lowQualScore : 1111111111111 111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111 1111111111111111111111111111111111111111111111111111111111 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 1 222 11111111 666666 11 111111 7777777777777 333333 222222 666666666666 1 11 444444444444444444444444444444444444444444444444444444444444444444 1 2222 222 1 11 11 11111 1 111111 111111111 1 1 3333 1 111 111 3333333333333333333333 1 22222 333 11 1 2 444 11111 2222 1 5555555555555555 1111111111 1111111111 11 222222222222222222222 1 3333333333333 3 111 1111 222 1 2222222 1 1 11 2222222222222222222222222222222222222222222222222222222222 1111 2222 3333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1 111111 111 2222 33333333333333 22 11 66666666666666666666666666666666666 2 333 3333333333333333 222 11 1
lowQualScore : 6 7 6 6 888 22222222 0 666666 11 000000 2222222222222 4 444444 2 888888 3 666666666666 6 9 66 0 55 666666666666666666666666666666666666666666666666666666666666666666 1 6 1 3 5 6 8888 6 333 7 44 3 1 55 6 11111 3 3 5 666666 777777777 4 7 4 6 1 888 1 3 5 5 6 7 5 5 2222 3 2 1 111 44 111 6 6666666666666666666666 77 6 5 77 22222 5 000 55 5 0 0 5 333 22222 0000 3 66 2 3 66 7777777777777777 6666666666 7777777777 55 3 2 5 2 11 000000000000000000000 55 0 5 6666666666666 5 55 6 1 2 5 4 5 5 2 4 0 666 1 1111 111 4 4 0 2222222 2 0 1 1 5 7 33 6 1 8 0 0000000000000000000000000000000000000000000000000000000000 55 1 0 3 2222 00 6 8 5 2 2222 0 5 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 3 5 3 444444 888 5 1 333 5 0000 2 44444444444444 33 22 11111111111111111111111111111111111 4 6 4 666 4 66 4 8 8888888888888888 5 000 5 5 5 6 2 7 00 5
lowQualScore : . . . . ... ........ . ...... .. ...... ............. . ...... . ...... . ............ . . .. . .. .................................................................. . . . . . . .... . ... . .. . . .. . ..... . . . ...... ......... . . . . . ... . . . . . . . . .... . . . ... .. ... . ...................... .. . . .. ..... . ... .. . . . . ... ..... .... . .. . . .. ................ .......... .......... .. . . . . .. ..................... .. . . ............. . .. . . . . . . . . . . ... . .... ... . . . ....... . . . . . . .. . . . . .......................................................... .. . . . .... .. . . . . .... . . ...................................................................................................................... . . . ...... ... . . ... . .... . .............. .. .. ................................... . . . ... . .. . . ................ . ... . . . . . . .. .
lowQualScore : 0 0 0 0 000 33333333 7 000000 33 777777 0000000000000 0 777777 2 888888 2 222222222222 0 8 88 0 22 444444444444444444444444444444444444444444444444444444444444444444 0 0 0 7 0 0 3333 7 333 0 00 7 0 00 7 33333 7 7 0 777777 444444444 0 0 0 0 0 444 0 0 0 0 7 8 0 4 6666 0 8 4 444 44 777 7 0000000000000000000000 88 0 0 22 44444 2 000 00 0 0 0 0 000 55555 2222 6 99 2 9 11 2222222222222222 6666666666 5555555555 55 7 6 4 3 66 111111111111111111111 55 7 2 6666666666666 4 55 9 6 2 5 0 4 1 3 3 9 777 9 6666 333 4 0 1 9999999 2 1 7 2 7 3 99 0 0 0 1 9999999999999999999999999999999999999999999999999999999999 22 1 2 1 2222 44 6 8 0 2 6666 2 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 6 0 6 444444 888 0 4 333 7 2222 5 22222222222222 55 00 77777777777777777777777777777777777 4 7 4 888 3 11 1 8 9999999999999999 7 666 2 0 2 5 2 0 66 0
consensus : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGGC-TAATTTTCCG-GTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGGCTGAAATA---------TAGNGTATCGNC---GATTCGCTACTT------TGGTCAAACTA--AA---TGTGATACGGACATAGAAANAGAGTTCGAAGCGGAGAGACTGATAATT-TACC-GAGGCG--GA-AATTGTAGCGGAGGCGGTGACAATT-TAC-GGAGGCG-TGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTNCGTGTTTGCAA-GTANATGCTCAGAAGAGACCANTGAACTATTCCGAGC-G-CACACCCATTCT--ANATCGCTGCNACAACTAAGCACTTACCTGGTCCTCTAGATCAATGGTTCG-TGAGAAATGCCGTCG--GGGTAAACAAGCTCCAATCTATGATGACACGCATG---AC-TAA---------ATCTGCTGGTATCACAACNGACAAGAAAC-TGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGA-CAACAATGTTCCTGCAAANTCACATCATGCAAAT-AT-CCGGT-CACNAAAAC-----ATAT--CCTCTGTGA--ATAACTACTGTCACATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACT--CGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAGCGCACATATTATTCA------CA--GGTCAACTC-GAACTCTATGAACACGGCATCGCCAGCTCA--TGTCGACGTGACCGGTGTAA-TCCAAAGCATTTT-CGGTGCTCAAATTCACGGAGGTACATTCAATGTACATGTAAACCAA-GTTAAAAGCAGCT-C-C-CCGCCACAGCAACAAATTAGAAAGANAATTCG-ACTCATTGTTGACAGTGACACTGACTCTCAACG-----AATAAAACACGATTCGCNATCACACGCGC----------GTTN--AAA-CATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATNACGTCA-GTATGGTGTTGCAT---TGTA-ATCGCG------------------TG----------------T-TT-TGTT--AAA----GA-T----------T------CAG--AT----AT--NT----GT----A-CG-----NTT----ATTGCTA-AAAT------ATA---GTGTTT-TGTTGTTGGTTATTGATTT-AAAG--AAACAA-----GTA-T--AAAAATCTGAGAGAAAANATT-AATAATAATAAAA-AAAA----T----T------TACGGA-CTAC-TTTTTGT-TGCATTTGT--TTCAATGAATGGTAACCGAATTACACC-----TACT-------T-CATGTTGTTTACCAGGTAGCC-AGGCCGTCGCTTTGAAGT-CTTTTTCTCCCTCAAAT
Reference ( gi|1 ) : TACGCGCTATCAAATAATTAAAGCAAACATGGTTGATCTAATTTTCCGAGTCGGTAATTCGATCAGTGCAAATTGATGGGAAAGGCATGGGCGTTGTGACTGAAATACTAGTCTAGTAGTGTATCGGC---AATTTGCTACTT------TGGTCAAACTATAGA---TGAGATGCGGACATAGAAATAGAGTTAGAAGCGGAGAGACTGACAATTGTACCGGGGGCGATGACAATTGTACCGGGGGCGGTAGCAATTGTACCGGGGGCGATGGCATTTCGAAAAGTATTCGTGTCGTCCGACTTTA----GCTTTGGGCAAATACAGC---AGAATCTTTCAAATGTCCTGTGCGTGTTTACAATGTAGATGCTCGGAAGAGACCACTGACCTATTCCGAGCCGACACACACTTACT--ATATCGCAGCTACAATTAAGCACTTACTTCGTCCTCTGGATCAATGGTTTG-TGAAAAATGCCTTAC--GGATGAACAAGCTCCAATCTATGACGACACACATG---AC-TAA---------ATC----------ACAACAAATAAGACAT-TGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAATTGAATAA-AAACAATATTTCGGCAAATTCACATCATGCAAAT-AT-C-GGT-CACTTTAAC-----ATTT--CCTCTGTAA--ATAACTACTGTCATATCAACGCGAAT--C----------------CAACAT-------TTTA----------CACT--CAAACGACACAAATATGCTAATTCCACATGCTCCAAATGTTCACCAGCACACATACTATTCA------CA--GGTAAACTC-TAACTTTTTGACCACGGCATCACCAGCTCA--TGTTAACGTGACCGGTGTAA-TCAAAAGCATTTTACGGTGCTCAAATTTACGGCGATACATTCAATGTAAATGTAGAACAA-GTTCAAAGCAG-T-C-C-CCGCGACAGCAACAATTTAGAAAGAAAATTCC-ACTTATTGTTGACAATGACACTGACTCTCAATGCTTTGAATAAAACACGATTCACCATCACATACGC----------GTT---AAA-CATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTATATGACGTCA-GTATGATGTTGCAG---TGTA-ATCGCG------------------TG----------------T-TT-TGTTAAAAAA---AA------------T------CAA--AT----AT--AT----AT----A-CG-----GTT----ATTACTA-AGAT------ATA---GTGTTT-TGTTGTTTGTTATTGATTT-AAGG--AAACAA-----GCA-T--AGAAATAAGAGAGAAAAGATT-GATAATAATAAAA-AAAA----T----T------TACGGA-CT-C-TTTTTCA-TGCATTTAT--TTTAATGAATAGTAACCGAATTACACC-----CAAT-------T-CATGTTGTTTACAATGTAGTC-AGACTGTTGCTTTGAAGT-TTTTTTCTGCCTCAAAT
gi|15 : TACGCGCTGTCAAAAAATCAAAACAAACATGGCTAACATAATTTTCCGTTTCAGTAAT----TCAGTGTTAATTGCTGGGAAAGGCCTGTGCGTTGTGACTAAAA-----------TAGAGTATCGTG---GATTTGCTATTTTTTATATGGTCAAACT----A---TGTGATATGGACATTGAAAGAGAGTTCGATTAGGAGAGACTGGTTATTGCACCTGAGGC
gi|14 : GCTGTCAAAAAATCAAAACAAACATGGTTG---TAA--------GTCAGTAATTC----AGTGCAAATTGA-----AAGGCATGGGCATTG------AAATA-----------GTGAATTGCC---GATTCGCTACTT------TGGTCAAAC----AA---TGTGATACGGACATAGATAAAGAGTTTGTAGTGGAGAGACTGATAATTTTACCAGAGGCGTTGACAATTtg
gi|18 : atggCTGTAAAAAACTCAAAACAAACATGGTTGGCCTAATTTTCCAAGTCGGTAATTC----AGTGCAAATTGGTGGGAAAGGCATGGGCGTTGTGGCTGAAcgaaaaatgtttgtctcatccgaccttacttttgggcaa
gi|13 : GTATCGACTGAAATTCGCTATTT------TGGTCAAACTAT-------GTGATACGGACAT-GAAAT----TTAGAA--------ATTGAGAGTT-T----GAAGCGAAGA-------------GAC--TGACAATTGTATAGGAGGCGGTGATAATCCGAAAAATGTTAGTCTCGTCCGACCTTAGCCGGCTTTGGAAAAATACAGT---AGATTCTTT-AAATGCCCGGTCCGTGTTTGCAtctccgattcgcaac
gi|7 : aaaaattcagtgcaaatatttggaaatgccatcATTCGCTACTT------TGGTTAA-TTAAAAACATTGTGATACAGACACAGGAATAGAGTTTGAAGCGGAGAGACTAAC---------------------AATTGTAGCGGAGGCGGTGACAA---------------------TCCGAAAAATATTCGTCTTGTCTGACCTTA----GCTTT-GGCAAATATAAC---AGATTCTTTC-AATGTCCTGTACGTGTTTACG--GTAGAT-----------ACCACTGAATTATTCCG-------ACACGCTCATTCGAAATCACTGCTACAACTAAATACTTACCTGATCCTCTAGATCGATGGTTCGATGA
gi|14 : gAATTTTACCAGAGGCGTTGACAATTCGAAAAATGTTTGTCTCATCCGACCTTA----CTTTTGGGCAActaaatcttttggtatcataacggacaagaaactgacaaaccacagtgccaggaaatatttgcttcagaaattgaatgacaaacaaaatcaactcatgcaaattaccggttactaaaacatgtcctatgagaataattactgtcacatcaacgagattctaacattttagactcaaacgacacacaaatgccaattacacatgctccaaatgctcagcagcacacaaactattcacagatcaaatctaatcgccggctcatgtcaacgtgacctggtaattcaaatcattttcggtgctgaaattcacaaaggtacattttatatcgtataaaccaagttaaaatcagctccccgccacagcaacaaattagaaaattcgactcattgttgacagtggca
gi|2 : atgggctgtcaaaaaatcaaaacaaacatggttgtaagtcagtaattcagtgcaaattgaaaggcatgggcattgaaatagtgaattgccgattcgctactttggtcaaacaatgtgatacggacatagataaagagtttgtagtggagagactgatAAATACAGCTGCAGATTCTTTCAAATGTCCTGTGCGTGTTTGAAAAGTACATGCTCAGAAGAACCCATTGAACTATTCTGAGCCGTCACACCCATTTT--ATATCGCTGCAGCAACTAA-------CCCGGTCCTCTAGAGCAGTGGTCCG-TGAGAAAT--CTTGTCGGGGTAAAAAAGCTCAAATCTATGATGACTTGCATG---AC-AAA---------ATCTACTGGTATCACAACAGACACGACAT-TGACAAACCACAGTGGTAGAAAAGATTTGCTTTAAAACCTGAACGA-CAACAATGTTCCTG-----TCA-ATCATACAAAT-AT-CCGGT-CACAAAAAC-----ACAG--CATC---AACGATAATCA--G-CATA-AAAC---AATTTC----------------TAAAAT-------TTTA----------CGCT--CGAACAACACAAATTTGCCAATTTCCCATGTTCTAAATGTTCAGCAGTACGCATATTATTCAATTATTCAAAGGTCAACTC-GAATTCTATGAACACGGCCTCGTCAGCTCA--TGTGGAAGTGACCGGCGGAA-TACAAAGCATTTT-CGGTTCTCAAATTCATGGAGGTACATTCAATGTACATGTAAATCAA-GTCAAAACCAG-T-TAT-CCACCACAGCAACCAATTAGAAAGAGAATACG-ACTCACTGTTGACAGTGACACTGAC-----GTG----AAACAAAATACGAATCGCAATCACA--CGC----------GTTTTTAAA-TATCGAAGATCGCAGCATATAA--TCTGACAGAGGTACTGCATCACGTTA-GTATGGTGTTGCGT---TAAA-ATCGCG------------------TG------------------------TAATAGATCTAACTGTTATTGTTTT------CAATTATTTTCAT--AT----ATTGGCA-CA-----CTT----ATTGCTT-GCAT------AAA---GTGTTT-TGTTGCTGGTTATTAGTTTAAAGA--AAACAA-----GTA-T--AAAAATCAGGGAGAAA-------ATACTAATAAAATAAAA----TTCC-T------TTTGAA-CTAC-TTTTTGT-TGC--TAATGATTCAATGAATGTTAACCGAATTACACC-----
gi|3 : CAATGTATATGCTCAGAAGAGACCTAAGAACTATTCCGAGCAGACATACCCATTCT--AATTCGCTGGTACAACCCAGCCCTTAACTGGTTCCCTGGATCAATA-----------------TCAA--GTAT--ACTAGCTCCAATATATGA----ACACATGCATAC-TAT---------ATCTGCAGGTACTACAACAGACAAGAAAC-TGACAAACTACATTGCCAGAAAATATTTGCTTCGAAAATTAAATGA-CAACAATGTT---GCAAAATCACATCATGCAAAT-AT-CCGGT-CACTAAAAC-----ATAT--CGCCTGTGA--ATAATTACTGTCACATCAACGAGAAT--C----------------CAACAT-------TTTA----------CACT--CAAACAACACAAAT--------TCCACATGCTCCAAATGTTCAGCAGCATACATATTATTCA------CA--AGTCAACTC-AAACTCTATGAACACGGCATCAACAGTTCA--TGTCAACGTGACCGGTGTAA-TCCAAATCATTTT-TGGTGCTTAAATTCACGGAGGTACATTCAATG-----ATA-ACCAG-GTTTAAGGCAGCT-C-C-CCGCCACAGCAGCAAATTAGAAAGACATTTCG-ACTCA-------------CACTGACACTCAAC---------AAAACACAATTCACAAACACACGCGT----------GTT---AAAACATTGAAGGTAGCGGTATATGAACTATGACATAGGTACTGTATGACGTCA-GTATGGTGTTGCAT---TTTA-ATCGCGTGTTTTGAATCTAACTGTTG----------------T-TT-TTTTTAA--------------------TTTTTTTCTG--AT----AT--CG----GT----A-CG-----CTT----ATTGCTA-AAAT------ATA---GTGTTT-TATTGTTGGTTATTGATTT-AAAG--AAA-AA-----GAAGTTAAAAAATCTGAGAGAAAAAATT------TAAAAAAT-GAAATTCTT----T------TACGGA-CTAC-TTTTTTGTTTCATTTGT--TTCAATGAATGGTAACCGAGTTACACCTTAGGCTAC-------TGTATGTTGTTTACTAGGTAGCC-AGGATGTCGCTTTGCAGT-CTTTTTCTCCCTCAAATt
gi|5 : CT--ATATGACTGCAACAACTTAATACATATTTGGTCGTATAGATCAGTAGTTTG-TAAGAAATGCCGTCG--GGGTAAACAAGCTCCAATCTATAATGCTATGCATG---AC-TAA---------CTCTGCTG-----GTATCTGACAAGAAAC-TGACAAACCA--GTGCCCAAACATATTTGATTCAGAAACTGAA-GA-CAACAATGTTCCTGCAAAT-CACATCATGCAAAT-AT-CCGGT-CAC---AAA-----ACTTGTCCTCTGTGA--ATAACTAATGTCGCATCAACGAGAAT--CAGCATACAGAAATTT-CAAAAG-------TTTA----------CACT--CGAACAAAACAAATAAGCCAATTCCCCATGCTCAAAATGTTCGCAAG--------TTATTCA------CA--GGTCAACTCATA-----TAGAGCATGGAATCGTCATCTCA--TGTCAACGTGATCGGTGGAA-TCCAGAGCATTTT-CGGTGCTCAGACTCATAAAGGTACATTTAATGTACAAGTTAATCAA-ACCAAAAACAGTT-C-C-CCGCGAAAACAACCAATTAGTAAGAGAATTCG-ACTCATTATTGACAGTGACA--GACTTTCAACA----AAATGAAAC-----------------GTGT----------GTTA--AAA-TGTTGAAGGTCGCCGCAAATGAACTATG----------------ACGTCA-GTATGATTTTGCAT---TGTA-ATTGCG------------------TGTAATGGATCTGACTGTT-TT-TGTTTTAAAC---CATTT---------T------CAG--AT----ATTGGT----AC----G-CG-----A------ATAGCTA-ACAT------ATA---ATGTTT-TGTTGTTGGTTATTGATTT-AAAGC-AAAGAA-----GTA-A--AAAAATCTGAGAGAAATTATT-GAGA-----AAAA-ATAA----TTCCAT------TACGGA-CTAC-TTTTTGT-TGTAATTGT--TT
gi|4 : gtcacaaccagtCAACTAAGCATTTACCTGGCCCTCTGTATCAATGGTTCG-TAAGAAATGCCGTCG--GGGTAAACTAGCTCCAGTTGATGACGACACGCATG---ACTTAATCTGCTGGTATC----------ACAACAGACTGGAAAC-TGACAAACCTCAGTGCCAGAAAATATTTGCTTCAGAAATT-----C-AAACATTATTCCTGCAAAATCACATCATGCAAAT-ATCC-GGT-CAC--TAACAAATAATAT--CCTCTGTGA--ATATCTGCTGTCACATCAACGAGAAT--C----------------CAA----------TTTA----------TACT--CAATCAATACAATCGTGCCAATTCCATATGCACAAAATGTTTAGCAGCACA------------------A--G------TC-TA------TGAACACGGCGTTGCCAGTTCA--TGTCAACGTTACCTGTGTAA-TCAAAAGCATGTT-CGGTGTTTAAATTCACGGAGGTACATTCAATGTACATGTA----AA-GTTAAAAGCAGCT-C-C-CCGCCACATTAGGAGTTGA-AAAGATAATTCC-A-TCCTTGTTTACCGTGACACTGACTCT--AT-------ATAAAACACGATTCACCACCACACGCGT----------GTTG--AAA-CATTGTAGATCGCAGCATATGAACTATGAATTTGGTTCTTTATGACGTCA-GTGTGGTGCTGCAT---TTTA-ATCACC------------------TG----------------T-TTAGGTTCTAAAT---GATTTTGT------T------TTA--AT----TT--ATTTTCAT----ATCGGTATTGTT----ATTGCTATATAT------ATA---GTGTTT-TTATG-ATGTTTTTTATTT-AA-A--AAACAA-----GTA-A--AAAACTA--AGAGAAAAGATTCAATGA-AATAAAATAAAACTCCT----T------TACGGA-CTAC-TTTTTGT-TTCATTCGT--TCCAATGAATTGTAACCGAATTACACC-----TAATAACCTAAT-CGTAATGTTGACTAGGTAGTC-AGGCCGTCGCTTTGAAGA-ATTTTTCTCTCTCAAATaccaggtagcctggacgtcgttttgaagtattttttatccctcaaatg
gi|10 : cgTTCG-TGAGAAATGCCGTCG--GGGTAAACAAGTTCCAATCTATGATAGCAAGCATG---GC-TAA---------ATCTGCTGGTATCACAGCCGACAAAA-ATCTGAGAAATCACAGTGACAGAAAATATTTGATTCAGAAACTGAGCAACAAACATTGTTCCTGCAAA-TCACATCATGTAAAT-ATCC-GGT-CACAAAAAC-----ATAT--CCTCTGTTA--ATAACAACTGTCACATCAACGAAAAT--CAGCATAAAAAAAATCACAAAAT-------TTTA----------CACT--CGAACAACACAAATATGCCTATTCCTTAGGCTCCAAATGTTCAGAAGGCTGTGTATCATTTA------CA--GGTTAACTC-GAACTCTGTGAACTCGACGTCGCCAGCTCT--TATCGACGTGATCGGGGGAA-CCCAAAGCATTTTA-AGTGCTCAAATT
gi|7 : ATG---AC-TAA---------ATCTTTTGGTATCATAACGGACAAGAAAC-TGACAAACCACAGTGCCAGGAAATATTTGCTTCAGAAATTGAATGACAAACAA----------AATCAAC-TCATGCAAATTAC-C-GGT-TACTAAAAC-----ATGT--CCTATGAGA--ATAATTACTGTCACATCAACGAGATT--C----------------TAACAT-------TTTA----------GACT--CAAACGACACACAAATGCCAATTACACATGCTCCAAATGCTCAGCAGCACACAAACTATTCA------CA--GATCAAATC-TA----------------ATCGCCGGCTCA--TGTCAACGTGACCTG-GTAA-TTCAAATCATTTT-CGGTGCTGAAATTCACAAAGGTACATTTTATAT-CGTATAAACCAA-GTTAAAATCAGCT-C-C-CCGCCACAGCAACAAATT----AGAAAATTCG-ACTCATTGTTGACAGTGGCA
gi|8 : gattcgctactttggttaattaaaaacattgtgatacagacacaggaatagagtttgaagcggagagactaacaattgtagcggaggcggtgacaatccgaaaaatattcgtcttgtctgaccttagctttggcaaatataacagattctttcaatgtcctgtacgtgtttacggtagataccactgaattattccgacacgctcattcgaaatcactgctacaactaaatacttacctgatcctctagatcgatggttcgACAAGAAAC-TGGCAAACCACAGTACCAGAAAATATTTGCTTCAAAAATTGAATTA-CAACAATGTT---ACAAAATCACATCATGCAAAT-AT-CCGGT-CACTAAAAC-----AT----CCTATGTGA--ATAACTACTGTCACATCAACGAGAAT--C----------------CAAAAT-------TTTA----------CACT--CGAACAACATAACTTTGCCAATTC--------------GTTCAGTAGTGCACATATTATTCA------CA--GTTCAAATC-GAACTCTATGAACACGGCATCGCCAGCTCA--TGTCAATGTGACCAGTGTAA-TCCAAAGCATTTT-CTGTGCTTAAATTCACAGAGGTACATTCAATGTGCATAAAAACCAA-GTTAAAAGCAGCT-C-G-CCGCCACAGCAACAAATTAAAAAGAAATTTCG-ACACAATGTTGACAGTTACACTG-------ATGCTC--AATAACACATGATTCACAA--ATGTATGA----------G------AA-GGCTATATGTC---ACATATG---TATGG-GAAGG--CTATAT---GTCACATAT-ATATGGGAAGGCTATATGTCACA------------------TA----------------TATA-TG----AAAA---AA------------T------AAA--AC----AT--TT----AC----A----------T----ATTAGTA-AAAT------ATGTACATGTTTATGT
gi|6 : gAGAAAC-TGACAAACCACAGTGCCAGAGAATATTTGATTCAGAAACCGAACGA-CAACAATGTTCCTGCAAAT-CACATCATGCAAAT-AT-C-CGTTCACAAAAAT-----ATAT--CCTCTGTAA--ATAACTACTGTCATATCAACATGAA---C----------------CAGCATAAAGAAATTTATAAAAGTTAACATTTACAAA--ACAAAAATATGCTGATTCCGCATAATTCAAATGCTTAC-------------------------A--GGTCAACTC-GAAGTCTTTAAACACGGCA----CAG-TCAACTATCAACGTCATCGGTG------AAAAGTAGGTT-CGGTGCTGAAATCCATGGAAATACATT-AGTATAAAAGTA-AACAAAGTTAAAAGCAT-T-T-CGCTGCTACGTCAACCAACTA-ATAGAGAATTAAGACCCATTGTTGACAGTGACACTGACT---AGCG------ATAAAACACGATTC-CCGT-ACATACGCTCGTACGTGTGTTT--AAA-CATTGAATACCGCGGCATATGAACTATGCCGAATGTACAGTATGACATCA-GTTTGGTTTAACGT---TGTA-ATCTCAC-----------------TG----------------T-TT-T--------------------------T------CAG--AT----AT--TG----GT----T-CG-----CTA----ATTGATA-AATT------ATA---GTGATT-T-TTGTTGGTTATTGATTT-GAAGAAAAACAAAATTGATA-T--A-AAATATGAGAGAAAATATT-TATAAC-ATTAAA-TGCT----T----T------TACGGA-CC-G-TTTGT---TACCTTTGT--TTTAATAAATGGTAACCGAATTGCACC-----TACT-------T-TATGTTATTTACAAGGTAGCC-AGGCCGTCGCTTTG-ATT-TTTTTTCTCCTTCAAAT
gi|11 : actT--C----------------CAAGAG-------TGTA----------CACT--CAAACGACGTAATCATACCAATTCCACATGCCCCATATGTTAAGCAGCGCACATAC-----A------CA--GGTCAACTC-GCAATATACAGTCACAGCATCGTCAGCTCA--TGTCGACGT-------------CAAAA-CATTTT-CGGTAC------TTAC------------AAT-TAAATGTCAAACA--------------------------TATCAACCATTCAGAAAGATAATTTG-ACTCAT------------CACTGACTCTCAAT------AGTA---CACAATTTTCTATCATACATGT----------GTTT--AAA-AATTGAATTTTACGAC-TATGACGTAC-ATGTGGGTACCGTATTACGTAA-GTATGGTGTTGTAT---TGTT-ATCGCG------------------TG----------------T-TT-Tgt
gi|9 : cagcacaaagtaagt----------CACT--CAAACAACACATACATGCCAATTCTACATGCTCCAAATGTGCCGCAGCACAC----TATTCA------CA--GATCATCTC-AAACTCTATAAACACGGCATCGCCAGCTCA--TATCAACGTGAATTTTGTAAATCAAA-GCATTTT-TGGTGCTCAACTTCATGGAAGTACATTCAAT-TACATGTAAATCAA-GTTAAAAGCAG-TTC-C-CCACCGCAGCAACAAATAAGAAAGATAATTTC-ACTCATTGTTGACAGTGACAC-GACCCTCAAT---------AAAACAC---------------ATGT----------GTTA--AAA-CATTGAAGATCGTGGTATATGAACTATGACATAGGTACTGTATTAAGTC-----TGGTGTTGCAT---TGTA-ATCGCA------------------TG----------------T-TT-TG-----------GA------------TG-----TAA--CT----TT--TT----TT-------------GTTTTGAATTATTA-A-ATTAAAAAATA---GTGTTT-TGTT--------TTGATTT-AAAG--AAAtacttgtttatattttgaattatgttcagacattgttacgtttactgcttaaacataa
gi|12 : ------------T------CAG--AT----AT--TT----GT----A-CA-----ATT----ATTTCTA-AAAT------ATA---GTCTTT-TGATGTTGGTTATGGATTT-AAaca
gi|16 : gtgtgtttttccattgttatcacgtgttttggatctaactgttttttgttttttttgtttttaattatttAACAA-----GTA----AAAAATCTGCGAGAAATTATT-AATAA-AATAAAA-TTCC----T----T------TACGGA-CTAC-TTTTTGT-TGCAATTGT--TTCAATGAATGGTAACCGAATTACACC-----TACT-------T-CATGTTGTTTACTAGGTAGCC-TGGCCGTCGCTTTGGGGT-ATGTTTCTCCCTCAAATatataataatctgtgacttacgaactactttttgttgcatttgtttcaatgaatggtaactgaagtacacctactttatgttatttaataggtagcctggtcatctttttctccctcaaa
gi|19 : GAGAGAAAAGATT-AATA-TATTAAA----------T----TCCTT--TATGGA-CT-AATTTTTGT-TGCATTTGT--TTCAATCAATGGTAA----------------------------T-CA---TGTTTACCACGTAGCC-AGGCCATCGCTTTGg
gi|17 : AAAT-AAAA----T----TCCTTTGTACAAAGTT-C-GTTTTGT-TGCATTTGT--TTCAATGAACTGTAACCGAAGAACACC-----TACT-------T-CATGTTGATTACCAGGTAGCC-TGGCCGTTGCTTTGAAGT-CATTGTCATCCTCAAAT
gi|12 : ttgA----C----T------TACGAA-CTAC-TTTTTGT-TGCATTTGT--TTCAATGAATGGTAACTGAAGTACACC-----TACT-------T-TATGTTATTTA----ATAGGT-AGCCTGGT-C------AT-CTTTTTCTCCCTCAAA
gi|5 : gtgtgtttttccattgttatcacgtgttttggatctaactgttttttgttttttttgtttttaattattttcagatatttgtacaattatttctaaaatatagtcttttgatgttggttatggatttaaatataataatctgtgTTGTTTACCAGGTAGCCTGGAC-GTCGTTTTGAAGTATTTTTTATCCCTCAAAT
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|20 ): TACTAAGAAGCTAGCCGTTGCTTTGAAGTATTTTAATCCCTCAAGTTAG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 3333 22 1 1111 6666666666666666666 222222 44444444444 111111 99999999999999999999999999999999999999999999999999999999999999 2222 111 3 3333 11 1 5555555555555555 1111111 1111111111 222222222222222222 44444444444444444 222222222 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 111 11111 22 44444444444444444444444444 111111 11111 111111
lowQualScore : 6666 3 00 0 7777 8 3 4 8888888888888888888 3 333333 0 11111111111 6 11 111111 1 55555555555555555555555555555555555555555555555555555555555555 0 0 1111 2 777 55 1 0 0 1 2 0 0 1 2 5555 11 1 1 3 5 0 1 1 5 4 5 1 5 5 66 4 2 4 55 1111111111111111 4 3333333 5555555555 0 1 1 777777777777777777 33 5 3 1 0 1 4 1 3 0 3 0 0 2 2 2 4 22222222222222222 1 333333333 4 0 4 5 1 0 0 22 2 5 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 88 9999 1 66 4 0 1 0 999 66 22222 9 1 99 00 0 99999999999999999999999999 4 111111 11111 66 222222 3 1 3 88
lowQualScore : .... . .. . .... . . . ................... . ...... . ........... . .. ...... . .............................................................. . . .... . ... .. . . . . . . . . . .... .. . . . . . . . . . . . . . .. . . . .. ................ . ....... .......... . . . .................. .. . . . . . . . . . . . . . . . . ................. . ......... . . . . . . . .. . . ..................................................................................................... .. .... . .. . . . . ... .. ..... . . .. .. . .......................... . ...... ..... .. ...... . . . ..
lowQualScore : 8888 2 22 0 0000 8 8 6 0000000000000000000 8 000000 8 88888888888 0 88 666666 8 22222222222222222222222222222222222222222222222222222222222222 2 2 2222 5 555 88 0 8 0 0 5 8 2 0 5 5555 00 0 0 7 7 4 4 0 4 4 7 7 6 3 11 4 7 4 55 5555555555555555 9 0000000 9999999999 2 5 3 555555555555555555 22 1 6 6 5 2 2 4 6 4 6 8 9 7 1 4 0 99999999999999999 9 333333333 1 2 0 9 1 1 1 55 8 0 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 00 4444 0 11 4 9 4 1 444 11 55555 8 0 11 55 5 55555555555555555555555555 0 555555 11111 11 888888 0 4 4 11
consensus : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGT-CGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAATA---------TAGTGTATCGCCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAATAGAGTTCGAAGCGGAGAGACTGACAATTGTACC-GAGGCG--GA-----GTACCGGAGGCGGTGACAATTGTA-C-GGGGGCGGTGGCAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAA-----CG-AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCG-TG----------------T--T--------------T---TG---TT---------AA--A-------------NA--T-----TCAG---------------ATATTGGTAC----GNTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG--AAA--CAAG-----TATAAAAATCTGAGAGAAAANATT-AATAATAATAAA----A-ANAA----T----T------TACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGT-NTTTTTCTCCCTCAAAT
Reference ( family-4736 ) : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGG-C-TAATTTTCCG-GT-CGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGGCTGAAATA---------TAGNGTATCGNCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAANAGAGTTCGAAGCGGAGAGACTGATAATT-TACC-GAGGCG--GA-AATTGTAGCGGAGGCGGTGACAATT-TA-C-GGAGGCG-TGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTNCGTGTTTGCAA-GTANATGCTCAGAAGAGACCANTGAACTATTCCGAGC-G--CACACCCATT--CTANATCGCTGCNACAACTAAGCACTTACCTGGTCCTCTAGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGATGACACGCATGACTAAATCTGCTGGTATCACAACNGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAANTCACATCATGCAAATATCCGGTCACNA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCGACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACAAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAA-----CG-AATAAAACACGATTC--------GCNATCACACGCGCGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATNACGTCAGTATGGTGTTGCATTGTAATCGCG-TG----------------T--T--------------T---TG---TT---------AA--A-------------GA--T-----TCAG---------------ATATNTGTAC----GNTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG--AAA--CAAG-----TATAAAAATCTGAGAGAAAANATT-AATAATAATAAA----A-AAAA----T----T------TACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACCAGGTAGCCAGGCCGTCGCTTTGAAGT-CTTTTTCTCCCTCAAAT
gi|1 : TACGCGCTATCAAATAATTAAAGCAAACATGGTTGATC-TAATTTTCCGAGT-CGGTAATTCGATCAGTGCAAATTGATGGGAAAGGCATGGGCGTTGTGACTGAAATACTAGTCTAGTAGTGTATCGGCAATTTGCTACTT------TGGTCAAACTATAGA-----TGAGATGCGGACATAGAAATAGAGTTAGAAGCGGAGAGACTGACAATTGTACCGGGGGCGATGACAATTGTACCGGGGGCGGTAGCAATTGTACC-GGGGGCGATGGCATTTCGAAAAGTATTCGTGTCGTCCGACTTTA----GCTTTGGGCAAATACAGC---AGAATCTTTCAAATGTCCTGTGCGTGTTTACAATGTAGATGCTCGGAAGAGACCACTGACCTATTCCGAGC-C--GACACACACTTACTATATCGCAGCTACAATTAAGCACTTACTTCGTCCTCTGGATCAATGGTTTG-TGAAAAATGCCTTACGGATGAACAAGCTCCAATCTATGACGACACACATGACTAA----------ATCACAACAAATAAGACATTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAATTGAATAAA-AACAATATTTCGGCAAATTCACATCATGCAAATAT-CGGTCACTT--TAAC-ATTTCCTCTGTAAATAACTACTGTCA-TATCAACGCGAAT--C----------------CAACAT-------TTTA----------CACTCAAACGACACAAATATGCTAATTCCACATGCTCCAAATGTTCACCAG--CAC-ACAT------ACTATTCACAGGTAAACTCTAACTTTTT-GACCACGGCATCACCAGCTCATGTTAACGTGACCGGTGTAATCAAAAGCATTTTACGGTGCTCA-AATTTACGGCGATACATTCAATGTAAATGTAGAACAAGTTCAAAGCAG-TCCCCGCGACAGCAACAATTTAGAAAGAAAATTC-CACTTATTGTTGACAATGACACTGACTCTCAATGCTTTG-AATAAAACACGATTC--------ACCATCACATACGCGTT-AAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTATATGACGTCAGTATGATGTTGCAGTGTAATCGCG-TG----------------T--T--------------T---TG---TTAA-------AA--A-------------AA--A-----TCAA---------------ATATATATAC----GGTTATT--ACTA-AGATATAGTGTTTTGTTGTTTGTTATTGATTTAAGG--AAA--CAAG-----CATAGAAATAAGAGAGAAAAGATT-GATAATAATAAA----A-AAAA----T----T------TACGGACT-C-TTTTTCATGCATTTATTTTAATGAATAGTAACCGAATTACAC------CCA-----AT--TCATGTTGT------TTACAATGTAGTCAGACTGTTGCTTTGAAGT-TTTTTTCTGCCTCAAAT
gi|10 : TTCG-TGAGAAATGCCGTCGGGGTAAACAAGTTCCAATCTATGATAGCAAGCATGGCTAAATCTGCTGGTATCACAGCCGACAAAAATCTGAGAAATCACAGTGACAGAAAATATTTGATTCAGAAACTGAGCAACAAACATTGTTCCTGCAAA-TCACATCATGTAAATATCCGGTCACAA--AAAC-ATATCCTCTGTTAATAACAACTGTCA-CATCAACGAAAAT--CAGCATAAAAAAAATCACAAAAT-------TTTA----------CACTCGAACAACACAAATATGCCTATTCCTTAGGCTCCAAATGTTCAGAAG---GCTGTGT------ATCATTTACAGGTTAACTCGAACTCTGT-GAACTCGACGTCGCCAGCTCTTATCGACGTGATCGGGGGAACCCAAAGCATTTT-AAGTGCTCA-AATT
gi|11 : T--C----------------CAAGAG-------TGTA----------CACTCAAACGACGTAATCATACCAATTCCACATGCCCCATATGTTAAGCAG--CGC-ACAT------A-----CACAGGTCAACTCGCAATATAC-AGTCACAGCATCGTCAGCTCATGTCGACGT-------------CAAAACATTTT-CGGTACTTACAATT
gi|11 : cagcacaaagtaagtCATATCAACCATTCAGAAAGATAATTT-GACTCAT------------CACTGACTCTCAA----------TAGTACACAATTT--------TCTATCATACATGTGTTTAAAAATTGAATTTTACGAC-TATGACGTAC-ATGTGGGTACCGTATTACGTAAGTATGGTGTTGTATTGTTATCGCG-TG----------------T--TTTTAC---------T---TG---TTTATATTTTGAATTA-------------TG--T-----TCAG---------------ACATTGTTAC----GTTTACT--GCTT-AAACATAaaatgtcaaacatatcaaccattcagaaagataatttgactcatcactgactctcaatagtacacaattttctatcatacatgtgtttaaaaattgaattttacgactatgacgtacatgtgggtaccgtattacgtaagtatggtgttgtattgttatcgcgtgtttttacttgtttatattttgaattatgttcagacattgttacgtttactgcttaaacataa
gi|12 : cagcacaaagtaagttccaagagtgtacactcaaacgacgtaatcataccaattccacatgccccatatgttaagcagcgcacatacacaggtcaactcgcaatatacagtcacagcatcgtcagctcatgtcgacgtcaaaacattttcggtacttacaattaaatgtcaaa--T-----TCAG---------------ATATTTGTAC----AATTATT--TCTA-AAATATAGTCTTTTGATGTTGGTTATGGATTTAAA-----------------TATAATAATCTGTGAa
gi|12 : gtgtgtttttccattgttatcacgtgttttggatctaactgttttttgttttttttgtttttaattattA----C----T------TACGAACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACTGAAGTACAC------CTA-----CT--TTATGTTAT------TTAATAGGTAGCCTGGTC-----------AT-CTTTTTCTCCCTCAAActtacgaactactttttgttgcatttgtttcaatgaatggtaactgaagtacacctactttatgttatttaataggtagcctggtcatctttttctccctcaaa
gi|13 : gtgtgtttttccattgttatcacgtgttttggatctaactgttttttgttttttttgtttttaattattttcagatatttgtacaattatttctaaaatatagtcttttgatgttggttatggatttaaatataataatctgtgAATTC----AGTGCAAATATTTGGAAATGCCAT---CGTATCGACTGAAAT-------------------------TCGCTATTT------TGGTCAAACTA---------TGTGATACGGACAT-GAAAT----TT--------AGAAATTGAGAGTT-T----GAAGCG--AA-----------GAGAC--TGACAATTGTA-TAGGAGGCGGTGATAATCCGAAAAATGTTAGTCTCGTCCGACCTTAGCCGGCTTTGGAAAAATACAGT---AGATTCTTT-AAATGCCCGGTCCGTGTTTGCA
gi|14 : aaaGCTGTCAAAAAATCAAAACAAACATGGTTG----TAA--------GT-CAGTAATTC----AGTGCAAATTG-----AAAGGCATGGGCATTG-------AA-A---------TAGTGAATTGCCGATTCGCTACTT------TGGTCAAAC----AA-----TGTGATACGGACATAGATAAAGAGTTTGTAGTGGAGAGACTGATAATT-T--------------------TACCAGAGGCGTTGACAATT----------------------CGAAAAATGTTTGTCTCATCCGACCTTA----CTTTTGGGCAA
gi|15 : atggTACGCGCTGTCAAAAAATCAAAACAAACATGGCTAA-CATAATTTTCCG-TTTCAGTAATTC----AGTGTTAATTGCTGGGAAAGGCCTGTGCGTTGTGACTAAA--A---------TAGAGTATCGTGGATTTGCTATTTTTTATATGGTCAAACT----A-----TGTGATATGGACATTGAAAGAGAGTTCGATTAGGAGAGACTGGTTATTGCACCTGAGGC
gi|16 : AA--CAAG-----TA-AAAAATCTGCGAGAAATTATT-AATAA-AATAAA----A-TTCC----T----T------TACGGACTAC-TTTTTGTTGCAATTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCTGGCCGTCGCTTTGGGGT-ATGTTTCTCCCTCAAATtg
gi|17 : AAA----T-AAAA----T----TCCTTTGTACAAAGTTC-GTTTTGTTGCATTTGTTTCAATGAACTGTAACCGAAGAACAC------CTA-----CT--TCATGTTGA------TTACCAGGTAGCCTGGCCGTTGCTTTGAAGT-CATTGTCATCCTCAAATg
gi|18 : ttgCTGTAAAAAACTCAAAACAAACATGGTTGG-CCTAATTTTCCAAGT-CGGTAATTC----AGTGCAAATTGGTGGGAAAGGCATGGGCGTTGTGGCTGA-------------------ATCTCCGATTCGCAAC
gi|19 : GAGAGAAAAGATT-AATA-TATTAAATTCC----------T----T------TATGGACTAA-TTTTTGTTGCATTTGTTTCAATCAATGGTAA-----------------------------TCA---TGT------TTACCACGTAGCCAGGCCATCGCTTTG
gi|2 : AAATACAGCTGCAGATTCTTTCAAATGTCCTGTGCGTGTTTGAAAAGTACATGCTCAGAAGAACCCATTGAACTATTCTGAGCCGT-CACACCCATT--TTATATCGCTGCAGCAACTAA-------CCCGGTCCTCTAGAGCAGTGGTCCG-TGAGAAATCTTGTCGGGGTAAAAAAGCTCAAATCTATGATGACTTGCATGACAAAATCTACTGGTATCACAACAGACACGACATTGACAAACCACAGTGGTAGAAAAGATTTGCTTTAAAACCTGAACGAC-AACAATGTTCCTG-----TCA-ATCATACAAATATCCGGTCACAA--AAAC-ACAGCATCAACGA-TAA------TCAGCATAAA--ACAATTTC----------------TAAAAT-------TTTA----------CGCTCGAACAACACAAATTTGCCAATTTCCCATGTTCTAAATGTTCAGCAGTACGC-ATATTATTCAATTATTCAAAGGTCAACTCGAATTCTAT-GAACACGGCCTCGTCAGCTCATGTGGAAGTGACCGGCGGAATACAAAGCATTTT-CGGTTCTCA-AATTCATGGAGGTACATTCAATGTACATGTAAATCAAGTCAAAACCAGTTATCCACCACAGCAACCAATTAGAAAGAGAATAC-GACTCACTGTTGACAGTGACACTGAC-----G-----TGAAACAAAATACGAATC--------GCAATCACACGCGTTTTTAAATATCGAAGATCGCAGCATATAA--TCTGACAGAGGTACTGCATCACGTTAGTATGGTGTTGCGTTAAAATCGCG-TG----------------TAATAGATCTAACTGTTAT---TG---TTTTC------AATTA-------------TT--T-----TCAT---------------ATATTGGCAC----ACTTATT--GCTT-GCATAAAGTGTTTTGTTGCTGGTTATTAGTTTAAAGA-AAA--CAAG-----TATAAAAATCAGGGAGAAAATACT-AATAA-AATAAA----A-TTCC----T----T------T-TGAACTAC-TTTTTGTTGCTAATGATTCAATGAATGTTAACCGAATTACAC------CT
gi|20 : TACTAAGAAGCTAG-CCGTTGCTTTGAAGT-ATTTTAATCCCTCAAGT
gi|3 : CAATGTATATGCTCAGAAGAGACCTAAGAACTATTCCGAGC-AGACATACCCATT--CTAATTCGCTGGTACAACCCAGCCCTTAACTGGTTCCCTGGATCAATA--TC-------AA----------GTATACTAGCTCCAATATATGAACACATGCAT-ACTATATCTGCAGGTACTACAACAGACAAGAAACTGACAAACTACATTGCCAGAAAATATTTGCTTCGAAAATTAAATGAC-AACAATGTT---GCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCGCCTGTGAATAATTACTGTCA-CATCAACGAGAAT--C----------------CAACAT-------TTTA----------CACTCAAACAACACAAAT--------TCCACATGCTCCAAATGTTCAGCAG--CAT-ACAT------ATTATTCACAAGTCAACTCAAACTCTAT-GAACACGGCATCAACAGTTCATGTCAACGTGACCGGTGTAATCCAAATCATTTT-TGGTGCTTA-AATTCACGGAGGTACATTCAATG---AT---AACCAGGTTTAAGGCAGCTCCCCGCCACAGCAGCAAATTAGAAAGACATTTC-GACTC-------------ACACTGACACTCAA-----C-----AAAACACAATTC--------ACAAACACACGCGTGTTAAAACATTGAAGGTAGCGGTATATGAACTATGACATAGGTACTGTATGACGTCAGTATGGTGTTGCATTTTAATCGCG-TG----------------T--T--------------T---TGAATCT---------AA--CTGTTGTTTTTTTTAA--TTTTTTTCTG---------------ATATCGGTAC----GCTTATT--GCTA-AAATATAGTGTTTTATTGTTGGTTATTGATTTAAAGAAAAA--GAAG-----TTAAAAAATCTGAGAGAAAAAATT------TAAAAAA----T-GAAATTCTT----T------TACGGACTACTTTTTTGTTTCATTTGTTTCAATGAATGGTAACCGAGTTACACCTTAGGCTA-----CT--GTATGTTGT------TTACTAGGTAGCCAGGATGTCGCTTTGCAGT-CTTTTTCTCCCTCAAATtag
gi|4 : CAACTAAGCATTTACCTGGCCCTCTGTATCAATGGTTCG-TAAGAAATGCCGTCGGGGTAAACTAGCTCCAGTTGATGACGACACGCATGACTTAATCTGCTGGTATCACAACAGACTGGAAACTGACAAACCTCAGTGCCAGAAAATATTTGCTTCAGAAATTCA------AACATTATTCCTGCAAAATCACATCATGCAAATATCCGGTCACTAACAAATAATATCCTCTGTGAATATCTGCTGTCA-CATCAACGAGAAT--C----------------CAA----------TTTA----------TACTCAATCAATACAATCGTGCCAATTCCATATGCACAAAATGTTTAGCAG--CAC-A------------------AG------------TCTAT-GAACACGGCGTTGCCAGTTCATGTCAACGTTACCTGTGTAATCAAAAGCATGTT-CGGTGTTTA-AATTCACGGAGGTACATTCAATGTACATGTA----AAGTTAAAAGCAGCTCCCCGCCACATTAG-GAGTTGAAAAGATAATTC-CA-TCCTTGTTTACCGTGACACTGACTCT--A-----T---ATAAAACACGATTC--------ACCACCACACGCGTGTTGAAACATTGTAGATCGCAGCATATGAACTATGAATTTGGTTCTTTATGACGTCAGTGTGGTGCTGCATTTTAATCACC-TG----------------T--T--------------TAGGTT---CT---------AA--AT------------GA--T-----TTTGTTTTAATTTATTTTCATATCGGTAT----TGTTATT--GCTATATATATAGTGTTTTTATGATGTTT-TTTATTTAAA---AAA--CAAG-----TA-AAAAA-CTAAGAGAAAAGATTCAATGA-AATAAA----ATAAAACTCCT----T------TACGGACTAC-TTTTTGTTTCATTCGTTCCAATGAATTGTAACCGAATTACAC------CTAATAACCTAATCGTAATGT------TGACTAGGTAGTCAGGCCGTCGCTTTGAAGA-ATTTTTCTCTCTCAAAT
gi|5 : cg--CACAACCAGT--CTATATGACTGCAACAACTTAATACATATTTGGTCGTATAGATCAGTAGTTTG-TAAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATAATGCTATGCATGACTAACTCTGCTGGTATC-----TGACAAGAAACTGACAAACCA--GTGCCCAAACATATTTGATTCAGAAACTGAA-GAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGGTCAC-A--AAAC-TTGTCCTCTGTGAATAACTAATGTCG-CATCAACGAGAAT--CAGCATACAGAAATTT-CAAAAG-------TTTA----------CACTCGAACAAAACAAATAAGCCAATTCCCCATGCTCAAAATGTTC-GCAA----------------GTTATTCACAGGTCAACTCA-----TATAGAGCATGGAATCGTCATCTCATGTCAACGTGATCGGTGGAATCCAGAGCATTTT-CGGTGCTCA-GACTCATAAAGGTACATTTAATGTACAAGTTAATCAAACCAAAAACAGTTCCCCGCGAAAACAACCAATTAGTAAGAGAATTC-GACTCATTATTGACAGTGACA--GACTTTCAA-----CA-AA------------------------ATGAAACGTGTGTTAAAATGTTGAAGGTCGCCGCAAATGAACTATG----------------ACGTCAGTATGATTTTGCATTGTAATTGCG-TGTAATGGATCTGACTGTT--T--------------T---TGTT-TT---------AA--AC------------CATTT-----TCAG---------------ATATTGGTAC----GCGAATA--GCTA-ACATATAATGTTTTGTTGTTGGTTATTGATTTAAAGC-AAA--GAAG-----TAAAAAAATCTGAGAGAAATTATT-GAGA-----AAA----A-ATAA----TTCCAT------TACGGACTAC-TTTTTGTTGTAATTGTTT
gi|5 : gt------CTA-----CT--TTTTGTTGTAATTGTTTACCAGGTAGCCTGGACGTCGTTTTGAAGTATTTTTTATCCCTCAAATaccaggtagcctggacgtcgttttgaagtattttttatccctcaaatg
gi|6 : gtcacaaccagtctatatgactgcaacaacttaatacatatttggtcgtatagatcagtagtttgtaagaaatgccgtcggggtaaacaagctccaatctataatgctatgcatgactaactctgctggtatctgacaagaaactgacaaaccagtgcccaaacatatttgattcagaaactgaagacaacaatgttcctgcaaatcacatcatgcaaatatccggtcacaaaacttgtcctctgtgaataactaatgtcgcatcaacgagaatcagcatacagaaatttcaaaagtttacactcgaacaaaacaaataagccaattccccatgctcaaaatgttcgcaagttattcacaggtcaactcatatagagcatggaatcgtcatctcatgtcaacgtgatcggtggaatccagagcattttcggtgctcagactcataaaggtacatttaatgtacaagttaatcaaaccaaaaacagttccccgcgaaaacaaccaattagtaagagaattcgactcattattgacagtgacagactttcaacaaaatgaaacgtgtgttaaaatgttgaaggtcgccgcaaatgaactatgacgtcagtatgattttgcattgtaattgcgtgtaatggatctgactgtttttgttttaaaccattttcagatattggtacgcgaatagctaacatataatgttttgttgttggttattgatttaaagcaaagaagtaaaaaaatctgagagaaattattgagaaaaaataattccattacggaACTAGAAACTGACAAACCACAGTGCCAGAGAATATTTGATTCAGAAACCGAACGAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGTTCACAA--AAAT-ATATCCTCTGTAAATAACTACTGTCA-TATCAACATGAA---C----------------CAGCATAAAGAAATTTATAAAAGTTAACATTTACAAAACAAAAATATGCTGATTCCGCATAATTCAAATGCTTA----------------------------CAGGTCAACTCGAAGTCTTT-AAACACGGCACAGTCAACT---ATCAACGTCATCGGTG--A---AAAGTAGGTT-CGGTGCTGA-AATCCATGGAAATACATT-AGTATAAAAGTAAACAAAGTTAAAAGCATTTCGCTGCTACGTCAACCAACTA-ATAGAGAATTAAGACCCATTGTTGACAGTGACACTGACT---AG-----CG-A-TAAAACACGATTCCCGTACATACGCTCGTACGTGTGTTTAAACATTGAATACCGCGGCATATGAACTATGCCGAATGTACAGTATGACATCAGTTTGGTTTAACGTTGTAATCTCACTG----------------T--T--------------T---T-------------------------------------------TCAG---------------ATATTGGTTC----GCTAATT--GATA-AATTATAGTGATTT-TTGTTGGTTATTGATTTGAAG--AAAAACAAAATTGATATAAAA-TATGAGAGAAAATATT-TATAACATTAAA----T-GCT-----T----T------TACGGACCG----TTTGTTACCTTTGTTTTAATAAATGGTAACCGAATTGCAC------CTA-----CT--TTATGTTAT------TTACAAGGTAGCCAGGCCGTCGCTTTG-ATT-TTTTTTCTCCTTCAAATg
gi|7 : GATTCGCTACTT------TGGTTAA-TTA--AAAACATTGTGATACAGACACAGGAATAGAGTTTGAAGCGGAGAGACTAACAATT---------------------GTAGCGGAGGCGGTGA----------------------CAATCCGAAAAATATTCGTCTTGTCTGACCTTA----GCTTT-GGCAAATATAAC---AGATTCTTTC-AATGTCCTGTACGTGTTTAC-G-GTAGAT-----------ACCACTGAATTATTCCGA------CACGCTCATT--CGAAATCACTGCTACAACTAAATACTTACCTGATCCTCTAGATCGATGGTTCGATGAgt
gi|7 : GATGGTTCG-ATGACTAAATCTTTTGGTATCATAACGGACAAGAAACTGACAAACCACAGTGCCAGGAAATATTTGCTTCAGAAATTGAATGAC-AA----------ACAAAATCAACTCATGCAAATTACCGGTTACTA--AAAC-ATGTCCTATGAGAATAATTACTGTCA-CATCAACGAGATT--C----------------TAACAT-------TTTA----------GACTCAAACGACACACAAATGCCAATTACACATGCTCCAAATGCTCAGCAG--CAC-ACAA------ACTATTCACAGATCAA-----A-TCTA-----------ATCGCCGGCTCATGTCAACGTGACCTG-GTAATTCAAATCATTTT-CGGTGCTGA-AATTCACAAAGGTACATTTTATAT-CGTATAAACCAAGTTAAAATCAGCTCCCCGCCACAGCAACAAATTAGAA----AATTC-GACTCATTGTTGACAGTGGCActaaatcttttggtatcataacggacaagaaactgacaaaccacagtgccaggaaatatttgcttcagaaattgaatgacaaacaaaatcaactcatgcaaattaccggttactaaaacatgtcctatgagaataattactgtcacatcaacgagattctaacattttagactcaaacgacacacaaatgccaattacacatgctccaaatgctcagcagcacacaaactattcacagatcaaatctaatcgccggctcatgtcaacgtgacctggtaattcaaatcattttcggtgctgaaattcacaaaggtacattttatatcgtataaaccaagttaaaatcagctccccgccacagcaacaaattagaaaattcgactcattgttgacagtggca
gi|8 : gattcgctactttggttaattaaaaacattgtgatacagacacaggaatagagtttgaagcggagagactaacaattgtagcggaggcggtgacaatccgaaaaatattcgtcttgtctgaccttagctttggcaaatataacagattctttcaatgtcctgtacgtgtttacggtagataccactgaattattccgacacgctcattcgaaatcactgctacaactaaatacttacctgatcctctagatcGACAAGAAACTGGCAAACCACAGTACCAGAAAATATTTGCTTCAAAAATTGAATTAC-AACAATGTT---ACAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-AT--CCTATGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAAAAT-------TTTA----------CACTCGAACAACATAACTTTGCCAATTC--------------GTTCAGTAG--TGC-ACAT------ATTATTCACAGTTCAAATCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAATGTGACCAGTGTAATCCAAAGCATTTT-CTGTGCTTA-AATTCACAGAGGTACATTCAATGTGCATAAAAACCAAGTTAAAAGCAGCTCGCCGCCACAGCAACAAATTAAAAAGAAATTTC-GACACAATGTTGACAGTTACACTGATGCTC----------AATAACACATGATTC--------ACAA
gi|9 : ----------CACTCAAACAACACATACATGCCAATTCTACATGCTCCAAATGTGCCGCAG--CAC-AC----------TATTCACAGATCATCTCAAACTCTAT-AAACACGGCATCGCCAGCTCATATCAACGTGAATTTTGTAAATCAAAGCATTTT-TGGTGCTCA-ACTTCATGGAAGTACATTCAAT-TACATGTAAATCAAGTTAAAAGCAGTTCCCCACCGCAGCAACAAATAAGAAAGATAATTT-CACTCATTGTTGACAGTGACAC-GACCCTC----------AATAAAACAC-AT----------------------GTGTTAAAACATTGAAGATCGTGGTATATGAACTATGACATAGGTACTGTATTAAGTC----TGGTGTTGCATTGTAATCGCA-TG----------------T--T--------------T---TG--------------------------------GA--T-----GTAA---------------CTTTTTTTGTTTTGAATTATTAAATTA-AAAAATAGTGTTTTGTT--------TTGATTTAAAG--AAA--atgtatgagaaggctatatgtcacatatgtatgggaaggctatatgtcacatatatatgggaaggctatatgtcacatatatatgaaaaaataaaacatttacatattagtaaaatatgtacatgtttatgt
Alignments
lowQualScore : 1111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 3333 1111 77777777777777777 222222 44444444444 333333 0000000000000000000000000000 22 222222 2222 111 3333 11 5555555555555555 1111111 1111111111 222222222222222222 44444444444444444 111111111 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 11 11111 1111 3333333333333333333333 111111 11111 111111
lowQualScore : 3333 3 33 7777 8 3 0 00000000000000000 3 333333 0 11111111111 6 7777 888888 0 77 2222222222222222222222222222 33 2 777777 0 5555 0 0 1111 2 777 55 0 66 1 2 4 0 0 2 5555 11 1 1 3 5 2 2 1 5 4 5 1 7 5 66 4 2 4 55 1111111111111111 4 3333333 5555555555 0 1 1 777777777777777777 33 5 3 0 1 4 1 3 0 3 0 0 2 1 2 4 22222222222222222 1 777777777 4 0 5 1 0 22 4 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 66 99999 55 66 4 0 7 2 2 3 66 66 22222 9 0 1 44 7777 6666666666666666666666 4 111111 11111 66 222222 0 1 3 2 4
lowQualScore : .... . .. .... . . . ................. . ...... . ........... . .... ...... . .. ............................ .. . ...... . .... . . .... . ... .. . .. . . . . . . .... .. . . . . . . . . . . . . . .. . . . .. ................ . ....... .......... . . . .................. .. . . . . . . . . . . . . . . . ................. . ......... . . . . . .. . ........................................................................................... .. ..... .. .. . . . . . . .. .. ..... . . . .. .... ...................... . ...... ..... .. ...... . . . . .
lowQualScore : 2222 2 88 0000 8 8 8 44444444444444444 2 000000 8 88888888888 0 4444 000000 8 44 6666666666666666666666666666 88 5 000000 2 0000 2 2 2222 5 555 88 2 88 0 5 2 2 2 5 5555 00 4 4 7 7 2 2 4 4 4 7 7 4 1 11 4 7 4 55 5555555555555555 9 0000000 9999999999 2 5 3 555555555555555555 22 1 6 5 2 2 4 6 4 6 8 9 7 0 4 0 99999999999999999 9 000000000 1 2 9 1 1 55 4 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 11 66666 44 11 4 9 6 4 5 1 99 11 55555 8 1 0 66 7777 2222222222222222222222 0 555555 11111 11 888888 7 4 4 6 4
consensus : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAATA---------TAGTGTATCGCCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAATAGAGTT-GAAG-GGAGAGACTGATAATTGTACC-GAGGCG--GA-----GTACCGGAGGCG-TGACAATTGTA-CGGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAA-----CG-AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCG-TG----------------T--T--------------T---TG-------------------TT---------AA--A------------TN--TT--CA----GATATTGGTACG-NTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG--AAA--CAAG-----TATAAAAATCTGAGAGAAAATATT-AATAA-AATAAAA-NTNA----T----T------TACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
Reference ( family-4736 ) : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAATA---------TAGTGTATCGCCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAATAGAGTTCGAAGCGGAGAGACTGACAATTGTACC-GAGGCG--GA-----GTACCGGAGGCGGTGACAATTGTA-CGGG-GGCGGTGGCAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAA-----CG-AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCG-TG----------------T--T--------------T---TG-------------------TT---------AA--A------------NA--TT--CA----GATATTGGTACG-NTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG--AAA--CAAG-----TATAAAAATCTGAGAGAAAANATT-AATAATAATAAAA-ANAA----T----T------TACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
gi|1 : TACGCGCTATCAAATAATTAAAGCAAACATGGTTGATC-TAATTTTCCGAGTCGGTAATTCGATCAGTGCAAATTGATGGGAAAGGCATGGGCGTTGTGACTGAAATACTAGTCTAGTAGTGTATCGGCAATTTGCTACTT------TGGTCAAACTATAGA-----TGAGATGCGGACATAGAAATAGAGTTAGAAGCGGAGAGACTGACAATTGTACCGGGGGCGATGACAATTGTACCGGGGGCGGTAGCAATTGTACCGGG-GGCGATGGCATTTCGAAAAGTATTCGTGTCGTCCGACTTTA----GCTTTGGGCAAATACAGC---AGAATCTTTCAAATGTCCTGTGCGTGTTTACAATGTAGATGCTCGGAAGAGACCACTGACCTATTCCGAGC-C--GACACACACTTACTATATCGCAGCTACAATTAAGCACTTACTTCGTCCTCTGGATCAATGGTTTG-TGAAAAATGCCTTACGGATGAACAAGCTCCAATCTATGACGACACACATGACTAA----------ATCACAACAAATAAGACATTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAATTGAATAAA-AACAATATTTCGGCAAATTCACATCATGCAAATAT-CGGTCACTT--TAAC-ATTTCCTCTGTAAATAACTACTGTCA-TATCAACGCGAAT--C----------------CAACAT-------TTTA----------CACTCAAACGACACAAATATGCTAATTCCACATGCTCCAAATGTTCACCAG--CAC-ACAT------ACTATTCACAGGTAAACTCTAACTTTTT-GACCACGGCATCACCAGCTCATGTTAACGTGACCGGTGTAATCAAAAGCATTTTACGGTGCTCA-AATTTACGGCGATACATTCAATGTAAATGTAGAACAAGTTCAAAGCAG-TCCCCGCGACAGCAACAATTTAGAAAGAAAATTC-CACTTATTGTTGACAATGACACTGACTCTCAATGCTTTG-AATAAAACACGATTC--------ACCATCACATACGCGTT-AAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTATATGACGTCAGTATGATGTTGCAGTGTAATCGCG-TG----------------T--T--------------T---TG-------------------TTAA-------AA--A------------AA--AT--CA----AATATATATACG-GTTATT--ACTA-AGATATAGTGTTTTGTTGTTTGTTATTGATTTAAGG--AAA--CAAG-----CATAGAAATAAGAGAGAAAAGATT-GATAATAATAAAA-AAAA----T----T------TACGGACT-C-TTTTTCATGCATTTATTTTAATGAATAGTAACCGAATTACAC------CCA-----AT--TCATGTTGT------TTACAATGTAGTCAGACTGTTGCTTTGAAGTTTTTTTC-TGCCTCAAAT
gi|10 : TTCG-TGAGAAATGCCGTCGGGGTAAACAAGTTCCAATCTATGATAGCAAGCATGGCTAAATCTGCTGGTATCACAGCCGACAAAAATCTGAGAAATCACAGTGACAGAAAATATTTGATTCAGAAACTGAGCAACAAACATTGTTCCTGC-AAATCACATCATGTAAATATCCGGTCACAA--AAAC-ATATCCTCTGTTAATAACAACTGTCA-CATCAACGAAAAT--CAGCATAAAAAAAATCACAAAAT-------TTTA----------CACTCGAACAACACAAATATGCCTATTCCTTAGGCTCCAAATGTTCAGAAG---GCTGTGT------ATCATTTACAGGTTAACTCGAACTCTGT-GAACTCGACGTCGCCAGCTCTTATCGACGTGATCGGGGGAACCCAAAGCATTTT-AAGTGCTCA-AATT
gi|11 : T--C----------------CAAGAG-------TGTA----------CACTCAAACGACGTAATCATACCAATTCCACATGCCCCATATGTTAAGCAG--CGC-ACAT------A-----CACAGGTCAACTCGCAATATAC-AGTCACAGCATCGTCAGCTCATGTCGACGT-------------CAAAACATTTT-CGGTACTTACAATT
gi|11 : cagcacaaagtaagtCATATCAACCATTCAGAAAGATAATTT-GACTCAT------------CACTGACTCTCAA----------TAGTACACAATTT--------TCTATCATACATGTGTTTAAAAATTGAATTTTACGAC-TATGACGTAC-ATGTGGGTACCGTATTACGTAAGTATGGTGTTGTATTGTTATCGCG-TG----------------T--TTTTAC---------T---TG-------------------TTTATATTTTGAATTA------------TG--TT--CA----GACATTGTTACG-TTTACT--GCTT-AAACATAaaatgtcaaacatatcaaccattcagaaagataatttgactcatcactgactctcaatagtacacaattttctatcatacatgtgtttaaaaattgaattttacgactatgacgtacatgtgggtaccgtattacgtaagtatggtgttgtattgttatcgcgtgtttttacttgtttatattttgaattatgttcagacattgttacgtttactgcttaaacataa
gi|12 : cagcacaaagtaagttccaagagtgtacactcaaacgacgtaatcataccaattccacatgccccatatgttaagcagcgcacatacacaggtcaactcgcaatatacagtcacagcatcgtcagctcatgtcgacgtcaaaacattttcggtacttacaattaaatgtcaaa-TG----------------T--T--------------T---T---------------------T---------AA--T------------TA--TTTTCA----GATATTTGTACA-ATTATT--TCTA-AAATATA--GTCTT-TTGATG----TTGGTT----------------------ATGGA--TTT------AAATAT--AATAATC-TG-----TGA----C----T------TACGAACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACTGAAGTACAC------CTA-----CT--TTATGTTAT------TTAATAGGTAGCCTGGTCATC-----------TTTTTC-TCCCTCAAAa
gi|13 : gtgtgtttttccattgttatcacgtgttttggatctaactgttttttgtttttttAATTC----AGTGCAAATATTTGGAAATGCCAT---CGTATCGACTGAAAT-------------------------TCGCTATTT------TGGTCAAACTA---------TGTGATACGGACAT-GAAAT----TT--------AGAAATTGAGAGTT----T-GAAGCG--AA-----G------AGAC--TGACAATTGTA-TAGGAGGCGGTGATAATCCGAAAAATGTTAGTCTCGTCCGACCTTAGCCGGCTTTGGAAAAATACAGT---AGATTCTTT-AAATGCCCGGTCCGTGTTTGCA
gi|14 : aaaGCTGTCAAAAAATCAAAACAAACATGGTTG----TAA--------GTCAGTAATTC----AGTGCAAATTG-----AAAGGCATGGGCATTG-------AA-A---------TAGTGAATTGCCGATTCGCTACTT------TGGTCAAAC----AA-----TGTGATACGGACATAGATAAAGAGTTTGTAGTGGAGAGACTGATAATT-T--------------------TACCAGAGGCGTTGACAATT----------------------CGAAAAATGTTTGTCTCATCCGACCTTA----CTTTTGGGCAA
gi|15 : atggTACGCGCTGTCAAAAAATCAAAACAAACATGGCTAA-CATAATTTTCCGTTTCAGTAATTC----AGTGTTAATTGCTGGGAAAGGCCTGTGCGTTGTGACTAAAATA---------GA--GTATCGTGGATTTGCTATTTTTTATATGGTCAAACT----A-----TGTGATATGGACATTGAAAGAGAGTTCGATTAGGAGAGACTGGTTATTGCACCTGAGGC
gi|16 : AA--CAAG-----TA-AAAAATCTGCGAGAAATTATT-AATAA-AATAAAA-TTCC----T----T------TACGGACTAC-TTTTTGTTGCAATTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCTGGCCGTCGCTTTGGGGTATGTTTC-TCCCTCAAATtg
gi|17 : AAAT-AAAA----T----TCCTTTGTACAAAGTTC-GTTTTGTTGCATTTGTTTCAATGAACTGTAACCGAAGAACAC------CTA-----CT--TCATGTTGA------TTACCAGGTAGCCTGGCCGTTGCTTTGAAGTCATTGTC-ATCCTCAAATg
gi|18 : ttgCTGTAAAAAACTCAAAACAAACATGGTTGG-CCTAATTTTCCAAGTCGGTAATTC----AGTGCAAATTGGTGGGAAAGGCATGGGCGTTGTGGCTGA-------------------ATCTCCGATTCGCAAC
gi|19 : GAGAGAAAAGATT-AATA-TATTAAAT--TCC----T----T------TATGGACTAA-TTTTTGTTGCATTTGTTTCAATCAATGGTAA-----------------------------TCA---TGT------TTACCACGTAGCCAGGCCATCGCTTTG
gi|2 : AAATACAGCTGCAGATTCTTTCAAATGTCCTGTGCGTGTTTGAAAAGTACATGCTCAGAAGAACCCATTGAACTATTCTGAGCCGT-CACACCCATT--TTATATCGCTGCAGCAACTAA-------CCCGGTCCTCTAGAGCAGTGGTCCG-TGAGAAATCTTGTCGGGGTAAAAAAGCTCAAATCTATGATGACTTGCATGACAAAATCTACTGGTATCACAACAGACACGACATTGACAAACCACAGTGGTAGAAAAGATTTGCTTTAAAACCTGAACGAC-AACAATGTTCCTG-----TCA-ATCATACAAATATCCGGTCACAA--AAAC-ACAGCATCAACGA-TAA------TCAGCATAAA--ACAATTTC----------------TAAAAT-------TTTA----------CGCTCGAACAACACAAATTTGCCAATTTCCCATGTTCTAAATGTTCAGCAGTACGC-ATATTATTCAATTATTCAAAGGTCAACTCGAATTCTAT-GAACACGGCCTCGTCAGCTCATGTGGAAGTGACCGGCGGAATACAAAGCATTTT-CGGTTCTCA-AATTCATGGAGGTACATTCAATGTACATGTAAATCAAGTCAAAACCAGTTATCCACCACAGCAACCAATTAGAAAGAGAATAC-GACTCACTGTTGACAGTGACACTGAC-----G-----TGAAACAAAATACGAATC--------GCAATCACACGCGTTTTTAAATATCGAAGATCGCAGCATATAA--TCTGACAGAGGTACTGCATCACGTTAGTATGGTGTTGCGTTAAAATCGCG-TG----------------TAATAGATCTAACTGTTAT---TG-------------------TTTTC------AATTA------------TT--TT--CA----TATATTGGCACA-CTTATT--GCTT-GCATAAAGTGTTTTGTTGCTGGTTATTAGTTTAAAGA-AAA--CAAG-----TATAAAAATCAGGGAGAAAATACT-AATAA-AATAAAA-TTCC----T----T------T-TGAACTAC-TTTTTGTTGCTAATGATTCAATGAATGTTAACCGAATTACAC------CT
gi|20 : TACTAAGAAGCTAG-CCGTTGCTTTGAAGTATTTTAA-TCCCTCAAGT
gi|3 : CAATGTATATGCTCAGAAGAGACCTAAGAACTATTCCGAGC-AGACATACCCATT--CTAATTCGCTGGTACAACCCAGCCCTTAACTGGTTCCCTGGATCAATA--TC-------AA----------GTATACTAGCTCCAATATATGAACACATGCAT-ACTATATCTGCAGGTACTACAACAGACAAGAAACTGACAAACTACATTGCCAGAAAATATTTGCTTCGAAAATTAAATGAC-AACAATGTT---GCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCGCCTGTGAATAATTACTGTCA-CATCAACGAGAAT--C----------------CAACAT-------TTTA----------CACTCAAACAACACAAAT--------TCCACATGCTCCAAATGTTCAGCAG--CAT-ACAT------ATTATTCACAAGTCAACTCAAACTCTAT-GAACACGGCATCAACAGTTCATGTCAACGTGACCGGTGTAATCCAAATCATTTT-TGGTGCTTA-AATTCACGGAGGTACATTCAATG---AT---AACCAGGTTTAAGGCAGCTCCCCGCCACAGCAGCAAATTAGAAAGACATTTC-GACTC-------------ACACTGACACTCAA-----C-----AAAACACAATTC--------ACAAACACACGCGTGTTAAAACATTGAAGGTAGCGGTATATGAACTATGACATAGGTACTGTATGACGTCAGTATGGTGTTGCATTTTAATCGCG-TG----------------T--T--------------T---TGAATCTAACTGTTGTTTTTTTT---------AATTT------------TT--TT--CT----GATATCGGTACG-CTTATT--GCTA-AAATATAGTGTTTTATTGTTGGTTATTGATTTAAAGAAAAA--GAAG-----TTAAAAAATCTGAGAGAAAAAATT-TA-AAAAATGAAA-TTCT----T----T------TACGGACTACTTTTTTGTTTCATTTGTTTCAATGAATGGTAACCGAGTTACACCTTAGGCTA-----CT--GTATGTTGT------TTACTAGGTAGCCAGGATGTCGCTTTGCAGTCTTTTTC-TCCCTCAAATtag
gi|4 : CAACTAAGCATTTACCTGGCCCTCTGTATCAATGGTTCG-TAAGAAATGCCGTCGGGGTAAACTAGCTCCAGTTGATGACGACACGCATGACTTAATCTGCTGGTATCACAACAGACTGGAAACTGACAAACCTCAGTGCCAGAAAATATTTGCTTCAGAAATTCA------AACATTATTCCTGCAAAATCACATCATGCAAATATCCGGTCACTAACAAATAATATCCTCTGTGAATATCTGCTGTCA-CATCAACGAGAAT--C----------------CAA----------TTTA----------TACTCAATCAATACAATCGTGCCAATTCCATATGCACAAAATGTTTAGCAG--CAC-A------------------AG------------TCTAT-GAACACGGCGTTGCCAGTTCATGTCAACGTTACCTGTGTAATCAAAAGCATGTT-CGGTGTTTA-AATTCACGGAGGTACATTCAATGTACATGTA----AAGTTAAAAGCAGCTCCCCGCCACATTAG-GAGTTGAAAAGATAATTC-CA-TCCTTGTTTACCGTGACACTGACTCT--A-----T---ATAAAACACGATTC--------ACCACCACACGCGTGTTGAAACATTGTAGATCGCAGCATATGAACTATGAATTTGGTTCTTTATGACGTCAGTGTGGTGCTGCATTTTAATCACC-TG----------------T--T--------------TAGGTT-------------------CT---------AA--ATGATTTTGTTTTAA--TT--TATTTTCATATCGGTATT-GTTATT--GCTATATATATAGTGTTTTTATGATGTTT-TTTATTTAAA---AAA--CAAG-----TA-AAAAA-CTAAGAGAAAAGATTCAATGA-AATAAAATAAAACTCCT----T------TACGGACTAC-TTTTTGTTTCATTCGTTCCAATGAATTGTAACCGAATTACAC------CTAATAACCTAATCGTAATGT------TGACTAGGTAGTCAGGCCGTCGCTTTGAAGAATTTTTC-TCTCTCAAAT
gi|5 : cg--CACAACCAGT--CTATATGACTGCAACAACTTAATACATATTTGGTCGTATAGATCAGTAGTTTG-TAAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATAATGCTATGCATGACTAACTCTGCTGGTATCT-----GACAAGAAACTGACAAACCA--GTGCCCAAACATATTTGATTCAGAAACTGAA-GAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGGTCAC-A--AAAC-TTGTCCTCTGTGAATAACTAATGTCG-CATCAACGAGAAT--CAGCATACAGAAATTT-CAAAAG-------TTTA----------CACTCGAACAAAACAAATAAGCCAATTCCCCATGCTCAAAATGTTC-GCAA----------------GTTATTCACAGGTCAACTCA-----TATAGAGCATGGAATCGTCATCTCATGTCAACGTGATCGGTGGAATCCAGAGCATTTT-CGGTGCTCA-GACTCATAAAGGTACATTTAATGTACAAGTTAATCAAACCAAAAACAGTTCCCCGCGAAAACAACCAATTAGTAAGAGAATTC-GACTCATTATTGACAGTGACA--GACTTTCAA-----CA-AA------------------------ATGAAACGTGTGTTAAAATGTTGAAGGTCGCCGCAAATGAAC----------------TATGACGTCAGTATGATTTTGCATTGTAATTGCG-TGTAATGGATCTGACTGTT--T--------------T---TGTT-----------------TT---------AA--AC-----------CATTTT--CA----GATATTGGTACG-CGAATA--GCTA-ACATATAATGTTTTGTTGTTGGTTATTGATTTAAAGC-AAA--GAAG-----TAAAAAAATCTGAGAGAAATTATT-GAGA-----AAAA-ATAA----TTCCAT------TACGGACTAC-TTTTTGTTGTAATTGTTT
gi|5 : gt------CTA-----CT--TTTTGTTGTAATTGTTTACCAGGTAGCCTGGACGTCGTTTTGAAGTATTTTTTATCCCTCAAATaccaggtagcctggacgtcgttttgaagtattttttatccctcaaatg
gi|6 : gtcacaaccagtctatatgactgcaacaacttaatacatatttggtcgtatagatcagtagtttgtaagaaatgccgtcggggtaaacaagctccaatctataatgctatgcatgactaactctgctggtatctgacaagaaactgacaaaccagtgcccaaacatatttgattcagaaactgaagacaacaatgttcctgcaaatcacatcatgcaaatatccggtcacaaaacttgtcctctgtgaataactaatgtcgcatcaacgagaatcagcatacagaaatttcaaaagtttacactcgaacaaaacaaataagccaattccccatgctcaaaatgttcgcaagttattcacaggtcaactcatatagagcatggaatcgtcatctcatgtcaacgtgatcggtggaatccagagcattttcggtgctcagactcataaaggtacatttaatgtacaagttaatcaaaccaaaaacagttccccgcgaaaacaaccaattagtaagagaattcgactcattattgacagtgacagactttcaacaaaatgaaacgtgtgttaaaatgttgaaggtcgccgcaaatgaactatgacgtcagtatgattttgcattgtaattgcgtgtaatggatctgactgtttttgttttaaaccattttcagatattggtacgcgaatagctaacatataatgttttgttgttggttattgatttaaagcaaagaagtaaaaaaatctgagagaaattattgagaaaaaataattccattacggaACTAGAAACTGACAAACCACAGTGCCAGAGAATATTTGATTCAGAAACCGAACGAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGTTCACAA--AAAT-ATATCCTCTGTAAATAACTACTGTCA-TATCAACATGAA---C----------------CAGCATAAAGAAATTTATAAAAGTTAACATTTACAAAACAAAAATATGCTGATTCCGCATAATTCAAATGCTTA----------------------------CAGGTCAACTCGAAGTCTTT-AAACACGGCACAGTCAACT---ATCAACGTCATCGGTG--A---AAAGTAGGTT-CGGTGCTGA-AATCCATGGAAATACATT-AGTATAAAAGTAAACAAAGTTAAAAGCATTTCGCTGCTACGTCAACCAACTA-ATAGAGAATTAAGACCCATTGTTGACAGTGACACTGACT---AG-----CG-A-TAAAACACGATTCCCGTACATACGCTCGTACGTGTGTTTAAACATTGAATACCGCGGCATATGAACTATGCCGAATGTACAGTATGACATCAGTTTGGTTTAACGTTGTAATCTCACTG----------------T--T--------------T---T-----------------------------------------------------T--CA----GATATTGGTTCG-CTAATT--GATA-AATTATAGTGATTT-TTGTTGGTTATTGATTTGAAG--AAAAACAAAATTGATATAAAA-TATGAGAGAAAATATT-TATAACATTAAAT-GCT-----T----T------TACGGACCG----TTTGTTACCTTTGTTTTAATAAATGGTAACCGAATTGCAC------CTA-----CT--TTATGTTAT------TTACAAGGTAGCCAGGCCGTCGCTTTG-ATTTTTTTTC-TCCTTCAAATg
gi|7 : GATTCGCTACTT------TGGTTAA-TTA--AAAACATTGTGATACAGACACAGGAATA--------------GAG--------TT----T-GAAGCG--GA-----G------AGAC--TAACAATTGTAGCGGA-GGCGGTGACAATCCGAAAAATATTCGTCTTGTCTGACCTTA----GCTTT-GGCAAATATAAC---AGATTCTTTC-AATGTCCTGTACGTGTTTACG--GTAGAT-----------ACCACTGAATTATTCCGA------CACGCTCATT--CGAAATCACTGCTACAACTAAATACTTACCTGATCCTCTAGATCGATGGTTCGATGAgt
gi|7 : ATGACTAAATCTTTTGGTATCATAACGGACAAGAAACTGACAAACCACAGTGCCAGGAAATATTTGCTTCAGAAATTGAATGAC-AA----------ACAAAATCAACTCATGCAAATTACCGGTTACTA--AAAC-ATGTCCTATGAGAATAATTACTGTCA-CATCAACGAGATT--C----------------TAACAT-------TTTA----------GACTCAAACGACACACAAATGCCAATTACACATGCTCCAAATGCTCAGCAG--CAC-ACAA------ACTATTCACAGATCAA-----A-TCTA-----------ATCGCCGGCTCATGTCAACGTGACCTG-GTAATTCAAATCATTTT-CGGTGCTGA-AATTCACAAAGGTACATTTTATAT-CGTATAAACCAAGTTAAAATCAGCTCCCCGCCACAGCAACAAATTAGAA----AATTC-GACTCATTGTTGACAGTGGCActaaatcttttggtatcataacggacaagaaactgacaaaccacagtgccaggaaatatttgcttcagaaattgaatgacaaacaaaatcaactcatgcaaattaccggttactaaaacatgtcctatgagaataattactgtcacatcaacgagattctaacattttagactcaaacgacacacaaatgccaattacacatgctccaaatgctcagcagcacacaaactattcacagatcaaatctaatcgccggctcatgtcaacgtgacctggtaattcaaatcattttcggtgctgaaattcacaaaggtacattttatatcgtataaaccaagttaaaatcagctccccgccacagcaacaaattagaaaattcgactcattgttgacagtggca
gi|8 : gattcgctactttggttaattaaaaacattgtgatacagacacaggaatagagtttgaagcggagagactaacaattgtagcggaggcggtgacaatccgaaaaatattcgtcttgtctgaccttagctttggcaaatataacagattctttcaatgtcctgtacgtgtttacggtagataccactgaattattccgacacgctcattcgaaatcactgctacaactaaatacttacctgatcctctagatcgatggttcgGACAAGAAACTGGCAAACCACAGTACCAGAAAATATTTGCTTCAAAAATTGAATTAC-AACAATGTT---ACAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-AT--CCTATGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAAAAT-------TTTA----------CACTCGAACAACATAACTTTGCCAATTC--------------GTTCAGTAG--TGC-ACAT------ATTATTCACAGTTCAAATCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAATGTGACCAGTGTAATCCAAAGCATTTT-CTGTGCTTA-AATTCACAGAGGTACATTCAATGTGCATAAAAACCAAGTTAAAAGCAGCTCGCCGCCACAGCAACAAATTAAAAAGAAATTTC-GACACAATGTTGACAGTTACACTGATGCTC----------AATAACACATGATTC--------ACAA
gi|9 : ----------CACTCAAACAACACATACATGCCAATTCTACATGCTCCAAATGTGCCGCAG--CAC-AC----------TATTCACAGATCATCTCAAACTCTAT-AAACACGGCATCGCCAGCTCATATCAACGTGAATTTTGTAAATCAAAGCATTTT-TGGTGCTCA-ACTTCATGGAAGTACATTCAAT-TACATGTAAATCAAGTTAAAAGCAGTTCCCCACCGCAGCAACAAATAAGAAAGATAATTT-CACTCATTGTTGACAGTGACAC-GACCCTC----------AATAAAACAC-AT----------------------GTGTTAAAACATTGAAGATCGTGGTATATGAACTATGACATAGGTACTGTATTAAGTC----TGGTGTTGCATTGTAATCGCA-TG----------------T--T--------------T---TGGA-----------------TG---------TA--A------------CT--TT----------TTTTGTTTTGAATTATTAAATTA-AAAAATAGTGTTTTGTT--------TTGATTTAAAG--AAA--atgtatgagaaggctatatgtcacatatgtatgggaaggctatatgtcacatatatatgggaaggctatatgtcacatatatatgaaaaaataaaacatttacatattagtaaaatatgtacatgtttatgt
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 3333 1111 77777777777777777 222222 44444444444 33333333333333333333333333333333333333333333333333333333333 2222222 2222 111 3333 11 5555555555555555 1111111 1111111111 222222222222222222 44444444444444444 111111111 77777777777777777777777777777777777777777777777777777777777777777777777777777777777 111 11111 1111111 11 111111 11111 111111
lowQualScore : 3333 3 33 7777 8 3 0 00000000000000000 3 333333 0 11111111111 6 11 8 11111111111111111111111111111111111111111111111111111111111 2 7777777 0 11 3 0 0 1111 2 777 55 0 66 1 2 4 0 0 2 5555 11 1 1 3 5 2 2 5 4 5 1 7 5 66 4 2 4 55 1111111111111111 4 3333333 5555555555 0 1 1 777777777777777777 33 5 3 0 1 4 1 3 0 3 0 0 2 1 2 4 22222222222222222 1 777777777 4 0 5 1 0 22 4 33333333333333333333333333333333333333333333333333333333333333333333333333333333333 2 44 55 66 4 0 1 0 999 66 22222 9 0 4 5555555 4 2 11 55 4 111111 11111 66 222222 0 1 3 2 4
lowQualScore : .... . .. .... . . . ................. . ...... . ........... . .. . ........................................................... . ....... . .. . . . .... . ... .. . .. . . . . . . .... .. . . . . . . . . . . . . .. . . . .. ................ . ....... .......... . . . .................. .. . . . . . . . . . . . . . . . ................. . ......... . . . . . .. . ................................................................................... . .. .. .. . . . . ... .. ..... . . . ....... . . .. .. . ...... ..... .. ...... . . . . .
lowQualScore : 2222 2 88 0000 8 8 8 44444444444444444 2 000000 8 88888888888 0 88 0 33333333333333333333333333333333333333333333333333333333333 5 0000000 2 00 5 2 2 2222 5 555 88 2 88 0 5 2 2 2 5 5555 00 4 4 7 7 2 2 4 4 7 7 4 1 11 4 7 4 55 5555555555555555 9 0000000 9999999999 2 5 3 555555555555555555 22 1 6 5 2 2 4 6 4 6 8 9 7 0 4 0 99999999999999999 9 000000000 1 2 9 1 1 55 4 66666666666666666666666666666666666666666666666666666666666666666666666666666666666 6 99 44 11 4 9 4 1 444 11 55555 8 8 6 6666666 0 4 66 55 0 555555 11111 11 888888 7 4 4 6 4
consensus : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAATA---------TAGTGTATCGCCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAATAGAG-TT-G-A--G-GGAGAGACTGATAATTGTACC-GAGG-CG--GA-----GTACCGGAGGCG-TGACAATTGTA-C-GGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAA-----CG-AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCG-TG----------------T--T--------------T----------TG-------------------T-T---------AATT-ATTTTCAGATATTGGTACG-NTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG--AAA--CAAG-----TATAAAAATCTGAGAGAAAANATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
Reference ( family-4736 ) : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAATA---------TAGTGTATCGCCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAATAGAG-TT-GAA--G-GGAGAGACTGATAATTGTACC-GAGG-CG--GA-----GTACCGGAGGCG-TGACAATTGTA-C-GGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAA-----CG-AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCG-TG----------------T--T--------------T----------TG-------------------T-T---------AA---ATNTTCAGATATTGGTACG-NTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG--AAA--CAAG-----TATAAAAATCTGAGAGAAAATATT------AATAA-AATAAAANTNATTT--ACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
gi|1 : TACGCGCTATCAAATAATTAAAGCAAACATGGTTGATC-TAATTTTCCGAGTCGGTAATTCGATCAGTGCAAATTGATGGGAAAGGCATGGGCGTTGTGACTGAAATACTAGTCTAGTAGTGTATCGGCAATTTGCTACTT------TGGTCAAACTATAGA-----TGAGATGCGGACATAGAAATAGAG-TTAGAA--GCGGAGAGACTGACAATTGTACC-GGGGGCGATGACAATTGTACCGGGGGCGGTAGCAATTGTA-CCGGG-GGCGATGGCATTTCGAAAAGTATTCGTGTCGTCCGACTTTA----GCTTTGGGCAAATACAGC---AGAATCTTTCAAATGTCCTGTGCGTGTTTACAATGTAGATGCTCGGAAGAGACCACTGACCTATTCCGAGC-C--GACACACACTTACTATATCGCAGCTACAATTAAGCACTTACTTCGTCCTCTGGATCAATGGTTTG-TGAAAAATGCCTTACGGATGAACAAGCTCCAATCTATGACGACACACATGACTAAATC----------ACAACAAATAAGACATTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAATTGAATAAA-AACAATATTTCGGCAAATTCACATCATGCAAATATC-GGTCACTT--TAAC-ATTTCCTCTGTAAATAACTACTGTCA-TATCAACGCGAAT--C----------------CAACAT-------TTTA----------CACTCAAACGACACAAATATGCTAATTCCACATGCTCCAAATGTTCACCAG--CAC-ACAT------ACTATTCACAGGTAAACTCTAACTTTTT-GACCACGGCATCACCAGCTCATGTTAACGTGACCGGTGTAATCAAAAGCATTTTACGGTGCTCA-AATTTACGGCGATACATTCAATGTAAATGTAGAACAAGTTCAAAGCAG-TCCCCGCGACAGCAACAATTTAGAAAGAAAATTC-CACTTATTGTTGACAATGACACTGACTCTCAATGCTTTG-AATAAAACACGATTC--------ACCATCACATACGCGTT-AAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTATATGACGTCAGTATGATGTTGCAGTGTAATCGCG-TG----------------T--T--------------T----------TG-------------------T-TAA-------AA---AAAATCAAATATATATACG-GTTATT--ACTA-AGATATAGTGTTTTGTTGTTTGTTATTGATTTAAGG--AAA--CAAG-----CATAGAAATAAGAGAGAAAAGATT------GATAATAATAAAAAAAATTT--ACGGACT-C-TTTTTCATGCATTTATTTTAATGAATAGTAACCGAATTACAC------CCA-----AT--TCATGTTGT------TTACAATGTAGTCAGACTGTTGCTTTGAAGTTTTTTTC-TGCCTCAAAT
gi|10 : TTCG-TGAGAAATGCCGTCGGGGTAAACAAGTTCCAATCTATGATAGCAAGCATGGCTAAATCTGCTGGTATCACAGCCGACAAAAATCTGAGAAATCACAGTGACAGAAAATATTTGATTCAGAAACTGAGCAACAAACATTGTTCCTGC-AAATCACATCATGTAAATATCCGGTCACAA--AAAC-ATATCCTCTGTTAATAACAACTGTCA-CATCAACGAAAAT--CAGCATAAAAAAAATCACAAAAT-------TTTA----------CACTCGAACAACACAAATATGCCTATTCCTTAGGCTCCAAATGTTCAGAAG---GCTGTGT------ATCATTTACAGGTTAACTCGAACTCTGT-GAACTCGACGTCGCCAGCTCTTATCGACGTGATCGGGGGAACCCAAAGCATTTT-AAGTGCTCA-AATT
gi|11 : T--C----------------CAAGAG-------TGTA----------CACTCAAACGACGTAATCATACCAATTCCACATGCCCCATATGTTAAGCAG--CGC-ACAT------A-----CACAGGTCAACTCGCAATATAC-AGTCACAGCATCGTCAGCTCATGTCGACGT-------------CAAAACATTTT-CGGTACTTACAATT
gi|11 : cagcacaaagtaagtCATATCAACCATTCAGAAAGATAATTT-GACTCAT------------CACTGACTCTCAA----------TAGTACACAATTT--------TCTATCATACATGTGTTTAAAAATTGAATTTTACGAC-TATGACGTAC-ATGTGGGTACCGTATTACGTAAGTATGGTGTTGTATTGTTATCGCG-TG----------------T--TTTTAC---------T----------TG-------------------T-TTATATTTTGAATT-ATGTTCAGACATTGTTACG-TTTACT--GCTT-AAACATAaaatgtcaaacatatcaaccattcagaaagataatttgactcatcactgactctcaatagtacacaattttctatcatacatgtgtttaaaaattgaattttacgactatgacgtacatgtgggtaccgtattacgtaagtatggtgttgtattgttatcgcgtgtttttacttgtttatattttgaattatgttcagacattgttacgtttactgcttaaacataa
gi|12 : cagcacaaagtaagttccaagagtgtacactcaaacgacgtaatcataccaattccacatgccccatatgttaagcagcgcacatacacaggtcaactcgcaatatacagtcacagcatcgtcagctcatgtcgacgtcaaaacattttcggtacttacaattaaatgtcaaa-TG----------------T--T--------------T----------T----------------------T---------AATT-ATTTTCAGATATTTGTACA-ATTATT--TCTA-AAATATAGTCTTTTGATGTTGGTTATGGATTTAAA-----------------TATAATAATCTG--------------------------------TGACTT--ACGAACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACTGAAGTACAC------CTA-----CT--TTATGTTAT------TTAATAGGTAGCCTGGTCATC-----------TTTTTC-TCCCTCAAAa
gi|13 : gtgtgtttttccattgttatcacgtgttttggatctaactgttttttgtttttttAATTC----AGTGCAAATATTTGGAAATGCCAT---CGTATCGACTGAAAT-------------------------TCGCTATTT------TGGTCAAACTA---------TGTGATACGGACAT-GAAAT-----TT----------AGAAATTGAGAGTT----T-GAAG-CG--AA-----G------AGAC--TGACAATTGTA-T-AGGAGGCGGTGATAATCCGAAAAATGTTAGTCTCGTCCGACCTTAGCCGGCTTTGGAAAAATACAGT---AGATTCTTT-AAATGCCCGGTCCGTGTTTGCA
gi|14 : aaaGCTGTCAAAAAATCAAAACAAACATGGTTG----TAA--------GTCAGTAATTC----AGTGCAAATTG-----AAAGGCATGGGCATTG-------AA-A---------TAGTGAATTGCCGATTCGCTACTT------TGGTCAAAC----AA-----TGTGATACGGACATAGATAAAGAGTTT-GTA--GTGGAGAGACTGATAATT-T---------------------TACCAGAGGCGTTGACAATT-----------------------CGAAAAATGTTTGTCTCATCCGACCTTA----CTTTTGGGCAA
gi|15 : atggTACGCGCTGTCAAAAAATCAAAACAAACATGGCTAA-CATAATTTTCCGTTTCAGTAATTC----AGTGTTAATTGCTGGGAAAGGCCTGTGCGTTGTGACTAAAATA---------GA--GTATCGTGGATTTGCTATTTTTTATATGGTCAAACT----A-----TGTGATATGGACATTGAAAGAGAG-TT-CGATTA-GGAGAGACTGGTTATTGCACCTGAGG-C
gi|16 : AA--CAAG-----TA-AAAAATCTGCGAGAAATTATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCAATTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCTGGCCGTCGCTTTGGGGTATGTTTC-TCCCTCAAATtg
gi|17 : TGA-AATAAAATTCCTTTGTACAAAGTTC-GTTTTGTTGCATTTGTTTCAATGAACTGTAACCGAAGAACAC------CTA-----CT--TCATGTTGA------TTACCAGGTAGCCTGGCCGTTGCTTTGAAGTCATTGTC-ATCCTCAAATg
gi|18 : tCTGTAAAAAACTCAAAACAAACATGGTTGG-CCTAATTTTCCAAGTCGGTAATTC----AGTGCAAATTGGTGGGAAAGGCATGGGCGTTGTGGCTGA-------------------ATCTCCGATTCGCAAC
gi|19 : GAGAGAAAAGATT------AATAT-ATTAAA-TTCCTTT--ATGGACTAA-TTTTTGTTGCATTTGTTTCAATCAATGGTAA-----------------------------TCA---TGT------TTACCACGTAGCCAGGCCATCGCTTTG
gi|2 : AAATACAGCTGCAGATTCTTTCAAATGTCCTGTGCGTGTTTGAAAAGTACATGCTCAGAAGAACCCATTGAACTATTCTGAGCCGT-CACACCCATT--TTATATCGCTGCAGCAACTAA-------CCCGGTCCTCTAGAGCAGTGGTCCG-TGAGAAATCTTGTCGGGGTAAAAAAGCTCAAATCTATGATGACTTGCATGACAAAATCTACTGGTATCACAACAGACACGACATTGACAAACCACAGTGGTAGAAAAGATTTGCTTTAAAACCTGAACGAC-AACAATGTTCCTG-----TCA-ATCATACAAATATCCGGTCACAA--AAAC-ACAGCATCAACGA-TAA------TCAGCATAAA--ACAATTTC----------------TAAAAT-------TTTA----------CGCTCGAACAACACAAATTTGCCAATTTCCCATGTTCTAAATGTTCAGCAGTACGC-ATATTATTCAATTATTCAAAGGTCAACTCGAATTCTAT-GAACACGGCCTCGTCAGCTCATGTGGAAGTGACCGGCGGAATACAAAGCATTTT-CGGTTCTCA-AATTCATGGAGGTACATTCAATGTACATGTAAATCAAGTCAAAACCAGTTATCCACCACAGCAACCAATTAGAAAGAGAATAC-GACTCACTGTTGACAGTGACACTGAC-----G-----TGAAACAAAATACGAATC--------GCAATCACACGCGTTTTTAAATATCGAAGATCGCAGCATATAA--TCTGACAGAGGTACTGCATCACGTTAGTATGGTGTTGCGTTAAAATCGCG-TG----------------TAATAGATCTAACTGTTAT----------TG-------------------T-TTTC------AATT-ATTTTCATATATTGGCACA-CTTATT--GCTT-GCATAAAGTGTTTTGTTGCTGGTTATTAGTTTAAAGA-AAA--CAAG-----TATAAAAATCAGGGAGAAAATACT------AATAA-AATAAAATTCCTTT---TGAACTAC-TTTTTGTTGCTAATGATTCAATGAATGTTAACCGAATTACAC------CT
gi|20 : TACTAAGAAGCTAG-CCGTTGCTTTGAAGTATTTTAA-TCCCTCAAGT
gi|3 : CAATGTATATGCTCAGAAGAGACCTAAGAACTATTCCGAGC-AGACATACCCATT--CTAATTCGCTGGTACAACCCAGCCCTTAACTGGTTCCCTGGATCAATA--TC-------AA----------GTATACTAGCTCCAATATATGAACACATGCAT-ACTATATCTGCAGGTACTACAACAGACAAGAAACTGACAAACTACATTGCCAGAAAATATTTGCTTCGAAAATTAAATGAC-AACAATGTT---GCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCGCCTGTGAATAATTACTGTCA-CATCAACGAGAAT--C----------------CAACAT-------TTTA----------CACTCAAACAACACAAAT--------TCCACATGCTCCAAATGTTCAGCAG--CAT-ACAT------ATTATTCACAAGTCAACTCAAACTCTAT-GAACACGGCATCAACAGTTCATGTCAACGTGACCGGTGTAATCCAAATCATTTT-TGGTGCTTA-AATTCACGGAGGTACATTCAATG---AT---AACCAGGTTTAAGGCAGCTCCCCGCCACAGCAGCAAATTAGAAAGACATTTC-GACTC-------------ACACTGACACTCAA-----C-----AAAACACAATTC--------ACAAACACACGCGTGTTAAAACATTGAAGGTAGCGGTATATGAACTATGACATAGGTACTGTATGACGTCAGTATGGTGTTGCATTTTAATCGCG-TG----------------T--T--------------T----------TGAATCTAACTGTTGTTTTTTT-T---------AATT-TTTTTCTGATATCGGTACG-CTTATT--GCTA-AAATATAGTGTTTTATTGTTGGTTATTGATTTAAAGAAAAA--GAAG-----TTAAAAAATCTGAGAGAAAAAATT------TAAAA-AATGAAATTCTTTT--ACGGACTACTTTTTTGTTTCATTTGTTTCAATGAATGGTAACCGAGTTACACCTTAGGCTA-----CT--GTATGTTGT------TTACTAGGTAGCCAGGATGTCGCTTTGCAGTCTTTTTC-TCCCTCAAATtag
gi|4 : CAACTAAGCATTTACCTGGCCCTCTGTATCAATGGTTCG-TAAGAAATGCCGTCGGGGTAAACTAGCTCCAGTTGATGACGACACGCATGACTTAATCTGCTGGTATCACAACAGACTGGAAACTGACAAACCTCAGTGCCAGAAAATATTTGCTTCAGAAATTCA------AACATTATTCCTGCAAAATCACATCATGCAAATATCCGGTCACTAACAAATAATATCCTCTGTGAATATCTGCTGTCA-CATCAACGAGAAT--C----------------CAA----------TTTA----------TACTCAATCAATACAATCGTGCCAATTCCATATGCACAAAATGTTTAGCAG--CAC-A------------------AG------------TCTAT-GAACACGGCGTTGCCAGTTCATGTCAACGTTACCTGTGTAATCAAAAGCATGTT-CGGTGTTTA-AATTCACGGAGGTACATTCAATGTACATGTA----AAGTTAAAAGCAGCTCCCCGCCACATTAG-GAGTTGAAAAGATAATTC-CA-TCCTTGTTTACCGTGACACTGACTCT--A-----T---ATAAAACACGATTC--------ACCACCACACGCGTGTTGAAACATTGTAGATCGCAGCATATGAACTATGAATTTGGTTCTTTATGACGTCAGTGTGGTGCTGCATTTTAATCACC-TG----------------T--T--------------TAGGTTCTAAATGATTTTGTT-----------T-T---------AATTTATTTTC--ATATCGGTATT-GTTATT--GCTATATATATAGTGTTTTTATGATGTTT-TTTATTTAAA---AAA--CAAG-----TA-AAAAA-CTAAGAGAAAAGATTCAATGAAATAA-AATAAAACTCCTTT--ACGGACTAC-TTTTTGTTTCATTCGTTCCAATGAATTGTAACCGAATTACAC------CTAATAACCTAATCGTAATGT------TGACTAGGTAGTCAGGCCGTCGCTTTGAAGAATTTTTC-TCTCTCAAAT
gi|5 : cg--CACAACCAGT--CTATATGACTGCAACAACTTAATACATATTTGGTCGTATAGATCAGTAGTTTG-TAAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATAATGCTATGCATGACTAACTCTGCTGGTATCT-----GACAAGAAACTGACAAACCA--GTGCCCAAACATATTTGATTCAGAAACTGAA-GAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGGTCAC-A--AAAC-TTGTCCTCTGTGAATAACTAATGTCG-CATCAACGAGAAT--CAGCATACAGAAATTT-CAAAAG-------TTTA----------CACTCGAACAAAACAAATAAGCCAATTCCCCATGCTCAAAATGTTC-GCAA----------------GTTATTCACAGGTCAACTCA-----TATAGAGCATGGAATCGTCATCTCATGTCAACGTGATCGGTGGAATCCAGAGCATTTT-CGGTGCTCA-GACTCATAAAGGTACATTTAATGTACAAGTTAATCAAACCAAAAACAGTTCCCCGCGAAAACAACCAATTAGTAAGAGAATTC-GACTCATTATTGACAGTGACA--GACTTTCAA-----CA-AA------------------------ATGAAACGTGTGTTAAAATGTTGAAGGTCGCCGCAAATGAAC----------------TATGACGTCAGTATGATTTTGCATTGTAATTGCG-TGTAATGGATCTGACTGTT--T--------------T----------TGTT-----------------T-T---------AAACCATTTTCAGATATTGGTACG-CGAATA--GCTA-ACATATAATGTTTTGTTGTTGGTTATTGATTTAAAGC-AAA--GAAG-----TAAAAAAATCTGAGAGAAATTATT------GAGAA-AAAATAATTCCATT--ACGGACTAC-TTTTTGTTGTAATTGTTT
gi|5 : gt------CTA-----CT--TTTTGTTGTAATTGTTTACCAGGTAGCCTGGACGTCGTTTTGAAGTATTTTTTATCCCTCAAATaccaggtagcctggacgtcgttttgaagtattttttatccctcaaatg
gi|6 : gtcacaaccagtctatatgactgcaacaacttaatacatatttggtcgtatagatcagtagtttgtaagaaatgccgtcggggtaaacaagctccaatctataatgctatgcatgactaactctgctggtatctgacaagaaactgacaaaccagtgcccaaacatatttgattcagaaactgaagacaacaatgttcctgcaaatcacatcatgcaaatatccggtcacaaaacttgtcctctgtgaataactaatgtcgcatcaacgagaatcagcatacagaaatttcaaaagtttacactcgaacaaaacaaataagccaattccccatgctcaaaatgttcgcaagttattcacaggtcaactcatatagagcatggaatcgtcatctcatgtcaacgtgatcggtggaatccagagcattttcggtgctcagactcataaaggtacatttaatgtacaagttaatcaaaccaaaaacagttccccgcgaaaacaaccaattagtaagagaattcgactcattattgacagtgacagactttcaacaaaatgaaacgtgtgttaaaatgttgaaggtcgccgcaaatgaactatgacgtcagtatgattttgcattgtaattgcgtgtaatggatctgactgtttttgttttaaaccattttcagatattggtacgcgaatagctaacatataatgttttgttgttggttattgatttaaagcaaagaagtaaaaaaatctgagagaaattattgagaaaaaataattccattacggaACTAGAAACTGACAAACCACAGTGCCAGAGAATATTTGATTCAGAAACCGAACGAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGTTCACAA--AAAT-ATATCCTCTGTAAATAACTACTGTCA-TATCAACATGAA---C----------------CAGCATAAAGAAATTTATAAAAGTTAACATTTACAAAACAAAAATATGCTGATTCCGCATAATTCAAATGCTTA----------------------------CAGGTCAACTCGAAGTCTTT-AAACACGGCACAGTCAACT---ATCAACGTCATCGGTG--A---AAAGTAGGTT-CGGTGCTGA-AATCCATGGAAATACATT-AGTATAAAAGTAAACAAAGTTAAAAGCATTTCGCTGCTACGTCAACCAACTA-ATAGAGAATTAAGACCCATTGTTGACAGTGACACTGACT---AG-----CG-A-TAAAACACGATTCCCGTACATACGCTCGTACGTGTGTTTAAACATTGAATACCGCGGCATATGAACTATGCCGAATGTACAGTATGACATCAGTTTGGTTTAACGTTGTAATCTCACTG----------------T--T--------------T----------T-----------------------------------------TCAGATATTGGTTCG-CTAATT--GATA-AATTATAGTGATTT-TTGTTGGTTATTGATTTGAAG--AAAAACAAAATTGATATAAAA-TATGAGAGAAAATATT------TATAA-CATTAAATGCTTTT--ACGGACCG----TTTGTTACCTTTGTTTTAATAAATGGTAACCGAATTGCAC------CTA-----CT--TTATGTTAT------TTACAAGGTAGCCAGGCCGTCGCTTTG-ATTTTTTTTC-TCCTTCAAATg
gi|7 : GATTCGCTACTT------TGGTTAA-TTA--AAAACATTGTGATACAGACACAGGAATAGAG-TT----------------------------T-GAAG-CG--GA-----G------AGAC--TAACAATTGTAGC-GGA-GGCGGTGACAATCCGAAAAATATTCGTCTTGTCTGACCTTA----GCTTT-GGCAAATATAAC---AGATTCTTTC-AATGTCCTGTACGTGTTTACG--GTAGAT-----------ACCACTGAATTATTCCGA------CACGCTCATT--CGAAATCACTGCTACAACTAAATACTTACCTGATCCTCTAGATCGATGGTTCGATGAgt
gi|7 : ATGACTAAATCTTTTGGTATCATAACGGACAAGAAACTGACAAACCACAGTGCCAGGAAATATTTGCTTCAGAAATTGAATGAC-AA----------ACAAAATCAACTCATGCAAATTACCGGTTACTA--AAAC-ATGTCCTATGAGAATAATTACTGTCA-CATCAACGAGATT--C----------------TAACAT-------TTTA----------GACTCAAACGACACACAAATGCCAATTACACATGCTCCAAATGCTCAGCAG--CAC-ACAA------ACTATTCACAGATCAA-----A-TCTA-----------ATCGCCGGCTCATGTCAACGTGACCTG-GTAATTCAAATCATTTT-CGGTGCTGA-AATTCACAAAGGTACATTTTATAT-CGTATAAACCAAGTTAAAATCAGCTCCCCGCCACAGCAACAAATTAGAA----AATTC-GACTCATTGTTGACAGTGGCActaaatcttttggtatcataacggacaagaaactgacaaaccacagtgccaggaaatatttgcttcagaaattgaatgacaaacaaaatcaactcatgcaaattaccggttactaaaacatgtcctatgagaataattactgtcacatcaacgagattctaacattttagactcaaacgacacacaaatgccaattacacatgctccaaatgctcagcagcacacaaactattcacagatcaaatctaatcgccggctcatgtcaacgtgacctggtaattcaaatcattttcggtgctgaaattcacaaaggtacattttatatcgtataaaccaagttaaaatcagctccccgccacagcaacaaattagaaaattcgactcattgttgacagtggca
gi|8 : gattcgctactttggttaattaaaaacattgtgatacagacacaggaatagagtttgaagcggagagactaacaattgtagcggaggcggtgacaatccgaaaaatattcgtcttgtctgaccttagctttggcaaatataacagattctttcaatgtcctgtacgtgtttacggtagataccactgaattattccgacacgctcattcgaaatcactgctacaactaaatacttacctgatcctctagatcgatggttcgGACAAGAAACTGGCAAACCACAGTACCAGAAAATATTTGCTTCAAAAATTGAATTAC-AACAATGTT---ACAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-AT--CCTATGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAAAAT-------TTTA----------CACTCGAACAACATAACTTTGCCAATTC--------------GTTCAGTAG--TGC-ACAT------ATTATTCACAGTTCAAATCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAATGTGACCAGTGTAATCCAAAGCATTTT-CTGTGCTTA-AATTCACAGAGGTACATTCAATGTGCATAAAAACCAAGTTAAAAGCAGCTCGCCGCCACAGCAACAAATTAAAAAGAAATTTC-GACACAATGTTGACAGTTACACTGATGCTC----------AATAACACATGATTC--------ACAA
gi|9 : ----------CACTCAAACAACACATACATGCCAATTCTACATGCTCCAAATGTGCCGCAG--CAC-AC----------TATTCACAGATCATCTCAAACTCTAT-AAACACGGCATCGCCAGCTCATATCAACGTGAATTTTGTAAATCAAAGCATTTT-TGGTGCTCA-ACTTCATGGAAGTACATTCAAT-TACATGTAAATCAAGTTAAAAGCAGTTCCCCACCGCAGCAACAAATAAGAAAGATAATTT-CACTCATTGTTGACAGTGACAC-GACCCTC----------AATAAAACAC-AT----------------------GTGTTAAAACATTGAAGATCGTGGTATATGAACTATGACATAGGTACTGTATTAAGTC----TGGTGTTGCATTGTAATCGCA-TG----------------T--T--------------T----------TGGA-----------------TGT---------AA---CTTTTT-----TTGTTTTGAATTATTAAATTA-AAAAATAGTGTTTTGTT--------TTGATTTAAAG--AAA--atgtatgagaaggctatatgtcacatatgtatgggaaggctatatgtcacatatatatgggaaggctatatgtcacatatatatgaaaaaataaaacatttacatattagtaaaatatgtacatgtttatgt
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 3333 1111 7777777777777777777 222222 44444444444 333333333333333333333333333333333333333333333333333333333333 2222222 2222 111 3333 11 5555555555555555 1111111 1111111111 222222222222222222 4444444444444444 111111111 333333333333333333333333333333333333333333333333333333333333333333333333333333 222 11111 1111111 111111 11111 111111
lowQualScore : 3333 3 0 7777 88 1 1111111111111111111 3 333333 0 11111111111 6 11 8 999999999999999999999999999999999999999999999999999999999999 2 7777777 0 11 3 0 0 1111 2 777 55 0 66 1 2 4 0 0 2 5555 11 1 1 3 5 2 2 5 4 5 1 7 5 66 4 2 4 55 1111111111111111 4 3333333 5555555555 0 1 1 777777777777777777 33 5 3 0 1 4 1 3 0 3 0 0 2 1 2 4 2222222222222222 1 777777777 4 0 5 1 0 22 111111111111111111111111111111111111111111111111111111111111111111111111111111 44 0 44 0 1 66 4 0 1 0 666 22222 9 2 5555555 4 55 4 111111 11111 66 222222 0 1 3 2 4
lowQualScore : .... . . .... .. . ................... . ...... . ........... . .. . ............................................................ . ....... . .. . . . .... . ... .. . .. . . . . . . .... .. . . . . . . . . . . . . .. . . . .. ................ . ....... .......... . . . .................. .. . . . . . . . . . . . . . . . ................ . ......... . . . . . .. .............................................................................. .. . .. . . .. . . . . ... ..... . . ....... . .. . ...... ..... .. ...... . . . . .
lowQualScore : 2222 2 2 0000 88 0 8888888888888888888 2 000000 8 88888888888 0 88 0 777777777777777777777777777777777777777777777777777777777777 5 0000000 2 00 5 2 2 2222 5 555 88 2 88 0 5 2 2 2 5 5555 00 4 4 7 7 2 2 4 4 7 7 4 1 11 4 7 4 55 5555555555555555 9 0000000 9999999999 2 5 3 555555555555555555 22 1 6 5 2 2 4 6 4 6 8 9 7 0 4 0 9999999999999999 9 000000000 1 2 9 1 1 55 111111111111111111111111111111111111111111111111111111111111111111111111111111 55 1 99 1 0 11 4 9 4 1 222 55555 8 6 6666666 0 55 0 555555 11111 11 888888 7 4 4 6 4
consensus : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAATA---------TAGTGTATCGCCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAATAGAG-TT-G--A--G-GGAGAGACTGATAATTGTACC-GAGG-CG--GA-----GTACCGGAGGCG-TGACAATTGTA-C-GGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAACG-----AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-TTATTTTCAGATATTGGTACGNTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAGA-AAACAA-----GTATAAAAATCTGAGAGAAAANATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
Reference ( family-4736 ) : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAATA---------TAGTGTATCGCCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAATAGAG-TT-G--A--G-GGAGAGACTGATAATTGTACC-GAGG-CG--GA-----GTACCGGAGGCG-TGACAATTGTA-C-GGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAACG-----AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-TTATTTTCAGATATTGGTACGNTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG--AAACAA-----GTATAAAAATCTGAGAGAAAANATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
gi|1 : TACGCGCTATCAAATAATTAAAGCAAACATGGTTGATC-TAATTTTCCGAGTCGGTAATTCGATCAGTGCAAATTGATGGGAAAGGCATGGGCGTTGTGACTGAAATACTAGTCTAGTAGTGTATCGGCAATTTGCTACTT------TGGTCAAACTATAGA-----TGAGATGCGGACATAGAAATAGAG-TT-AGAA--GCGGAGAGACTGACAATTGTACC-GGGGGCGATGACAATTGTACCGGGGGCGGTAGCAATTGTA-CCGGG-GGCGATGGCATTTCGAAAAGTATTCGTGTCGTCCGACTTTA----GCTTTGGGCAAATACAGC---AGAATCTTTCAAATGTCCTGTGCGTGTTTACAATGTAGATGCTCGGAAGAGACCACTGACCTATTCCGAGC-C--GACACACACTTACTATATCGCAGCTACAATTAAGCACTTACTTCGTCCTCTGGATCAATGGTTTG-TGAAAAATGCCTTACGGATGAACAAGCTCCAATCTATGACGACACACATGACTAAATC----------ACAACAAATAAGACATTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAATTGAATAAA-AACAATATTTCGGCAAATTCACATCATGCAAATATC-GGTCACTT--TAAC-ATTTCCTCTGTAAATAACTACTGTCA-TATCAACGCGAAT--C----------------CAACAT-------TTTA----------CACTCAAACGACACAAATATGCTAATTCCACATGCTCCAAATGTTCACCAG--CAC-ACAT------ACTATTCACAGGTAAACTCTAACTTTTT-GACCACGGCATCACCAGCTCATGTTAACGTGACCGGTGTAATCAAAAGCATTTTACGGTGCTCA-AATTTACGGCGATACATTCAATGTAAATGTAGAACAAGTTCAAAGCAG-TCCCCGCGACAGCAACAATTTAGAAAGAAAATTC-CACTTATTGTTGACAATGACACTGACTCTCAATGCTTTGAATAAAACACGATTC--------ACCATCACATACGCGTT-AAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTATATGACGTCAGTATGATGTTGCAGTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-AAAAAATCAAATATATATACGGTTATT--ACTA-AGATATAGTGTTTTGTTGTTTGTTATTGATTTAAGG--AAACAA-----GCATAGAAATAAGAGAGAAAAGATT------GATAATAATAAAAAAAATTT--ACGGACT-C-TTTTTCATGCATTTATTTTAATGAATAGTAACCGAATTACAC------CCA-----AT--TCATGTTGT------TTACAATGTAGTCAGACTGTTGCTTTGAAGTTTTTTTC-TGCCTCAAAT
gi|10 : TTCG-TGAGAAATGCCGTCGGGGTAAACAAGTTCCAATCTATGATAGCAAGCATGGCTAAATCTGCTGGTATCACAGCCGACAAAAATCTGAGAAATCACAGTGACAGAAAATATTTGATTCAGAAACTGAGCAACAAACATTGTTCCTGC-AAATCACATCATGTAAATATCCGGTCACAA--AAAC-ATATCCTCTGTTAATAACAACTGTCA-CATCAACGAAAAT--CAGCATAAAAAAAATCACAAAAT-------TTTA----------CACTCGAACAACACAAATATGCCTATTCCTTAGGCTCCAAATGTTCAGAAG---GCTGTGT------ATCATTTACAGGTTAACTCGAACTCTGT-GAACTCGACGTCGCCAGCTCTTATCGACGTGATCGGGGGAACCCAAAGCATTTT-AAGTGCTCA-AATT
gi|11 : T--C----------------CAAGAG-------TGTA----------CACTCAAACGACGTAATCATACCAATTCCACATGCCCCATATGTTAAGCAG--CGC-ACAT------A-----CACAGGTCAACTCGCAATATAC-AGTCACAGCATCGTCAGCTCATGTCGACGT-------------CAAAACATTTT-CGGTACTTACAATT
gi|11 : cagcacaaagtaagtCATATCAACCATTCAGAAAGATAATTT-GACTCAT------------CACTGACTCTCAA---------TAGTACACAATTT--------TCTATCATACATGTGTTTAAAAATTGAATTTTACGAC-TATGACGTAC-ATGTGGGTACCGTATTACGTAAGTATGGTGTTGTATTGTTATCGCGTG----------------T--TTTTAC---------T----------TG-------------------T-TTATATTTTGAA-TTATGTTCAGACATTGTTACGTTTACT--GCTT-AAACATAaaatgtcaaacatatcaaccattcagaaagataatttgactcatcactgactctcaatagtacacaattttctatcatacatgtgtttaaaaattgaattttacgactatgacgtacatgtgggtaccgtattacgtaagtatggtgttgtattgttatcgcgtgtttttacttgtttatattttgaattatgttcagacattgttacgtttactgcttaaacataa
gi|12 : cagcacaaagtaagttccaagagtgtacactcaaacgacgtaatcataccaattccacatgccccatatgttaagcagcgcacatacacaggtcaactcgcaatatacagtcacagcatcgtcagctcatgtcgacgtcaaaacattttcggtacttacaattaaatgtcaaaGTGTGTTTTTCCATTGTTATCACGTG----------------T--T--------------T----------TGGAT----------------C-T---------AA-CTGTTTTa
gi|12 : TG----------------T--T--------------T----------T----------------------T---------AA-TTATTTTCAGATATTTGTACAATTATT--TCTA-AAATATAGTCTTTTGATGTTGGTTATGGATTTAAA---------------TATAATAATCTGTGA-------------------------------CT-T--ACGAACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACTGAAGTACAC------CTA-----CT--TTATGTTAT------TTAATAGGTAGCCTGGTCATC-----------TTTTTC-TCCCTCAAAttgttttttttgtttttaattattttcagatatttgtacaattatttctaaaatatagtcttttgatgttggttatggatttaaatataataatctgtgacttacgaactactttttgttgcatttgtttcaatgaatggtaactgaagtacacctactttatgttatttaataggtagcctggtcatctttttctccctcaaa
gi|13 : gtgtgtttttccattgttatcacgtgttttggatctaactgttttttgtttttttAATTC----AGTGCAAATATTTGGAAATGCCAT---CGTATCGACTGAAAT-------------------------TCGCTATTT------TGGTCAAACTA---------TGTGATACGGACAT-GAAAT-----TT-----------AGAAATTGAGAGTT----T-GAAG-CG--AA-----G------AGAC--TGACAATTGTA-T-AGGAGGCGGTGATAATCCGAAAAATGTTAGTCTCGTCCGACCTTAGCCGGCTTTGGAAAAATACAGT---AGATTCTTT-AAATGCCCGGTCCGTGTTTGCA
gi|14 : aaaGCTGTCAAAAAATCAAAACAAACATGGTTG----TA--------AGTCAGTAATTC----AGTGCAAATT-----GAAAGGCATGGGC------ATTGAA--A---------TAGTGAATTGCCGATTCGCTACTT------TGGTCAAAC----AA-----TGTGATACGGACATAGATAAAGAGTTT-GT-A--GTGGAGAGACTGATAATT-T---------------------TACCAGAGGCGTTGACAATT-----------------------CGAAAAATGTTTGTCTCATCCGACCTTA----CTTTTGGGCAA
gi|15 : atggTACGCGCTGTCAAAAAATCAAAACAAACATGGCTAA-CATAATTTTCCGTTTCAGTAATTC----AGTGTTAATTGCTGGGAAAGGCCTGTGCGTTGTGACTAAAATA---------GA--GTATCGTGGATTTGCTATTTTTTATATGGTCAAACT----A-----TGTGATATGGACATTGAAAGAGAG-TTCG--ATTA-GGAGAGACTGGTTATTGCACCTGAGG-C
gi|16 : AACAA-----GTA-AAAAATCTGCGAGAAATTATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCAATTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCTGGCCGTCGCTTTGGGGTATGTTTC-TCCCTCAAATtg
gi|17 : TGA-AATAAAATTCCTTTGTACAAAGTTC-GTTTTGTTGCATTTGTTTCAATGAACTGTAACCGAAGAACAC------CTA-----CT--TCATGTTGA------TTACCAGGTAGCCTGGCCGTTGCTTTGAAGTCATTGTC-ATCCTCAAATg
gi|18 : tCTGTAAAAAACTCAAAACAAACATGGTTGG-CCTAATTTTCCAAGTCGGTAATTC----AGTGCAAATTGGTGGGAAAGGCATGGGCGTTGTGGCTGA-------------------ATCTCCGATTCGCAAC
gi|19 : GAGAGAAAAGATT------AATAT-ATTAAA-TTCCTTT--ATGGACTAA-TTTTTGTTGCATTTGTTTCAATCAATGGTAA-----------------------------TCA---TGT------TTACCACGTAGCCAGGCCATCGCTTTG
gi|2 : AAATACAGCTGCAGATTCTTTCAAATGTCCTGTGCGTGTTTGAAAAGTACATGCTCAGAAGAACCCATTGAACTATTCTGAGCCGT-CACACCCATT--TTATATCGCTGCAGCAACTAA-------CCCGGTCCTCTAGAGCAGTGGTCCG-TGAGAAATCTTGTCGGGGTAAAAAAGCTCAAATCTATGATGACTTGCATGACAAAATCTACTGGTATCACAACAGACACGACATTGACAAACCACAGTGGTAGAAAAGATTTGCTTTAAAACCTGAACGAC-AACAATGTTCCTG-----TCA-ATCATACAAATATCCGGTCACAA--AAAC-ACAGCATCAACGA-TAA------TCAGCATAAA--ACAATTTC----------------TAAAAT-------TTTA----------CGCTCGAACAACACAAATTTGCCAATTTCCCATGTTCTAAATGTTCAGCAGTACGC-ATATTATTCAATTATTCAAAGGTCAACTCGAATTCTAT-GAACACGGCCTCGTCAGCTCATGTGGAAGTGACCGGCGGAATACAAAGCATTTT-CGGTTCTCA-AATTCATGGAGGTACATTCAATGTACATGTAAATCAAGTCAAAACCAGTTATCCACCACAGCAACCAATTAGAAAGAGAATAC-GACTCACTGTTGACAGTGACACTGAC-----GTGA----AACAAAATACGAATC--------GCAATCACACGCGTTTTTAAATATCGAAGATCGCAGCATATAA--TCTGACAGAGGTACTGCATCACGTTAGTATGGTGTTGCGTTAAAATCGCGTG----------------TAATAGATCTAACTGTTAT----------TG-------------------T-TTTC------AA-TTATTTTCATATATTGGCACACTTATT--GCTT-GCATAAAGTGTTTTGTTGCTGGTTATTAGTTTAAAGA-AAACAA-----GTATAAAAATCAGGGAGAAAATACT------AATAA-AATAAAATTCCTTT---TGAACTAC-TTTTTGTTGCTAATGATTCAATGAATGTTAACCGAATTACAC------CT
gi|20 : TACTAAGAAGCTAG-CCGTTGCTTTGAAGTATTTTAA-TCCCTCAAGT
gi|3 : CAATGTATATGCTCAGAAGAGACCTAAGAACTATTCCGAGC-AGACATACCCATT--CTAATTCGCTGGTACAACCCAGCCCTTAACTGGTTCCCTGGATCAATA--TC-------AA----------GTATACTAGCTCCAATATATGAACACATGCAT-ACTATATCTGCAGGTACTACAACAGACAAGAAACTGACAAACTACATTGCCAGAAAATATTTGCTTCGAAAATTAAATGAC-AACAATGTT---GCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCGCCTGTGAATAATTACTGTCA-CATCAACGAGAAT--C----------------CAACAT-------TTTA----------CACTCAAACAACACAAAT--------TCCACATGCTCCAAATGTTCAGCAG--CAT-ACAT------ATTATTCACAAGTCAACTCAAACTCTAT-GAACACGGCATCAACAGTTCATGTCAACGTGACCGGTGTAATCCAAATCATTTT-TGGTGCTTA-AATTCACGGAGGTACATTCAATG---AT---AACCAGGTTTAAGGCAGCTCCCCGCCACAGCAGCAAATTAGAAAGACATTTC-GACTC-------------ACACTGACACTCAAC---------AAAACACAATTC--------ACAAACACACGCGTGTTAAAACATTGAAGGTAGCGGTATATGAACTATGACATAGGTACTGTATGACGTCAGTATGGTGTTGCATTTTAATCGCGTG----------------T--T--------------T----------TGAATCTAACTGTTGTTTTTTT-T---------AA-TTTTTTTCTGATATCGGTACGCTTATT--GCTA-AAATATAGTGTTTTATTGTTGGTTATTGATTTAAAGAAAAAGAA-----GTTAAAAAATCTGAGAGAAAAAATT------TAAAA-AATGAAATTCTTTT--ACGGACTACTTTTTTGTTTCATTTGTTTCAATGAATGGTAACCGAGTTACACCTTAGGCTA-----CT--GTATGTTGT------TTACTAGGTAGCCAGGATGTCGCTTTGCAGTCTTTTTC-TCCCTCAAATtag
gi|4 : CAACTAAGCATTTACCTGGCCCTCTGTATCAATGGTTCG-TAAGAAATGCCGTCGGGGTAAACTAGCTCCAGTTGATGACGACACGCATGACTTAATCTGCTGGTATCACAACAGACTGGAAACTGACAAACCTCAGTGCCAGAAAATATTTGCTTCAGAAATTCA------AACATTATTCCTGCAAAATCACATCATGCAAATATCCGGTCACTAACAAATAATATCCTCTGTGAATATCTGCTGTCA-CATCAACGAGAAT--C----------------CAA----------TTTA----------TACTCAATCAATACAATCGTGCCAATTCCATATGCACAAAATGTTTAGCAG--CAC-A------------------AG------------TCTAT-GAACACGGCGTTGCCAGTTCATGTCAACGTTACCTGTGTAATCAAAAGCATGTT-CGGTGTTTA-AATTCACGGAGGTACATTCAATGTACATGTA----AAGTTAAAAGCAGCTCCCCGCCACATTAG-GAGTTGAAAAGATAATTC-CA-TCCTTGTTTACCGTGACACTGACTCT--AT-------ATAAAACACGATTC--------ACCACCACACGCGTGTTGAAACATTGTAGATCGCAGCATATGAACTATGAATTTGGTTCTTTATGACGTCAGTGTGGTGCTGCATTTTAATCACCTG----------------T--T--------------TAGGTTCTAAATGATTTTGTT-----------T-T---------AATTTATTTTC--ATATCGGTATTGTTATT--GCTATATATATAGTGTTTTTATGATGTTT-TTTATTTAAA---AAACAA-----GTA-AAAAA-CTAAGAGAAAAGATTCAATGAAATAA-AATAAAACTCCTTT--ACGGACTAC-TTTTTGTTTCATTCGTTCCAATGAATTGTAACCGAATTACAC------CTAATAACCTAATCGTAATGT------TGACTAGGTAGTCAGGCCGTCGCTTTGAAGAATTTTTC-TCTCTCAAAT
gi|5 : cg--CACAACCAGT--CTATATGACTGCAACAACTTAATACATATTTGGTCGTATAGATCAGTAGTTTG-TAAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATAATGCTATGCATGACTAACTCTGCTGGTATCT-----GACAAGAAACTGACAAACCA--GTGCCCAAACATATTTGATTCAGAAACTGAA-GAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGGTCAC-A--AAAC-TTGTCCTCTGTGAATAACTAATGTCG-CATCAACGAGAAT--CAGCATACAGAAATTT-CAAAAG-------TTTA----------CACTCGAACAAAACAAATAAGCCAATTCCCCATGCTCAAAATGTTC-GCAA----------------GTTATTCACAGGTCAACTCA-----TATAGAGCATGGAATCGTCATCTCATGTCAACGTGATCGGTGGAATCCAGAGCATTTT-CGGTGCTCA-GACTCATAAAGGTACATTTAATGTACAAGTTAATCAAACCAAAAACAGTTCCCCGCGAAAACAACCAATTAGTAAGAGAATTC-GACTCATTATTGACAGTGACA--GACTTTCAACA-----AA------------------------ATGAAACGTGTGTTAAAATGTTGAAGGTCGCCGCAAATGAAC----------------TATGACGTCAGTATGATTTTGCATTGTAATTGCGTGTAATGGATCTGACTGTT--T--------------T----------TG-------------------T-TTTA------AA-CCATTTTCAGATATTGGTACGCGAATA--GCTA-ACATATAATGTTTTGTTGTTGGTTATTGATTTAAAGC-AAAGAA-----GTAAAAAAATCTGAGAGAAATTATT------GAGAA-AAAATAATTCCATT--ACGGACTAC-TTTTTGTTGTAATTGTTT
gi|5 : gt------CTA-----CT--TTTTGTTGTAATTGTTTACCAGGTAGCCTGGACGTCGTTTTGAAGTATTTTTTATCCCTCAAATaccaggtagcctggacgtcgttttgaagtattttttatccctcaaatg
gi|6 : gtcacaaccagtctatatgactgcaacaacttaatacatatttggtcgtatagatcagtagtttgtaagaaatgccgtcggggtaaacaagctccaatctataatgctatgcatgactaactctgctggtatctgacaagaaactgacaaaccagtgcccaaacatatttgattcagaaactgaagacaacaatgttcctgcaaatcacatcatgcaaatatccggtcacaaaacttgtcctctgtgaataactaatgtcgcatcaacgagaatcagcatacagaaatttcaaaagtttacactcgaacaaaacaaataagccaattccccatgctcaaaatgttcgcaagttattcacaggtcaactcatatagagcatggaatcgtcatctcatgtcaacgtgatcggtggaatccagagcattttcggtgctcagactcataaaggtacatttaatgtacaagttaatcaaaccaaaaacagttccccgcgaaaacaaccaattagtaagagaattcgactcattattgacagtgacagactttcaacaaaatgaaacgtgtgttaaaatgttgaaggtcgccgcaaatgaactatgacgtcagtatgattttgcattgtaattgcgtgtaatggatctgactgtttttgttttaaaccattttcagatattggtacgcgaatagctaacatataatgttttgttgttggttattgatttaaagcaaagaagtaaaaaaatctgagagaaattattgagaaaaaataattccattacggaACTAGAAACTGACAAACCACAGTGCCAGAGAATATTTGATTCAGAAACCGAACGAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGTTCACAA--AAAT-ATATCCTCTGTAAATAACTACTGTCA-TATCAACATGAA---C----------------CAGCATAAAGAAATTTATAAAAGTTAACATTTACAAAACAAAAATATGCTGATTCCGCATAATTCAAATGCTTA----------------------------CAGGTCAACTCGAAGTCTTT-AAACACGGCACAGTCAACT---ATCAACGTCATCGGTG--A---AAAGTAGGTT-CGGTGCTGA-AATCCATGGAAATACATT-AGTATAAAAGTAAACAAAGTTAAAAGCATTTCGCTGCTACGTCAACCAACTA-ATAGAGAATTAAGACCCATTGTTGACAGTGACACTGACT---AGCG-----A-TAAAACACGATTCCCGTACATACGCTCGTACGTGTGTTTAAACATTGAATACCGCGGCATATGAACTATGCCGAATGTACAGTATGACATCAGTTTGGTTTAACGTTGTAATCTCA------------------------------------C----------TG-------------------T-----------------TTTTCAGATATTGGTTCGCTAATT--GATA-AATTATAGTGATTT-TTGTTGGTTATTGATTTGAAGAAAAACAAAATTGATAT-AAAATATGAGAGAAAATATT------TATAA-CATTAAATGCTTTT--ACGGACCG----TTTGTTACCTTTGTTTTAATAAATGGTAACCGAATTGCAC------CTA-----CT--TTATGTTAT------TTACAAGGTAGCCAGGCCGTCGCTTTG-ATTTTTTTTC-TCCTTCAAATg
gi|7 : GATTCGCTACTT------TGGTTAA-TTA--AAAACATTGTGATACAGACACAGGAATAGAG-TT-----------------------------T-GAAG-CG--GA-----G------AGAC--TAACAATTGTAGC-GGA-GGCGGTGACAATCCGAAAAATATTCGTCTTGTCTGACCTTA----GCTTT-GGCAAATATAAC---AGATTCTTTC-AATGTCCTGTACGTGTTTACG--GTAGAT-----------ACCACTGAATTATTCCGA------CACGCTCATT--CGAAATCACTGCTACAACTAAATACTTACCTGATCCTCTAGATCGATGGTTCGATGAgt
gi|7 : ATGACTAAATCTTTTGGTATCATAACGGACAAGAAACTGACAAACCACAGTGCCAGGAAATATTTGCTTCAGAAATTGAATGAC-AA----------ACAAAATCAACTCATGCAAATTACCGGTTACTA--AAAC-ATGTCCTATGAGAATAATTACTGTCA-CATCAACGAGATT--C----------------TAACAT-------TTTA----------GACTCAAACGACACACAAATGCCAATTACACATGCTCCAAATGCTCAGCAG--CAC-ACAA------ACTATTCACAGATCAA-----A-TCTA-----------ATCGCCGGCTCATGTCAACGTGACCTG-GTAATTCAAATCATTTT-CGGTGCTGA-AATTCACAAAGGTACATTTTATAT-CGTATAAACCAAGTTAAAATCAGCTCCCCGCCACAGCAACAAATTAGAA----AATTC-GACTCATTGTTGACAGTGGCActaaatcttttggtatcataacggacaagaaactgacaaaccacagtgccaggaaatatttgcttcagaaattgaatgacaaacaaaatcaactcatgcaaattaccggttactaaaacatgtcctatgagaataattactgtcacatcaacgagattctaacattttagactcaaacgacacacaaatgccaattacacatgctccaaatgctcagcagcacacaaactattcacagatcaaatctaatcgccggctcatgtcaacgtgacctggtaattcaaatcattttcggtgctgaaattcacaaaggtacattttatatcgtataaaccaagttaaaatcagctccccgccacagcaacaaattagaaaattcgactcattgttgacagtggca
gi|8 : gattcgctactttggttaattaaaaacattgtgatacagacacaggaatagagtttgaagcggagagactaacaattgtagcggaggcggtgacaatccgaaaaatattcgtcttgtctgaccttagctttggcaaatataacagattctttcaatgtcctgtacgtgtttacggtagataccactgaattattccgacacgctcattcgaaatcactgctacaactaaatacttacctgatcctctagatcgatggttcgGACAAGAAACTGGCAAACCACAGTACCAGAAAATATTTGCTTCAAAAATTGAATTAC-AACAATGTT---ACAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-AT--CCTATGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAAAAT-------TTTA----------CACTCGAACAACATAACTTTGCCAATTC--------------GTTCAGTAG--TGC-ACAT------ATTATTCACAGTTCAAATCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAATGTGACCAGTGTAATCCAAAGCATTTT-CTGTGCTTA-AATTCACAGAGGTACATTCAATGTGCATAAAAACCAAGTTAAAAGCAGCTCGCCGCCACAGCAACAAATTAAAAAGAAATTTC-GACACAATGTTGACAGTTACACTGATGCTC---------AATAACACATGATTC--------ACAA
gi|9 : ----------CACTCAAACAACACATACATGCCAATTCTACATGCTCCAAATGTGCCGCAG--CAC-AC----------TATTCACAGATCATCTCAAACTCTAT-AAACACGGCATCGCCAGCTCATATCAACGTGAATTTTGTAAATCAAAGCATTTT-TGGTGCTCA-ACTTCATGGAAGTACATTCAAT-TACATGTAAATCAAGTTAAAAGCAGTTCCCCACCGCAGCAACAAATAAGAAAGATAATTT-CACTCATTGTTGACAGTGACAC-GACCCTC---------AATAAAACAC-AT----------------------GTGTTAAAACATTGAAGATCGTGGTATATGAACTATGACATAGGTACTGTATTAAGTC----TGGTGTTGCATTGTAATCGCATG----------------T--T--------------T----------TGGA-----------------TGT---------AA-CTTTTTTT--GTTTTG----AATTATTAAATTA-AAAAATAGTGTTTTGTT--------TTGATTTAAAG--AAAatgtatgagaaggctatatgtcacatatgtatgggaaggctatatgtcacatatatatgggaaggctatatgtcacatatatatgaaaaaataaaacatttacatattagtaaaatatgtacatgtttatgt
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 3333 1111 7777777777777777777 222222 44444444444 333333333333333333333333333333333333333333333333333333333333 2222222 2222 111 3333 11 5555555555555555 1111111 1111111111 222222222222222222 44444444444444444 111111111 333333333333333333333333333333333333333333333333333333333333333333333333333333 1 11111 1111111 111111 11111 111111
lowQualScore : 3333 3 0 7777 88 1 1111111111111111111 3 333333 0 11111111111 6 11 8 999999999999999999999999999999999999999999999999999999999999 2 7777777 0 11 3 0 0 1111 2 777 55 0 66 1 2 4 0 0 2 5555 11 1 1 3 5 2 2 5 4 5 1 7 5 66 4 2 4 55 1111111111111111 4 3333333 5555555555 0 1 1 777777777777777777 33 5 3 0 1 4 1 3 0 3 0 0 2 1 2 4 22222222222222222 1 777777777 4 0 5 1 0 22 111111111111111111111111111111111111111111111111111111111111111111111111111111 44 0 44 0 1 66 4 0 1 0 0 22222 9 2 5555555 4 55 4 111111 11111 66 222222 0 1 3 2 4
lowQualScore : .... . . .... .. . ................... . ...... . ........... . .. . ............................................................ . ....... . .. . . . .... . ... .. . .. . . . . . . .... .. . . . . . . . . . . . . .. . . . .. ................ . ....... .......... . . . .................. .. . . . . . . . . . . . . . . . ................. . ......... . . . . . .. .............................................................................. .. . .. . . .. . . . . . ..... . . ....... . .. . ...... ..... .. ...... . . . . .
lowQualScore : 2222 2 2 0000 88 0 8888888888888888888 2 000000 8 88888888888 0 88 0 777777777777777777777777777777777777777777777777777777777777 5 0000000 2 00 5 2 2 2222 5 555 88 2 88 0 5 2 2 2 5 5555 00 4 4 7 7 2 2 4 4 7 7 4 1 11 4 7 4 55 5555555555555555 9 0000000 9999999999 2 5 3 555555555555555555 22 1 6 5 2 2 4 6 4 6 8 9 7 0 4 0 99999999999999999 9 000000000 1 2 9 1 1 55 111111111111111111111111111111111111111111111111111111111111111111111111111111 55 1 99 1 0 11 4 9 4 1 0 55555 8 6 6666666 0 55 0 555555 11111 11 888888 7 4 4 6 4
consensus : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAATA---------TAGTGTATCGCCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAATAGAG-TT-G--A--G-GGAGAGACTGATAATTGTACC-GAGG-CG--GA-----GTACCGGAGGCG-TGACAATTGTA-C-GGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAA-----CG-AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-TTATTTTCAGATATTGGTACGNTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG-AAAACAA-----GTATAAAAATCTGAGAGAAAANATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
Reference ( family-4736 ) : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAATA---------TAGTGTATCGCCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAATAGAG-TT-G--A--G-GGAGAGACTGATAATTGTACC-GAGG-CG--GA-----GTACCGGAGGCG-TGACAATTGTA-C-GGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAA-----CG-AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-TTATTTTCAGATATTGGTACGNTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG-AAAACAA-----GTATAAAAATCTGAGAGAAAANATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
gi|1 : TACGCGCTATCAAATAATTAAAGCAAACATGGTTGATC-TAATTTTCCGAGTCGGTAATTCGATCAGTGCAAATTGATGGGAAAGGCATGGGCGTTGTGACTGAAATACTAGTCTAGTAGTGTATCGGCAATTTGCTACTT------TGGTCAAACTATAGA-----TGAGATGCGGACATAGAAATAGAG-TT-AGAA--GCGGAGAGACTGACAATTGTACC-GGGGGCGATGACAATTGTACCGGGGGCGGTAGCAATTGTA-CCGGG-GGCGATGGCATTTCGAAAAGTATTCGTGTCGTCCGACTTTA----GCTTTGGGCAAATACAGC---AGAATCTTTCAAATGTCCTGTGCGTGTTTACAATGTAGATGCTCGGAAGAGACCACTGACCTATTCCGAGC-C--GACACACACTTACTATATCGCAGCTACAATTAAGCACTTACTTCGTCCTCTGGATCAATGGTTTG-TGAAAAATGCCTTACGGATGAACAAGCTCCAATCTATGACGACACACATGACTAAATC----------ACAACAAATAAGACATTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAATTGAATAAA-AACAATATTTCGGCAAATTCACATCATGCAAATATC-GGTCACTT--TAAC-ATTTCCTCTGTAAATAACTACTGTCA-TATCAACGCGAAT--C----------------CAACAT-------TTTA----------CACTCAAACGACACAAATATGCTAATTCCACATGCTCCAAATGTTCACCAG--CAC-ACAT------ACTATTCACAGGTAAACTCTAACTTTTT-GACCACGGCATCACCAGCTCATGTTAACGTGACCGGTGTAATCAAAAGCATTTTACGGTGCTCA-AATTTACGGCGATACATTCAATGTAAATGTAGAACAAGTTCAAAGCAG-TCCCCGCGACAGCAACAATTTAGAAAGAAAATTC-CACTTATTGTTGACAATGACACTGACTCTCAATGCTTTG-AATAAAACACGATTC--------ACCATCACATACGCGTT-AAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTATATGACGTCAGTATGATGTTGCAGTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-AAAAAATCAAATATATATACGGTTATT--ACTA-AGATATAGTGTTTTGTTGTTTGTTATTGATTT-AAG-GAAACAA-----GCATAGAAATAAGAGAGAAAAGATT------GATAATAATAAAAAAAATTT--ACGGACT-C-TTTTTCATGCATTTATTTTAATGAATAGTAACCGAATTACAC------CCA-----AT--TCATGTTGT------TTACAATGTAGTCAGACTGTTGCTTTGAAGTTTTTTTC-TGCCTCAAAT
gi|10 : TTCG-TGAGAAATGCCGTCGGGGTAAACAAGTTCCAATCTATGATAGCAAGCATGGCTAAATCTGCTGGTATCACAGCCGACAAAAATCTGAGAAATCACAGTGACAGAAAATATTTGATTCAGAAACTGAGCAACAAACATTGTTCCTGC-AAATCACATCATGTAAATATCCGGTCACAA--AAAC-ATATCCTCTGTTAATAACAACTGTCA-CATCAACGAAAAT--CAGCATAAAAAAAATCACAAAAT-------TTTA----------CACTCGAACAACACAAATATGCCTATTCCTTAGGCTCCAAATGTTCAGAAG---GCTGTGT------ATCATTTACAGGTTAACTCGAACTCTGT-GAACTCGACGTCGCCAGCTCTTATCGACGTGATCGGGGGAACCCAAAGCATTTT-AAGTGCTCA-AATT
gi|11 : T--C----------------CAAGAG-------TGTA----------CACTCAAACGACGTAATCATACCAATTCCACATGCCCCATATGTTAAGCAG--CGC-ACAT------A-----CACAGGTCAACTCGCAATATAC-AGTCACAGCATCGTCAGCTCATGTCGACGT-------------CAAAACATTTT-CGGTACTTACAATT
gi|11 : cagcacaaagtaagtCATATCAACCATTCAGAAAGATAATTT-GACTCAT------------CACTGACTCTCAA----------TAGTACACAATTT--------TCTATCATACATGTGTTTAAAAATTGAATTTTACGAC-TATGACGTAC-ATGTGGGTACCGTATTACGTAAGTATGGTGTTGTATTGTTATCGCGTG----------------T--TTTTAC---------T----------TG-------------------T-TTATATTTTGAA-TTATGTTCAGACATTGTTACGTTTACT--GCTT-AAACATAaaatgtcaaacatatcaaccattcagaaagataatttgactcatcactgactctcaatagtacacaattttctatcatacatgtgtttaaaaattgaattttacgactatgacgtacatgtgggtaccgtattacgtaagtatggtgttgtattgttatcgcgtgtttttacttgtttatattttgaattatgttcagacattgttacgtttactgcttaaacataa
gi|12 : cagcacaaagtaagttccaagagtgtacactcaaacgacgtaatcataccaattccacatgccccatatgttaagcagcgcacatacacaggtcaactcgcaatatacagtcacagcatcgtcagctcatgtcgacgtcaaaacattttcggtacttacaattaaatgtcaaaGTGTGTTTTTCCATTGTTATCACGTG----------------T--T--------------T----------TGGAT----------------C-T---------AA-CTGTTTTa
gi|12 : TG----------------T--T--------------T----------T----------------------T---------AA-TTATTTTCAGATATTTGTACAATTATT--TCTA-AAATATAGTCTTTTGATGTTGGTTATGGATTTAAA---------------TATAATAATCTGTGA-------------------------------CT-T--ACGAACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACTGAAGTACAC------CTA-----CT--TTATGTTAT------TTAATAGGTAGCCTGGTCATC-----------TTTTTC-TCCCTCAAAttgttttttttgtttttaattattttcagatatttgtacaattatttctaaaatatagtcttttgatgttggttatggatttaaatataataatctgtgacttacgaactactttttgttgcatttgtttcaatgaatggtaactgaagtacacctactttatgttatttaataggtagcctggtcatctttttctccctcaaa
gi|13 : gtgtgtttttccattgttatcacgtgttttggatctaactgttttttgtttttttAATTC----AGTGCAAATATTTGGAAATGCCAT---CGTATCGACTGAAAT-------------------------TCGCTATTT------TGGTCAAACTA---------TGTGATACGGACAT-GAAAT-----TT-----------AGAAATTGAGAGTT----T-GAAG-CG--AA-----G------AGAC--TGACAATTGTA-T-AGGAGGCGGTGATAATCCGAAAAATGTTAGTCTCGTCCGACCTTAGCCGGCTTTGGAAAAATACAGT---AGATTCTTT-AAATGCCCGGTCCGTGTTTGCA
gi|14 : aaaGCTGTCAAAAAATCAAAACAAACATGGTTG----TA--------AGTCAGTAATTC----AGTGCAAATT-----GAAAGGCATGGGC------ATTGAA--A---------TAGTGAATTGCCGATTCGCTACTT------TGGTCAAAC----AA-----TGTGATACGGACATAGATAAAGAGTTT-GT-A--GTGGAGAGACTGATAATT-T---------------------TACCAGAGGCGTTGACAATT-----------------------CGAAAAATGTTTGTCTCATCCGACCTTA----CTTTTGGGCAA
gi|15 : atggTACGCGCTGTCAAAAAATCAAAACAAACATGGCTAA-CATAATTTTCCGTTTCAGTAATTC----AGTGTTAATTGCTGGGAAAGGCCTGTGCGTTGTGACTAAAATA---------GA--GTATCGTGGATTTGCTATTTTTTATATGGTCAAACT----A-----TGTGATATGGACATTGAAAGAGAG-TTCG--ATTA-GGAGAGACTGGTTATTGCACCTGAGG-C
gi|16 : AACAA-----GTA-AAAAATCTGCGAGAAATTATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCAATTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCTGGCCGTCGCTTTGGGGTATGTTTC-TCCCTCAAATtg
gi|17 : TGA-AATAAAATTCCTTTGTACAAAGTTC-GTTTTGTTGCATTTGTTTCAATGAACTGTAACCGAAGAACAC------CTA-----CT--TCATGTTGA------TTACCAGGTAGCCTGGCCGTTGCTTTGAAGTCATTGTC-ATCCTCAAATg
gi|18 : tCTGTAAAAAACTCAAAACAAACATGGTTGG-CCTAATTTTCCAAGTCGGTAATTC----AGTGCAAATTGGTGGGAAAGGCATGGGCGTTGTGGCTGA-------------------ATCTCCGATTCGCAAC
gi|19 : GAGAGAAAAGATT------AATAT-ATTAAA-TTCCTTT--ATGGACTAA-TTTTTGTTGCATTTGTTTCAATCAATGGTAA-----------------------------TCA---TGT------TTACCACGTAGCCAGGCCATCGCTTTG
gi|2 : AAATACAGCTGCAGATTCTTTCAAATGTCCTGTGCGTGTTTGAAAAGTACATGCTCAGAAGAACCCATTGAACTATTCTGAGCCGT-CACACCCATT--TTATATCGCTGCAGCAACTAA-------CCCGGTCCTCTAGAGCAGTGGTCCG-TGAGAAATCTTGTCGGGGTAAAAAAGCTCAAATCTATGATGACTTGCATGACAAAATCTACTGGTATCACAACAGACACGACATTGACAAACCACAGTGGTAGAAAAGATTTGCTTTAAAACCTGAACGAC-AACAATGTTCCTG-----TCA-ATCATACAAATATCCGGTCACAA--AAAC-ACAGCATCAACGA-TAA------TCAGCATAAA--ACAATTTC----------------TAAAAT-------TTTA----------CGCTCGAACAACACAAATTTGCCAATTTCCCATGTTCTAAATGTTCAGCAGTACGC-ATATTATTCAATTATTCAAAGGTCAACTCGAATTCTAT-GAACACGGCCTCGTCAGCTCATGTGGAAGTGACCGGCGGAATACAAAGCATTTT-CGGTTCTCA-AATTCATGGAGGTACATTCAATGTACATGTAAATCAAGTCAAAACCAGTTATCCACCACAGCAACCAATTAGAAAGAGAATAC-GACTCACTGTTGACAGTGACACTGAC-----G-----TGAAACAAAATACGAATC--------GCAATCACACGCGTTTTTAAATATCGAAGATCGCAGCATATAA--TCTGACAGAGGTACTGCATCACGTTAGTATGGTGTTGCGTTAAAATCGCGTG----------------TAATAGATCTAACTGTTAT----------TG-------------------T-TTTC------AA-TTATTTTCATATATTGGCACACTTATT--GCTT-GCATAAAGTGTTTTGTTGCTGGTTATTAGTTTAAAG-AAAACAA-----GTATAAAAATCAGGGAGAAAATACT------AATAA-AATAAAATTCCTTT---TGAACTAC-TTTTTGTTGCTAATGATTCAATGAATGTTAACCGAATTACAC------CT
gi|20 : TACTAAGAAGCTAG-CCGTTGCTTTGAAGTATTTTAA-TCCCTCAAGT
gi|3 : CAATGTATATGCTCAGAAGAGACCTAAGAACTATTCCGAGC-AGACATACCCATT--CTAATTCGCTGGTACAACCCAGCCCTTAACTGGTTCCCTGGATCAATA--TC-------AA----------GTATACTAGCTCCAATATATGAACACATGCAT-ACTATATCTGCAGGTACTACAACAGACAAGAAACTGACAAACTACATTGCCAGAAAATATTTGCTTCGAAAATTAAATGAC-AACAATGTT---GCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCGCCTGTGAATAATTACTGTCA-CATCAACGAGAAT--C----------------CAACAT-------TTTA----------CACTCAAACAACACAAAT--------TCCACATGCTCCAAATGTTCAGCAG--CAT-ACAT------ATTATTCACAAGTCAACTCAAACTCTAT-GAACACGGCATCAACAGTTCATGTCAACGTGACCGGTGTAATCCAAATCATTTT-TGGTGCTTA-AATTCACGGAGGTACATTCAATG---AT---AACCAGGTTTAAGGCAGCTCCCCGCCACAGCAGCAAATTAGAAAGACATTTC-GACTC-------------ACACTGACACTCAA-----C-----AAAACACAATTC--------ACAAACACACGCGTGTTAAAACATTGAAGGTAGCGGTATATGAACTATGACATAGGTACTGTATGACGTCAGTATGGTGTTGCATTTTAATCGCGTG----------------T--T--------------T----------TGAATCTAACTGTTGTTTTTTT-T---------AA-TTTTTTTCTGATATCGGTACGCTTATT--GCTA-AAATATAGTGTTTTATTGTTGGTTATTGATTTAAAGAAAAAGAA-----GTTAAAAAATCTGAGAGAAAAAATT------TAAAA-AATGAAATTCTTTT--ACGGACTACTTTTTTGTTTCATTTGTTTCAATGAATGGTAACCGAGTTACACCTTAGGCTA-----CT--GTATGTTGT------TTACTAGGTAGCCAGGATGTCGCTTTGCAGTCTTTTTC-TCCCTCAAATtag
gi|4 : CAACTAAGCATTTACCTGGCCCTCTGTATCAATGGTTCG-TAAGAAATGCCGTCGGGGTAAACTAGCTCCAGTTGATGACGACACGCATGACTTAATCTGCTGGTATCACAACAGACTGGAAACTGACAAACCTCAGTGCCAGAAAATATTTGCTTCAGAAATTCA------AACATTATTCCTGCAAAATCACATCATGCAAATATCCGGTCACTAACAAATAATATCCTCTGTGAATATCTGCTGTCA-CATCAACGAGAAT--C----------------CAA----------TTTA----------TACTCAATCAATACAATCGTGCCAATTCCATATGCACAAAATGTTTAGCAG--CAC-A------------------AG------------TCTAT-GAACACGGCGTTGCCAGTTCATGTCAACGTTACCTGTGTAATCAAAAGCATGTT-CGGTGTTTA-AATTCACGGAGGTACATTCAATGTACATGTA----AAGTTAAAAGCAGCTCCCCGCCACATTAG-GAGTTGAAAAGATAATTC-CA-TCCTTGTTTACCGTGACACTGACTCT--A-----T---ATAAAACACGATTC--------ACCACCACACGCGTGTTGAAACATTGTAGATCGCAGCATATGAACTATGAATTTGGTTCTTTATGACGTCAGTGTGGTGCTGCATTTTAATCACCTG----------------T--T--------------TAGGTTCTAAATGATTTTGTT-----------T-T---------AATTTATTTTC--ATATCGGTATTGTTATT--GCTATATATATAGTGTTTTTATGATGTTT-TTTATTTAA---AAAACAA-----GTA-AAAAA-CTAAGAGAAAAGATTCAATGAAATAA-AATAAAACTCCTTT--ACGGACTAC-TTTTTGTTTCATTCGTTCCAATGAATTGTAACCGAATTACAC------CTAATAACCTAATCGTAATGT------TGACTAGGTAGTCAGGCCGTCGCTTTGAAGAATTTTTC-TCTCTCAAAT
gi|5 : cg--CACAACCAGT--CTATATGACTGCAACAACTTAATACATATTTGGTCGTATAGATCAGTAGTTTG-TAAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATAATGCTATGCATGACTAACTCTGCTGGTATCT-----GACAAGAAACTGACAAACCA--GTGCCCAAACATATTTGATTCAGAAACTGAA-GAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGGTCAC-A--AAAC-TTGTCCTCTGTGAATAACTAATGTCG-CATCAACGAGAAT--CAGCATACAGAAATTT-CAAAAG-------TTTA----------CACTCGAACAAAACAAATAAGCCAATTCCCCATGCTCAAAATGTTC-GCAA----------------GTTATTCACAGGTCAACTCA-----TATAGAGCATGGAATCGTCATCTCATGTCAACGTGATCGGTGGAATCCAGAGCATTTT-CGGTGCTCA-GACTCATAAAGGTACATTTAATGTACAAGTTAATCAAACCAAAAACAGTTCCCCGCGAAAACAACCAATTAGTAAGAGAATTC-GACTCATTATTGACAGTGACA--GACTTTCAA-----CA-AA------------------------ATGAAACGTGTGTTAAAATGTTGAAGGTCGCCGCAAATGAAC----------------TATGACGTCAGTATGATTTTGCATTGTAATTGCGTGTAATGGATCTGACTGTT--T--------------T----------TG-------------------T-TTTA------AA-CCATTTTCAGATATTGGTACGCGAATA--GCTA-ACATATAATGTTTTGTTGTTGGTTATTGATTTAAAG-CAAAGAA-----GTAAAAAAATCTGAGAGAAATTATT------GAGAA-AAAATAATTCCATT--ACGGACTAC-TTTTTGTTGTAATTGTTT
gi|5 : gt------CTA-----CT--TTTTGTTGTAATTGTTTACCAGGTAGCCTGGACGTCGTTTTGAAGTATTTTTTATCCCTCAAATaccaggtagcctggacgtcgttttgaagtattttttatccctcaaatg
gi|6 : gtcacaaccagtctatatgactgcaacaacttaatacatatttggtcgtatagatcagtagtttgtaagaaatgccgtcggggtaaacaagctccaatctataatgctatgcatgactaactctgctggtatctgacaagaaactgacaaaccagtgcccaaacatatttgattcagaaactgaagacaacaatgttcctgcaaatcacatcatgcaaatatccggtcacaaaacttgtcctctgtgaataactaatgtcgcatcaacgagaatcagcatacagaaatttcaaaagtttacactcgaacaaaacaaataagccaattccccatgctcaaaatgttcgcaagttattcacaggtcaactcatatagagcatggaatcgtcatctcatgtcaacgtgatcggtggaatccagagcattttcggtgctcagactcataaaggtacatttaatgtacaagttaatcaaaccaaaaacagttccccgcgaaaacaaccaattagtaagagaattcgactcattattgacagtgacagactttcaacaaaatgaaacgtgtgttaaaatgttgaaggtcgccgcaaatgaactatgacgtcagtatgattttgcattgtaattgcgtgtaatggatctgactgtttttgttttaaaccattttcagatattggtacgcgaatagctaacatataatgttttgttgttggttattgatttaaagcaaagaagtaaaaaaatctgagagaaattattgagaaaaaataattccattacggaACTAGAAACTGACAAACCACAGTGCCAGAGAATATTTGATTCAGAAACCGAACGAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGTTCACAA--AAAT-ATATCCTCTGTAAATAACTACTGTCA-TATCAACATGAA---C----------------CAGCATAAAGAAATTTATAAAAGTTAACATTTACAAAACAAAAATATGCTGATTCCGCATAATTCAAATGCTTA----------------------------CAGGTCAACTCGAAGTCTTT-AAACACGGCACAGTCAACT---ATCAACGTCATCGGTG--A---AAAGTAGGTT-CGGTGCTGA-AATCCATGGAAATACATT-AGTATAAAAGTAAACAAAGTTAAAAGCATTTCGCTGCTACGTCAACCAACTA-ATAGAGAATTAAGACCCATTGTTGACAGTGACACTGACT---AG-----CG-A-TAAAACACGATTCCCGTACATACGCTCGTACGTGTGTTTAAACATTGAATACCGCGGCATATGAACTATGCCGAATGTACAGTATGACATCAGTTTGGTTTAACGTTGTAATCTCA------------------------------------C----------TG-------------------T-----------------TTTTCAGATATTGGTTCGCTAATT--GATA-AATTATAGTGATTT-TTGTTGGTTATTGATTTGAAGAAAAACAAAATTGATAT-AAAATATGAGAGAAAATATT------TATAA-CATTAAATGCTTTT--ACGGACCG----TTTGTTACCTTTGTTTTAATAAATGGTAACCGAATTGCAC------CTA-----CT--TTATGTTAT------TTACAAGGTAGCCAGGCCGTCGCTTTG-ATTTTTTTTC-TCCTTCAAATg
gi|7 : GATTCGCTACTT------TGGTTAA-TTA--AAAACATTGTGATACAGACACAGGAATAGAG-TT-----------------------------T-GAAG-CG--GA-----G------AGAC--TAACAATTGTAGC-GGA-GGCGGTGACAATCCGAAAAATATTCGTCTTGTCTGACCTTA----GCTTT-GGCAAATATAAC---AGATTCTTTC-AATGTCCTGTACGTGTTTACG--GTAGAT-----------ACCACTGAATTATTCCGA------CACGCTCATT--CGAAATCACTGCTACAACTAAATACTTACCTGATCCTCTAGATCGATGGTTCGATGAgt
gi|7 : ATGACTAAATCTTTTGGTATCATAACGGACAAGAAACTGACAAACCACAGTGCCAGGAAATATTTGCTTCAGAAATTGAATGAC-AA----------ACAAAATCAACTCATGCAAATTACCGGTTACTA--AAAC-ATGTCCTATGAGAATAATTACTGTCA-CATCAACGAGATT--C----------------TAACAT-------TTTA----------GACTCAAACGACACACAAATGCCAATTACACATGCTCCAAATGCTCAGCAG--CAC-ACAA------ACTATTCACAGATCAA-----A-TCTA-----------ATCGCCGGCTCATGTCAACGTGACCTG-GTAATTCAAATCATTTT-CGGTGCTGA-AATTCACAAAGGTACATTTTATAT-CGTATAAACCAAGTTAAAATCAGCTCCCCGCCACAGCAACAAATTAGAA----AATTC-GACTCATTGTTGACAGTGGCActaaatcttttggtatcataacggacaagaaactgacaaaccacagtgccaggaaatatttgcttcagaaattgaatgacaaacaaaatcaactcatgcaaattaccggttactaaaacatgtcctatgagaataattactgtcacatcaacgagattctaacattttagactcaaacgacacacaaatgccaattacacatgctccaaatgctcagcagcacacaaactattcacagatcaaatctaatcgccggctcatgtcaacgtgacctggtaattcaaatcattttcggtgctgaaattcacaaaggtacattttatatcgtataaaccaagttaaaatcagctccccgccacagcaacaaattagaaaattcgactcattgttgacagtggca
gi|8 : gattcgctactttggttaattaaaaacattgtgatacagacacaggaatagagtttgaagcggagagactaacaattgtagcggaggcggtgacaatccgaaaaatattcgtcttgtctgaccttagctttggcaaatataacagattctttcaatgtcctgtacgtgtttacggtagataccactgaattattccgacacgctcattcgaaatcactgctacaactaaatacttacctgatcctctagatcgatggttcgGACAAGAAACTGGCAAACCACAGTACCAGAAAATATTTGCTTCAAAAATTGAATTAC-AACAATGTT---ACAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-AT--CCTATGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAAAAT-------TTTA----------CACTCGAACAACATAACTTTGCCAATTC--------------GTTCAGTAG--TGC-ACAT------ATTATTCACAGTTCAAATCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAATGTGACCAGTGTAATCCAAAGCATTTT-CTGTGCTTA-AATTCACAGAGGTACATTCAATGTGCATAAAAACCAAGTTAAAAGCAGCTCGCCGCCACAGCAACAAATTAAAAAGAAATTTC-GACACAATGTTGACAGTTACACTGATGCTC----------AATAACACATGATTC--------ACAA
gi|9 : ----------CACTCAAACAACACATACATGCCAATTCTACATGCTCCAAATGTGCCGCAG--CAC-AC----------TATTCACAGATCATCTCAAACTCTAT-AAACACGGCATCGCCAGCTCATATCAACGTGAATTTTGTAAATCAAAGCATTTT-TGGTGCTCA-ACTTCATGGAAGTACATTCAAT-TACATGTAAATCAAGTTAAAAGCAGTTCCCCACCGCAGCAACAAATAAGAAAGATAATTT-CACTCATTGTTGACAGTGACAC-GACCCTC----------AATAAAACAC-AT----------------------GTGTTAAAACATTGAAGATCGTGGTATATGAACTATGACATAGGTACTGTATTAAGTC----TGGTGTTGCATTGTAATCGCATG----------------T--T--------------T----------TGGA-----------------TGT---------AA-CTTTTTTT--GTTTTG----AATTATTAAATTA-AAAAATAGTGTTTTGTT--------TTGATTTAAAG-AAAACAatgtatgagaaggctatatgtcacatatgtatgggaaggctatatgtcacatatatatgggaaggctatatgtcacatatatatgaaaaaataaaacatttacatattagtaaaatatgtacatgtttatgt
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 3333 1111 7777777777777777777 222222 44444444444 333333333333333333333333333333333333333333333333333333333333 2222222 2222 111 3333 11 5555555555555555 1111111 1111111111 222222222222222222 44444444444444444 111111111 333333333333333333333333333333333333333333333333333333333333333333333333333333 1 11111 1111111 111111 11111 111111
lowQualScore : 3333 3 0 7777 88 1 1111111111111111111 3 333333 0 11111111111 6 11 8 999999999999999999999999999999999999999999999999999999999999 2 7777777 0 11 3 0 0 1111 2 777 55 0 66 1 2 4 0 0 2 5555 11 1 1 3 5 2 2 5 4 5 1 7 5 66 4 2 4 55 1111111111111111 4 3333333 5555555555 0 1 1 777777777777777777 33 5 3 0 1 4 1 3 0 3 0 0 2 1 2 4 22222222222222222 1 777777777 4 0 5 1 0 22 111111111111111111111111111111111111111111111111111111111111111111111111111111 44 0 44 0 1 66 4 0 1 0 0 22222 9 2 5555555 4 55 4 111111 11111 66 222222 0 1 3 2 4
lowQualScore : .... . . .... .. . ................... . ...... . ........... . .. . ............................................................ . ....... . .. . . . .... . ... .. . .. . . . . . . .... .. . . . . . . . . . . . . .. . . . .. ................ . ....... .......... . . . .................. .. . . . . . . . . . . . . . . . ................. . ......... . . . . . .. .............................................................................. .. . .. . . .. . . . . . ..... . . ....... . .. . ...... ..... .. ...... . . . . .
lowQualScore : 2222 2 2 0000 88 0 8888888888888888888 2 000000 8 88888888888 0 88 0 777777777777777777777777777777777777777777777777777777777777 5 0000000 2 00 5 2 2 2222 5 555 88 2 88 0 5 2 2 2 5 5555 00 4 4 7 7 2 2 4 4 7 7 4 1 11 4 7 4 55 5555555555555555 9 0000000 9999999999 2 5 3 555555555555555555 22 1 6 5 2 2 4 6 4 6 8 9 7 0 4 0 99999999999999999 9 000000000 1 2 9 1 1 55 111111111111111111111111111111111111111111111111111111111111111111111111111111 55 1 99 1 0 11 4 9 4 1 0 55555 8 6 6666666 0 55 0 555555 11111 11 888888 7 4 4 6 4
consensus : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAATA---------TAGTGTATCGCCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAATAGAG-TT-G--A--G-GGAGAGACTGATAATTGTACC-GAGG-CG--GA-----GTACCGGAGGCG-TGACAATTGTA-C-GGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAA-----CG-AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-TTATTTTCAGATATTGGTACGNTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG-AAAACAA-----GTATAAAAATCTGAGAGAAAANATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
Reference ( family-4736 ) : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAATA---------TAGTGTATCGCCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAATAGAG-TT-G--A--G-GGAGAGACTGATAATTGTACC-GAGG-CG--GA-----GTACCGGAGGCG-TGACAATTGTA-C-GGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAA-----CG-AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-TTATTTTCAGATATTGGTACGNTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG-AAAACAA-----GTATAAAAATCTGAGAGAAAANATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
gi|1 : TACGCGCTATCAAATAATTAAAGCAAACATGGTTGATC-TAATTTTCCGAGTCGGTAATTCGATCAGTGCAAATTGATGGGAAAGGCATGGGCGTTGTGACTGAAATACTAGTCTAGTAGTGTATCGGCAATTTGCTACTT------TGGTCAAACTATAGA-----TGAGATGCGGACATAGAAATAGAG-TT-AGAA--GCGGAGAGACTGACAATTGTACC-GGGGGCGATGACAATTGTACCGGGGGCGGTAGCAATTGTA-CCGGG-GGCGATGGCATTTCGAAAAGTATTCGTGTCGTCCGACTTTA----GCTTTGGGCAAATACAGC---AGAATCTTTCAAATGTCCTGTGCGTGTTTACAATGTAGATGCTCGGAAGAGACCACTGACCTATTCCGAGC-C--GACACACACTTACTATATCGCAGCTACAATTAAGCACTTACTTCGTCCTCTGGATCAATGGTTTG-TGAAAAATGCCTTACGGATGAACAAGCTCCAATCTATGACGACACACATGACTAAATC----------ACAACAAATAAGACATTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAATTGAATAAA-AACAATATTTCGGCAAATTCACATCATGCAAATATC-GGTCACTT--TAAC-ATTTCCTCTGTAAATAACTACTGTCA-TATCAACGCGAAT--C----------------CAACAT-------TTTA----------CACTCAAACGACACAAATATGCTAATTCCACATGCTCCAAATGTTCACCAG--CAC-ACAT------ACTATTCACAGGTAAACTCTAACTTTTT-GACCACGGCATCACCAGCTCATGTTAACGTGACCGGTGTAATCAAAAGCATTTTACGGTGCTCA-AATTTACGGCGATACATTCAATGTAAATGTAGAACAAGTTCAAAGCAG-TCCCCGCGACAGCAACAATTTAGAAAGAAAATTC-CACTTATTGTTGACAATGACACTGACTCTCAATGCTTTG-AATAAAACACGATTC--------ACCATCACATACGCGTT-AAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTATATGACGTCAGTATGATGTTGCAGTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-AAAAAATCAAATATATATACGGTTATT--ACTA-AGATATAGTGTTTTGTTGTTTGTTATTGATTT-AAG-GAAACAA-----GCATAGAAATAAGAGAGAAAAGATT------GATAATAATAAAAAAAATTT--ACGGACT-C-TTTTTCATGCATTTATTTTAATGAATAGTAACCGAATTACAC------CCA-----AT--TCATGTTGT------TTACAATGTAGTCAGACTGTTGCTTTGAAGTTTTTTTC-TGCCTCAAAT
gi|10 : TTCG-TGAGAAATGCCGTCGGGGTAAACAAGTTCCAATCTATGATAGCAAGCATGGCTAAATCTGCTGGTATCACAGCCGACAAAAATCTGAGAAATCACAGTGACAGAAAATATTTGATTCAGAAACTGAGCAACAAACATTGTTCCTGC-AAATCACATCATGTAAATATCCGGTCACAA--AAAC-ATATCCTCTGTTAATAACAACTGTCA-CATCAACGAAAAT--CAGCATAAAAAAAATCACAAAAT-------TTTA----------CACTCGAACAACACAAATATGCCTATTCCTTAGGCTCCAAATGTTCAGAAG---GCTGTGT------ATCATTTACAGGTTAACTCGAACTCTGT-GAACTCGACGTCGCCAGCTCTTATCGACGTGATCGGGGGAACCCAAAGCATTTT-AAGTGCTCA-AATT
gi|11 : T--C----------------CAAGAG-------TGTA----------CACTCAAACGACGTAATCATACCAATTCCACATGCCCCATATGTTAAGCAG--CGC-ACAT------A-----CACAGGTCAACTCGCAATATAC-AGTCACAGCATCGTCAGCTCATGTCGACGT-------------CAAAACATTTT-CGGTACTTACAATT
gi|11 : cagcacaaagtaagtCATATCAACCATTCAGAAAGATAATTT-GACTCAT------------CACTGACTCTCAA----------TAGTACACAATTT--------TCTATCATACATGTGTTTAAAAATTGAATTTTACGAC-TATGACGTAC-ATGTGGGTACCGTATTACGTAAGTATGGTGTTGTATTGTTATCGCGTG----------------T--TTTTAC---------T----------TG-------------------T-TTATATTTTGAA-TTATGTTCAGACATTGTTACGTTTACT--GCTT-AAACATAaaatgtcaaacatatcaaccattcagaaagataatttgactcatcactgactctcaatagtacacaattttctatcatacatgtgtttaaaaattgaattttacgactatgacgtacatgtgggtaccgtattacgtaagtatggtgttgtattgttatcgcgtgtttttacttgtttatattttgaattatgttcagacattgttacgtttactgcttaaacataa
gi|12 : cagcacaaagtaagttccaagagtgtacactcaaacgacgtaatcataccaattccacatgccccatatgttaagcagcgcacatacacaggtcaactcgcaatatacagtcacagcatcgtcagctcatgtcgacgtcaaaacattttcggtacttacaattaaatgtcaaaGTGTGTTTTTCCATTGTTATCACGTG----------------T--T--------------T----------TGGAT----------------C-T---------AA-CTGTTTTa
gi|12 : TG----------------T--T--------------T----------T----------------------T---------AA-TTATTTTCAGATATTTGTACAATTATT--TCTA-AAATATAGTCTTTTGATGTTGGTTATGGATTTAAA---------------TATAATAATCTGTGA-------------------------------CT-T--ACGAACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACTGAAGTACAC------CTA-----CT--TTATGTTAT------TTAATAGGTAGCCTGGTCATC-----------TTTTTC-TCCCTCAAAttgttttttttgtttttaattattttcagatatttgtacaattatttctaaaatatagtcttttgatgttggttatggatttaaatataataatctgtgacttacgaactactttttgttgcatttgtttcaatgaatggtaactgaagtacacctactttatgttatttaataggtagcctggtcatctttttctccctcaaa
gi|13 : gtgtgtttttccattgttatcacgtgttttggatctaactgttttttgtttttttAATTC----AGTGCAAATATTTGGAAATGCCAT---CGTATCGACTGAAAT-------------------------TCGCTATTT------TGGTCAAACTA---------TGTGATACGGACAT-GAAAT-----TT-----------AGAAATTGAGAGTT----T-GAAG-CG--AA-----G------AGAC--TGACAATTGTA-T-AGGAGGCGGTGATAATCCGAAAAATGTTAGTCTCGTCCGACCTTAGCCGGCTTTGGAAAAATACAGT---AGATTCTTT-AAATGCCCGGTCCGTGTTTGCA
gi|14 : aaaGCTGTCAAAAAATCAAAACAAACATGGTTG----TA--------AGTCAGTAATTC----AGTGCAAATT-----GAAAGGCATGGGC------ATTGAA--A---------TAGTGAATTGCCGATTCGCTACTT------TGGTCAAAC----AA-----TGTGATACGGACATAGATAAAGAGTTT-GT-A--GTGGAGAGACTGATAATT-T---------------------TACCAGAGGCGTTGACAATT-----------------------CGAAAAATGTTTGTCTCATCCGACCTTA----CTTTTGGGCAA
gi|15 : atggTACGCGCTGTCAAAAAATCAAAACAAACATGGCTAA-CATAATTTTCCGTTTCAGTAATTC----AGTGTTAATTGCTGGGAAAGGCCTGTGCGTTGTGACTAAAATA---------GA--GTATCGTGGATTTGCTATTTTTTATATGGTCAAACT----A-----TGTGATATGGACATTGAAAGAGAG-TTCG--ATTA-GGAGAGACTGGTTATTGCACCTGAGG-C
gi|16 : AACAA-----GTA-AAAAATCTGCGAGAAATTATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCAATTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCTGGCCGTCGCTTTGGGGTATGTTTC-TCCCTCAAATtg
gi|17 : TGA-AATAAAATTCCTTTGTACAAAGTTC-GTTTTGTTGCATTTGTTTCAATGAACTGTAACCGAAGAACAC------CTA-----CT--TCATGTTGA------TTACCAGGTAGCCTGGCCGTTGCTTTGAAGTCATTGTC-ATCCTCAAATg
gi|18 : tCTGTAAAAAACTCAAAACAAACATGGTTGG-CCTAATTTTCCAAGTCGGTAATTC----AGTGCAAATTGGTGGGAAAGGCATGGGCGTTGTGGCTGA-------------------ATCTCCGATTCGCAAC
gi|19 : GAGAGAAAAGATT------AATAT-ATTAAA-TTCCTTT--ATGGACTAA-TTTTTGTTGCATTTGTTTCAATCAATGGTAA-----------------------------TCA---TGT------TTACCACGTAGCCAGGCCATCGCTTTG
gi|2 : AAATACAGCTGCAGATTCTTTCAAATGTCCTGTGCGTGTTTGAAAAGTACATGCTCAGAAGAACCCATTGAACTATTCTGAGCCGT-CACACCCATT--TTATATCGCTGCAGCAACTAA-------CCCGGTCCTCTAGAGCAGTGGTCCG-TGAGAAATCTTGTCGGGGTAAAAAAGCTCAAATCTATGATGACTTGCATGACAAAATCTACTGGTATCACAACAGACACGACATTGACAAACCACAGTGGTAGAAAAGATTTGCTTTAAAACCTGAACGAC-AACAATGTTCCTG-----TCA-ATCATACAAATATCCGGTCACAA--AAAC-ACAGCATCAACGA-TAA------TCAGCATAAA--ACAATTTC----------------TAAAAT-------TTTA----------CGCTCGAACAACACAAATTTGCCAATTTCCCATGTTCTAAATGTTCAGCAGTACGC-ATATTATTCAATTATTCAAAGGTCAACTCGAATTCTAT-GAACACGGCCTCGTCAGCTCATGTGGAAGTGACCGGCGGAATACAAAGCATTTT-CGGTTCTCA-AATTCATGGAGGTACATTCAATGTACATGTAAATCAAGTCAAAACCAGTTATCCACCACAGCAACCAATTAGAAAGAGAATAC-GACTCACTGTTGACAGTGACACTGAC-----G-----TGAAACAAAATACGAATC--------GCAATCACACGCGTTTTTAAATATCGAAGATCGCAGCATATAA--TCTGACAGAGGTACTGCATCACGTTAGTATGGTGTTGCGTTAAAATCGCGTG----------------TAATAGATCTAACTGTTAT----------TG-------------------T-TTTC------AA-TTATTTTCATATATTGGCACACTTATT--GCTT-GCATAAAGTGTTTTGTTGCTGGTTATTAGTTTAAAG-AAAACAA-----GTATAAAAATCAGGGAGAAAATACT------AATAA-AATAAAATTCCTTT---TGAACTAC-TTTTTGTTGCTAATGATTCAATGAATGTTAACCGAATTACAC------CT
gi|20 : TACTAAGAAGCTAG-CCGTTGCTTTGAAGTATTTTAA-TCCCTCAAGT
gi|3 : CAATGTATATGCTCAGAAGAGACCTAAGAACTATTCCGAGC-AGACATACCCATT--CTAATTCGCTGGTACAACCCAGCCCTTAACTGGTTCCCTGGATCAATA--TC-------AA----------GTATACTAGCTCCAATATATGAACACATGCAT-ACTATATCTGCAGGTACTACAACAGACAAGAAACTGACAAACTACATTGCCAGAAAATATTTGCTTCGAAAATTAAATGAC-AACAATGTT---GCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCGCCTGTGAATAATTACTGTCA-CATCAACGAGAAT--C----------------CAACAT-------TTTA----------CACTCAAACAACACAAAT--------TCCACATGCTCCAAATGTTCAGCAG--CAT-ACAT------ATTATTCACAAGTCAACTCAAACTCTAT-GAACACGGCATCAACAGTTCATGTCAACGTGACCGGTGTAATCCAAATCATTTT-TGGTGCTTA-AATTCACGGAGGTACATTCAATG---AT---AACCAGGTTTAAGGCAGCTCCCCGCCACAGCAGCAAATTAGAAAGACATTTC-GACTC-------------ACACTGACACTCAA-----C-----AAAACACAATTC--------ACAAACACACGCGTGTTAAAACATTGAAGGTAGCGGTATATGAACTATGACATAGGTACTGTATGACGTCAGTATGGTGTTGCATTTTAATCGCGTG----------------T--T--------------T----------TGAATCTAACTGTTGTTTTTTT-T---------AA-TTTTTTTCTGATATCGGTACGCTTATT--GCTA-AAATATAGTGTTTTATTGTTGGTTATTGATTTAAAGAAAAAGAA-----GTTAAAAAATCTGAGAGAAAAAATT------TAAAA-AATGAAATTCTTTT--ACGGACTACTTTTTTGTTTCATTTGTTTCAATGAATGGTAACCGAGTTACACCTTAGGCTA-----CT--GTATGTTGT------TTACTAGGTAGCCAGGATGTCGCTTTGCAGTCTTTTTC-TCCCTCAAATtag
gi|4 : CAACTAAGCATTTACCTGGCCCTCTGTATCAATGGTTCG-TAAGAAATGCCGTCGGGGTAAACTAGCTCCAGTTGATGACGACACGCATGACTTAATCTGCTGGTATCACAACAGACTGGAAACTGACAAACCTCAGTGCCAGAAAATATTTGCTTCAGAAATTCA------AACATTATTCCTGCAAAATCACATCATGCAAATATCCGGTCACTAACAAATAATATCCTCTGTGAATATCTGCTGTCA-CATCAACGAGAAT--C----------------CAA----------TTTA----------TACTCAATCAATACAATCGTGCCAATTCCATATGCACAAAATGTTTAGCAG--CAC-A------------------AG------------TCTAT-GAACACGGCGTTGCCAGTTCATGTCAACGTTACCTGTGTAATCAAAAGCATGTT-CGGTGTTTA-AATTCACGGAGGTACATTCAATGTACATGTA----AAGTTAAAAGCAGCTCCCCGCCACATTAG-GAGTTGAAAAGATAATTC-CA-TCCTTGTTTACCGTGACACTGACTCT--A-----T---ATAAAACACGATTC--------ACCACCACACGCGTGTTGAAACATTGTAGATCGCAGCATATGAACTATGAATTTGGTTCTTTATGACGTCAGTGTGGTGCTGCATTTTAATCACCTG----------------T--T--------------TAGGTTCTAAATGATTTTGTT-----------T-T---------AATTTATTTTC--ATATCGGTATTGTTATT--GCTATATATATAGTGTTTTTATGATGTTT-TTTATTTAA---AAAACAA-----GTA-AAAAA-CTAAGAGAAAAGATTCAATGAAATAA-AATAAAACTCCTTT--ACGGACTAC-TTTTTGTTTCATTCGTTCCAATGAATTGTAACCGAATTACAC------CTAATAACCTAATCGTAATGT------TGACTAGGTAGTCAGGCCGTCGCTTTGAAGAATTTTTC-TCTCTCAAAT
gi|5 : cg--CACAACCAGT--CTATATGACTGCAACAACTTAATACATATTTGGTCGTATAGATCAGTAGTTTG-TAAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATAATGCTATGCATGACTAACTCTGCTGGTATCT-----GACAAGAAACTGACAAACCA--GTGCCCAAACATATTTGATTCAGAAACTGAA-GAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGGTCAC-A--AAAC-TTGTCCTCTGTGAATAACTAATGTCG-CATCAACGAGAAT--CAGCATACAGAAATTT-CAAAAG-------TTTA----------CACTCGAACAAAACAAATAAGCCAATTCCCCATGCTCAAAATGTTC-GCAA----------------GTTATTCACAGGTCAACTCA-----TATAGAGCATGGAATCGTCATCTCATGTCAACGTGATCGGTGGAATCCAGAGCATTTT-CGGTGCTCA-GACTCATAAAGGTACATTTAATGTACAAGTTAATCAAACCAAAAACAGTTCCCCGCGAAAACAACCAATTAGTAAGAGAATTC-GACTCATTATTGACAGTGACA--GACTTTCAA-----CA-AA------------------------ATGAAACGTGTGTTAAAATGTTGAAGGTCGCCGCAAATGAAC----------------TATGACGTCAGTATGATTTTGCATTGTAATTGCGTGTAATGGATCTGACTGTT--T--------------T----------TG-------------------T-TTTA------AA-CCATTTTCAGATATTGGTACGCGAATA--GCTA-ACATATAATGTTTTGTTGTTGGTTATTGATTTAAAG-CAAAGAA-----GTAAAAAAATCTGAGAGAAATTATT------GAGAA-AAAATAATTCCATT--ACGGACTAC-TTTTTGTTGTAATTGTTT
gi|5 : gt------CTA-----CT--TTTTGTTGTAATTGTTTACCAGGTAGCCTGGACGTCGTTTTGAAGTATTTTTTATCCCTCAAATaccaggtagcctggacgtcgttttgaagtattttttatccctcaaatg
gi|6 : gtcacaaccagtctatatgactgcaacaacttaatacatatttggtcgtatagatcagtagtttgtaagaaatgccgtcggggtaaacaagctccaatctataatgctatgcatgactaactctgctggtatctgacaagaaactgacaaaccagtgcccaaacatatttgattcagaaactgaagacaacaatgttcctgcaaatcacatcatgcaaatatccggtcacaaaacttgtcctctgtgaataactaatgtcgcatcaacgagaatcagcatacagaaatttcaaaagtttacactcgaacaaaacaaataagccaattccccatgctcaaaatgttcgcaagttattcacaggtcaactcatatagagcatggaatcgtcatctcatgtcaacgtgatcggtggaatccagagcattttcggtgctcagactcataaaggtacatttaatgtacaagttaatcaaaccaaaaacagttccccgcgaaaacaaccaattagtaagagaattcgactcattattgacagtgacagactttcaacaaaatgaaacgtgtgttaaaatgttgaaggtcgccgcaaatgaactatgacgtcagtatgattttgcattgtaattgcgtgtaatggatctgactgtttttgttttaaaccattttcagatattggtacgcgaatagctaacatataatgttttgttgttggttattgatttaaagcaaagaagtaaaaaaatctgagagaaattattgagaaaaaataattccattacggaACTAGAAACTGACAAACCACAGTGCCAGAGAATATTTGATTCAGAAACCGAACGAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGTTCACAA--AAAT-ATATCCTCTGTAAATAACTACTGTCA-TATCAACATGAA---C----------------CAGCATAAAGAAATTTATAAAAGTTAACATTTACAAAACAAAAATATGCTGATTCCGCATAATTCAAATGCTTA----------------------------CAGGTCAACTCGAAGTCTTT-AAACACGGCACAGTCAACT---ATCAACGTCATCGGTG--A---AAAGTAGGTT-CGGTGCTGA-AATCCATGGAAATACATT-AGTATAAAAGTAAACAAAGTTAAAAGCATTTCGCTGCTACGTCAACCAACTA-ATAGAGAATTAAGACCCATTGTTGACAGTGACACTGACT---AG-----CG-A-TAAAACACGATTCCCGTACATACGCTCGTACGTGTGTTTAAACATTGAATACCGCGGCATATGAACTATGCCGAATGTACAGTATGACATCAGTTTGGTTTAACGTTGTAATCTCA------------------------------------C----------TG-------------------T-----------------TTTTCAGATATTGGTTCGCTAATT--GATA-AATTATAGTGATTT-TTGTTGGTTATTGATTTGAAGAAAAACAAAATTGATAT-AAAATATGAGAGAAAATATT------TATAA-CATTAAATGCTTTT--ACGGACCG----TTTGTTACCTTTGTTTTAATAAATGGTAACCGAATTGCAC------CTA-----CT--TTATGTTAT------TTACAAGGTAGCCAGGCCGTCGCTTTG-ATTTTTTTTC-TCCTTCAAATg
gi|7 : GATTCGCTACTT------TGGTTAA-TTA--AAAACATTGTGATACAGACACAGGAATAGAG-TT-----------------------------T-GAAG-CG--GA-----G------AGAC--TAACAATTGTAGC-GGA-GGCGGTGACAATCCGAAAAATATTCGTCTTGTCTGACCTTA----GCTTT-GGCAAATATAAC---AGATTCTTTC-AATGTCCTGTACGTGTTTACG--GTAGAT-----------ACCACTGAATTATTCCGA------CACGCTCATT--CGAAATCACTGCTACAACTAAATACTTACCTGATCCTCTAGATCGATGGTTCGATGAgt
gi|7 : ATGACTAAATCTTTTGGTATCATAACGGACAAGAAACTGACAAACCACAGTGCCAGGAAATATTTGCTTCAGAAATTGAATGAC-AA----------ACAAAATCAACTCATGCAAATTACCGGTTACTA--AAAC-ATGTCCTATGAGAATAATTACTGTCA-CATCAACGAGATT--C----------------TAACAT-------TTTA----------GACTCAAACGACACACAAATGCCAATTACACATGCTCCAAATGCTCAGCAG--CAC-ACAA------ACTATTCACAGATCAA-----A-TCTA-----------ATCGCCGGCTCATGTCAACGTGACCTG-GTAATTCAAATCATTTT-CGGTGCTGA-AATTCACAAAGGTACATTTTATAT-CGTATAAACCAAGTTAAAATCAGCTCCCCGCCACAGCAACAAATTAGAA----AATTC-GACTCATTGTTGACAGTGGCActaaatcttttggtatcataacggacaagaaactgacaaaccacagtgccaggaaatatttgcttcagaaattgaatgacaaacaaaatcaactcatgcaaattaccggttactaaaacatgtcctatgagaataattactgtcacatcaacgagattctaacattttagactcaaacgacacacaaatgccaattacacatgctccaaatgctcagcagcacacaaactattcacagatcaaatctaatcgccggctcatgtcaacgtgacctggtaattcaaatcattttcggtgctgaaattcacaaaggtacattttatatcgtataaaccaagttaaaatcagctccccgccacagcaacaaattagaaaattcgactcattgttgacagtggca
gi|8 : gattcgctactttggttaattaaaaacattgtgatacagacacaggaatagagtttgaagcggagagactaacaattgtagcggaggcggtgacaatccgaaaaatattcgtcttgtctgaccttagctttggcaaatataacagattctttcaatgtcctgtacgtgtttacggtagataccactgaattattccgacacgctcattcgaaatcactgctacaactaaatacttacctgatcctctagatcgatggttcgGACAAGAAACTGGCAAACCACAGTACCAGAAAATATTTGCTTCAAAAATTGAATTAC-AACAATGTT---ACAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-AT--CCTATGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAAAAT-------TTTA----------CACTCGAACAACATAACTTTGCCAATTC--------------GTTCAGTAG--TGC-ACAT------ATTATTCACAGTTCAAATCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAATGTGACCAGTGTAATCCAAAGCATTTT-CTGTGCTTA-AATTCACAGAGGTACATTCAATGTGCATAAAAACCAAGTTAAAAGCAGCTCGCCGCCACAGCAACAAATTAAAAAGAAATTTC-GACACAATGTTGACAGTTACACTGATGCTC----------AATAACACATGATTC--------ACAA
gi|9 : ----------CACTCAAACAACACATACATGCCAATTCTACATGCTCCAAATGTGCCGCAG--CAC-AC----------TATTCACAGATCATCTCAAACTCTAT-AAACACGGCATCGCCAGCTCATATCAACGTGAATTTTGTAAATCAAAGCATTTT-TGGTGCTCA-ACTTCATGGAAGTACATTCAAT-TACATGTAAATCAAGTTAAAAGCAGTTCCCCACCGCAGCAACAAATAAGAAAGATAATTT-CACTCATTGTTGACAGTGACAC-GACCCTC----------AATAAAACAC-AT----------------------GTGTTAAAACATTGAAGATCGTGGTATATGAACTATGACATAGGTACTGTATTAAGTC----TGGTGTTGCATTGTAATCGCATG----------------T--T--------------T----------TGGA-----------------TGT---------AA-CTTTTTTT--GTTTTG----AATTATTAAATTA-AAAAATAGTGTTTTGTT--------TTGATTTAAAG-AAAACAatgtatgagaaggctatatgtcacatatgtatgggaaggctatatgtcacatatatatgggaaggctatatgtcacatatatatgaaaaaataaaacatttacatattagtaaaatatgtacatgtttatgt
blockSeqs : ACA A . TT A AATAGTGA C TTTATA TAAAAACAT A AA T GTAGTGGAGAGACTGATAATTTTACCAGAGGCGT G TAGGA AT A GCCG G TGC CA AA C G A G CGT . T A G A T A C A C T A A AC A A G TT AGCATAAAAAAAATCA A AAAGAAA TAAAAGTTAA A T TACGCATATTATTCAAT GA C A G G C . C T C T A TTTCAACAAA A CCGTACATA T T T GT TAATAGATCTAACTGTTATTGTTTTC TT AG T AA T G A AATTG T T CAATGAA . GT T CTTAGG ATAAC AA AATTGT T G A A
blockSeqs : GCC A . GC T AATAGAGT T . TA T GA . AGAAATTGAGAGTTTGAAGCGAAGAGAC G GCGGA AC A . G . A AT T G A G AGA . A T G . T T C . C T A A . . A . . AGCATACAGAAATTT G . . A A GCTGTGTAT GC A . C G T . . C C G . TCTCAAT G T A T A AG TTTTGAATCTAACTGTTGTTTTTTTT T AG A . . G A . T G A . . . . . . . T A C .
blockSeqs : . . . GG T AAT C . AA A TA . TGAAGCGGAGAGAC . . . . . . . C . G . . . . . T A A . A T T . C T A T . . A . . . A . . T C CATACATAT GA T . T T T . . C A C . GTGAAAC A G A A G AT TAATGGATCTGACTGTTTTTGTTTTA C AT C . . A . . A T A . . . . . . . T A A .
blockSeqs : . . . . . . TA . T . . A T A . C C C . C T A T . . A . . . C . . G A CACACAAAC AA C . T T T . . T G T . ACTCAAC G A C G A TT TTTAGGTTCTAAATGATTTTGTTTT T TG C . . T . . A A A . . . . . . . A C C .
blockSeqs : . . T T T . C T A A . . G . . . A . . A A TGCACATAT GA G . T G T . . T C G . TCTATAT G A G A G GA TTTTTACTTGTTTATATTTTG T AG G . . G . . T G T . . . . . . . A A A .
blockSeqs : . T . . . . T . . A . . . C . . A C CGCACATA GA C . T T T . . C C G . TAGCGAT G A A T A AT TTTTGGATCT T AG C . . G . . . T G . . . . . . . A A A .
blockSeqs : . . . . . T . . G . . . C . . A G CACAC AA C . T T T . . C A A . GCTCAAT . . . A A . TTTTGGATGT C . C . . . . . . T T . . . . . . . A . T .
blockSeqs : . . . . . . . . . . . . A . . T A CACA A . . T T A . . T A T . CCTCAAT . . . TTTTT C . A . . . . . . . . . . . T . . .
blockSeqs : . . . . . A A GT . . . . . . . . A . . CTGT . . . . . A
blockSeqs : . . . . . . . . . . . .
blockSeqCons : **** AAT**************** TA********* ** NCTCAAT**********
originalCons : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAATA---------TAGTGTATCGCCGATTCGCTACTT------TGGTCAAACTA--AA-----TGTGATACGGACATAGAAATAGAG-TT-G--A--G-GGAGAGACTGATAATTGTACC-GAGG-CG--GA-----GTACCGGAGGCG-TGACAATTGTA-C-GGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTCAA-----CG-AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-TTATTTTCAGATATTGGTACGNTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG-AAAACAA-----GTATAAAAATCTGAGAGAAAANATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
finalCons : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGACTGAAAT----------------ATCGCCGATTCGCTACTT------TGGTCAAACTA---------TGTGATACGGACATAGAAATAGAG-TT-G--A--G-GGAGAGACTGATAATTGTACC-GAGG-CG--GA-----GTACCGGAGGCG-TGACAATTGTA-C-GGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACNCTCAAT----------AAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-TTATTTTCAGATATTGGTACGNTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG-AAAACAA-----GTATAAAAATCTGAGAGAAAANATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 3333 1111 11 8888888888888888888888888 222222 222222 1111 333333333333333333333333333333333333333333333333333333333333 2222222 2222 111 3333 11 5555555555555555 1111111 1111111111 222222222222222222 111111111 111111111 333333333333333333333333333333333333333333333333333333333333333333333333333333 1 11111 1111111 111111 11111 111111
lowQualScore : 3333 3 33 7777 8 11 5555555555555555555555555 3 333333 333333 1 7777 6 11 8 999999999999999999999999999999999999999999999999999999999999 2 7777777 0 11 3 0 0 1111 2 777 55 0 66 1 2 4 0 0 2 5555 11 1 1 3 5 2 2 5 4 5 1 7 5 66 4 2 4 55 1111111111111111 4 3333333 5555555555 0 1 1 777777777777777777 33 5 3 0 1 4 1 3 0 3 0 0 2 1 2 4 1 777777777 1 777777777 4 0 5 1 0 22 111111111111111111111111111111111111111111111111111111111111111111111111111111 44 0 44 0 1 66 4 0 1 0 0 22222 9 2 5555555 4 55 4 111111 11111 66 222222 0 1 3 2 4
lowQualScore : .... . .. .... . .. ......................... . ...... ...... . .... . .. . ............................................................ . ....... . .. . . . .... . ... .. . .. . . . . . . .... .. . . . . . . . . . . . . .. . . . .. ................ . ....... .......... . . . .................. .. . . . . . . . . . . . . . . . . ......... . ......... . . . . . .. .............................................................................. .. . .. . . .. . . . . . ..... . . ....... . .. . ...... ..... .. ...... . . . . .
lowQualScore : 2222 2 88 0000 8 00 6666666666666666666666666 2 000000 000000 4 0000 0 88 0 777777777777777777777777777777777777777777777777777777777777 5 0000000 2 00 5 2 2 2222 5 555 88 2 88 0 5 2 2 2 5 5555 00 4 4 7 7 2 2 4 4 7 7 4 1 11 4 7 4 55 5555555555555555 9 0000000 9999999999 2 5 3 555555555555555555 22 1 6 5 2 2 4 6 4 6 8 9 7 0 4 0 0 888888888 9 000000000 1 2 9 1 1 55 111111111111111111111111111111111111111111111111111111111111111111111111111111 55 1 99 1 0 11 4 9 4 1 0 55555 8 6 6666666 0 55 0 555555 11111 11 888888 7 4 4 6 4
consensus : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGCGAC--TGAAA-----TA----------------TCGCCGATTCGCTACTT------TGGTCAA------ACTAT----GTGATACGGACATAGAAATAGAG-TT-G--A--G-GGAGAGACTGATAATTGTACC-GAGG-CG--GA-----GTACCGGAGGCG-TGACAATTGTA-C-GGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACTCTC---------AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-TTATTTTCAGATATTGGTACGNTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG-AAAACAA-----GTATAAAAATCTGAGAGAAAANATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
Reference ( family-4736 ) : TACGCGCTGTCAAAAAATCAAAACAAACATGGTTGA-C-TAATTTTCCGAGTCGGTAATTC----AGTGCAAATTGNTGGGAAAGGCATGGGCGTTGTGAC--TGAAA-----TA----------------TCGCCGATTCGCTACTT------TGGTCAA------ACTAT----GTGATACGGACATAGAAATAGAG-TT-G--A--G-GGAGAGACTGATAATTGTACC-GAGG-CG--GA-----GTACCGGAGGCG-TGACAATTGTA-C-GGG-GGCGGTGACAATCCGAAAAATGTTCGTCTCGTCCGACCTTA----GCTTTGGGCAAATACAGC---AGATTCTTTCAAATGTCCTGTGCGTGTTTGCAATGTANATGCTCGGAAGAGACCACTGAACTATTCCGAGC-G--CACACCCATT--CTATATCGCTGCTACAACTAAGCACTTACCTGGTCCTCTGGATCAATGGTTCG-TGAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATGACGACACGCATGACTAAATCTGCTGGTATCACAACAGACAAGAAACTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAACTGAACGAC-AACAATGTTCCTGCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCCTCTGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAANAT-------TTTA----------CACTCGAACAACACAAATATGCCAATTCCACATGCTCCAAATGTTCAGCAG--CGC-ACAT------ATTATTCACAGGTCAACTCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAACGTGACCGGTGTAATCCAAAGCATTTT-CGGTGCTCA-AATTCACGGAGGTACATTCAATGTACATGTAAACCAAGTTAAAAGCAGCTCCCCGCCACAGCAACNAATTAGAAAGANAATTC-GACTCATTGTTGACAGTGACACTGACNCTC---------AATAAAACACGATTC--------ACNATCACACGCGTGTTNAAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTGTATGACGTCAGTATGGTGTTGCATTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-TTATTTTCAGATATTGGTACGNTTATT--GCTA-AAATATAGTGTTTTGTTGTTGGTTATTGATTTAAAG-AAAACAA-----GTATAAAAATCTGAGAGAAAANATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCAGGCCGTCGCTTTGAAGTNTTTTTC-TCCCTCAAAT
gi|1 : TACGCGCTATCAAATAATTAAAGCAAACATGGTTGATC-TAATTTTCCGAGTCGGTAATTCGATCAGTGCAAATTGATGGGAAAGGCATGGGCGTTGTGAC--TGAAA-----TACTAGTCTAGTAGTGTATCGGCAATTTGCTACTT------TGGTCAA------ACTATAGATGAGATGCGGACATAGAAATAGAG-TT-AGAA--GCGGAGAGACTGACAATTGTACC-GGGGGCGATGACAATTGTACCGGGGGCGGTAGCAATTGTA-CCGGG-GGCGATGGCATTTCGAAAAGTATTCGTGTCGTCCGACTTTA----GCTTTGGGCAAATACAGC---AGAATCTTTCAAATGTCCTGTGCGTGTTTACAATGTAGATGCTCGGAAGAGACCACTGACCTATTCCGAGC-C--GACACACACTTACTATATCGCAGCTACAATTAAGCACTTACTTCGTCCTCTGGATCAATGGTTTG-TGAAAAATGCCTTACGGATGAACAAGCTCCAATCTATGACGACACACATGACTAAATC----------ACAACAAATAAGACATTGACAAACCACAGTGCCAGAAAATATTTGCTTCAGAAATTGAATAAA-AACAATATTTCGGCAAATTCACATCATGCAAATATC-GGTCACTT--TAAC-ATTTCCTCTGTAAATAACTACTGTCA-TATCAACGCGAAT--C----------------CAACAT-------TTTA----------CACTCAAACGACACAAATATGCTAATTCCACATGCTCCAAATGTTCACCAG--CAC-ACAT------ACTATTCACAGGTAAACTCTAACTTTTT-GACCACGGCATCACCAGCTCATGTTAACGTGACCGGTGTAATCAAAAGCATTTTACGGTGCTCA-AATTTACGGCGATACATTCAATGTAAATGTAGAACAAGTTCAAAGCAG-TCCCCGCGACAGCAACAATTTAGAAAGAAAATTC-CACTTATTGTTGACAATGACACTGACTCTCAATGCTTTGAATAAAACACGATTC--------ACCATCACATACGCGTT-AAACATTGAAGGTCGCGGCATATGAACTATGACGTAGGTACTATATGACGTCAGTATGATGTTGCAGTGTAATCGCGTG----------------T--T--------------T----------TG-------------------T-T---------AA-AAAAAATCAAATATATATACGGTTATT--ACTA-AGATATAGTGTTTTGTTGTTTGTTATTGATTT-AAG-GAAACAA-----GCATAGAAATAAGAGAGAAAAGATT------GATAATAATAAAAAAAATTT--ACGGACT-C-TTTTTCATGCATTTATTTTAATGAATAGTAACCGAATTACAC------CCA-----AT--TCATGTTGT------TTACAATGTAGTCAGACTGTTGCTTTGAAGTTTTTTTC-TGCCTCAAAT
gi|10 : TTCG-TGAGAAATGCCGTCGGGGTAAACAAGTTCCAATCTATGATAGCAAGCATGGCTAAATCTGCTGGTATCACAGCCGACAAAAATCTGAGAAATCACAGTGACAGAAAATATTTGATTCAGAAACTGAGCAACAAACATTGTTCCTGC-AAATCACATCATGTAAATATCCGGTCACAA--AAAC-ATATCCTCTGTTAATAACAACTGTCA-CATCAACGAAAAT--CAGCATAAAAAAAATCACAAAAT-------TTTA----------CACTCGAACAACACAAATATGCCTATTCCTTAGGCTCCAAATGTTCAGAAG---GCTGTGT------ATCATTTACAGGTTAACTCGAACTCTGT-GAACTCGACGTCGCCAGCTCTTATCGACGTGATCGGGGGAACCCAAAGCATTTT-AAGTGCTCA-AATT
gi|11 : T--C----------------CAAGAG-------TGTA----------CACTCAAACGACGTAATCATACCAATTCCACATGCCCCATATGTTAAGCAG--CGC-ACAT------A-----CACAGGTCAACTCGCAATATAC-AGTCACAGCATCGTCAGCTCATGTCGACGT-------------CAAAACATTTT-CGGTACTTACAATT
gi|11 : cagcacaaagtaagtCATATCAACCATTCAGAAAGATAATTT-GACTCAT------------CACTGACTCTC---------AATAGTACACAATTT--------TCTATCATACATGTGTTTAAAAATTGAATTTTACGAC-TATGACGTAC-ATGTGGGTACCGTATTACGTAAGTATGGTGTTGTATTGTTATCGCGTG----------------T--TTTTAC---------T----------TG-------------------T-TTATATTTTGAA-TTATGTTCAGACATTGTTACGTTTACT--GCTT-AAACATAaaatgtcaaacatatcaaccattcagaaagataatttgactcatcactgactctcaatagtacacaattttctatcatacatgtgtttaaaaattgaattttacgactatgacgtacatgtgggtaccgtattacgtaagtatggtgttgtattgttatcgcgtgtttttacttgtttatattttgaattatgttcagacattgttacgtttactgcttaaacataa
gi|12 : cagcacaaagtaagttccaagagtgtacactcaaacgacgtaatcataccaattccacatgccccatatgttaagcagcgcacatacacaggtcaactcgcaatatacagtcacagcatcgtcagctcatgtcgacgtcaaaacattttcggtacttacaattaaatgtcaaaGTGTGTTTTTCCATTGTTATCACGTG----------------T--T--------------T----------TGGAT----------------C-T---------AA-CTGTTTTa
gi|12 : TG----------------T--T--------------T----------T----------------------T---------AA-TTATTTTCAGATATTTGTACAATTATT--TCTA-AAATATAGTCTTTTGATGTTGGTTATGGATTTAAA---------------TATAATAATCTGTGA-------------------------------CT-T--ACGAACTAC-TTTTTGTTGCATTTGTTTCAATGAATGGTAACTGAAGTACAC------CTA-----CT--TTATGTTAT------TTAATAGGTAGCCTGGTCATC-----------TTTTTC-TCCCTCAAAttgttttttttgtttttaattattttcagatatttgtacaattatttctaaaatatagtcttttgatgttggttatggatttaaatataataatctgtgacttacgaactactttttgttgcatttgtttcaatgaatggtaactgaagtacacctactttatgttatttaataggtagcctggtcatctttttctccctcaaa
gi|13 : gtgtgtttttccattgttatcacgtgttttggatctaactgttttttgtttttttAATTC----AGTGCAAATATTTGGAAATGCCAT---CGTATCGAC--TGAAA-----T-------------------------TCGCTATTT------TGGTCAA------ACTAT----GTGATACGGACAT-GAAAT-----TT-----------AGAAATTGAGAGTT----T-GAAG-CG--AA-----G------AGAC--TGACAATTGTA-T-AGGAGGCGGTGATAATCCGAAAAATGTTAGTCTCGTCCGACCTTAGCCGGCTTTGGAAAAATACAGT---AGATTCTTT-AAATGCCCGGTCCGTGTTTGCA
gi|14 : aaaGCTGTCAAAAAATCAAAACAAACATGGTTG----TAA--------GTCAGTAATTC----AGTGCAAATTG-----AAAGGCATGGGCATTGAAATAGTGAA------------------------TTGCCGATTCGCTACTT------TGGTCAA------ACAAT----GTGATACGGACATAGATAAAGAGTTT-GT-A--GTGGAGAGACTGATAATT-T---------------------TACCAGAGGCGTTGACAATT-----------------------CGAAAAATGTTTGTCTCATCCGACCTTA----CTTTTGGGCAA
gi|15 : atggTACGCGCTGTCAAAAAATCAAAACAAACATGGCTAA-CATAATTTTCCGTTTCAGTAATTC----AGTGTTAATTGCTGGGAAAGGCCTGTGCGTTGTGAC--TAAAATAGAGTA----------------TCGTGGATTTGCTATTTTTTATATGGTCAA------ACTAT----GTGATATGGACATTGAAAGAGAG-TTCG--ATTA-GGAGAGACTGGTTATTGCACCTGAGG-C
gi|16 : AACAA-----GTA-AAAAATCTGCGAGAAATTATT------AATAA-AATAAAATTCCTTT--ACGGACTAC-TTTTTGTTGCAATTGTTTCAATGAATGGTAACCGAATTACAC------CTA-----CT--TCATGTTGT------TTACTAGGTAGCCTGGCCGTCGCTTTGGGGTATGTTTC-TCCCTCAAATtg
gi|17 : TGA-AATAAAATTCCTTTGTACAAAGTTC-GTTTTGTTGCATTTGTTTCAATGAACTGTAACCGAAGAACAC------CTA-----CT--TCATGTTGA------TTACCAGGTAGCCTGGCCGTTGCTTTGAAGTCATTGTC-ATCCTCAAATg
gi|18 : tCTGTAAAAAACTCAAAACAAACATGGTTGG-CCTAATTTTCCAAGTCGGTAATTC----AGTGCAAATTGGTGGGAAAGGCATGGGCGTTGTGGC--TGA--------A----------------TCTCCGATTCGCAAC
gi|19 : GAGAGAAAAGATT------AATAT-ATTAAA-TTCCTTT--ATGGACTAA-TTTTTGTTGCATTTGTTTCAATCAATGGTAA-----------------------------TCA---TGT------TTACCACGTAGCCAGGCCATCGCTTTG
gi|2 : AAATACAGCTGCAGATTCTTTCAAATGTCCTGTGCGTGTTTGAAAAGTACATGCTCAGAAGAACCCATTGAACTATTCTGAGCCGT-CACACCCATT--TTATATCGCTGCAGCAACTAA-------CCCGGTCCTCTAGAGCAGTGGTCCG-TGAGAAATCTTGTCGGGGTAAAAAAGCTCAAATCTATGATGACTTGCATGACAAAATCTACTGGTATCACAACAGACACGACATTGACAAACCACAGTGGTAGAAAAGATTTGCTTTAAAACCTGAACGAC-AACAATGTTCCTG-----TCA-ATCATACAAATATCCGGTCACAA--AAAC-ACAGCATCAACGA-TAA------TCAGCATAAA--ACAATTTC----------------TAAAAT-------TTTA----------CGCTCGAACAACACAAATTTGCCAATTTCCCATGTTCTAAATGTTCAGCAGTACGC-ATATTATTCAATTATTCAAAGGTCAACTCGAATTCTAT-GAACACGGCCTCGTCAGCTCATGTGGAAGTGACCGGCGGAATACAAAGCATTTT-CGGTTCTCA-AATTCATGGAGGTACATTCAATGTACATGTAAATCAAGTCAAAACCAGTTATCCACCACAGCAACCAATTAGAAAGAGAATAC-GACTCACTGTTGACAGTGACACTGACGTGA---------AACAAAATACGAATC--------GCAATCACACGCGTTTTTAAATATCGAAGATCGCAGCATATAA--TCTGACAGAGGTACTGCATCACGTTAGTATGGTGTTGCGTTAAAATCGCGTG----------------TAATAGATCTAACTGTTAT----------TG-------------------T-TTTC------AA-TTATTTTCATATATTGGCACACTTATT--GCTT-GCATAAAGTGTTTTGTTGCTGGTTATTAGTTTAAAG-AAAACAA-----GTATAAAAATCAGGGAGAAAATACT------AATAA-AATAAAATTCCTTT---TGAACTAC-TTTTTGTTGCTAATGATTCAATGAATGTTAACCGAATTACAC------CT
gi|20 : TACTAAGAAGCTAG-CCGTTGCTTTGAAGTATTTTAA-TCCCTCAAGT
gi|3 : CAATGTATATGCTCAGAAGAGACCTAAGAACTATTCCGAGC-AGACATACCCATT--CTAATTCGCTGGTACAACCCAGCCCTTAACTGGTTCCCTGGATCAATA--TC-------AA----------GTATACTAGCTCCAATATATGAACACATGCAT-ACTATATCTGCAGGTACTACAACAGACAAGAAACTGACAAACTACATTGCCAGAAAATATTTGCTTCGAAAATTAAATGAC-AACAATGTT---GCAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-ATATCGCCTGTGAATAATTACTGTCA-CATCAACGAGAAT--C----------------CAACAT-------TTTA----------CACTCAAACAACACAAAT--------TCCACATGCTCCAAATGTTCAGCAG--CAT-ACAT------ATTATTCACAAGTCAACTCAAACTCTAT-GAACACGGCATCAACAGTTCATGTCAACGTGACCGGTGTAATCCAAATCATTTT-TGGTGCTTA-AATTCACGGAGGTACATTCAATG---AT---AACCAGGTTTAAGGCAGCTCCCCGCCACAGCAGCAAATTAGAAAGACATTTC-GACTC-------------ACACTGACACTC---------AACAAAACACAATTC--------ACAAACACACGCGTGTTAAAACATTGAAGGTAGCGGTATATGAACTATGACATAGGTACTGTATGACGTCAGTATGGTGTTGCATTTTAATCGCGTG----------------T--T--------------T----------TGAATCTAACTGTTGTTTTTTT-T---------AA-TTTTTTTCTGATATCGGTACGCTTATT--GCTA-AAATATAGTGTTTTATTGTTGGTTATTGATTTAAAGAAAAAGAA-----GTTAAAAAATCTGAGAGAAAAAATT------TAAAA-AATGAAATTCTTTT--ACGGACTACTTTTTTGTTTCATTTGTTTCAATGAATGGTAACCGAGTTACACCTTAGGCTA-----CT--GTATGTTGT------TTACTAGGTAGCCAGGATGTCGCTTTGCAGTCTTTTTC-TCCCTCAAATtag
gi|4 : CAACTAAGCATTTACCTGGCCCTCTGTATCAATGGTTCG-TAAGAAATGCCGTCGGGGTAAACTAGCTCCAGTTGATGACGACACGCATGACTTAATCTGCTGGTATCACAACAGACTGGAAACTGACAAACCTCAGTGCCAGAAAATATTTGCTTCAGAAATTCA------AACATTATTCCTGCAAAATCACATCATGCAAATATCCGGTCACTAACAAATAATATCCTCTGTGAATATCTGCTGTCA-CATCAACGAGAAT--C----------------CAA----------TTTA----------TACTCAATCAATACAATCGTGCCAATTCCATATGCACAAAATGTTTAGCAG--CAC-A------------------AG------------TCTAT-GAACACGGCGTTGCCAGTTCATGTCAACGTTACCTGTGTAATCAAAAGCATGTT-CGGTGTTTA-AATTCACGGAGGTACATTCAATGTACATGTA----AAGTTAAAAGCAGCTCCCCGCCACATTAG-GAGTTGAAAAGATAATTC-CA-TCCTTGTTTACCGTGACACTGACTCTA---------TATAAAACACGATTC--------ACCACCACACGCGTGTTGAAACATTGTAGATCGCAGCATATGAACTATGAATTTGGTTCTTTATGACGTCAGTGTGGTGCTGCATTTTAATCACCTG----------------T--T--------------TAGGTTCTAAATGATTTTGTT-----------T-T---------AATTTATTTTC--ATATCGGTATTGTTATT--GCTATATATATAGTGTTTTTATGATGTTT-TTTATTTAA---AAAACAA-----GTA-AAAAA-CTAAGAGAAAAGATTCAATGAAATAA-AATAAAACTCCTTT--ACGGACTAC-TTTTTGTTTCATTCGTTCCAATGAATTGTAACCGAATTACAC------CTAATAACCTAATCGTAATGT------TGACTAGGTAGTCAGGCCGTCGCTTTGAAGAATTTTTC-TCTCTCAAAT
gi|5 : cg--CACAACCAGT--CTATATGACTGCAACAACTTAATACATATTTGGTCGTATAGATCAGTAGTTTG-TAAGAAATGCCGTCGGGGTAAACAAGCTCCAATCTATAATGCTATGCATGACTAACTCTGCTGGTATCT-----GACAAGAAACTGACAAACCA--GTGCCCAAACATATTTGATTCAGAAACTGAA-GAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGGTCAC-A--AAAC-TTGTCCTCTGTGAATAACTAATGTCG-CATCAACGAGAAT--CAGCATACAGAAATTT-CAAAAG-------TTTA----------CACTCGAACAAAACAAATAAGCCAATTCCCCATGCTCAAAATGTTC-GCAA----------------GTTATTCACAGGTCAACTCA-----TATAGAGCATGGAATCGTCATCTCATGTCAACGTGATCGGTGGAATCCAGAGCATTTT-CGGTGCTCA-GACTCATAAAGGTACATTTAATGTACAAGTTAATCAAACCAAAAACAGTTCCCCGCGAAAACAACCAATTAGTAAGAGAATTC-GACTCATTATTGACAGTGACA--GACTTTC---------AACAAA--------------------ATGAAACGTGTGTTAAAATGTTGAAGGTCGCCGCAAATGAAC----------------TATGACGTCAGTATGATTTTGCATTGTAATTGCGTGTAATGGATCTGACTGTT--T--------------T----------TG-------------------T-TTTA------AA-CCATTTTCAGATATTGGTACGCGAATA--GCTA-ACATATAATGTTTTGTTGTTGGTTATTGATTTAAAG-CAAAGAA-----GTAAAAAAATCTGAGAGAAATTATT------GAGAA-AAAATAATTCCATT--ACGGACTAC-TTTTTGTTGTAATTGTTT
gi|5 : gt------CTA-----CT--TTTTGTTGTAATTGTTTACCAGGTAGCCTGGACGTCGTTTTGAAGTATTTTTTATCCCTCAAATaccaggtagcctggacgtcgttttgaagtattttttatccctcaaatg
gi|6 : gtcacaaccagtctatatgactgcaacaacttaatacatatttggtcgtatagatcagtagtttgtaagaaatgccgtcggggtaaacaagctccaatctataatgctatgcatgactaactctgctggtatctgacaagaaactgacaaaccagtgcccaaacatatttgattcagaaactgaagacaacaatgttcctgcaaatcacatcatgcaaatatccggtcacaaaacttgtcctctgtgaataactaatgtcgcatcaacgagaatcagcatacagaaatttcaaaagtttacactcgaacaaaacaaataagccaattccccatgctcaaaatgttcgcaagttattcacaggtcaactcatatagagcatggaatcgtcatctcatgtcaacgtgatcggtggaatccagagcattttcggtgctcagactcataaaggtacatttaatgtacaagttaatcaaaccaaaaacagttccccgcgaaaacaaccaattagtaagagaattcgactcattattgacagtgacagactttcaacaaaatgaaacgtgtgttaaaatgttgaaggtcgccgcaaatgaactatgacgtcagtatgattttgcattgtaattgcgtgtaatggatctgactgtttttgttttaaaccattttcagatattggtacgcgaatagctaacatataatgttttgttgttggttattgatttaaagcaaagaagtaaaaaaatctgagagaaattattgagaaaaaataattccattacggaACTAGAAACTGACAAACCACAGTGCCAGAGAATATTTGATTCAGAAACCGAACGAC-AACAATGTTCCTGCAAA-TCACATCATGCAAATATCCGTTCACAA--AAAT-ATATCCTCTGTAAATAACTACTGTCA-TATCAACATGAA---C----------------CAGCATAAAGAAATTTATAAAAGTTAACATTTACAAAACAAAAATATGCTGATTCCGCATAATTCAAATGCTTA----------------------------CAGGTCAACTCGAAGTCTTT-AAACACGGCACAGTCAACT---ATCAACGTCATCGGTG--A---AAAGTAGGTT-CGGTGCTGA-AATCCATGGAAATACATT-AGTATAAAAGTAAACAAAGTTAAAAGCATTTCGCTGCTACGTCAACCAACTA-ATAGAGAATTAAGACCCATTGTTGACAGTGACACTGACTAGC---------GATAAAACACGATTCCCGTACATACGCTCGTACGTGTGTTTAAACATTGAATACCGCGGCATATGAACTATGCCGAATGTACAGTATGACATCAGTTTGGTTTAACGTTGTAATCTCA------------------------------------C----------TG-------------------T-----------------TTTTCAGATATTGGTTCGCTAATT--GATA-AATTATAGTGATTT-TTGTTGGTTATTGATTTGAAGAAAAACAAAATTGATAT-AAAATATGAGAGAAAATATT------TATAA-CATTAAATGCTTTT--ACGGACCG----TTTGTTACCTTTGTTTTAATAAATGGTAACCGAATTGCAC------CTA-----CT--TTATGTTAT------TTACAAGGTAGCCAGGCCGTCGCTTTG-ATTTTTTTTC-TCCTTCAAATg
gi|7 : GATTCGCTACTT------TGGTTAATTAAAAACATT----GTGATACAGACACAGGAATAGAG-TT-----------------------------T-GAAG-CG--GA-----G------AGAC--TAACAATTGTAGC-GGA-GGCGGTGACAATCCGAAAAATATTCGTCTTGTCTGACCTTA----GCTTT-GGCAAATATAAC---AGATTCTTTC-AATGTCCTGTACGTGTTTACG--GTAGAT-----------ACCACTGAATTATTCCGA------CACGCTCATT--CGAAATCACTGCTACAACTAAATACTTACCTGATCCTCTAGATCGATGGTTCGATGAgt
gi|7 : ATGACTAAATCTTTTGGTATCATAACGGACAAGAAACTGACAAACCACAGTGCCAGGAAATATTTGCTTCAGAAATTGAATGAC-AA----------ACAAAATCAACTCATGCAAATTACCGGTTACTA--AAAC-ATGTCCTATGAGAATAATTACTGTCA-CATCAACGAGATT--C----------------TAACAT-------TTTA----------GACTCAAACGACACACAAATGCCAATTACACATGCTCCAAATGCTCAGCAG--CAC-ACAA------ACTATTCACAGATCAA-----A-TCTA-----------ATCGCCGGCTCATGTCAACGTGACCTG-GTAATTCAAATCATTTT-CGGTGCTGA-AATTCACAAAGGTACATTTTATAT-CGTATAAACCAAGTTAAAATCAGCTCCCCGCCACAGCAACAAATTAGAA----AATTC-GACTCATTGTTGACAGTGGCActaaatcttttggtatcataacggacaagaaactgacaaaccacagtgccaggaaatatttgcttcagaaattgaatgacaaacaaaatcaactcatgcaaattaccggttactaaaacatgtcctatgagaataattactgtcacatcaacgagattctaacattttagactcaaacgacacacaaatgccaattacacatgctccaaatgctcagcagcacacaaactattcacagatcaaatctaatcgccggctcatgtcaacgtgacctggtaattcaaatcattttcggtgctgaaattcacaaaggtacattttatatcgtataaaccaagttaaaatcagctccccgccacagcaacaaattagaaaattcgactcattgttgacagtggca
gi|8 : gattcgctactttggttaattaaaaacattgtgatacagacacaggaatagagtttgaagcggagagactaacaattgtagcggaggcggtgacaatccgaaaaatattcgtcttgtctgaccttagctttggcaaatataacagattctttcaatgtcctgtacgtgtttacggtagataccactgaattattccgacacgctcattcgaaatcactgctacaactaaatacttacctgatcctctagatcgatggttcgGACAAGAAACTGGCAAACCACAGTACCAGAAAATATTTGCTTCAAAAATTGAATTAC-AACAATGTT---ACAAAATCACATCATGCAAATATCCGGTCACTA--AAAC-AT--CCTATGTGAATAACTACTGTCA-CATCAACGAGAAT--C----------------CAAAAT-------TTTA----------CACTCGAACAACATAACTTTGCCAATTC--------------GTTCAGTAG--TGC-ACAT------ATTATTCACAGTTCAAATCGAACTCTAT-GAACACGGCATCGCCAGCTCATGTCAATGTGACCAGTGTAATCCAAAGCATTTT-CTGTGCTTA-AATTCACAGAGGTACATTCAATGTGCATAAAAACCAAGTTAAAAGCAGCTCGCCGCCACAGCAACAAATTAAAAAGAAATTTC-GACACAATGTTGACAGTTACACTGATGCTC---------AATAACACATGATTC--------ACAA
gi|9 : ----------CACTCAAACAACACATACATGCCAATTCTACATGCTCCAAATGTGCCGCAG--CAC-AC----------TATTCACAGATCATCTCAAACTCTAT-AAACACGGCATCGCCAGCTCATATCAACGTGAATTTTGTAAATCAAAGCATTTT-TGGTGCTCA-ACTTCATGGAAGTACATTCAAT-TACATGTAAATCAAGTTAAAAGCAGTTCCCCACCGCAGCAACAAATAAGAAAGATAATTT-CACTCATTGTTGACAGTGACAC-GACCCTC---------AATAAAACAC-AT----------------------GTGTTAAAACATTGAAGATCGTGGTATATGAACTATGACATAGGTACTGTATTAAGTC----TGGTGTTGCATTGTAATCGCATG----------------T--T--------------T----------TGGA-----------------TGT---------AA-CTTTTTTT--GTTTTG----AATTATTAAATTA-AAAAATAGTGTTTTGTT--------TTGATTTAAAG-AAAACAatgtatgagaaggctatatgtcacatatgtatgggaaggctatatgtcacatatatatgggaaggctatatgtcacatatatatgaaaaaataaaacatttacatattagtaaaatatgtacatgtttatgt