAGATGTGTTTATAAGTAATGTATGGCATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTGTTTTCTTACTATAGAAGCATTGAA------AGA-GAAA--------GAG-GAA-------------AAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATAGAACACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAG-TTTTT-ACTCTTTATTTGAATATGACACATATTGA------TTGAACAGTATCAT-------------------GTTTTGAAAGCT--------------AATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTTTACTTT---TT---------TA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAAGA-AACATAAAAAAAATTATGTTTTTCTACAGAAAATATCATCATAACAAATGTTTATGTACGAATTCAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAACACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTTGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTATTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATTTGATGCTATTTTGTCGAATTCGAGCTGAAGCGATTTTAATGCATAATCAACCATGTC------------TATTGTTTCTTCCTTATTATCTGAGTCTGATTCCATATTTGAAACGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTAGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCCGATAGCCTCGACGACAGCAAACTACTGAATGA
gi|3 : TATACCTATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGACGAAAAGTCAACTAAGCGAAT------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGGGATTGATAGAGCACTGTATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAG-TTTAT-ACTCTTTATTTGAATATAACACATATTGA------TTGAACAGTATCGT-------------------GTTTTGAAAGCTAATACAATTAAATGGATAACAAATTTACCTTATGAATGAACTATAATACAATACACATTATTGCTATTT-----------ATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAAAGTTTTATATGTATATGCAAATAATATCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATTTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCCATTGGAAGTAATGTCAGGCGGATTTATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCATCTCTCTCGAAATCGTCTTTTTCTTTCAGTCGCCTGGCAGTCCGTTTGATAGTAGTATGAATGGTATATTTTCTCATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTATCTGTATTTCGGCAAAAGTTCGTTCAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGTTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAACGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCTTATCTGAATAGTCTTTATTAGTTTCGTCGGTAAGTTCGTCTTTCTTCAGCTTTTCCTCGGAACTATCGTCTCTGCGAATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGAtttgttcacttttattaattccttatatatatataaagtattggtatta
gi|3 : TATATTTGAAAGACATGAGTGTTACATACTAGTAAACTCTGAGTTACCGCAAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTA-TTTGTTGGTTGCATACTATTtttgttcacttttaattcatatatatatataaagtattggcataaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatatttgaaagacatgagtgttacatactagtaaactctgagttaccgcaaactttttatatgggcatagaatgtgcacatcacattttatttgttggttgcatactattatgtactgaagtttaatctta
gi|4 : tatacctatatacttattttcttactatagaagtattaaaagagaaagacgaaaagtcaactaagcgaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccggggattgatagagcactgtataaacaacaggaattttcatttcaactaacatgtgctgaagtttatactctttatttgaatataacacatattgattgaacagtatcgtgttttgaaagctaatacaattaaatggataacaaatttaccttatgaatgaactataatacaatacacattattgctatttattttttttattaaattatcatcaaatctattagatgtagttgaaagttttatatgtatatgcaaataatatcagacaactcatgctataactactaattacaaacaacataacataaaaatattattttttcctacagaaaatatcatcataacaaatgtttatatccgaatttagccattggaagtaatgtcaggcggatttatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcatctctctcgaaatcgtctttttctttcagtcgcctggcagtccgtttgatagtagtatgaatggtatattttctcatcgaatcgaaccataaaaccctgaataaatatttatcgataagaagctatctgtatttcggcaaaagttcgttcaatgccttttttcttgcttgcttttcattcagttcatcgtcgttcacaaaatctgatgttattttgtcgaattcgggctgaagcgattttaatgcataatcaaccatgtcgtaccaacggtctattgtttcttccttttcatccgagtctgattccttatctgaatagtctttattagtttcgtcggtaagttcgtctttcttcagcttttcctcggaactatcgtctctgcgaattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggcgaacatcctcggcgacagcaaactactgaatgatttgttcacttttaattcatatatatatataaagtattggcataaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTGACATGTGCTGAAG-TTTTT-ACTCTTTATTTGAATATAACACATATTGA------TTGAACAGTATCGT-------------------ATTTTGAAAGAT--------------GATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTT-ATTT------ATTT-TTT--A-TTAAATTATCAACAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAAT---CTCAGACAACTCATGCTATAACTACTAATTACAAACAATA-AACATAAAGATA-TTATGTTTTCCTACAGAAAATATCATCATAACGAATGTTTATATACGAATTGAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCATTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACC-TGAATAAATATTGATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTTACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAACTCTTCCTCGGAACTATCGTCTCCGTGTATTATGTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGAatgtactgaagtttaatctta
gi|4 : gtTAAATTT-AAAGACATGAGTGTTACATACTAGTATTCTCCGAGTTACCGCGAACTTTTTATATGGACATATAATGTGAACATCACATTTTATTTTATTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATtttgttcacatttaattaattccttatatataaataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatttaaagacatgagtgttacatactagtattctccgagttaccgcgaactttttatatggacatataatgtgaacatcacattttattttattggttgcatacatttcgctttagtaacgctatttaatgttat
gi|5 : gtattgatagagcactgcataaacaacaggaattttcatttcaactgacatgtgctgaagtttttactctttatttgaatataacacatattgattgaacagtatcgtattttgaaagatgataacaaatttaccttatgaatgaactactatacaatacacattattgctatttatttattttttattaaattatcaacaaatctattagatgtagttgaacgttttatatgtatatgcaaatctcagacaactcatgctataactactaattacaaacaataaacataaagatattatgttttcctacagaaaatatcatcataacgaatgtttatatacgaattgagcgattggtggtaatgtcaggcggattatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcttcactctcgaaatcgtcttcttctttcagttgtctggctgtccgtttgatagcattatgaatggtatcttttcttatcgaatcgaaccataaaacctgaataaatattgatcgataagaagctttctgtatttcggcaatagttcgttgaatgccttttttcttgcttgcttttcattcagttcatcgtcgtttacaaaatctgatgctattttgtcgaattcgggctgaagcgattttaatgcataatcaaccatgtcgtaccaagggtctattgtttcttccttttcatccgagtctgattccatatctgaatcgtcggtattagattcgtcggtaagttcttctttctccaactcttcctcggaactatcgtctccgtgtattatgttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggcgaacatcctcggcgacagcaaactactgaatgatttgttcacatttaattaattccttatatataaataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAG-TTTTTTACTCTTTATTTGAATGTAACACATATTGA------TTGAACAGTATCGT-------------------GTTTTGAAAGCT--------------GATAACAAATTTACCTTATGGATGAACTATTATACAATACACATTATTGCTATTTTATTTTATTTTTTTT-TTTTTAATTTAATTATTATCAAATCTATTGGATGTAATTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TGATGTTTTCCTACAGAAAATATCGTCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGGGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGGTAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAACACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAAGCTGATGCTATTTTGACGAATTCGTGCTGAAGCGATTTAAATGCATAGTCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCTATATTTGAATCGTCGGTATTAGATTCGTCAGTAAGTTCTTCTTTCTGCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCAAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTAATGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTAAAAGACATGAGTGTTATATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGACA
gi|6 : AATTTGAAAGAAATGAGTGTTACATACTAGTATACTCCCAGTTACCGCAAACGTTTTATAAGGGCATACAATGTGCACATCATATTTTATTTTATTGGTTGCATAC-ATTTCGCTTTAGTAACGCTTTTTAATGTTATCAAA
gi|7 : ATAC-CTTTCGCTTTAGTAACGCTATTTAATGTTATCAAAtaagtttaaaataatgtgttatgttttgtaactcttcaaccactttttgttggctccttgtttttaaagtctatgcattagaagtgtagagtaaactcatttaaatgaggagttaaaactaaatcctcaaagttgacagattacctataacatactggtcgaaatatcatcagtgcgcttatatttctttatcaaataccagcatctgttgtcttgtacacatgtttgccttaagcaaactgatctatacgatactttaagtatatacaaattggaatatgtatacccattatttatgtaggctataagtttagccacaaaatttacttcgacgattactcttaaagttaatttggtcatatattccaaacttcatctaattattattgttacgccgttaaaataatttaactgcaattaagcttcattcaaataagacaatcatttaatagcttttaaga
gi|8 : CAAGGGTCTGTTGTTTCTTCCTTTTCTTCCGAGTCTGATTCCATATCTGAATCGTCGGTATGAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGCCGAACATCCTCGGCGACAGCTAACTACTGAATGAtaagtttaaaataatgtgttatgttttgtaaatcttcaaccactttttgttgactccttgtttctaaagtctatgcattagaagtgtagagttaactcatttaaatgaggagttaaaactaaatcctcaatgttgacagattacctataacagactggtcgaaatatcatcgtgcgcttatatttctttatcaaatacccccatctgttgttttatacatatatttaccttaagcaaactgatctatacgatactttcagtatatacaaagggtatatgtatacccattatttatgtaggctataagtttagccacaaaatttacttcgacgattactctttaagttaatttcgtcatatattcccaacttcatctatttattattgtaacaccgttaaaagagtttaactgtaattaagcttcattcagttaaggcaattatttataagcatttcaaaatcatttacacaggcttt
gi|8 : TAAATTTAAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGACATCTAATGTGAACATCACATTTTATTTTGTTGGTTGCATAC-ATATCGATTTAGTAACGCTATTTAATGTTATCAtttgttcacttttaattataatataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatttaaaagacatgagtgttacatactagtatactccgagttaccgcgaactttttatatggacatctaatgtgaacatcacattttattttgttggttgcatacatatcgatttagtaacgctatttaatgttatca
gi|9 : caagggtctgttgtttcttccttttcttccgagtctgattccatatctgaatcgtcggtatgagattcgtcggtaagttcttctttctccagctcttcctcggaactatcgtctccgtgtattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacagccgaacatcctcggcgacagctaactactgaatgatttgttcacttttaattataatataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGGAGCTTTTTGTATTTCGGCAATAGTTCGTTGAATGCCTTTCTTCTTGCTTGCTTTTCATTCAGTCCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGCATAAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCTGAACTATCGTCTCCGTGTGTTATTTTCTTGTGCCGAAGCATATTATCTTTTCGTTTATACTCCTTTTTACATAGATCGCAGGCGAACAACCTCGGCGACAGCAAACTACTGAATGA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): CTATTTAATGTTATCAAATAAATTTAAAATAATGTGTAATGTTTTTTAAATCTTCAAGCTCTTTTTGCTAACTCCTTGTTTCTAAAGTCAATGCATTAAAAGTGTACAGTTAAATCATTTAAATGAGCAGTTAAA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22222222 22 1 1 33 11 1 9999999999999999 33333 1 111 3333333 777777777777777777777777777777777777777 1 44444444444444 1 2222222 1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 1 1 1 1 1 1 0 77777777 7 00 0 0 33 3 2 1 1 33 2 0 9 1 3333333333333333 33333 0 666 6 3 9999999 111111111111111111111111111111111111111 6 0 0 77777777777777 0 6666666 8 5 8 0 0 8 8 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 1 0 5
lowQualScore : . . . . . . . ........ . .. . . .. . . . . .. . . . . ................ ..... . ... . . ....... ....................................... . . . .............. . ....... . . . . . . . ............................................................................................................................... . . .
lowQualScore : 0 0 0 0 0 0 7 77777777 3 77 0 0 88 2 0 0 0 88 5 0 2 0 0000000000000000 33333 0 777 7 7 7777777 333333333333333333333333333333333333333 0 8 8 00000000000000 6 8888888 0 6 0 8 6 0 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 4 6 0
consensus : AGANAACTGAGATAGGGNGAAAGGAGTGAAACAGTTATAGTTGGATAANTTCNTTCTACAATAANTGGTNGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-TTTTATCTATTTA-TTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGGCAACACTATAATATTGTTACGCAAANCTAANT--ACCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGGA--------------A-GTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGA-G-AAAAGTCAACTGAGCGAATNNNNNNNAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT---TTATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
Reference ( family-4921 ) : AGANAACTGAGATAGGGNGAAAGGAGTGAAACAGTTATAGTTGGATAANTTCNTTCTACAATAANTGGTNGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-TTTTATCTATTTA-TTTTTTT-AA-ATAATACTGCT--GTTTAATAACGATATGAACCCACCGTGTGATGGCAACACTATAATATTGTTACGCAAANCTAANT--ACCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGGA--------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGA-G-AAAAGTCAACTGAGCGAATNNNNNNAAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTT-ACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT---TTATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
gi|1 : AGACAACTGAGATAGGGAGAAAGGAGTGAAATAGTTATAGTTGGATAAATTCATTCTACAATAACTGGTGGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-----ATCTATTTAGTTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGACAACACTATTATATTATTACACAAAGCTAAAT--ACCATTTCAT-TCCAACTTGATGTTATATTCCTTTAATTGATGCGCTACTCTGGTCCACGGA--------------A-GTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCCTGTTACTTTGATATAC-TGTATACTTATTTTCTTACTATAGGAGTATTAAAAGAGAAAGA-GGAAAAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGGGATTGATAGAGCACTGCATAAACAACAGGACTTTTCATTTCAACTAACATGTACTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTG-------------GTG------AAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT---TTATTTGTTTTTA-TTAAATTATTATCAAATCTATTGGATGTAATGGAACGTTTTATATGTATATGCAAATAATTTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCTATTGTTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTGCTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCT-AATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAAGTTGATGCTATTTTGACGAATTCGGGTTGAAGCGATTTAAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCTATATCTGAATCGTCGGTATTAGATTTGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGCATTATTTTCTTGTGCCAAAGC-----ATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAATATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTTTAAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACTGCGAACTTTTTATATGAGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
gi|10 : AATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACAGCAAACGTTTTATAAGGGCATAGAATGTGCACATAACATTTTATTTTGTTGGTTGCATAA-ATTTCGCATTAGTAACGCTATTTAATGTTATCAAA
gi|11 : GTAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCATTTTT-TTTT---TA---A---------AA-AAAATACTGCTT-GTTTAATATCGATATGAACCCACCGCGTGATGGTAACAGTATAATATTGTTACACAAAGCTAACT--ATAATTTCAT-TCAAACTTGATGTTATATTTCTTTAATTGCTGCGCTATTTTGGTCCACGGAGAGTCTAGCGTAACAAGTTTTGTTAAAGGTGGGTTTATAAGTAATGTATGGTATTGTTATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATtaagtttaaaataatatgttatgttttgtaactcttcaaccactttttgttggctccttgtttctaaagtctatgcataagaagtgtagagttaattcatttaaataaggagttaaaactaaatcctcaatgttgacagattacctataacatactggtcgaaatatcatcagtgcgcttatatttctttatcaaataccccccatctgttgtc
gi|12 : TGAAAGACATGGGTGTTACATACTAGTATACTCCGAGTTACCGCGAACGTTTTATATGGGTATCGAATGTGCACATCACATTTTATTTTATTGGTTGTATAC-ATTTCGCTTTAGTAACGCTGTTTAATGTTATCAAA
gi|14 : TTT-AACATAATACCGATAAGTTTTATAACGATTTGATTCCACCATGCGATTGCAACACTATAATATTG-CATGCAACTTTAAGCAAACCATTT-ATATC-AACTTCATATTAtaagtttaaaataatgtgttacgttttgatactcttcaaccactttttgttgactccttgtttctgaagtctatgcat
gi|15 : AACTTAAAAGACATGAGTGTTATATACTAGTATACTCCGAGTTA------ACTTTTTATATGGACATAGAATGTGCACATCACATTTTATTTTGTT
gi|16 : GAAAGACATGAGTGTTACATATTAGTATACTCCGAGTTACCGCGAACGTTTTA
gi|2 : AGAAAACTGAGATAGGGCGAAAGGAGTGAAACAGTTATAGTTGGATAATTTCTTTCTACAATAAGTGGTTATAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCGTTTTTATTTTATTTATTTA-TTTTTTTTAA-ATAATACTGCT--GTTTAATAACGATATGAACCCACCGTGTGATGACAAGACTATAATATTGTTACACAAACCTAACT--ATCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTAGTCTGGTCCACGGA--------------A-GTTT-----AAGATGTGTTTATAAGTAATGTATGGCATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTGTTTTCTTACTATAGAAGCATTGAAAGAGAAAGA-G-GAAA----------------------AGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------NNNNNNNTTGATAGAACACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTT-ACTCTTTATTTGAATATGACACATATTGATTGAACAGTATCATGTTTTGAAAGCT--------------AATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTTTACTTT---TT---------TA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAAGA-AACATAAAAAAAATTATGTTTTTCTACAGAAAATATCATCATAACAAATGTTTATGTACGAATTCAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAACACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTTGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTATTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATTTGATGCTATTTTGTCGAATTCGAGCTGAAGCGATTTTAATGCATAATCAACCATGTC------------TATTGTTTCTTCCTTATTATCTGAGTCTGATTCCATATTTGAAACGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTAGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCCGATAGCCTCGACGACAGCAAACTACTGAATGA
gi|3 : TATACCTATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGACG-AAAAGTCAACTAAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGTATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTAT-ACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCTAATACAATTAAATGGATAACAAATTTACCTTATGAATGAACTATAATACAATACACATTATTGCTATTT-----------ATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAAAGTTTTATATGTATATGCAAATAATATCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATTTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCCATTGGAAGTAATGTCAGGCGGATTTATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCATCTCTCTCGAAATCGTCTTTTTCTTTCAGTCGCCTGGCAGTCCGTTTGATAGTAGTATGAATGGTATATTTTCTCATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTATCTGTATTTCGGCAAAAGTTCGTTCAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGTTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAACGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCTTATCTGAATAGTCTTTATTAGTTTCGTCGGTAAGTTCGTCTTTCTTCAGCTTTTCCTCGGAACTATCGTCTCTGCGAATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGAtttgttcacttttattaattccttatatatatataaagtattggtatta
gi|3 : TATATTTGAAAGACATGAGTGTTACATACTAGTAAACTCTGAGTTACCGCAAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTA-TTTGTTGGTTGCATACTATTtttgttcacttttaattcatatatatatataaagtattggcataaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatatttgaaagacatgagtgttacatactagtaaactctgagttaccgcaaactttttatatgggcatagaatgtgcacatcacattttatttgttggttgcatactattatgtactgaagtttaatctta
gi|4 : tatacctatatacttattttcttactatagaagtattaaaagagaaagacgaaaagtcaactaagcgaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccggggattgatagagcactgtataaacaacaggaattttcatttcaactaacatgtgctgaagtttatactctttatttgaatataacacatattgattgaacagtatcgtgttttgaaagctaatacaattaaatggataacaaatttaccttatgaatgaactataatacaatacacattattgctatttattttttttattaaattatcatcaaatctattagatgtagttgaaagttttatatgtatatgcaaataatatcagacaactcatgctataactactaattacaaacaacataacataaaaatattattttttcctacagaaaatatcatcataacaaatgtttatatccgaatttagccattggaagtaatgtcaggcggatttatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcatctctctcgaaatcgtctttttctttcagtcgcctggcagtccgtttgatagtagtatgaatggtatattttctcatcgaatcgaaccataaaaccctgaataaatatttatcgataagaagctatctgtatttcggcaaaagttcgttcaatgccttttttcttgcttgcttttcattcagttcatcgtcgttcacaaaatctgatgttattttgtcgaattcgggctgaagcgattttaatgcataatcaaccatgtcgtaccaacggtctattgtttcttccttttcatccgagtctgattccttatctgaatagtctttattagtttcgtcggtaagttcgtctttcttcagcttttcctcggaactatcgtctctgcgaattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggcgaacatcctcggcgacagcaaactactgaatgatttgttcacttttaattcatatatatatataaagtattggcataaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTGACATGTGCTGAAGTTTTT-ACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTATTTTGAAAGAT--------------GATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTT-ATTT------ATTT-TTT--A-TTAAATTATCAACAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAAT---CTCAGACAACTCATGCTATAACTACTAATTACAAACAATA-AACATAAAGATA-TTATGTTTTCCTACAGAAAATATCATCATAACGAATGTTTATATACGAATTGAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCATTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACC-TGAATAAATATTGATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTTACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAACTCTTCCTCGGAACTATCGTCTCCGTGTATTATGTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGAatgtactgaagtttaatctta
gi|4 : gtTAAATTT-AAAGACATGAGTGTTACATACTAGTATTCTCCGAGTTACCGCGAACTTTTTATATGGACATATAATGTGAACATCACATTTTATTTTATTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATtttgttcacatttaattaattccttatatataaataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatttaaagacatgagtgttacatactagtattctccgagttaccgcgaactttttatatggacatataatgtgaacatcacattttattttattggttgcatacatttcgctttagtaacgctatttaatgttat
gi|5 : gtattgatagagcactgcataaacaacaggaattttcatttcaactgacatgtgctgaagtttttactctttatttgaatataacacatattgattgaacagtatcgtattttgaaagatgataacaaatttaccttatgaatgaactactatacaatacacattattgctatttatttattttttattaaattatcaacaaatctattagatgtagttgaacgttttatatgtatatgcaaatctcagacaactcatgctataactactaattacaaacaataaacataaagatattatgttttcctacagaaaatatcatcataacgaatgtttatatacgaattgagcgattggtggtaatgtcaggcggattatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcttcactctcgaaatcgtcttcttctttcagttgtctggctgtccgtttgatagcattatgaatggtatcttttcttatcgaatcgaaccataaaacctgaataaatattgatcgataagaagctttctgtatttcggcaatagttcgttgaatgccttttttcttgcttgcttttcattcagttcatcgtcgtttacaaaatctgatgctattttgtcgaattcgggctgaagcgattttaatgcataatcaaccatgtcgtaccaagggtctattgtttcttccttttcatccgagtctgattccatatctgaatcgtcggtattagattcgtcggtaagttcttctttctccaactcttcctcggaactatcgtctccgtgtattatgttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggcgaacatcctcggcgacagcaaactactgaatgatttgttcacatttaattaattccttatatataaataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAGTTTTTTACTCTTTATTTGAATGTAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGGATGAACTATTATACAATACACATTATTGCTATTTTATTTTATTTTTTTT-TTTTTAATTTAATTATTATCAAATCTATTGGATGTAATTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TGATGTTTTCCTACAGAAAATATCGTCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGGGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGGTAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAACACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAAGCTGATGCTATTTTGACGAATTCGTGCTGAAGCGATTTAAATGCATAGTCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCTATATTTGAATCGTCGGTATTAGATTCGTCAGTAAGTTCTTCTTTCTGCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCAAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTAATGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTAAAAGACATGAGTGTTATATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGACA
gi|6 : AATTTGAAAGAAATGAGTGTTACATACTAGTATACTCCCAGTTACCGCAAACGTTTTATAAGGGCATACAATGTGCACATCATATTTTATTTTATTGGTTGCATAC-ATTTCGCTTTAGTAACGCTTTTTAATGTTATCAAA
gi|7 : ATAC-CTTTCGCTTTAGTAACGCTATTTAATGTTATCAAAtaagtttaaaataatgtgttatgttttgtaactcttcaaccactttttgttggctccttgtttttaaagtctatgcattagaagtgtagagtaaactcatttaaatgaggagttaaaactaaatcctcaaagttgacagattacctataacatactggtcgaaatatcatcagtgcgcttatatttctttatcaaataccagcatctgttgtcttgtacacatgtttgccttaagcaaactgatctatacgatactttaagtatatacaaattggaatatgtatacccattatttatgtaggctataagtttagccacaaaatttacttcgacgattactcttaaagttaatttggtcatatattccaaacttcatctaattattattgttacgccgttaaaataatttaactgcaattaagcttcattcaaataagacaatcatttaatagcttttaaga
gi|8 : CAAGGGTCTGTTGTTTCTTCCTTTTCTTCCGAGTCTGATTCCATATCTGAATCGTCGGTATGAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGCCGAACATCCTCGGCGACAGCTAACTACTGAATGAtaagtttaaaataatgtgttatgttttgtaaatcttcaaccactttttgttgactccttgtttctaaagtctatgcattagaagtgtagagttaactcatttaaatgaggagttaaaactaaatcctcaatgttgacagattacctataacagactggtcgaaatatcatcgtgcgcttatatttctttatcaaatacccccatctgttgttttatacatatatttaccttaagcaaactgatctatacgatactttcagtatatacaaagggtatatgtatacccattatttatgtaggctataagtttagccacaaaatttacttcgacgattactctttaagttaatttcgtcatatattcccaacttcatctatttattattgtaacaccgttaaaagagtttaactgtaattaagcttcattcagttaaggcaattatttataagcatttcaaaatcatttacacaggcttt
gi|8 : TAAATTTAAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGACATCTAATGTGAACATCACATTTTATTTTGTTGGTTGCATAC-ATATCGATTTAGTAACGCTATTTAATGTTATCAtttgttcacttttaattataatataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatttaaaagacatgagtgttacatactagtatactccgagttaccgcgaactttttatatggacatctaatgtgaacatcacattttattttgttggttgcatacatatcgatttagtaacgctatttaatgttatca
gi|9 : caagggtctgttgtttcttccttttcttccgagtctgattccatatctgaatcgtcggtatgagattcgtcggtaagttcttctttctccagctcttcctcggaactatcgtctccgtgtattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacagccgaacatcctcggcgacagctaactactgaatgatttgttcacttttaattataatataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGGAGCTTTTTGTATTTCGGCAATAGTTCGTTGAATGCCTTTCTTCTTGCTTGCTTTTCATTCAGTCCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGCATAAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCTGAACTATCGTCTCCGTGTGTTATTTTCTTGTGCCGAAGCATATTATCTTTTCGTTTATACTCCTTTTTACATAGATCGCAGGCGAACAACCTCGGCGACAGCAAACTACTGAATGA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): CTATTTAATGTTATCAAATAAATTTAAAATAATGTGTAATGTTTTTTAAATCTTCAAGCTCTTTTTGCTAACTCCTTGTTTCTAAAGTCAATGCATTAAAAGTGTACAGTTAAATCATTTAAATGAGCAGTTAAA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22222222 22 1 1 11 11 1 888888888888888 33333 1 111 3333333 777777777777777777777777777777777777777 2 44444444444444 1 2222222 1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 1 1 1 1 1 1 0 77777777 7 00 0 0 99 3 2 1 1 33 2 0 9 1 333333333333333 33333 0 666 6 3 9999999 111111111111111111111111111111111111111 0 0 0 77777777777777 0 6666666 8 5 8 0 0 8 8 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 1 0 5
lowQualScore : . . . . . . . ........ . .. . . .. . . . . .. . . . . ............... ..... . ... . . ....... ....................................... . . . .............. . ....... . . . . . . . ............................................................................................................................... . . .
lowQualScore : 0 0 0 0 0 0 7 77777777 3 77 0 0 88 2 0 0 0 88 5 0 2 0 333333333333333 33333 0 777 7 7 7777777 333333333333333333333333333333333333333 4 8 8 00000000000000 6 8888888 0 6 0 8 6 0 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 4 6 0
consensus : AGANAACTGAGATAGGGNGAAAGGAGTGAAACAGTTATAGTTGGATAANTTCNTTCTACAATAANTGGTNGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-TTTTATCTATTTA-TTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGGCAACACTATAATATTGTTACGCAAANCTAANT--ACCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGA-G-AAAAGTCAACTGAGCGAATNNNNNNNAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT---TTATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
Reference ( family-4921 ) : AGANAACTGAGATAGGGNGAAAGGAGTGAAACAGTTATAGTTGGATAANTTCNTTCTACAATAANTGGTNGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-TTTTATCTATTTA-TTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGGCAACACTATAATATTGTTACGCAAANCTAANT--ACCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGA-G-AAAAGTCAACTGAGCGAATNNNNNNNAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT---TTATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
gi|1 : AGACAACTGAGATAGGGAGAAAGGAGTGAAATAGTTATAGTTGGATAAATTCATTCTACAATAACTGGTGGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-----ATCTATTTAGTTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGACAACACTATTATATTATTACACAAAGCTAAAT--ACCATTTCAT-TCCAACTTGATGTTATATTCCTTTAATTGATGCGCTACTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCCTGTTACTTTGATATAC-TGTATACTTATTTTCTTACTATAGGAGTATTAAAAGAGAAAGA-GGAAAAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGGGATTGATAGAGCACTGCATAAACAACAGGACTTTTCATTTCAACTAACATGTACTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTG-------------GTG------AAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT---TTATTTGTTTTTA-TTAAATTATTATCAAATCTATTGGATGTAATGGAACGTTTTATATGTATATGCAAATAATTTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCTATTGTTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTGCTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCT-AATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAAGTTGATGCTATTTTGACGAATTCGGGTTGAAGCGATTTAAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCTATATCTGAATCGTCGGTATTAGATTTGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGCATTATTTTCTTGTGCCAAAGC-----ATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAATATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTTTAAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACTGCGAACTTTTTATATGAGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
gi|10 : AATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACAGCAAACGTTTTATAAGGGCATAGAATGTGCACATAACATTTTATTTTGTTGGTTGCATAA-ATTTCGCATTAGTAACGCTATTTAATGTTATCAAA
gi|11 : GTAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCATTTTT-TTTT---TA---A---------AA-AAAATACTGCTT-GTTTAATATCGATATGAACCCACCGCGTGATGGTAACAGTATAATATTGTTACACAAAGCTAACT--ATAATTTCAT-TCAAACTTGATGTTATATTTCTTTAATTGCTGCGCTATTTTGGTCCACGGAGAGTCTAGCGTAACAAGTTTTGTTAAAGGTGGGTTTATAAGTAATGTATGGTATTGTTATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATtaagtttaaaataatatgttatgttttgtaactcttcaaccactttttgttggctccttgtttctaaagtctatgcataagaagtgtagagttaattcatttaaataaggagttaaaactaaatcctcaatgttgacagattacctataacatactggtcgaaatatcatcagtgcgcttatatttctttatcaaataccccccatctgttgtc
gi|12 : TGAAAGACATGGGTGTTACATACTAGTATACTCCGAGTTACCGCGAACGTTTTATATGGGTATCGAATGTGCACATCACATTTTATTTTATTGGTTGTATAC-ATTTCGCTTTAGTAACGCTGTTTAATGTTATCAAA
gi|14 : TTT-AACATAATACCGATAAGTTTTATAACGATTTGATTCCACCATGCGATTGCAACACTATAATATTG-CATGCAACTTTAAGCAAACCATTT-ATATC-AACTTCATATTAtaagtttaaaataatgtgttacgttttgatactcttcaaccactttttgttgactccttgtttctgaagtctatgcat
gi|15 : AACTTAAAAGACATGAGTGTTATATACTAGTATACTCCGAGTTA------ACTTTTTATATGGACATAGAATGTGCACATCACATTTTATTTTGTT
gi|16 : GAAAGACATGAGTGTTACATATTAGTATACTCCGAGTTACCGCGAACGTTTTA
gi|2 : AGAAAACTGAGATAGGGCGAAAGGAGTGAAACAGTTATAGTTGGATAATTTCTTTCTACAATAAGTGGTTATAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCGTTTTTATTTTATTTATTTA-TTTTTTTTAA-ATAATACTGCT--GTTTAATAACGATATGAACCCACCGTGTGATGACAAGACTATAATATTGTTACACAAACCTAACT--ATCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTAGTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGCATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTGTTTTCTTACTATAGAAGCATTGAAAGAGAAAGA-G-GAAA----------------------AGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------NNNNNNNTTGATAGAACACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTT-ACTCTTTATTTGAATATGACACATATTGATTGAACAGTATCATGTTTTGAAAGCT--------------AATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTTTACTTT---TT---------TA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAAGA-AACATAAAAAAAATTATGTTTTTCTACAGAAAATATCATCATAACAAATGTTTATGTACGAATTCAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAACACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTTGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTATTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATTTGATGCTATTTTGTCGAATTCGAGCTGAAGCGATTTTAATGCATAATCAACCATGTC------------TATTGTTTCTTCCTTATTATCTGAGTCTGATTCCATATTTGAAACGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTAGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCCGATAGCCTCGACGACAGCAAACTACTGAATGA
gi|3 : TATACCTATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGACG-AAAAGTCAACTAAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGTATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTAT-ACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCTAATACAATTAAATGGATAACAAATTTACCTTATGAATGAACTATAATACAATACACATTATTGCTATTT-----------ATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAAAGTTTTATATGTATATGCAAATAATATCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATTTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCCATTGGAAGTAATGTCAGGCGGATTTATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCATCTCTCTCGAAATCGTCTTTTTCTTTCAGTCGCCTGGCAGTCCGTTTGATAGTAGTATGAATGGTATATTTTCTCATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTATCTGTATTTCGGCAAAAGTTCGTTCAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGTTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAACGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCTTATCTGAATAGTCTTTATTAGTTTCGTCGGTAAGTTCGTCTTTCTTCAGCTTTTCCTCGGAACTATCGTCTCTGCGAATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGAtttgttcacttttattaattccttatatatatataaagtattggtatta
gi|3 : TATATTTGAAAGACATGAGTGTTACATACTAGTAAACTCTGAGTTACCGCAAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTA-TTTGTTGGTTGCATACTATTtttgttcacttttaattcatatatatatataaagtattggcataaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatatttgaaagacatgagtgttacatactagtaaactctgagttaccgcaaactttttatatgggcatagaatgtgcacatcacattttatttgttggttgcatactattatgtactgaagtttaatctta
gi|4 : tatacctatatacttattttcttactatagaagtattaaaagagaaagacgaaaagtcaactaagcgaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccggggattgatagagcactgtataaacaacaggaattttcatttcaactaacatgtgctgaagtttatactctttatttgaatataacacatattgattgaacagtatcgtgttttgaaagctaatacaattaaatggataacaaatttaccttatgaatgaactataatacaatacacattattgctatttattttttttattaaattatcatcaaatctattagatgtagttgaaagttttatatgtatatgcaaataatatcagacaactcatgctataactactaattacaaacaacataacataaaaatattattttttcctacagaaaatatcatcataacaaatgtttatatccgaatttagccattggaagtaatgtcaggcggatttatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcatctctctcgaaatcgtctttttctttcagtcgcctggcagtccgtttgatagtagtatgaatggtatattttctcatcgaatcgaaccataaaaccctgaataaatatttatcgataagaagctatctgtatttcggcaaaagttcgttcaatgccttttttcttgcttgcttttcattcagttcatcgtcgttcacaaaatctgatgttattttgtcgaattcgggctgaagcgattttaatgcataatcaaccatgtcgtaccaacggtctattgtttcttccttttcatccgagtctgattccttatctgaatagtctttattagtttcgtcggtaagttcgtctttcttcagcttttcctcggaactatcgtctctgcgaattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggcgaacatcctcggcgacagcaaactactgaatgatttgttcacttttaattcatatatatatataaagtattggcataaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTGACATGTGCTGAAGTTTTT-ACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTATTTTGAAAGAT--------------GATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTT-ATTT------ATTT-TTT--A-TTAAATTATCAACAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAAT---CTCAGACAACTCATGCTATAACTACTAATTACAAACAATA-AACATAAAGATA-TTATGTTTTCCTACAGAAAATATCATCATAACGAATGTTTATATACGAATTGAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCATTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACC-TGAATAAATATTGATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTTACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAACTCTTCCTCGGAACTATCGTCTCCGTGTATTATGTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGAatgtactgaagtttaatctta
gi|4 : gtTAAATTT-AAAGACATGAGTGTTACATACTAGTATTCTCCGAGTTACCGCGAACTTTTTATATGGACATATAATGTGAACATCACATTTTATTTTATTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATtttgttcacatttaattaattccttatatataaataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatttaaagacatgagtgttacatactagtattctccgagttaccgcgaactttttatatggacatataatgtgaacatcacattttattttattggttgcatacatttcgctttagtaacgctatttaatgttat
gi|5 : gtattgatagagcactgcataaacaacaggaattttcatttcaactgacatgtgctgaagtttttactctttatttgaatataacacatattgattgaacagtatcgtattttgaaagatgataacaaatttaccttatgaatgaactactatacaatacacattattgctatttatttattttttattaaattatcaacaaatctattagatgtagttgaacgttttatatgtatatgcaaatctcagacaactcatgctataactactaattacaaacaataaacataaagatattatgttttcctacagaaaatatcatcataacgaatgtttatatacgaattgagcgattggtggtaatgtcaggcggattatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcttcactctcgaaatcgtcttcttctttcagttgtctggctgtccgtttgatagcattatgaatggtatcttttcttatcgaatcgaaccataaaacctgaataaatattgatcgataagaagctttctgtatttcggcaatagttcgttgaatgccttttttcttgcttgcttttcattcagttcatcgtcgtttacaaaatctgatgctattttgtcgaattcgggctgaagcgattttaatgcataatcaaccatgtcgtaccaagggtctattgtttcttccttttcatccgagtctgattccatatctgaatcgtcggtattagattcgtcggtaagttcttctttctccaactcttcctcggaactatcgtctccgtgtattatgttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggcgaacatcctcggcgacagcaaactactgaatgatttgttcacatttaattaattccttatatataaataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAGTTTTTTACTCTTTATTTGAATGTAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGGATGAACTATTATACAATACACATTATTGCTATTTTATTTTATTTTTTTT-TTTTTAATTTAATTATTATCAAATCTATTGGATGTAATTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TGATGTTTTCCTACAGAAAATATCGTCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGGGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGGTAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAACACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAAGCTGATGCTATTTTGACGAATTCGTGCTGAAGCGATTTAAATGCATAGTCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCTATATTTGAATCGTCGGTATTAGATTCGTCAGTAAGTTCTTCTTTCTGCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCAAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTAATGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTAAAAGACATGAGTGTTATATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGACA
gi|6 : AATTTGAAAGAAATGAGTGTTACATACTAGTATACTCCCAGTTACCGCAAACGTTTTATAAGGGCATACAATGTGCACATCATATTTTATTTTATTGGTTGCATAC-ATTTCGCTTTAGTAACGCTTTTTAATGTTATCAAA
gi|7 : ATAC-CTTTCGCTTTAGTAACGCTATTTAATGTTATCAAAtaagtttaaaataatgtgttatgttttgtaactcttcaaccactttttgttggctccttgtttttaaagtctatgcattagaagtgtagagtaaactcatttaaatgaggagttaaaactaaatcctcaaagttgacagattacctataacatactggtcgaaatatcatcagtgcgcttatatttctttatcaaataccagcatctgttgtcttgtacacatgtttgccttaagcaaactgatctatacgatactttaagtatatacaaattggaatatgtatacccattatttatgtaggctataagtttagccacaaaatttacttcgacgattactcttaaagttaatttggtcatatattccaaacttcatctaattattattgttacgccgttaaaataatttaactgcaattaagcttcattcaaataagacaatcatttaatagcttttaaga
gi|8 : CAAGGGTCTGTTGTTTCTTCCTTTTCTTCCGAGTCTGATTCCATATCTGAATCGTCGGTATGAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGCCGAACATCCTCGGCGACAGCTAACTACTGAATGAtaagtttaaaataatgtgttatgttttgtaaatcttcaaccactttttgttgactccttgtttctaaagtctatgcattagaagtgtagagttaactcatttaaatgaggagttaaaactaaatcctcaatgttgacagattacctataacagactggtcgaaatatcatcgtgcgcttatatttctttatcaaatacccccatctgttgttttatacatatatttaccttaagcaaactgatctatacgatactttcagtatatacaaagggtatatgtatacccattatttatgtaggctataagtttagccacaaaatttacttcgacgattactctttaagttaatttcgtcatatattcccaacttcatctatttattattgtaacaccgttaaaagagtttaactgtaattaagcttcattcagttaaggcaattatttataagcatttcaaaatcatttacacaggcttt
gi|8 : TAAATTTAAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGACATCTAATGTGAACATCACATTTTATTTTGTTGGTTGCATAC-ATATCGATTTAGTAACGCTATTTAATGTTATCAtttgttcacttttaattataatataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatttaaaagacatgagtgttacatactagtatactccgagttaccgcgaactttttatatggacatctaatgtgaacatcacattttattttgttggttgcatacatatcgatttagtaacgctatttaatgttatca
gi|9 : caagggtctgttgtttcttccttttcttccgagtctgattccatatctgaatcgtcggtatgagattcgtcggtaagttcttctttctccagctcttcctcggaactatcgtctccgtgtattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacagccgaacatcctcggcgacagctaactactgaatgatttgttcacttttaattataatataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGGAGCTTTTTGTATTTCGGCAATAGTTCGTTGAATGCCTTTCTTCTTGCTTGCTTTTCATTCAGTCCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGCATAAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCTGAACTATCGTCTCCGTGTGTTATTTTCTTGTGCCGAAGCATATTATCTTTTCGTTTATACTCCTTTTTACATAGATCGCAGGCGAACAACCTCGGCGACAGCAAACTACTGAATGA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): CTATTTAATGTTATCAAATAAATTTAAAATAATGTGTAATGTTTTTTAAATCTTCAAGCTCTTTTTGCTAACTCCTTGTTTCTAAAGTCAATGCATTAAAAGTGTACAGTTAAATCATTTAAATGAGCAGTTAAA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22222222 22 1 1 11 11 1 888888888888888 33333 1 111 3333333 777777777777777777777777777777777777777 2 44444444444444 1 2222222 1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 1 1 1 1 1 1 0 77777777 7 00 0 0 99 3 2 1 1 33 2 0 9 1 333333333333333 33333 0 666 6 3 9999999 111111111111111111111111111111111111111 0 0 0 77777777777777 0 6666666 8 5 8 0 0 8 8 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 1 0 5
lowQualScore : . . . . . . . ........ . .. . . .. . . . . .. . . . . ............... ..... . ... . . ....... ....................................... . . . .............. . ....... . . . . . . . ............................................................................................................................... . . .
lowQualScore : 0 0 0 0 0 0 7 77777777 3 77 0 0 88 2 0 0 0 88 5 0 2 0 333333333333333 33333 0 777 7 7 7777777 333333333333333333333333333333333333333 4 8 8 00000000000000 6 8888888 0 6 0 8 6 0 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 4 6 0
consensus : AGANAACTGAGATAGGGNGAAAGGAGTGAAACAGTTATAGTTGGATAANTTCNTTCTACAATAANTGGTNGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-TTTTATCTATTTA-TTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGGCAACACTATAATATTGTTACGCAAANCTAANT--ACCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGA-G-AAAAGTCAACTGAGCGAATNNNNNNNAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT---TTATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
Reference ( family-4921 ) : AGANAACTGAGATAGGGNGAAAGGAGTGAAACAGTTATAGTTGGATAANTTCNTTCTACAATAANTGGTNGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-TTTTATCTATTTA-TTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGGCAACACTATAATATTGTTACGCAAANCTAANT--ACCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGA-G-AAAAGTCAACTGAGCGAATNNNNNNNAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT---TTATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
gi|1 : AGACAACTGAGATAGGGAGAAAGGAGTGAAATAGTTATAGTTGGATAAATTCATTCTACAATAACTGGTGGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-----ATCTATTTAGTTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGACAACACTATTATATTATTACACAAAGCTAAAT--ACCATTTCAT-TCCAACTTGATGTTATATTCCTTTAATTGATGCGCTACTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCCTGTTACTTTGATATAC-TGTATACTTATTTTCTTACTATAGGAGTATTAAAAGAGAAAGA-GGAAAAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGGGATTGATAGAGCACTGCATAAACAACAGGACTTTTCATTTCAACTAACATGTACTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTG-------------GTG------AAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT---TTATTTGTTTTTA-TTAAATTATTATCAAATCTATTGGATGTAATGGAACGTTTTATATGTATATGCAAATAATTTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCTATTGTTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTGCTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCT-AATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAAGTTGATGCTATTTTGACGAATTCGGGTTGAAGCGATTTAAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCTATATCTGAATCGTCGGTATTAGATTTGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGCATTATTTTCTTGTGCCAAAGC-----ATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAATATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTTTAAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACTGCGAACTTTTTATATGAGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
gi|10 : AATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACAGCAAACGTTTTATAAGGGCATAGAATGTGCACATAACATTTTATTTTGTTGGTTGCATAA-ATTTCGCATTAGTAACGCTATTTAATGTTATCAAA
gi|11 : GTAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCATTTTT-TTTT---TA---A---------AA-AAAATACTGCTT-GTTTAATATCGATATGAACCCACCGCGTGATGGTAACAGTATAATATTGTTACACAAAGCTAACT--ATAATTTCAT-TCAAACTTGATGTTATATTTCTTTAATTGCTGCGCTATTTTGGTCCACGGAGAGTCTAGCGTAACAAGTTTTGTTAAAGGTGGGTTTATAAGTAATGTATGGTATTGTTATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATtaagtttaaaataatatgttatgttttgtaactcttcaaccactttttgttggctccttgtttctaaagtctatgcataagaagtgtagagttaattcatttaaataaggagttaaaactaaatcctcaatgttgacagattacctataacatactggtcgaaatatcatcagtgcgcttatatttctttatcaaataccccccatctgttgtc
gi|12 : TGAAAGACATGGGTGTTACATACTAGTATACTCCGAGTTACCGCGAACGTTTTATATGGGTATCGAATGTGCACATCACATTTTATTTTATTGGTTGTATAC-ATTTCGCTTTAGTAACGCTGTTTAATGTTATCAAA
gi|14 : TTT-AACATAATACCGATAAGTTTTATAACGATTTGATTCCACCATGCGATTGCAACACTATAATATTG-CATGCAACTTTAAGCAAACCATTT-ATATC-AACTTCATATTAtaagtttaaaataatgtgttacgttttgatactcttcaaccactttttgttgactccttgtttctgaagtctatgcat
gi|15 : AACTTAAAAGACATGAGTGTTATATACTAGTATACTCCGAGTTA------ACTTTTTATATGGACATAGAATGTGCACATCACATTTTATTTTGTT
gi|16 : GAAAGACATGAGTGTTACATATTAGTATACTCCGAGTTACCGCGAACGTTTTA
gi|2 : AGAAAACTGAGATAGGGCGAAAGGAGTGAAACAGTTATAGTTGGATAATTTCTTTCTACAATAAGTGGTTATAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCGTTTTTATTTTATTTATTTA-TTTTTTTTAA-ATAATACTGCT--GTTTAATAACGATATGAACCCACCGTGTGATGACAAGACTATAATATTGTTACACAAACCTAACT--ATCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTAGTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGCATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTGTTTTCTTACTATAGAAGCATTGAAAGAGAAAGA-G-GAAA----------------------AGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------NNNNNNNTTGATAGAACACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTT-ACTCTTTATTTGAATATGACACATATTGATTGAACAGTATCATGTTTTGAAAGCT--------------AATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTTTACTTT---TT---------TA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAAGA-AACATAAAAAAAATTATGTTTTTCTACAGAAAATATCATCATAACAAATGTTTATGTACGAATTCAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAACACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTTGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTATTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATTTGATGCTATTTTGTCGAATTCGAGCTGAAGCGATTTTAATGCATAATCAACCATGTC------------TATTGTTTCTTCCTTATTATCTGAGTCTGATTCCATATTTGAAACGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTAGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCCGATAGCCTCGACGACAGCAAACTACTGAATGA
gi|3 : TATACCTATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGACG-AAAAGTCAACTAAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGTATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTAT-ACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCTAATACAATTAAATGGATAACAAATTTACCTTATGAATGAACTATAATACAATACACATTATTGCTATTT-----------ATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAAAGTTTTATATGTATATGCAAATAATATCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATTTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCCATTGGAAGTAATGTCAGGCGGATTTATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCATCTCTCTCGAAATCGTCTTTTTCTTTCAGTCGCCTGGCAGTCCGTTTGATAGTAGTATGAATGGTATATTTTCTCATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTATCTGTATTTCGGCAAAAGTTCGTTCAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGTTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAACGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCTTATCTGAATAGTCTTTATTAGTTTCGTCGGTAAGTTCGTCTTTCTTCAGCTTTTCCTCGGAACTATCGTCTCTGCGAATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGAtttgttcacttttattaattccttatatatatataaagtattggtatta
gi|3 : TATATTTGAAAGACATGAGTGTTACATACTAGTAAACTCTGAGTTACCGCAAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTA-TTTGTTGGTTGCATACTATTtttgttcacttttaattcatatatatatataaagtattggcataaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatatttgaaagacatgagtgttacatactagtaaactctgagttaccgcaaactttttatatgggcatagaatgtgcacatcacattttatttgttggttgcatactattatgtactgaagtttaatctta
gi|4 : tatacctatatacttattttcttactatagaagtattaaaagagaaagacgaaaagtcaactaagcgaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccggggattgatagagcactgtataaacaacaggaattttcatttcaactaacatgtgctgaagtttatactctttatttgaatataacacatattgattgaacagtatcgtgttttgaaagctaatacaattaaatggataacaaatttaccttatgaatgaactataatacaatacacattattgctatttattttttttattaaattatcatcaaatctattagatgtagttgaaagttttatatgtatatgcaaataatatcagacaactcatgctataactactaattacaaacaacataacataaaaatattattttttcctacagaaaatatcatcataacaaatgtttatatccgaatttagccattggaagtaatgtcaggcggatttatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcatctctctcgaaatcgtctttttctttcagtcgcctggcagtccgtttgatagtagtatgaatggtatattttctcatcgaatcgaaccataaaaccctgaataaatatttatcgataagaagctatctgtatttcggcaaaagttcgttcaatgccttttttcttgcttgcttttcattcagttcatcgtcgttcacaaaatctgatgttattttgtcgaattcgggctgaagcgattttaatgcataatcaaccatgtcgtaccaacggtctattgtttcttccttttcatccgagtctgattccttatctgaatagtctttattagtttcgtcggtaagttcgtctttcttcagcttttcctcggaactatcgtctctgcgaattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggcgaacatcctcggcgacagcaaactactgaatgatttgttcacttttaattcatatatatatataaagtattggcataaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTGACATGTGCTGAAGTTTTT-ACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTATTTTGAAAGAT--------------GATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTT-ATTT------ATTT-TTT--A-TTAAATTATCAACAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAAT---CTCAGACAACTCATGCTATAACTACTAATTACAAACAATA-AACATAAAGATA-TTATGTTTTCCTACAGAAAATATCATCATAACGAATGTTTATATACGAATTGAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCATTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACC-TGAATAAATATTGATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTTACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAACTCTTCCTCGGAACTATCGTCTCCGTGTATTATGTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGAatgtactgaagtttaatctta
gi|4 : gtTAAATTT-AAAGACATGAGTGTTACATACTAGTATTCTCCGAGTTACCGCGAACTTTTTATATGGACATATAATGTGAACATCACATTTTATTTTATTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATtttgttcacatttaattaattccttatatataaataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatttaaagacatgagtgttacatactagtattctccgagttaccgcgaactttttatatggacatataatgtgaacatcacattttattttattggttgcatacatttcgctttagtaacgctatttaatgttat
gi|5 : gtattgatagagcactgcataaacaacaggaattttcatttcaactgacatgtgctgaagtttttactctttatttgaatataacacatattgattgaacagtatcgtattttgaaagatgataacaaatttaccttatgaatgaactactatacaatacacattattgctatttatttattttttattaaattatcaacaaatctattagatgtagttgaacgttttatatgtatatgcaaatctcagacaactcatgctataactactaattacaaacaataaacataaagatattatgttttcctacagaaaatatcatcataacgaatgtttatatacgaattgagcgattggtggtaatgtcaggcggattatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcttcactctcgaaatcgtcttcttctttcagttgtctggctgtccgtttgatagcattatgaatggtatcttttcttatcgaatcgaaccataaaacctgaataaatattgatcgataagaagctttctgtatttcggcaatagttcgttgaatgccttttttcttgcttgcttttcattcagttcatcgtcgtttacaaaatctgatgctattttgtcgaattcgggctgaagcgattttaatgcataatcaaccatgtcgtaccaagggtctattgtttcttccttttcatccgagtctgattccatatctgaatcgtcggtattagattcgtcggtaagttcttctttctccaactcttcctcggaactatcgtctccgtgtattatgttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggcgaacatcctcggcgacagcaaactactgaatgatttgttcacatttaattaattccttatatataaataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAGTTTTTTACTCTTTATTTGAATGTAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGGATGAACTATTATACAATACACATTATTGCTATTTTATTTTATTTTTTTT-TTTTTAATTTAATTATTATCAAATCTATTGGATGTAATTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TGATGTTTTCCTACAGAAAATATCGTCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGGGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGGTAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAACACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAAGCTGATGCTATTTTGACGAATTCGTGCTGAAGCGATTTAAATGCATAGTCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCTATATTTGAATCGTCGGTATTAGATTCGTCAGTAAGTTCTTCTTTCTGCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCAAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTAATGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTAAAAGACATGAGTGTTATATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGACA
gi|6 : AATTTGAAAGAAATGAGTGTTACATACTAGTATACTCCCAGTTACCGCAAACGTTTTATAAGGGCATACAATGTGCACATCATATTTTATTTTATTGGTTGCATAC-ATTTCGCTTTAGTAACGCTTTTTAATGTTATCAAA
gi|7 : ATAC-CTTTCGCTTTAGTAACGCTATTTAATGTTATCAAAtaagtttaaaataatgtgttatgttttgtaactcttcaaccactttttgttggctccttgtttttaaagtctatgcattagaagtgtagagtaaactcatttaaatgaggagttaaaactaaatcctcaaagttgacagattacctataacatactggtcgaaatatcatcagtgcgcttatatttctttatcaaataccagcatctgttgtcttgtacacatgtttgccttaagcaaactgatctatacgatactttaagtatatacaaattggaatatgtatacccattatttatgtaggctataagtttagccacaaaatttacttcgacgattactcttaaagttaatttggtcatatattccaaacttcatctaattattattgttacgccgttaaaataatttaactgcaattaagcttcattcaaataagacaatcatttaatagcttttaaga
gi|8 : CAAGGGTCTGTTGTTTCTTCCTTTTCTTCCGAGTCTGATTCCATATCTGAATCGTCGGTATGAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGCCGAACATCCTCGGCGACAGCTAACTACTGAATGAtaagtttaaaataatgtgttatgttttgtaaatcttcaaccactttttgttgactccttgtttctaaagtctatgcattagaagtgtagagttaactcatttaaatgaggagttaaaactaaatcctcaatgttgacagattacctataacagactggtcgaaatatcatcgtgcgcttatatttctttatcaaatacccccatctgttgttttatacatatatttaccttaagcaaactgatctatacgatactttcagtatatacaaagggtatatgtatacccattatttatgtaggctataagtttagccacaaaatttacttcgacgattactctttaagttaatttcgtcatatattcccaacttcatctatttattattgtaacaccgttaaaagagtttaactgtaattaagcttcattcagttaaggcaattatttataagcatttcaaaatcatttacacaggcttt
gi|8 : TAAATTTAAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGACATCTAATGTGAACATCACATTTTATTTTGTTGGTTGCATAC-ATATCGATTTAGTAACGCTATTTAATGTTATCAtttgttcacttttaattataatataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatttaaaagacatgagtgttacatactagtatactccgagttaccgcgaactttttatatggacatctaatgtgaacatcacattttattttgttggttgcatacatatcgatttagtaacgctatttaatgttatca
gi|9 : caagggtctgttgtttcttccttttcttccgagtctgattccatatctgaatcgtcggtatgagattcgtcggtaagttcttctttctccagctcttcctcggaactatcgtctccgtgtattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacagccgaacatcctcggcgacagctaactactgaatgatttgttcacttttaattataatataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGGAGCTTTTTGTATTTCGGCAATAGTTCGTTGAATGCCTTTCTTCTTGCTTGCTTTTCATTCAGTCCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGCATAAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCTGAACTATCGTCTCCGTGTGTTATTTTCTTGTGCCGAAGCATATTATCTTTTCGTTTATACTCCTTTTTACATAGATCGCAGGCGAACAACCTCGGCGACAGCAAACTACTGAATGA
blockSeqs : A C T T G T ATTTTATT T T T C AA T A G C AA C A A T AGAGTCTAGCGTAAC TGTTA C CG G A NNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN T AATACAATTAAATG T TATTTTT . T A T A T NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN G T
blockSeqs : TTTT . . . . T T G T G . C . A G . . . G . . . NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN . . T TTT . T . T . . G .
blockSeqs : . . . . A C C . . . . . . . . A . . . . . . A .
blockSeqs : . . . A . . . . . . G .
blockSeqs : G .
blockSeqs : A .
blockSeqs : G .
blockSeqs : A
blockSeqs : .
blockSeqCons : TA*****
originalCons : AGANAACTGAGATAGGGNGAAAGGAGTGAAACAGTTATAGTTGGATAANTTCNTTCTACAATAANTGGTNGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-TTTTATCTATTTA-TTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGGCAACACTATAATATTGTTACGCAAANCTAANT--ACCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGA-G-AAAAGTCAACTGAGCGAATNNNNNNNAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT---TTATTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
finalCons : AGANAACTGAGATAGGGNGAAAGGAGTGAAACAGTTATAGTTGGATAANTTCNTTCTACAATAANTGGTNGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-TTTTATCTATTTA-TTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGGCAACACTATAATATTGTTACGCAAANCTAANT--ACCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGA-G-AAAAGTCAACTGAGCGAATNNNNNNNAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTTA-----TTT-TTTTTA-TTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): CTATTTAATGTTATCAAATAAATTTAAAATAATGTGTAATGTTTTTTAAATCTTCAAGCTCTTTTTGCTAACTCCTTGTTTCTAAAGTCAATGCATTAAAAGTGTACAGTTAAATCATTTAAATGAGCAGTTAAA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22222222 22 1 1 11 11 1 888888888888888 33333 1 111 3333333 777777777777777777777777777777777777777 2 44444444444444 1 1111 222222 1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 1 1 1 1 1 1 0 77777777 7 00 0 0 99 3 2 1 1 33 2 0 9 1 333333333333333 33333 0 666 6 3 9999999 111111111111111111111111111111111111111 0 0 0 77777777777777 0 7777 8 0 333333 0 0 8 8 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 1 0 5
lowQualScore : . . . . . . . ........ . .. . . .. . . . . .. . . . . ............... ..... . ... . . ....... ....................................... . . . .............. . .... . . ...... . . . . ............................................................................................................................... . . .
lowQualScore : 0 0 0 0 0 0 7 77777777 3 77 0 0 88 2 0 0 0 88 5 0 2 0 333333333333333 33333 0 777 7 7 7777777 333333333333333333333333333333333333333 4 8 8 00000000000000 6 4444 0 8 000000 8 6 0 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 4 6 0
consensus : AGANAACTGAGATAGGGNGAAAGGAGTGAAACAGTTATAGTTGGATAANTTCNTTCTACAATAANTGGTNGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-TTTTATCTATTTA-TTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGGCAACACTATAATATTGTTACGCAAANCTAANT--ACCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGA-G-AAAAGTCAACTGAGCGAATNNNNNNNAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT--ATTT-TTTTT------ATTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
Reference ( family-4921 ) : AGANAACTGAGATAGGGNGAAAGGAGTGAAACAGTTATAGTTGGATAANTTCNTTCTACAATAANTGGTNGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-TTTTATCTATTTA-TTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGGCAACACTATAATATTGTTACGCAAANCTAANT--ACCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTANTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGA-G-AAAAGTCAACTGAGCGAATNNNNNNNAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTT--ATTT-TTTTT------ATTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
gi|1 : AGACAACTGAGATAGGGAGAAAGGAGTGAAATAGTTATAGTTGGATAAATTCATTCTACAATAACTGGTGGTAATACCATTGTCGATTCCTCTAAACGTAAATAACATACGCTTCTTAACTAACTCGTTTTT-----ATCTATTTAGTTTTTTT-AA-ATAATACTGCTT-GTTTAATAACGATATGAACCCACCGTGTGATGACAACACTATTATATTATTACACAAAGCTAAAT--ACCATTTCAT-TCCAACTTGATGTTATATTCCTTTAATTGATGCGCTACTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGTATTGTAATGTATGATGTGCCTGTTACTTTGATATAC-TGTATACTTATTTTCTTACTATAGGAGTATTAAAAGAGAAAGA-GGAAAAGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGGGATTGATAGAGCACTGCATAAACAACAGGACTTTTCATTTCAACTAACATGTACTGAAGTTTTTTACTCTTTATTTGAATATAACACATATTG-------------GTG------AAGCT--------------GATAACAAATTTACCTTATGAATGAACTATTATACAATACACATTATTGCTATTTTATTTTTTATTTGTTTTT------ATTAAATTATTATCAAATCTATTGGATGTAATGGAACGTTTTATATGTATATGCAAATAATTTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATGTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCTATTGTTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTGCTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCT-AATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAAGTTGATGCTATTTTGACGAATTCGGGTTGAAGCGATTTAAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCTATATCTGAATCGTCGGTATTAGATTTGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGCATTATTTTCTTGTGCCAAAGC-----ATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAATATCCTCGGCGACAGCAAACTACTGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTTTAAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACTGCGAACTTTTTATATGAGCATAGAATGTGCACATCACATTTTATTTTGTTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATCAAA
gi|10 : AATTTGAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACAGCAAACGTTTTATAAGGGCATAGAATGTGCACATAACATTTTATTTTGTTGGTTGCATAA-ATTTCGCATTAGTAACGCTATTTAATGTTATCAAA
gi|11 : GTAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCATTTTT-TTTT---TA---A---------AA-AAAATACTGCTT-GTTTAATATCGATATGAACCCACCGCGTGATGGTAACAGTATAATATTGTTACACAAAGCTAACT--ATAATTTCAT-TCAAACTTGATGTTATATTTCTTTAATTGCTGCGCTATTTTGGTCCACGGAGAGTCTAGCGTAACAAGTTTTGTTAAAGGTGGGTTTATAAGTAATGTATGGTATTGTTATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTATtaagtttaaaataatatgttatgttttgtaactcttcaaccactttttgttggctccttgtttctaaagtctatgcataagaagtgtagagttaattcatttaaataaggagttaaaactaaatcctcaatgttgacagattacctataacatactggtcgaaatatcatcagtgcgcttatatttctttatcaaataccccccatctgttgtc
gi|12 : TGAAAGACATGGGTGTTACATACTAGTATACTCCGAGTTACCGCGAACGTTTTATATGGGTATCGAATGTGCACATCACATTTTATTTTATTGGTTGTATAC-ATTTCGCTTTAGTAACGCTGTTTAATGTTATCAAA
gi|14 : TTT-AACATAATACCGATAAGTTTTATAACGATTTGATTCCACCATGCGATTGCAACACTATAATATTG-CATGCAACTTTAAGCAAACCATTT-ATATC-AACTTCATATTAtaagtttaaaataatgtgttacgttttgatactcttcaaccactttttgttgactccttgtttctgaagtctatgcat
gi|15 : AACTTAAAAGACATGAGTGTTATATACTAGTATACTCCGAGTTA------ACTTTTTATATGGACATAGAATGTGCACATCACATTTTATTTTGTT
gi|16 : GAAAGACATGAGTGTTACATATTAGTATACTCCGAGTTACCGCGAACGTTTTA
gi|2 : AGAAAACTGAGATAGGGCGAAAGGAGTGAAACAGTTATAGTTGGATAATTTCTTTCTACAATAAGTGGTTATAATACCATTGTCGATTCCTCTAAATGTAAATAACATACGCTTCTTAACTAACTCGTTTTTATTTTATTTATTTA-TTTTTTTTAA-ATAATACTGCT--GTTTAATAACGATATGAACCCACCGTGTGATGACAAGACTATAATATTGTTACACAAACCTAACT--ATCATTTCAT-TCAAACTTGATGTTATATTCCTTTAATTGCTGCGCTAGTCTGGTCCACGG---------------AAGTTT-----AAGATGTGTTTATAAGTAATGTATGGCATTGTAATGTATGATGTGCATGTCACTTTAATATAC-TATATACTTGTTTTCTTACTATAGAAGCATTGAAAGAGAAAGA-G-GAAA----------------------AGTCAACTGAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------NNNNNNNTTGATAGAACACTGCATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTTT-ACTCTTTATTTGAATATGACACATATTGATTGAACAGTATCATGTTTTGAAAGCT--------------AATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTTTACTTT---------TTT------ATTAAATTATCATCAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAAGA-AACATAAAAAAAATTATGTTTTTCTACAGAAAATATCATCATAACAAATGTTTATGTACGAATTCAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAACACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTTGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTATTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATTTGATGCTATTTTGTCGAATTCGAGCTGAAGCGATTTTAATGCATAATCAACCATGTC------------TATTGTTTCTTCCTTATTATCTGAGTCTGATTCCATATTTGAAACGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTAGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCCGATAGCCTCGACGACAGCAAACTACTGAATGA
gi|3 : TATACCTATATACTTATTTTCTTACTATAGAAGTATTAAAAGAGAAAGACG-AAAAGTCAACTAAGCGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------CCGGGGATTGATAGAGCACTGTATAAACAACAGGAATTTTCATTTCAACTAACATGTGCTGAAGTTTAT-ACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCTAATACAATTAAATGGATAACAAATTTACCTTATGAATGAACTATAATACAATACACATTATTGCTATTT--------ATTT-TTTTT------ATTAAATTATCATCAAATCTATTAGATGTAGTTGAAAGTTTTATATGTATATGCAAATAATATCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TTATTTTTTCCTACAGAAAATATCATCATAACAAATGTTTATATCCGAATTTAGCCATTGGAAGTAATGTCAGGCGGATTTATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCATCTCTCTCGAAATCGTCTTTTTCTTTCAGTCGCCTGGCAGTCCGTTTGATAGTAGTATGAATGGTATATTTTCTCATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGAAGCTATCTGTATTTCGGCAAAAGTTCGTTCAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAATCTGATGTTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAACGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCTTATCTGAATAGTCTTTATTAGTTTCGTCGGTAAGTTCGTCTTTCTTCAGCTTTTCCTCGGAACTATCGTCTCTGCGAATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGAtttgttcacttttattaattccttatatatatataaagtattggtatta
gi|3 : TATATTTGAAAGACATGAGTGTTACATACTAGTAAACTCTGAGTTACCGCAAACTTTTTATATGGGCATAGAATGTGCACATCACATTTTA-TTTGTTGGTTGCATACTATTtttgttcacttttaattcatatatatatataaagtattggcataaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatatttgaaagacatgagtgttacatactagtaaactctgagttaccgcaaactttttatatgggcatagaatgtgcacatcacattttatttgttggttgcatactattatgtactgaagtttaatctta
gi|4 : tatacctatatacttattttcttactatagaagtattaaaagagaaagacgaaaagtcaactaagcgaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccggggattgatagagcactgtataaacaacaggaattttcatttcaactaacatgtgctgaagtttatactctttatttgaatataacacatattgattgaacagtatcgtgttttgaaagctaatacaattaaatggataacaaatttaccttatgaatgaactataatacaatacacattattgctatttattttttttattaaattatcatcaaatctattagatgtagttgaaagttttatatgtatatgcaaataatatcagacaactcatgctataactactaattacaaacaacataacataaaaatattattttttcctacagaaaatatcatcataacaaatgtttatatccgaatttagccattggaagtaatgtcaggcggatttatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcatctctctcgaaatcgtctttttctttcagtcgcctggcagtccgtttgatagtagtatgaatggtatattttctcatcgaatcgaaccataaaaccctgaataaatatttatcgataagaagctatctgtatttcggcaaaagttcgttcaatgccttttttcttgcttgcttttcattcagttcatcgtcgttcacaaaatctgatgttattttgtcgaattcgggctgaagcgattttaatgcataatcaaccatgtcgtaccaacggtctattgtttcttccttttcatccgagtctgattccttatctgaatagtctttattagtttcgtcggtaagttcgtctttcttcagcttttcctcggaactatcgtctctgcgaattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggcgaacatcctcggcgacagcaaactactgaatgatttgttcacttttaattcatatatatatataaagtattggcataaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTGATAGAGCACTGCATAAACAACAGGAATTTTCATTTCAACTGACATGTGCTGAAGTTTTT-ACTCTTTATTTGAATATAACACATATTGATTGAACAGTATCGTATTTTGAAAGAT--------------GATAACAAATTTACCTTATGAATGAACTACTATACAATACACATTATTGCTATTT-ATTT---ATTT-TTT--------ATTAAATTATCAACAAATCTATTAGATGTAGTTGAACGTTTTATATGTATATGCAAAT---CTCAGACAACTCATGCTATAACTACTAATTACAAACAATA-AACATAAAGATA-TTATGTTTTCCTACAGAAAATATCATCATAACGAATGTTTATATACGAATTGAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGAGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGATAGCATTATGAATGGTATCTTTTCTTATCGAATCGAACCATAAAACC-TGAATAAATATTGATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTTACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGTATTAGATTCGTCGGTAAGTTCTTCTTTCTCCAACTCTTCCTCGGAACTATCGTCTCCGTGTATTATGTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTACTGAATGAatgtactgaagtttaatctta
gi|4 : gtTAAATTT-AAAGACATGAGTGTTACATACTAGTATTCTCCGAGTTACCGCGAACTTTTTATATGGACATATAATGTGAACATCACATTTTATTTTATTGGTTGCATAC-ATTTCGCTTTAGTAACGCTATTTAATGTTATtttgttcacatttaattaattccttatatataaataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatttaaagacatgagtgttacatactagtattctccgagttaccgcgaactttttatatggacatataatgtgaacatcacattttattttattggttgcatacatttcgctttagtaacgctatttaatgttat
gi|5 : gtattgatagagcactgcataaacaacaggaattttcatttcaactgacatgtgctgaagtttttactctttatttgaatataacacatattgattgaacagtatcgtattttgaaagatgataacaaatttaccttatgaatgaactactatacaatacacattattgctatttatttattttttattaaattatcaacaaatctattagatgtagttgaacgttttatatgtatatgcaaatctcagacaactcatgctataactactaattacaaacaataaacataaagatattatgttttcctacagaaaatatcatcataacgaatgtttatatacgaattgagcgattggtggtaatgtcaggcggattatactccttaagcactttgtcaaagagatatttccgtttcttagttgcgtacttccaggactcttcactctcgaaatcgtcttcttctttcagttgtctggctgtccgtttgatagcattatgaatggtatcttttcttatcgaatcgaaccataaaacctgaataaatattgatcgataagaagctttctgtatttcggcaatagttcgttgaatgccttttttcttgcttgcttttcattcagttcatcgtcgtttacaaaatctgatgctattttgtcgaattcgggctgaagcgattttaatgcataatcaaccatgtcgtaccaagggtctattgtttcttccttttcatccgagtctgattccatatctgaatcgtcggtattagattcgtcggtaagttcttctttctccaactcttcctcggaactatcgtctccgtgtattatgttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacaggcgaacatcctcggcgacagcaaactactgaatgatttgttcacatttaattaattccttatatataaataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAGTTTTTTACTCTTTATTTGAATGTAACACATATTGATTGAACAGTATCGTGTTTTGAAAGCT--------------GATAACAAATTTACCTTATGGATGAACTATTATACAATACACATTATTGCTATTTTATTTT--ATTT-TTTTTTTTTTAATTTAATTATTATCAAATCTATTGGATGTAATTGAACGTTTTATATGTATATGCAAATAATCTCAGACAACTCATGCTATAACTACTAATTACAAACAACATAACATAAAAATA-TGATGTTTTCCTACAGAAAATATCGTCATAACAAATGTTTATATCCGAATTTAGCGATTGGTGGTAATGTCAGGCGGATT-ATACTCCTTAAGCACTTTGTCAAAGGGATATTTCCGTTTCTTAGTTGCGTACTTCCAGGACTCTTCACTCTCGAAATCGTCTTCTTCTTTCAGTTGTCTGGCTGTCCGTTTGGTAGCAGTATGAATGGTATCTTTTCTTATCGAATCGAACCATAACACCCTGAATAAATATTTATCGATAAGAAGCTTTCTGTATTTCGGCAATAGTTCGTTGAATGCCTTTTTTCTTGCTTGCTTTTCATTCAGTTCATCGTCGTTCACAAAAGCTGATGCTATTTTGACGAATTCGTGCTGAAGCGATTTAAATGCATAGTCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCTATATTTGAATCGTCGGTATTAGATTCGTCAGTAAGTTCTTCTTTCTGCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCAAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGGCGAACATCCTCGGCGACAGCAAACTAATGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTAAAAGACATGAGTGTTATATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGACA
gi|6 : AATTTGAAAGAAATGAGTGTTACATACTAGTATACTCCCAGTTACCGCAAACGTTTTATAAGGGCATACAATGTGCACATCATATTTTATTTTATTGGTTGCATAC-ATTTCGCTTTAGTAACGCTTTTTAATGTTATCAAA
gi|7 : ATAC-CTTTCGCTTTAGTAACGCTATTTAATGTTATCAAAtaagtttaaaataatgtgttatgttttgtaactcttcaaccactttttgttggctccttgtttttaaagtctatgcattagaagtgtagagtaaactcatttaaatgaggagttaaaactaaatcctcaaagttgacagattacctataacatactggtcgaaatatcatcagtgcgcttatatttctttatcaaataccagcatctgttgtcttgtacacatgtttgccttaagcaaactgatctatacgatactttaagtatatacaaattggaatatgtatacccattatttatgtaggctataagtttagccacaaaatttacttcgacgattactcttaaagttaatttggtcatatattccaaacttcatctaattattattgttacgccgttaaaataatttaactgcaattaagcttcattcaaataagacaatcatttaatagcttttaaga
gi|8 : CAAGGGTCTGTTGTTTCTTCCTTTTCTTCCGAGTCTGATTCCATATCTGAATCGTCGGTATGAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCGGAACTATCGTCTCCGTGTATTATTTTCTTGTGCCGAAGCATATTATCTTTACGTTTATACTCCTTTTTACAAAGATCACAGCCGAACATCCTCGGCGACAGCTAACTACTGAATGAtaagtttaaaataatgtgttatgttttgtaaatcttcaaccactttttgttgactccttgtttctaaagtctatgcattagaagtgtagagttaactcatttaaatgaggagttaaaactaaatcctcaatgttgacagattacctataacagactggtcgaaatatcatcgtgcgcttatatttctttatcaaatacccccatctgttgttttatacatatatttaccttaagcaaactgatctatacgatactttcagtatatacaaagggtatatgtatacccattatttatgtaggctataagtttagccacaaaatttacttcgacgattactctttaagttaatttcgtcatatattcccaacttcatctatttattattgtaacaccgttaaaagagtttaactgtaattaagcttcattcagttaaggcaattatttataagcatttcaaaatcatttacacaggcttt
gi|8 : TAAATTTAAAAGACATGAGTGTTACATACTAGTATACTCCGAGTTACCGCGAACTTTTTATATGGACATCTAATGTGAACATCACATTTTATTTTGTTGGTTGCATAC-ATATCGATTTAGTAACGCTATTTAATGTTATCAtttgttcacttttaattataatataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatttaaaagacatgagtgttacatactagtatactccgagttaccgcgaactttttatatggacatctaatgtgaacatcacattttattttgttggttgcatacatatcgatttagtaacgctatttaatgttatca
gi|9 : caagggtctgttgtttcttccttttcttccgagtctgattccatatctgaatcgtcggtatgagattcgtcggtaagttcttctttctccagctcttcctcggaactatcgtctccgtgtattattttcttgtgccgaagcatattatctttacgtttatactcctttttacaaagatcacagccgaacatcctcggcgacagctaactactgaatgatttgttcacttttaattataatataaagtattggcatgaccaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTATCGAATCGAACCATAAAACCCTGAATAAATATTTATCGATAAGGAGCTTTTTGTATTTCGGCAATAGTTCGTTGAATGCCTTTCTTCTTGCTTGCTTTTCATTCAGTCCATCGTCGTTCACAAAATCTGATGCTATTTTGTCGAATTCGGGCTGAAGCGATTTTAATGCATAATCAACCATGTCGTACCAAGGGTCTATTGTTTCTTCCTTTTCATCCGAGTCTGATTCCATATCTGAATCGTCGGCATAAGATTCGTCGGTAAGTTCTTCTTTCTCCAGCTCTTCCTCTGAACTATCGTCTCCGTGTGTTATTTTCTTGTGCCGAAGCATATTATCTTTTCGTTTATACTCCTTTTTACATAGATCGCAGGCGAACAACCTCGGCGACAGCAAACTACTGAATGA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): CTATTTAATGTTATCAAATAAATTTAAAATAATGTGTAATGTTTTTTAAATCTTCAAGCTCTTTTTGCTAACTCCTTGTTTCTAAAGTCAATGCATTAAAAGTGTACAGTTAAATCATTTAAATGAGCAGTTAAA