lowQualScore : 11111111111111111111111111111111111 1111111 111111111111111111111111111 1111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111 1111111111
lowQualScore : 77777777777777777 11 77777777777777777777777777777777777 0000000 22222 22 333333 1 88888888888888888888888888888 1 3333333 1 1 111 11 33333333 2222222222 000000000000000000000000000 1 1 1 88888888888888888888888888888888888888 1111 333333 111 1111111 111 111 1 22 77777777777777777777 1 11 4 1 222 6666666666 1 4444444444444444444444444444444444 44444444 1111 222222 4444444444444444444444444444444 44 1 1 11 888888888888888888888888888888888888888 2 2222222222 111 1 1 444444444444 3333 22222222 00000000000000000000000000000000000000000000000000000000000000000000000 222222222222222222222222222 00000000000000000000000000000000000000000000000000000000000000 4444444444444 2222 111 44 1 1 1 1111 1111111111111 111111111 33333333 0000000000 11
lowQualScore : 88888888888888888 00 55 4 4 6 6 4 66666666666666666666666666666666666 9 0000000 00000 55 444444 7 4 55555555555555555555555555555 0 6 5 2 7777777 5 0 777 1 99 9 6 6 4 88888888 6666666666 3 333333333333333333333333333 0 7 0 0 0 2 55555555555555555555555555555555555555 3 4444 666666 1 3 6 111 1111111 111 111 5 6 6 4 99 99 88888888888888888888 0 11 0 7 1 000 6 77 6 1111111111 6 4 3 2 0 1 3333333333333333333333333333333333 22222222 8 1 5555 333333 2222222222222222222222222222222 0 22 4 55 6 777 0 4 1 1 55 1 666666666666666666666666666666666666666 4 3333333333 444 2 2 3 8 0 8 1 8 1 1 8 0 000000000000 0 8 9999 5 5 2 8 77 1 66666666 55 5 66 44444444444444444444444444444444444444444444444444444444444444444444444 444444444444444444444444444 99999999999 9 3 11111111111111111111111111111111111111111111111111111111111111 6 66 6 55 5555555555555 2222 55 444 11 4 9 0 0 777 8 5 8 66 5 2 77 1111 777 55 8888888888888 000000000 66666666 777 777 2 5 5 5 0 0 777 9999 66 5 8888888888 33 6
lowQualScore : ................. .. .. . . . . . ................................... . ....... ..... .. ...... . . ............................. . . . . ....... . . ... . .. . . . . ........ .......... . ........................... . . . . . . ...................................... . .... ...... . . . ... ....... ... ... . . . . .. .. .................... . .. . . . ... . .. . .......... . . . . . . .................................. ........ . . .... ...... ............................... . .. . .. . ... . . . . .. . ....................................... . .......... ... . . . . . . . . . . . . ............ . . .... . . . . .. . ........ .. . .. ....................................................................... ........................... ........... . . .............................................................. . .. . .. ............. .... .. ... .. . . . . ... . . . .. . . .. .... ... .. ............. ......... ........ ... ... . . . . . . ... .... .. . .......... .. .
lowQualScore : 55555555555555555 00 55 0 0 0 0 0 77777777777777777777777777777777777 0 7777777 00000 00 333333 0 7 33333333333333333333333333333 8 0 0 5 8888888 0 0 555 2 77 0 0 7 3 00000000 7777777777 8 555555555555555555555555555 0 8 2 2 0 2 88888888888888888888888888888888888888 5 2222 555555 0 7 0 777 0000000 777 777 0 7 7 8 22 22 66666666666666666666 0 22 0 0 0 000 0 00 7 7777777777 0 5 2 5 8 0 6666666666666666666666666666666666 88888888 0 4 8888 000000 7777777777777777777777777777777 7 55 2 44 0 222 6 6 8 4 88 4 666666666666666666666666666666666666666 0 4444444444 000 8 8 2 0 8 0 8 0 4 4 2 8 666666666666 6 0 8888 4 7 7 6 99 4 66666666 77 7 11 77777777777777777777777777777777777777777777777777777777777777777777777 666666666666666666666666666 44444444444 6 3 66666666666666666666666666666666666666666666666666666666666666 7 33 7 00 4444444444444 6666 00 000 55 4 6 5 0 000 8 8 2 33 0 3 99 3333 000 55 9999999999999 666666666 77777777 000 888 7 4 0 0 4 1 555 5555 99 0 8888888888 88 0
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCATCAGTAATAAATGTTTAATAANTGTNNTAANGTGATANCTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGGTTTNACTTACTTAATAAAATTTTAA-A-------------CTGGGAAAATACCA------CATATTCTATCA-AA-CAAAAAAAGGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAANTCAGTTTACAAAATTGAAAAATA--TGTAGC-CTTTAAACAACTGAAAGATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAANCTCTCTAGTTGTACC------AACATTCTAC-TA---TATTGACAAAAANTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGANATATATATACATATCAT--AT--GTATATNTT------------T--------------GTGA-TGCCCTTCCTTTTTTCTTCTG-TTGTCTATGT--------------AAAAAA--TGTTG----TTNTCTTTTGTGCTTATAA----CAATAT------AATGTAAATAANATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAA--ATG--------TTTTCT-GG-TTATACTAGTATTGG-AAT-AAAATACATGTAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCAAGTATCAACTAGTCAATTCCTTTCATAA--TTTG---TTTTTTACTCATATTTTCATGACTANCTTGAAATACTAG--------TNTAA-CATT-----CTA--------AATGTTAAT-----A-AATTTT---CAGA------TGTA---AAG-------------------------TAACATTAATTGTAACAATTGCCTTTTGTCCCTTAA-AA-ATAAACTTACACCATTCTAAATACACTTNATTAATATA-CTA-GT--ATATN-CAAATTGTT-A------------CTTTTATCTTT--AGA-TTTCTTTAT---TATTGTCTTGCCGT-ATACCGACAG-AAGTCAA-TAATANTNTGTTGAATACAA---TN---TTTAAAAAAAGA-AACCATTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACC----------AAA----------------GACA-----ACA---TTGTTTG----------------GTT-GTTTTT--------------T-TG--TTTGTTCCATATATC------A----TATGTAGAGATAAT-GT-------AT-------AT--------A-----------AA--A---AA------T-----TTT-CTCTCT-CCAATTTGCATGGTG--ACAGA-A--AAAC-GAAAAA----AAA--AACTTCTAAAATTCT-GAGATAAAAACATCTCTA---ATAATTTTTAGAAATAGTGCTTCCGAAGAAAAATATACATGCAGAATGGAGAGAGAAGA--A---AA--AA-A--A-----C--CTA----T----TTA----T--T--GA---ACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATC--CATT-ATTACTT-----A-TCAAA--TTATATCT
Reference ( gi|1 ) : ATGAAAATTTCCATCTCTTAAAATTGTAGTTTTTGTGATAAATCTGTAGAAACCATTAAACGTCTTTTCTATGATTGTGAAATATCAAAGACATTTTAGGCAAACCTATCAATTTTCAT----AA-AAA-----A-TAGATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATGTAACTCTAGGGAATAATAACTATGATTTAAG--ACT------------AA-A-------------CTGGGAAAATATCAAAATT-TATATTCTATCAAAAACAAAAAAAATGTAGAACCATAT----TGTGTCAATTTTATAAATAACTTAAATTCAGTTTACAAAATTGAAAAAAAAATGTA-C-CTTTAATTAACTTAAAGATTTGCACTTTAACAAAATTTGGAAACATTACATAAGTATAAGTTCTGAACCTCTCTAGTTGTACA------AACCTTCTAC-TA---TATTGACAAAACTTATTATGTGAACTATTGTTATAATGAATTATCTGAGTATGTATATACATCTGTTGATATATATATACATATCAT--AT--GTATATATT------------T--------------GTGA-TGCCCTTCATTTTTTCTTCTG-TTGTTTATGT--------------AAAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATAT-----TAATGTAAATAACATAT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCAAT-AAACAATGAAACAAACACATTTCAAATCATCATGAGTTTATGAAA--ATG--------TTTCCT-GG-TAATACTAGTATTGG-AAT-AAAATACATATAAAACTAAGCTACTTTTAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATAGCATGAATCAATTGATCAATTCCTTTCATAAAATTTGGTCTTTTTTACTTATATTTCCATGACTAGCTTGAAATACTAG--------TGTAA-CATT-----CTA--------AATGTT--T-----A-AATTTT---TAAA------TGTA---AAG-------------------------TAACATTAACTGTAACAATTGCTTTTTGCCCCTTACTAA-ATGAACTTACACCATCCTTAATACACTCAATTAATATA-CTA-GA--ACATG--AGAGTATT-A------------CTTT-ATCTTT--ATA-TTTCTTTAT---TGTTGCCTTGCCAT-ATACCAACAG-AAGACAA-TAATACTATGTTGAATACAA---TT---TTTCAAAAAAGA-AACCACTATCATTTCATACCCTTTAAA-AGAATAGCATCTGGAAAT--TAAAA-A------CTTTTC-ATCAAATAGGCCTCTT-CCACC----------AAA----------------GACA-----ACA---CTGTTTG----------------GTT-GTTTTT--------------T-TG--TTTGTTGCATATATC------A----CATGTAGAGATGAT-GT-------GT-------AT--------A-----------AA--A---AA------T-----CCT-CTCTCT-TCAGTCTGCATGGTG--ACTGA-ATGAAATTGAAAAAG---AAA--AACTTCTAAAATTC--GGGATGAAAACATCTGTA---ATAATTTTTAGAAATATTGCTTCTGAAGCAAAATATACATGCAGAATGAGGAGAGAATA--A---AA--AA-A--A-----C--CTA----T----TTA--G-T--T--GA---ATTGTTAAATAAAA-AG-AAAAAATG-T-T---ATAATC--CATT-ATTACTTATCTTACTTAAA--TTATATTT
gi|4 : CCTATCAATTTTCAT----AA-AAA-----AATAATTGTCATAAAGTAATATCTAATTGGTCAGTTTCAGATATAATTCTAGGGAATAATAATTATGGTTTTACTTACT------------AA-ATAAAATTTTGATACTGGCAAAATACCACTGTGACATATTCTATCACAAACCAAAAAAGGGTAGAACCATCTAAAATGTGTCAATTTTATAAATTACTTAAATTAATTTTACAAAATTGAAAAATA--TGTAGC-CTTAAAACAACTAAAAGGTTTACACTTTAACAAAATTTGGAAACATTACATAAACATAATTTCTGAACCTCTCTAGTTGTACC------AACATTCTACCTACTTTATTGACAAAAAATATTATGTGGACTATTGTTTCAATGAATAATCTGA----GTATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--NN--NNNNNNNNN------------N--------------NNNN-NNNNNNNNNNNNTTTGATACGAGTGTCTGTG------------------------ATTG----CCTTCCTTTTTTCTTCT---------TTC-----TA-TGTAAAAAAAATGT---------TG-CTCTACTTACAC---CTTCT---CAATTTTTGCTTCACT-ATACAATGAAACAAACAAATTTTAAATTATCATGAGGCTATGAAA--ATGTGTTTTAATTTTCTGGG-TTATACTAGTATTGG-AAT-AAAATACATGTACAATT-AGCTACTTTAAGA
gi|2 : ttttttcagtttttttaaacaattaacaacttttATCAATTTTCATCAGTAATAAATGTTTA-TAAATGTACTAATGTGATAACTAATTAGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAAT--ACTTAATAAAATTTTAATA-------------CTGGGAAAATAGCA------CATGTTCTATCAAAATCAAAAAAAG-GTGGAACCATCT----TGTATCAATTTTATAAATTACTTAAACTCAGTTTACAAAATTGA----AAGATATA-----------------------TGCACTTTAACAACATTTGGAAACATTTCATAAGCATAATTTCTGAAACTCTCTAGTTATACC------AACATTCTAC-AA---TATTGACAAAAACTATTATGTTGACTACTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGAT-T-TATATACATA--AT--ATTAGTATATATT------------TTGATACGTGTGTCTGTGA-TGCCTTTCCTTTTTTTTTCTG-TTGTCTATGT--------------AAAATA--TGTTG----TTGT-TTTTGTGCTTATAA----CAATAT------AATGAAAATAAATTGT--AATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGATACAAACAAATTTTAAATCATCATGAGGGTATGAAA--ATGTGTTTTACTTTTCT-GGTTTATACTAGTATTGGAAAA-AAAATACATATAAAACT-AGTTCCTTTAAGAagtaaagggtcacatggcaattttta
gi|14 : -A-------------CTGGGAAAATACCA------CATATTCTATC-----CAAAAAAAAAATAGAACAATCT----TGTGTCAATATCAAAAATTACTTAAAATCAGTTGACAAAATTGAAAAATA--T-TA-GACTTTAAACAACTGAAAGATTGACACTTTAACAAAATTTGGAAACATTACAGAAGCATACTTTCTGAACCTCTCTAGTTGTACC------AACATTCTAC-TA---TTTTGACAattaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattggatagcaataatcaactagccaattactctcataacatttggtcttttttactcatagtttcatgacatcttgaaatacaagtataatattcaaaatgtttaaatttttaaatgtaaaataacattaactgtaacaattgttttttgccccttacaaaataaacttacaccatccttaatacactcaattaatatactagtctataagagtattaaagccaaactgtctttatttttagatttcttttttgttgccttatcgtataccaacagaagacaataatagtaagttgtgtacatttttgtttaaaaaaagaaaccactattgtttcatacccttaaaagaatagcatctagaaattaaaaaaaaaaccttaccatcaaataagcctcttccaccaaattgttattcgagaaaaagtcaactttgttgtttttttgtttgttacatatatcgcttgtacagtagagataatgtttataaaatactctctctccagtttgcatggtgacagaaagaaattgaaaaaaaaaccttctaaaattctaggataaaaacatctgtaatatttttttagaaaaatatacacgcggaatgaagagagaagaaaaaaacactatttaag
gi|8 : GTAGC-CTTTAAGCAGCT--AAGATTTGCACTTCAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAAACTCTTTAGTTGTACATGTACCAACATTCTAC-TA---TGTTGACAAAAATTATTATGTGCACTATTGTTACAATGAATTGTCTGAGTATGTATATACATTTGC--AGATATATATACATATCATTAAT--ATATATTTTGATAAGAGTGTCT--------------GTGA-TGCCCTTCCTTTTTTCTTCTG-TTGTTTATGT--------------AAAAAA--TGGTG----TTAT---TTGTGCTTATAA----CAATATACCGTTAATGTAAATAACATGT--CATTT--TG-TTCTACCTACAC---CTTCT---CAATGTTTGCTTCACT-AAACAATACAACAAACAATTTTCAAATCATCATGAGGGTATAAAA--ATG--------T
gi|6 : TGTC------------T--------------GTGAATGACCTTC-CTTTTTCTTTTG-TTGTCTATGTCTATTTATGAAAATAAAAAACATGCTGAACGTGTTTTTTTGTGCTTATAAATAACAATAT------GATATAAATAACATGT--CATTT--TT-T-CTATCTACAC---CTTCT---CAATTTTTGCTTCACTAAAACAATGTACCAAACAAATTGTTAGTCTTCATAAGGGTATGAAA--ATG--------TT----------ATACTATTATTGG-AACAAAAATACATGTAAAACT-AGCTATTgttttaattttcta
gi|19 : attttgatacaagTGTGCTTATTA----CAATAT------AATGTAAATGATATGTAACACTTATTTATTCTACCTACGC---CTTCTTCTCAAGTTTTGCATCACT-AAACAATGAAACAAACACATTTTAAATCATCATGAGGATATGAAAGTATG--------TTTaagaattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtatggcacgtatcaactaatcaattcctttcataatttgtttactcatgtttgtgatttgcccaaaatactagtttaacattctaaatgttaataatttttcagatatctgttttctatagatgtaaaggttgagaaacaacc
gi|20 : aatgagtgaaatgTGTACTTATAA----CATTAT-----AAAT-TAAATATTATGT--CATTT--AT-T-CTACCTACACATTCTTCT---CAATTTTTACTACACT-AAACAATCAAAAAAACACATTTAAAATCGTCATGAGGATATGAAA--ATG--------Ttatttttctttgttacacta
gi|3 : ataCTGGTATTGG-AAT-GAAATACATAAAAATCT-AGCTACTTTgttttaattttctttgttatact
gi|2 : gataggataatgtgttttaattttGGATAGCAATAATCAACTAGCCAATTACTCTCATAACATTTGGTCTTTTTTACTCATAGTTTCATGAC-ATCTTGAAATACAAG--------TATAA-TATT-----CAA--------AATGTT--T-----A-AATTTT---TAAA------TGTA---AAA-------------------------TAACATTAACTGTAACAATTGTTTTTTGCCCCTTACAAA-ATAAACTTACACCATCCTTAATACACTCAATTAATATA-CTA-GT--CTATA--AGAGTATT-AAAGCCAAACTGTCTTT-ATTTTT--AGA-TTTCTTTTT---TGTTGCCTTATCGT-ATACCAACAG-AAGACAA-TAATAGTAAGTTGTGTACAT---TTTTGTTTAAAAAAAGA-AACCACTATTGTTTCATACCC-TTAAA-AGAATAGCATCTAGAAAT--TAAAA-AAAAAACCTTACC-ATCAAATAAGCCTCTT-CCACC----------AAATTGTTATTC-------GAGA-----AAAAGTCAACTTT----------------GTT-GTTTTT--------------T-TG--TTTGTTACATATATCGCTTGTA----CA-GTAGAGATAAT-GT-------TT-------AT---------------------A--A---AA------T-----ACT-CTCTCT-CCAGTTTGCATGGTG--ACAGA-AAGAAATTGAAAAA----AAA--ACCTTCTAAAATTCT-AGGATAAAAACATCTGTA---AT-ATTTTT-------TT--------AGAAAAATATACACGCGGAATGAAGAGAGAAGA--A---AA--AA-A--C-----A--CTA----T----TTA--acgaattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaatatgttcaagactaccttgaaataatagtttaacattgtaaatattgataactattaaatgaaatgtttcagatataattttccatagatgtaaaggttaagaaacaacctgaaaaatatataacattaattgtaacaactgacttttgtcccttaaatatacacttacactattctaaatatatttaattaatataactaagagtataccaaattattgattttatccttagactttttttattatagtctttattataccgacaataagtcaataataatttgttgaatacaattgttaaaaaacgaaaccattattttcaaaccatttaaaagaatagcatttagaaataaaaaaaaccttcatcaaataggccttttccaccaaaatagtattcgagaaaaagacatccttgtttgttttttatgtttgtttcatatatcatttgtagagataatagttatatacatataaaataaataataatctttctctctcaatatgcacggtgacaaacaaaaatagaaaacaacccttaaaattctaagataaaaacagtattcataatattagaaatagtgcttctgaagaaaagtatacacacagaatggagagaaaagaagatgaaaacctgtttatctacgaacagataaataaagataacaaatgtttcgatctattattactttcaaaatatatctatttc
gi|5 : atcaattttcatcagtaataaatgtttataaatgtactaatgtgataactaattagtcggtttcagatataattctagggaataataactatgatttaatacttaataaaattttaatactgggaaaatagcacatgttctatcaaaatcaaaaaaaggtggaaccatcttgtatcaattttataaattacttaaactcagtttacaaaattgaaagatatatgcactttaacaacatttggaaacatttcataagcataatttctgaaactctctagttataccaacattctacaatattgacaaaaactattatgttgactactgttacaatgaattatctgagtatgtatatacatttgcagatttatatacataatattagtatatattttgatacgtgtgtctgtgatgcctttcctttttttttctgttgtctatgtaaaatatgttgttgtttttgtgcttataacaatataatgaaaataaattgtaatttttttctacctacaccttctcaatttttgcttcactaaacaatgatacaaacaaattttaaatcatcatgagggtatgaaaatgtgttttacttttctggtttatactagtattggaaaaaaaatacatataaaactagttcctttaagaattaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattGGCTGGCAAGTAACAGCTAGTCAAATC-TTTCATA----------TTTTTTTCTCATATTTTCATGACTAGCTTG-----------------------CAT--------A--------GATGTT--------A-AATTTG---GAAAACAACCTGAACTTATG-------------------------TAACATTAATTGTAACAATTGCCGATTGTCCCTTA--AACATACATTTACACCATATTAAATACACT----TAATATT-CCA-AACAATATGTCAACTTGTT-A------------TTTTTATCTTTTGATA-TTT--TTATGAATATTGTCTCGCCAT-A----AACTG-AAGTCAG-TTTTACTATGTTGAATAAAAAAATC--------AAAAATA-AATCATTAGT-TTTCATACCCTTTAAA--GTATAACATCTTGATAC--TAAAA-A------CTGTTT-ATCAAATAGTGTTTTT-TTATTATAATTCGAGAAA----------------AAAA-----AAA---CT-T------------------------TTTTT--------------T-TG--TAT----CACATGTC------A----TATGTACAGATAAT-GT-------AT-------AT--------ATG---------AA--ATATAG------T-----TTTATTCTTT-CCAATTTACATGGCG--A---A-AGAAAAACGAAAAAA---CAA--Aag
gi|6 : aaattaaaaggatacatggcaaattcattctgttttaacaaacactgcttcttgagaacggtttaacacggatatagaacagctctgtgacgtttatcaaactcttaactttgctggtagattgtaaaagggacaaatcactcggaaattatttaaaaacattttttATGGCACGTATCAACTAATCAATTCCTTTCATAA--TTTG------TTTACTCATGTTT--GTGATTTGCCCAAAATACTAG--------TTTAA-CATT-----CTA--------AATGTTAAT-----A-ATTTTT---CAGA------TAT
gi|3 : attttgatacaagtgtctgtgaatgaccttcctttttcttttgttgtctatgtctatttatgaaaataaaaaacatgctgaacgtgtttttttgtgcttataaataacaatatgatataaataacatgtcattttttctatctacaccttctcaatttttgcttcactaaaacaatgtaccaaacaaattgttagtcttcataagggtatgaaaatgttatactattattggaacaaaaatacatgtaaaactagctattaagaattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtATATGTTCAAGACTACCTTGAAATAATAGTTTAACATTGTAAATATTGATAACTATTAAATGAAATGTT--TCAGATATAATTTTCCATAGA------TGTA---AAGGTTAAGAAACAACCTGAAAAATATATAACATTAATTGTAACAACTGACTTTTGTCCCTTA--AATATACACTTACACTATTCTAAATATATTTAATTAATATAACTAAGA--GTATACCAAATTATTGA------------TTTT-ATCCTT--AGACTTTTTTTAT---TATAGTCTT--TATTATACCGACAATAAGTCAA-TAATAATTTGTTGAATACAA---TT---GTTAAAAAACGA-AACCATTAT--TTTCAAACCATTTAAA-AGAATAGCATTTAGAAATAAAAAAA-A------C-CTTC-ATCAAATAGGCCTTTT-CCACC----------AAAATAGTATTC-------GAGAAAAAGACA----TCCTTG----------------TTT-GTTTTT--------------TATG--TTTGTTTCATATATC------A----TTTGTAGAGATAATAGTTATATACAT-------AT--------A-----------AAATA---AA------TAATAATCT-TTCTCTCTCAATATGCACGGTG--AC-------AAACAAAAATAG---AAAACAACCCTTAAAATTCT-AAGATAAAAACA---GTATTCATAA-TATTAGAAATAGTGCTTCTGAAGAAAAGTATACACACAGAATGGAGAGAAAAGA--A---GATGAA-A--A-----C--CTG----T----TTA--T-C--TACGA---ACAGATAAATAAAG-AT-AACAAATG-T-T---TCGATC--TATT-ATTACTT-------TCAAA--ATATATCctgttttctatagatgtaaaggttgagaaacaacc
gi|23 : gataggataatgtgttttaattttctggtattggaatgaaatacataaaaatctagctactttacgaattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaCTTGAAATACTAG--------TTTAA-CATT-----CTA--------AATGTTAAT-----A-ATTTTT---CAGA------TATatttc
gi|10 : ttgtgatataTTGCCTTCTTATCCTTAA-AA-AGAAACTTACCCCATTCTAATTACACTTTATAAATAT------GT--ATGTC--AAATTGTT-G------------CTTTTATCTTT--AGA-AC-CTTTAT---TATTGTCTTGCCGT-ATACCAACAG-AAATCAATTAAAATT-TGTTGAATACAA---TA---TTT-AAAAAACATAACTACT-TTTTTTCATACCCTTAAAG-AAAATAACATCTAGAAAT--TAAAATAGGC---CTCTTCAAACAAA-ATGTCTTTT-GAGAT----------AAA----------------AACA-----ACA---TTGTT------------------GTT-GTTTTT------------------------TTCCATATATC------ATAATTATGTAGAGAAAAT-GT-------ATATATAAAAT--------A-----------AA--A---AA------TAATC-TTT-CTCTCT-CCAATTTGCAcagttttctatagatgtaaaggttgagaaacaacccgaacgtatgttacatta
gi|7 : CCTTAA-AA-AGAAACTTACCCCATTCTAATTACACTTTATAAATAT------GT--ATGTC--AAATTGTT-G------------CTTTTATCTTT--AGA-AC-CTTTAT---TATTGTCTTGCCAT-ATACCGACAG-AAATCAA-TTAAAATCTGTTGAATACAA---TA---TTTAAAAAACGA-AACTATT----TTTCATACCCTTAAAA-AAAA---CATCTAGAAAT--TA---------------------AAATAGGCCTCTTCCCACA----------AAATGTCATTTGAGATAACGACA-----ACA---TTGT--------------------TT-GTTTTT------------------------TTGCATATATC------A----TATGAAGGGATAAT-GT-------AT-------ATATAAAATAA-----------AA--A---AA------TAATC-TTT-CTCTCT-CCAATTTGCATGGTG--ACAGA-A
gi|18 : atATTTCATATCCTT-AAC-AGAATAATACCTTGATAC--TGCAA-A------CTTTTC-ATCTTATAGGCAATTT-TCATC----------AA--------------------A-----ATG---TTACTTGA---------------G---ATTTTTAAAAAAAACAACACT-TGTTTTTGTTCCATATATC------A----TATATAGAGAT-----------------------T--------A-----------G-----------------------T-TTCTCT-CCAGTTTGCATGGTctcccccccccccccccacacacaaaccttaaattctgagattaaaacactcctaataattttagtgcttccaaagataattatacatgcagaatggagagaaaagaagaaaaaaacctaattctttgtttaaaatattgttaacaatatttatatgtatcaaatttgtaaaatgcactac
gi|21 : TAAATATAATAATACTTAACAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-TCACC----------AA--------------------A-----ATA---TTATTTGAGAAAAAGATAACCATGTTAATTTTT--------------T-TT--TTT----CATATGT------------CATGTAGtaaagaaaaaa
gi|9 : gagaa----------AAA----------------AACA-----ACA---TTATTT-----------------------------------------T-TG--TTT----CATATGTC------A----TATGTAGACATAAT-GCTTA----AT-------AT--------A-----------AA--AT--AA---------------------T-TTAATTTGCACGGTGTAACAGA-AT---CCTAGAAAAA---AAA--CACT--TAATATCCT-GAGATTAAAACGTTTCTT---ATAA-CTTAAGAAATAATGTT------------TATATATACAGAATGGAGAGAGAAGA--AGATAA--CA-A--A-----G--CTG----T----TTATTT-T--T--AA---ACTGATAAATGAAA-AGAAAAAAATGAT-T---A-AATC--TATT-ACTATTTtcttgattttcgtagattgttttaaaata
gi|11 : attattttaaattgtttattttgttatacagtgtaatacctaaaaaataaatatagatactctttgtacagggttttttcccatcaaaatgttattcgagaaaAA----------------GACA-----GCC---TTGTTTG----------------TTTTGTTTTT--------------T-TG--TTTGTTCCATATATC------G----CATGTAGTGATAAT-GT-------AT-------AT--------A-----------AA--AG--AA------T-----CTT-CTCTCT-CCAGTTTGCATGGTG--ACAGAGAT-AAATAGGAAA-----AAA--AACCCCTAAAATTCT-GAGATAAAAACATCTTAA---ATACTTTTTAGAAATAGTGCTTCCAGACAAAAATATATATGCAGAATGAAGGGAGAAGA--A---AA--AACA--ACAACCC--CTA----T----TTA--G-TTAT--AA---ATTGTTAAATAAAA-TG-AAAAAATG-T-T---ATAATC--CATT-ATTACT--------TTAAAATTTATATCtcaaaatacattaca
gi|13 : tgttcaggaggA----------------GATA-----ACC---TTGTTTG----------------TTT-GTTCTC--------------T-TG--TTTGTTATATATATC------A----CATG---------------------------------------------------------------------------T-CTCTCT-CCAATTTGCATGGTG--ACAGA-AAGAAATTAAAAAA------A--AACTTCTAGAATTCTAGAGATAAAACCAATTTTA---ATAAAGTTAAGAAATATTGCTTCCAAAGAAAAATATTCATGCAGATTGAAGAGAGAAGA--A---AA--AATA--A-----T--TTA----A----TTA-------T--GA---ACTATTAAATAAAA-AG-AAAAAA-A-TAT---ATAATC--CATT-ATT---TA----A---AAA--TTATATCatgt
gi|15 : TT-GTTTTT--------------T-TG--TTTGTTCTATATACC------A----TATGTATAGGTAAT-GT-------TT-------AT--------ATAAAACAAAAAAA--A---AA------T-----CTTTCACTCT-CCAGTTTGCATAATG--AC-------AAA---AAAAACCCCAAA--AACCT-TAATATTCT-GAGATAAAAACATCACTA---ATAAGCTT--AAAATAGTGCTTACGAAGAAAAATATACATGtt
gi|12 : ctttctTTTT--------------T-TG--TTTA----ATATATT------A----CATTTAGAGATACT-GT-------AT-------AT--------A-----------AA--C---AA------T-----CTT-CTCTC---CAGTTTGCATGGTG--ATAGAGATAAAA---AGAAAA---AAA--AATTTTTAAAACTCT-GAGATAAAAACATCTCTA---GTAATTTTTAGAAATAATGCTTCCGAAGAAAAATATACATGCAGAAC--GGAGAG-ATA--A---GA--AG-AGTA-----CCTCTA----T----TTA--A-CTAT--GA---ACTGTT-AACAAGATAG-AAAAAATG-T-TACAATAATC--TATT-TTTACT----TTAAT--AA--TTATATCaacataaa
gi|24 : ttaCATATGCC------A----TATATAGAGATAGT-GT-------AT-------AC--------ATAAGTTT----AA--A---AACAATATT-----TTT-CTCTCT-T--ATTTGCACGGTA--Attt
gi|16 : ttttttaaattAATTTACATGGTG--AAAGA-A--AAAC--AACAAC---AAA--AAATC-----ATTCT-GAGATTAAAACATTTCTA---ATAACTTT-AGAAATATTATCTGTAGAGAAAACTAAACATGCAGATTCGAGAGAAACTA--A---GA--AA-C--A-----C--ATG----T----TTAT-GTT--T--GA---ACTGATTAATGTAA-AG-ATAA-----T-T---ATTA-C--CATT-ACTATTTaagaa
gi|17 : AA--AACATGTGGAATTCT-GAGATTAAACCATTTCTA---GTTACATT-AGAAATAGTGTTTCTAAAGAAAACTATACATGTAGAATGGAGAGAAAACAAGA---AA--AA-A--A-----C--TTG----T----TT-----T--T---A---ACTAATAAATGAAA-AG-AATAAATG-A-T---TTAATCTACATGAATTACcaaacatatatct
gi|7 : accttccacttcaatacA--AAC--CTTAAATTCT-GAGATTAAAACACTCCTA---ATAATTTT-AG------TGCTTCCAAAGATAATTATACATGCAGAATGGAGAGAAAAGAAGA---AA--AA-A--A-----C--CTAATTCT----TTG--T-T--T--AAAATATTGTTAAaatttaaaaaatac
gi|22 : atccttaaaaagaaacttaccccattctaattacactttataaatatgtatgtcaaattgttgcttttatctttagaacctttattattgtcttgccatataccgacagaaatcaattaaaatctgttgaatacaatatttaaaaaacgaaactatttttcatacccttaaaaaaaacatctagaaattaaaataggcctcttcccacaaaatgtcatttgagataacgacaacattgtttgtttttttgcatatatcatatgaagggataatgtatatataaaataaaaaaataatctttctctctccaatttgcatggtgacagaactcccccccccccccccacacacTACATGCAGAATATAGATAAAAGA--A---GA--AACA--A-----A--CTA----TAAAATT-----T--T--GA---ACTGATAAATGAAA-AG-A-AAAATG-A-T---TTAATC--TATT-ACAACTTcaatatttatatgtatcaaatttgtaaaatgcactac
Alignments
lowQualScore : 1111111111111111111111111
lowQualScore : 888888888888888 333333333 2 444444444444 3333333 2222 11 11 222222 111 22 111111 888888888888888888888888888 5555555555555555 1111 1 1111 111111 111 111 666666666666666666666666 5555555555 4444444444444444444444444 22222 111 0000000000000000000000000 111 6666666666666666666666666666 1111 111 111 111 1 222222 7777777777777777777777777777777777777777777777777777777777777777777777777777 11111111111111111111 1111 666666666666666666666666666666666666666666666666666666666666 5555555555555555555555555555555 1 11 1 1111111 33333333 111 33333333333
lowQualScore : 222222222222222 7 1 22 1 0 1 0 888888888 7 0 0 777777777777 8888888 66 1111 1 33 3 55 1 4 33 0 1 333333 8 444 1 0 3 66 5 444444 1 111111111111111111111111111 8 5 8888888888888888 99 7777 1 3 1 2222 5 666666 1 77 77 5 5 000 000 5 1 2 66 111111111111111111111111 5 8 8 8 3 4 2 3333333333 3 3 0 1 3 2222222222222222222222222 55555 6 111 0000000000000000000000000 8 888 0 1 7 111 1111111111111111111111111111 77 4444 111 1 2 0 6 4 1 1 3 111 111 3 1 2 3 1 5 0 5 66 0 5 333333 22 5 5 4444444444444444444444444444444444444444444444444444444444444444444444444444 44 88888888888888888888 4 0000 555 3 444444444444444444444444444444444444444444444444444444444444 3 44 555 1111111111111111111111111111111 3 3 6 3 1 7 1 2 222 555 0 44 00 666 55 0 1111111 7777 99999999 3 1 1 0 4 4 444 111 0 0 11111111111 777
lowQualScore : ............... . . .. . . . . ......... . . . ............ ....... .. .... . .. . .. . . .. . . ...... . ... . . . .. . ...... . ........................... . . ................ .. .... . . . .... . ...... . .. .. . . ... ... . . . .. ........................ . . . . . . . .......... . . . . . ......................... ..... . ... ......................... . ... . . . ... ............................ .. .... ... . . . . . . . . ... ... . . . . . . . . .. . . ...... .. . . ............................................................................ .. .................... . .... ... . ............................................................ . .. ... ............................... . . . . . . . . ... ... . .. .. ... .. . ....... .... ........ . . . . . . ... ... . . ........... ...
lowQualScore : 000000000000000 3 0 00 0 7 0 7 000000000 3 0 2 888888888888 5555555 88 2222 0 88 2 88 0 0 88 6 0 000000 0 000 0 2 2 00 8 555555 0 000000000000000000000000000 0 6 8888888888888888 00 0000 0 2 7 1111 7 444444 0 99 99 7 0 000 000 7 3 2 99 000000000000000000000000 0 0 0 0 5 0 5 0000000000 2 8 8 0 3 3333333333333333333333333 55555 7 777 0000000000000000000000000 0 333 3 0 8 777 5555555555555555555555555555 77 0000 777 0 2 7 7 0 0 0 3 777 777 0 0 5 2 4 0 4 0 99 1 0 111111 44 0 0 9999999999999999999999999999999999999999999999999999999999999999999999999999 22 22222222222222222222 6 0000 000 1 666666666666666666666666666666666666666666666666666666666666 1 22 444 5555555555555555555555555555555 6 6 5 6 8 2 3 3 111 888 4 66 00 444 00 9 0000000 7777 55555555 2 0 1 5 0 0 222 000 5 9 33333333333 333
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AA-AAA-----AATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTT-A--TACT-AATAAAATTTTAATACTGGGAAAATACCA-----C------ATATTCTATCA--AAA-CAAAAAAAGGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAAGATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGATATATATATACATATCAT--AT--GTATATNTT------------T--------------GTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACTAAA-CAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAA--ATGTGTTTTA-TTTT-------C-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-ATTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---GATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTAATTAAT---AT-ACT---AGTATGT--------------CAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACAATTTT---TAA---AAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--AA----CGA--AAA-A-AAAAACTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTAT----TTA---T---TGAACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATC------AAA-T-TATATCT
Reference ( family-468 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCATCAGTAATAAATGTTTAATAANTGTNNTAANGTGATANCTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGGTTTNACTTACTTAATAAAATTTTAA-ACTGGGAAAATACCA-----C------ATATTCTATCA--AA--CAAAAAAAGGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAANTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACTGAAAGATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAANCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAANTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGANATATATATACATATCAT--AT--GTATATNTT------------T--------------GTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTNTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAANATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACTAAA-CAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAA--ATG--------TTTT-------C-T-GG-TTATACTAGTATTGG-AAT-AAAATACATGTAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCAAGTATCAACTAGTCAATTCCTTTCATAA--TTTG---TTTTTTACTCATATTTTCATGACTANCTTGAAATACTAGTNTAACATT--------------CTA--------AATGTT---AATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAATTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTNATTAAT---AT-ACT---AGTATATN-------------CAAATTGTTACTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATAATANTNTGTTGAATACAATNTT---TAA---AAAAAGAAACCATTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTCCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAATTTGCATGGTG--ACAGA---A-----------------A--AA----CGA--AAA-A-AAAAACTTCTAAAATTCT-GAGATAAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTAT----TTA---T---TGAACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATC------AAA-T-TATATCT
gi|1 : CCTATCAATTTTCAT-----A-AAA-----AATAGATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATGTAACTCTAGGGAATAATAACTATGATTT------------AAGACT--AA-ACTGGGAAAATATCAAAATTT------ATATTCTATCA--AAAACAAAAAAAATGTAGAACCATAT----TGTGTCAATTTTATAAATAACTTAAATTCAGTTTACAAAATTGAAAAAAAAATGTA-CCTTTAATTAACTTAAAGATTTGCACTTTAACAAAATTTGGAAACATTACATAAGTATAAGTTCTGAACCTCTCTAGTTGTAC------AAACCTTCTA-CTA---TATTGACAAAACTTATTATGTGAACTATTGTTATAATGAATTATCTGAGTATGTATATACATCTGTTGATATATATATACATATCAT--AT--GTATATATT------------T--------------GTGA-TGCCCTTCATTTTTTCTTCTGTTGTTTATGTA--------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATATTA------ATGTAAATAACATAT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCAATAAA-CAATGAAACAAACACATTTCAAATCATCATGAGTTTATGAAA--ATG--------TTTC-------C-T-GG-TAATACTAGTATTGG-AAT-AAAATACATATAAAACTAAGCTACTTTTAGA
gi|1 : atgaaaatttccatctcttaaaattgtagtttttgtgataaatctgtagaaaccattaaacgtcttttctatgattgtgaaatatcaaagacattttaggcaaaGGATAGCATGAATCAATTGATCAATTCCTTTCATAAAATTTGGTCTTTTTTACTTATATTTCCATGACTAGCTTGAAATACTAGTGTAACATT--------------CTA--------AATGTT-----TA-AATTTTT---AAATGTAAAG-------------------------TAACATTAACTGTAACAATTGCTTT-TTGCCCCTTA-CTAAATGAACTTACACCATCCTTAATACACTCAATTAAT---AT-ACT---AGAACATG--------------AGAGTATTACTTT-ATCTTTATA-TTTCTTTAT---TGTTGCCTTGCCATATACCAACAG-AAGACAATAATACTATGTTGAATACAATTTT---TCA---AAAAAGAAACCACTATCATTTCATACCCTTTAAA-AGAATAGCATCTGGAAAT--TAAAA-A------CTTTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACACT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTGCATATATCA----CAT---GTAGAGATGAT-G--T-------GT-------A--------T---------A--AA--A---AAT-------CCT-CTCTCTTCAGTCTGCATGGTG--ACTGA---ATG---------------A--AAT---TGA--AAA-AGAAAAACTTCTAAAATTC--GGGATGAAAACATCTGTAATAATTTTTAGAAATATTGCTTCTGA---AGCAAAATAT--ACATGCAGAATGAGGAGAGAATA--A---AA--AA-AA-----C-CTAT----TTAG--T---TGAATTGTTAAATAAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATCTTACTTAAA-T-TATATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggatagcatgaatcaattgatcaattcctttcataaaatttggtcttttttacttatatttccatgactagcttgaaatactagtgtaacattctaaatgtttaaatttttaaatgtaaagtaacattaactgtaacaattgctttttgccccttactaaatgaacttacaccatccttaatacactcaattaatatactagaacatgagagtattactttatctttatatttctttattgttgccttgccatataccaacagaagacaataatactatgttgaatacaatttttcaaaaaagaaaccactatcatttcataccctttaaaagaatagcatctggaaattaaaaacttttcatcaaataggcctcttccaccaaagacaacactgtttggttgtttttttgtttgttgcatatatcacatgtagagatgatgtgtataaaaaatcctctctcttcagtctgcatggtgactgaatgaaattgaaaaagaaaaacttctaaaattcgggatgaaaacatctgtaataatttttagaaatattgcttctgaagcaaaatatacatgcagaatgaggagagaataaaaaaaacctatttagttgaattgttaaataaaaagaaaaaatgttataatccattattacttatcttacttaaattatattt
gi|10 : atgaaaatttccatctcttaaaattgtagtttttgtgataaatctgtagaaaccattaaacgtcttttctatgattgtgaaatatcaaagacattttaggcaaacctatcaattttcataaaaaatagatgtactaatgtaataactaattggtcggtttcagatgtaactctagggaataataactatgatttaagactaaactgggaaaatatcaaaatttatattctatcaaaaacaaaaaaaatgtagaaccatattgtgtcaattttataaataacttaaattcagtttacaaaattgaaaaaaaaatgtacctttaattaacttaaagatttgcactttaacaaaatttggaaacattacataagtataagttctgaacctctctagttgtacaaaccttctactatattgacaaaacttattatgtgaactattgttataatgaattatctgagtatgtatatacatctgttgatatatatatacatatcatatgtatatatttgtgatgcccttcattttttcttctgttgtttatgtaaaaaaatgttgttttcttttgtgcttataacaatattaatgtaaataacatatcatttttttctacctacaccttctcaatttttgcttcaataaacaatgaaacaaacacatttcaaatcatcatgagtttatgaaaatgtttcctggtaatactagtattggaataaaatacatataaaactaagctacttttagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTGCCTTCTTATCC-TTA-A-AAAGAAACTTACCCCATTCTAATTACACTTTATAAAT---AT--------GTATGT--------------CAAATTGTTGCTTTTATCTTTAGA-AC-CTTTAT---TATTGTCTTGCCGTATACCAACAG-AAATCAATTAAAATTTGTTGAATACAATATT---TAA---AAAACATAACTACTTTT-TTTCATACCCTTAAAG-AAAATAACATCTAGAAAT--TAAAATAGGC---CTCTTCAAACAAA-ATGTCTTTT-GAGATA---------A-----------A----------------AACA-----ACATT-GTT-----------GT-----T-GTT--TTT------------------------TTCCATATATCATAATTAT---GTAGAGAAAAT-G--T-------ATATATAAAA--------T---------A--AA--A---AATAATC---TTT-CTCTCTCCAATTTGCA
gi|11 : ---------A-----------A----------------GACA-----GCCTT-GTTT--------G-TT-----TTGTT--TTT--------------T-TG--TTTGTTCCATATATCG----CAT---GTAGTGATAAT-G--T-------AT-------A--------T---------A--AA--AG--AAT-------CTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---G-----------------ATAAA----TAG--GAA-A-AAAAACCCCTAAAATTCT-GAGATAAAAACATCTTAAATACTTTTTAGAAATAGTGCTTCCAG---ACAAAAATAT--ATATGCAGAATGAAGGGAGAAGA--A---AA--AACAACAACCC-CTAT----TTAG--TTA-TAAATTGTTAAATAAAA-TG-AAAAAATG-T-T---ATAATCCATTATTACTT---TA------AAATT-TATATCT
gi|12 : tgttcaggaggT--TTT--------------T-TG--TTTA----ATATATTA----CAT---TTAGAGATACT-G--T-------AT-------A--------T---------A--AA--C---AAT-------CTT-CTCTC--CAGTTTGCATGGTG--ATAGAGATA-----------------A--AA----AGA--AAA-A-AAAA-TTTTTAAAACTCT-GAGATAAAAACATCTCTAGTAATTTTTAGAAATAATGCTTCCGA---AGAAAAATAT--ACATGCAGAACGGAGAGATAAGA--A---GA--GT-AC-----CTCTAT----TTAAC-TA--TGAACTGTT-AACAAGATAG-AAAAAATG-T-TACAATAATCTATTTTTACTTTAAT--------AA-T-TATATCTatgt
gi|13 : tta-----------A----------------GATA-----ACCTT-GTTT--------G-TT-----T-GTT--CTC--------------T-TG--TTTGTTATATATATCA----CAT---GT--------------------------------------------------------------------------CTCTCTCCAATTTGCATGGTG--ACAGA---A-----------------A--GA-----AATTAAA-A-AAAAACTTCTAGAATTCTAGAGATAAAACCAATTTTAATAAAGTTAAGAAATATTGCTTCCAA---AGAAAAATAT--TCATGCAGATTGAAGAGAGAAGA--A---AA--AATAA-----T-TTAA----TTA-------TGAACTATTAAATAAAA-AG-AAAAAA-A-TAT---ATAATCCATTAT---TT--A-A------AAA-T-TATATCTttt
gi|14 : -ACTGGGAAAATACCA-----C------ATATTCTATC-------CAAAAAAAAAATAGAACAATCT----TGTGTCAATATCAAAAATTACTTAAAATCAGTTGACAAAATTGAAAAATA--T-TAGACTTTAAACAACTGAAAGATTGACACTTTAACAAAATTTGGAAACATTACAGAAGCATACTTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TTTTGACAtt
gi|15 : T-----T-GTT--TTT--------------T-TG--TTTGTTCTATATACCA----TAT---GTATAGGTAAT-GTTT-------AT-------A--------TAAAACAAAAA--AA--A---AATC------TTT-CACTCTCCAGTTTGCATAATG--ACAAA---A-----------------A--AAACCCC----------AAAAACCT-TAATATTCT-GAGATAAAAACATCACTAATAAGCTT--AAAATAGTGCTTACGA---AGAAAAATAT--ACATG
gi|16 : ctttctAATTTACATGGTG--AAAGA---A-----------------A--AA----CAA--CAACA-AAAAA--TC----ATTCT-GAGATTAAAACATTTCTAATAACTTT-AGAAATATTATCTGTAG---AGAAAACTAA--ACATGCAGATTCGAGAGAAACTA--A---GA--AA-CA-----C-ATGT----TTATGTT---TGAACTGATTAATGTAA-AG-ATAA-----T-T---ATTA-CCATTACTATT----TC------AAA-CATATATCTaacataaa
gi|17 : AAAACATGTGGAATTCT-GAGATTAAACCATTTCTAGTTACATT-AGAAATAGTGTTTCTAA---AGAAAACTAT--ACATGTAGAATGGAGAGAAAACAAGA---AA--AA-AA-----C-TTGT----TT----T---T-AACTAATAAATGAAA-AG-AATAAATG-A-T---TTAATCTA-CATGAATT--A-C------AAT-T-TA
gi|18 : accttccacttcaatac-TTTCATATCCTT-AAC-AGAATAATACCTTGATAC--TGCAA-A------CTTTTC-ATCTTATAGGCAATTT-TCATCA---------A-------------------------------A-----ATGTT-ACTT--------GAG--------ATT--TTTAAAAAAAACAACACT-TGTTTTTGTTCCATATATCA----TAT---ATAGAGAT---------------------------------T---------A--G-------------------T-TTCTCTCCAGTTTGCATGGTT--AAAGA---A-----------------A--AA----aaaaatac
gi|19 : aTGTGCTTATTA----CAATA-TA------ATGTAAATGATATGTAACACTTATTTATTCTACCTACGC---CTTCTTCTCAAGTTTTGCATCACTAAA-CAATGAAACAAACACATTTTAAATCATCATGAGGATATGAAAGTATG--------TTTTATTTTTCT-T-TG-TTACACTAa
gi|2 : aatgagtgaaatgATCAATTTTCATCAGTAATAAATGTTTA-TAAATGTACTAATGTGATAACTAATTAGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACTTAATAAAATTTTAATACTGGGAAAATAGCA-----C------ATGTTCTATCA--AAATCAAAAAAAGG-TGGAACCATCT----TGTATCAATTTTATAAATTACTTAAACTCAGTTTACAAAATTGAAAGATA--TAT------------------------GCACTTTAACAACATTTGGAAACATTTCATAAGCATAATTTCTGAAACTCTCTAGTTATAC------CAACATTCTA-CAA---TATTGACAAAAACTATTATGTTGACTACTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGA--TTTATATACATA--AT--ATTAGTATATATT------------TTGATACGTGTGTCTGTGA-TGCCTTTCCTTTTTTTTTCTGTTGTCTATGT---------------AAAAT-ATGTTG----TTGT-TTTTGTGCTTATAA----CAATA-TA------ATGAAAATAAATTGT--AATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACTAAA-CAATGATACAAACAAATTTTAAATCATCATGAGGGTATGAAA--ATGTGTTTTACTTTT-------C-T-GGTTTATACTAGTATTGGAAAA-AAAATACATATAAAACT-AGTTCCTTTAAGA
gi|2 : GGATAGCAATAATCAACTAGCCAATTACTCTCATAACATTTGGTCTTTTTTACTCATAGTTTCATGAC-ATCTTGAAATACAAGTATAATATT--------------CAA--------AATGTT-----TA-AATTTTT---AAATGTAAAA-------------------------TAACATTAACTGTAACAATTGTTTT-TTGCCCCTTACA-AAATAAACTTACACCATCCTTAATACACTCAATTAAT---AT-ACT---AGTCTATAAGAGTATTAAAGCCAAACTGTC---TTTATTTTTAGA-TTTCTTTTT---TGTTGCCTTATCGTATACCAACAG-AAGACAATAATAGTAAGTTGTGTACATTTTTGTTTAA---AAAAAGAAACCACTATTGTTTCATACCC-TTAAA-AGAATAGCATCTAGAAAT--TAAAA-AAAAAACCTTACC-ATCAAATAAGCCTCTT-CCACCA---------AATTGTTATTCGA----------------GAAA-----AAGTCAACTT--------T-GT-----T-GTT--TTT--------------T-TG--TTTGTTACATATATCGCT--TGTACAGTAGAGATAAT-G--T-------TT-------A--------T-------------A--A---AAT-------ACT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--GAAAT-TGA--AAA-A-AAAACCTTCTAAAATTCT-AGGATAAAAACATCTGTAAT-ATTTTT-----------TT-------AGAAAAATAT--ACACGCGGAATGAAGAGAGAAGA--A---AA--AA-AC-----A-CTAT----TTA---attaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattggatagcaataatcaactagccaattactctcataacatttggtcttttttactcatagtttcatgacatcttgaaatacaagtataatattcaaaatgtttaaatttttaaatgtaaaataacattaactgtaacaattgttttttgccccttacaaaataaacttacaccatccttaatacactcaattaatatactagtctataagagtattaaagccaaactgtctttatttttagatttcttttttgttgccttatcgtataccaacagaagacaataatagtaagttgtgtacatttttgtttaaaaaaagaaaccactattgtttcatacccttaaaagaatagcatctagaaattaaaaaaaaaaccttaccatcaaataagcctcttccaccaaattgttattcgagaaaaagtcaactttgttgtttttttgtttgttacatatatcgcttgtacagtagagataatgtttataaaatactctctctccagtttgcatggtgacagaaagaaattgaaaaaaaaaccttctaaaattctaggataaaaacatctgtaatatttttttagaaaaatatacacgcggaatgaagagagaagaaaaaaacactatttaag
gi|20 : atcaattttcatcagtaataaatgtttataaatgtactaatgtgataactaattagtcggtttcagatataattctagggaataataactatgatttaatacttaataaaattttaatactgggaaaatagcacatgttctatcaaaatcaaaaaaaggtggaaccatcttgtatcaattttataaattacttaaactcagtttacaaaattgaaagatatatgcactttaacaacatttggaaacatttcataagcataatttctgaaactctctagttataccaacattctacaatattgacaaaaactattatgttgactactgttacaatgaattatctgagtatgtatatacatttgcagatttatatacataatattagtatatattttgatacgtgtgtctgtgatgcctttcctttttttttctgttgtctatgtaaaatatgttgttgtttttgtgcttataacaatataatgaaaataaattgtaatttttttctacctacaccttctcaatttttgcttcactaaacaatgatacaaacaaattttaaatcatcatgagggtatgaaaatgtgttttacttttctggtttatactagtattggaaaaaaaatacatataaaactagttcctttaagaattaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattTGTACTTATAA----CATTA-TA------AATTAAATATTATGT--CATTT--AT-T-CTACCTACACATTCTTCT---CAATTTTTACTACACTAAA-CAATCAAAAAAACACATTTAAAATCGTCATGAGGATATGAAA--ATGTGTTTTAATTTT-------CTT-TG-TTATACTag
gi|21 : ataTAAATATAATAATACTTAACAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-TCACCA---------A-------------------------------A-----ATATT-ATTTGAGAAAAAG-ATAACCAT-GTTAATTT--------------T-T---TTT-TTTCATATGTC------AT---GTAG
gi|22 : gagaaATAATGTCCTCGATTTAGAGAAATCTTTACATGCAGAATATAGATAAAAGA--A---GA--AACAA-----A-CTATAAAATT----T---TGAACTGATAAATGAAA-AG--AAAAATG-A-T---TTAATCTATTACAACTT--tcttgattttcgtagattgttttaaaata
gi|23 : CTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-ATTTTTC---AGATATtaaaaaa
gi|24 : ttgtgatataTTCATATGCCA----TAT---ATAGAGATAGT-G--T-------AT-------ACATAAGTTT---------A--AA--AAC-AATA------TTT-TTCTCTCTTATTTGCACGGTA--AAAGA---A-----------------cagttttctatagatgtaaaggttgagaaacaacccgaacgtatgttacatta
gi|3 : ttttttaaaGATAGGATA--ATG--------TGTT-------T-T-AA-TTTT-CTGGTATTGG-AAT-GAAATACATAAAAATCT-AGCTACTTTACGA
gi|3 : ATATGTTCAAGACTACCTTGAAATAATAGTTTAACATTGTAAATATTGATAACTATTAAATGAAATGTTTCAGATATAATTTTCCATAGATGTAAAGGTTAAGAAACAACCTGAAAAATATATAACATTAATTGTAACAACTGACTT-TTGTCCCTTA-A-ATATACACTTACACTATTCTAAATATATTTAATTAAT---ATAACTAAGAGTATA-C-------------CAAATTATTGATTTTATCCTTAGACTTTTTTTAT---TATAGTCTT-TATTATACCGACAATAAGTCAATAATAATTTGTTGAATACAATTGT---TAA---AAAACGAAACCATTA-T-TTTCAAACCATTTAAA-AGAATAGCATTTAGAAATAAAAAAA-A------C-CTTC-ATCAAATAGGCCTTTT-CCACCA---------A-----------AATAGTATTC-------GAGAAAAAGACATC--CTT--------G-TT-----T-GTT--TTT--------------TATG--TTTGTTTCATATATCA----TTT---GTAGAGATAATAG--TTATATACAT-------A--------T---------A--AAATA---AATAATAATCTTT-CTCTCT-CAATATGCACGGTG--ACAAA---C-----------------A--AA----AAT--AGA-A-AACAACCCTTAAAATTCT-AAGATAAAAACAGTATTCATAA-TATTAGAAATAGTGCTTCTGA---AGAAAAGTAT--ACACACAGAATGGAGAGAAAAGA--A---GATGAA-AA-----C-CTGT----TTA---TCTACGAACAGATAAATAAAG-AT-AACAAATG-T-T---TCGATCTATTATTACTT---TC------AAA-A-TATATCTattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaatatgttcaagactaccttgaaataatagtttaacattgtaaatattgataactattaaatgaaatgtttcagatataattttccatagatgtaaaggttaagaaacaacctgaaaaatatataacattaattgtaacaactgacttttgtcccttaaatatacacttacactattctaaatatatttaattaatataactaagagtataccaaattattgattttatccttagactttttttattatagtctttattataccgacaataagtcaataataatttgttgaatacaattgttaaaaaacgaaaccattattttcaaaccatttaaaagaatagcatttagaaataaaaaaaaccttcatcaaataggccttttccaccaaaatagtattcgagaaaaagacatccttgtttgttttttatgtttgtttcatatatcatttgtagagataatagttatatacatataaaataaataataatctttctctctcaatatgcacggtgacaaacaaaaatagaaaacaacccttaaaattctaagataaaaacagtattcataatattagaaatagtgcttctgaagaaaagtatacacacagaatggagagaaaagaagatgaaaacctgtttatctacgaacagataaataaagataacaaatgtttcgatctattattactttcaaaatatatctatttc
gi|4 : gataggataatgtgttttaattttctggtattggaatgaaatacataaaaatctagctactttacgaattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaCCTATCAATTTTCAT----AA-AAA-----AATAATTGTCATAAAGTAATATCTAATTGGTCAGTTTCAGATATAATTCTAGGGAATAATAATTATGGTTTTACTTACTAAATAAAATTTTGATACTGGCAAAATACCA-----CTGTGACATATTCTATCACAAA--CCAAAAAAGGGTAGAACCATCTAAAATGTGTCAATTTTATAAATTACTTAAATTAATTTTACAAAATTGAAAAATA--TGTAGCCTTAAAACAACTAAAAGGTTTACACTTTAACAAAATTTGGAAACATTACATAAACATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTACCTACTTTATTGACAAAAAATATTATGTGGACTATTGTTTCAATGAATAATCTGAGTATG---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--NN--NNNNNNNNN------------N--------------NNNN-NNNNNNNNNNNTTTGATACGAGTGTCTGTG------------------------ATTG----CCTTCCTTTTTTCTTCT--------TTC-TA-------TGTAAAAAAAATG-------T--TG-CTCTACTTACAC---CTTCT---CAATTTTTGCTTCACTATA-CAATGAAACAAACAAATTTTAAATTATCATGAGGCTATGAAA--ATGTGTTTTAATTTT-------C-TGGG-TTATACTAGTATTGG-AAT-AAAATACATGTACAATT-AGCTACTTTAAGAatttc
gi|5 : ttttttcagtttttttaaacaattaacaacttttGGCTGGCAAGTAACAGCTAGTCAAATC-TTTCATA----------TTTTTTTCTCATATTTTCATGACTAGCTTGCA----TAG------ATG--------------TTA--------AAT-TT---GGAA-AACAACC---TGAACTTATG-------------------------TAACATTAATTGTAACAATTGCCGA-TTGTCCCTTA-A-ACATACATTTACACCATATTAAATACACTTAAT--ATTCCAA-AC----AATATGT--------------CAACTTGTTATTTTTATCTTTTGA-TATTTTTATGAATATTGTCTCGCCATA----AACTG-AAGTCAGTTTTACTATGTTGAATAAAA--------AAATCAAAAATAAATCATTAGT-TTTCATACCCTTT-AA-AGTATAACATCTTGATAC--TAAAA-A------CTGTTT-ATCAAATAGTGTTTTT-TTATTATAATTCGAGA-----------A----------------AAAA-----AAA--------------------------ACT--TTT--------------T-T---TTTGTATCACATGTCA----TAT---GTACAGATAAT-G--T-------AT-------A--------T---------ATGAA--ATATAGT-------TTTATTCTTTCCAATTTACATGGCG--AAAGA---A-----------------A--AA----CGA--AAA-A-ACAAAagtaaagggtcacatggcaattttta
gi|6 : aaattaaaaggatacatggcaaattcattctgttttaacaaacactgcttcttgagaacggtttaacacggatatagaacagctctgtgacgtttatcaaactcttaactttgctggtagattgtaaaagggacaaatcactcggaaattatttaaaaacattttttTGTC------------T--------------GTGAATGACCTTCCTTTTT-CTTTTGTTGTCTATGTCTATTTATGAAAATAAAAAACATGCTGAACGTGTTTTTTTGTGCTTATAAATAACAATA-TG------ATATAAATAACATGT--CATTT--TT-T-CTATCTACAC---CTTCT---CAATTTTTGCTTCACTAAAACAATGTACCAAACAAATTGTTAGTCTTCATAAGGGTATGAAA--AT-------------------------G-TTATACTATTATTGG-AACAAAAATACATGTAAAACT-AGCTA--TTAAGA
gi|6 : attttgatacaagATGGCACGTATCAACTAATCAATTCCTTTCATAA--TTTG---TTT---ACTCATGTTT--GTGATTTGCCCAAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-ATTTTTC---AGATATattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtatggcacgtatcaactaatcaattcctttcataatttgtttactcatgtttgtgatttgcccaaaatactagtttaacattctaaatgttaataatttttcagatatctgttttctatagatgtaaaggttgagaaacaacc
gi|7 : attttgatacaagtgtctgtgaatgaccttcctttttcttttgttgtctatgtctatttatgaaaataaaaaacatgctgaacgtgtttttttgtgcttataaataacaatatgatataaataacatgtcattttttctatctacaccttctcaatttttgcttcactaaaacaatgtaccaaacaaattgttagtcttcataagggtatgaaaatgttatactattattggaacaaaaatacatgtaaaactagctattaagaattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtCCTTA-A-AAAGAAACTTACCCCATTCTAATTACACTTTATAAAT---AT--------GTATGT--------------CAAATTGTTGCTTTTATCTTTAGA-AC-CTTTAT---TATTGTCTTGCCATATACCGACAG-AAATCAATTAAAATCTGTTGAATACAATATT---TAA---AAAACGAAAC---TATT-TTTCATACCC-TTAAA-AAA--AACATCTAGAAAT--TA---------------------AAATAGGCCTCTTCCCACAA---------A-----------ATGTCATTTGAGATAACGACA-----ACATT-GT-------------T-----T-GTT--TTT--------------T-TG---------CATATATCA----TAT---GAAGGGATAAT-G--T-------AT-------A--------TATAAAATA-A--AA--A---AATAATC---TTT-CTCTCTCCAATTTGCATGGTG--ACAGA---ACTCCCCCCCCCCCCCCCA--CA----C--------A-CAAACCTT---AAATTCT-GAGATTAAAACACTCCTAATAATTT-------TAGTGCTTCCAA---AGATAATTAT--ACATGCAGAATGGAGAGAAAAGAAGA---AA--AA-AA-----C-CTAA----TTC---T---T----TGTTTA----------AAATATTG-T-TA--ACAAT--ATTTATATGT--ATC------AAA-T-ctgttttctatagatgtaaaggttgagaaacaacc
gi|8 : atGTAGCCTTTAAGCAGCT--AAGATTTGCACTTCAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAAACTCTTTAGTTGTACATGTACCAACATTCTA-CTA---TGTTGACAAAAATTATTATGTGCACTATTGTTACAATGAATTGTCTGAGTATGTATATACATTTGCAGA--TATATATACATATCATTAAT--ATATATTTTGATAAGAGTGTCT--------------GTGA-TGCCCTTCCTTTTTTCTTCTGTTGTTTATGT---------------AAAAA-ATGGTG----TTAT---TTGTGCTTATAA----CAATA-TACCGTTAATGTAAATAACATGT--CATTT--TG-TTCTACCTACAC---CTTCT---CAATGTTTGCTTCACTAAA-CAATACAACAAACAATTTTCAAATCATCATGAGGGTATAAAA--ATG--------TGTT-------T-T-AA-TTtgtaaaatgcactac
gi|9 : A---------A-----------A----------------AACA-----ACATT-ATTT------------------------------------------------TTGTTTCATATGTCA----TAT---GTAGACATAAT-G--CTTA----AT-------A--------T---------A--AA--AT--AAT-------TT----------AATTTGCACGGTGTAACAGA---ATCCT-------------A---------GA--AAA-A-AAACACT--TAATATCCT-GAGATTAAAACGTTTCTTATAA-CTTAAGAAATAATGTT---------------TAT--ATATACAGAATGGAGAGAGAAGA--AGATAA--CA-AA-----G-CTGT----TTATTTT---TAAACTGATAAATGAAA-AGAAAAAAATGAT-T---A-AATCTATTACTATTT---TC------AAA-A-TACATttcta
Alignments
lowQualScore : 1111111111111111111111111
lowQualScore : 2222 444444 55555555555 444444444444 1 111 11 2222 11 22222 222222 111 11 111 1111 666666666666666666666666666 5555555555555555 1111 1 1111 111111 111 111 222 33333333333 4444444444444444444444444 22222 111 0000000000000000000000000 111 44444444444444444444444444 1111 111 1111 1 222222 7777777777777777777777777777777777777777777777777777777777777777777777777777 11111111111111111111 1111 666666666666666666666666666666666666666666666666666666666666 44444444444444444444444444444444 1 11 1 1111111 33333333 111 33333333333
lowQualScore : 8888 000000 11111111111 7 4 0 777777777777 0 999 33 1111 1 33 3 55 1 4 11111 0 333333 8 444 1 0 3 33 000 7777 0 888888888888888888888888888 8 5 8888888888888888 99 7777 1 3 1 2222 5 666666 1 77 3 77 5 000 000 5 1 2 0 222 7777 55 5 1 8 8 8 1 1 2 44444444444 3 0 3 2222222222222222222222222 55555 6 111 0000000000000000000000000 8 888 0 7 111 66666666666666666666666666 1 4444 111 1 2 0 6 1 1 1 5555 2 3 1 5 0 5 66 0 5 333333 22 5 5 4444444444444444444444444444444444444444444444444444444444444444444444444444 44 88888888888888888888 3 0000 555 3 444444444444444444444444444444444444444444444444444444444444 3 44 555 77777777777777777777777777777777 3 3 2 5 3 1 7 1 2 222 555 0 44 00 666 55 0 1111111 7777 99999999 3 1 1 0 4 4 444 111 0 0 11111111111 777
lowQualScore : .... ...... ........... . . . ............ . ... .. .... . .. . .. . . ..... . ...... . ... . . . .. ... .... . ........................... . . ................ .. .... . . . .... . ...... . .. . .. . ... ... . . . . ... .... .. . . . . . . . . ........... . . . ......................... ..... . ... ......................... . ... . . ... .......................... . .... ... . . . . . . . .... . . . . . . .. . . ...... .. . . ............................................................................ .. .................... . .... ... . ............................................................ . .. ... ................................ . . . . . . . . . ... ... . .. .. ... .. . ....... .... ........ . . . . . . ... ... . . ........... ...
lowQualScore : 3333 777777 77777777777 3 0 2 888888888888 0 555 00 2222 2 88 2 88 0 0 22222 6 000000 0 000 2 2 2 88 555 2222 8 000000000000000000000000000 0 6 8888888888888888 00 0000 0 2 7 1111 7 444444 7 99 6 99 7 000 000 7 3 2 1 000 0000 77 7 7 0 0 0 0 0 5 00000000000 8 8 3 3333333333333333333333333 22222 7 777 0000000000000000000000000 0 333 3 8 777 00000000000000000000000000 0 0000 777 0 2 7 7 0 5 0 7777 5 2 4 0 4 0 99 1 0 111111 44 0 0 9999999999999999999999999999999999999999999999999999999999999999999999999999 22 22222222222222222222 0 0000 000 1 666666666666666666666666666666666666666666666666666666666666 1 22 444 44444444444444444444444444444444 6 6 0 7 6 0 2 3 3 111 888 4 66 00 444 00 9 0000000 7777 55555555 2 0 1 5 0 0 222 000 5 9 33333333333 333
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AAAAAA-----ATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAATACTT----AATAAAATTTTGATACTGGGAAAATACCA-----C------ATATTCTATCA-AAA-CNAAAAAAAGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGAT--ATATATATACATATCA-T--ATATAT----------ATGTC------------TGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTAA-TTTT--C-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-A-TTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---GATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTAATTAAT---AT-ACT---AG--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACAATN---TTTAAAAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--AA----CGA--AAA-A-AAAAACTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTAT----TTA---T---TGAACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATC------AAA-T-TATATCT
Reference ( family-468 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AAAAAA-----ATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTA-TACT-----AATAAAATTTTAATACTGGGAAAATACCA-----C------ATATTCTATCA-AAA-CAAAAAAAGGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGAT--ATATATATACATATCA-T--ATGTAT----------ATNTT------------TGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTT-A-TTTT--C-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-A-TTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---GATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTAATTAAT---AT-ACT---AG--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACAATT---TTTAAAAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--AA----CGA--AAA-A-AAAAACTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTAT----TTA---T---TGAACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATC------AAA-T-TATATCT
gi|1 : CCTATCAATTTTCAT----AAAAAA------TAGATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATGTAACTCTAGGGAATAATAACTATGATTTAAGACT-----AA------------ACTGGGAAAATATCAAAATTT------ATATTCTATCA-AAAACAAAAAAAATGTAGAACCATAT----TGTGTCAATTTTATAAATAACTTAAATTCAGTTTACAAAATTGAAAAAAAAATGTA-CCTTTAATTAACTTAAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGTATAAGTTCTGAACCTCTCTAGTTGTAC------AAACCTTCTA-CTA---TATTGACAAAACTTATTATGTGAACTATTGTTATAATGAATTATCTGAGTATGTATATACATCTGTTGAT--ATATATATACATATCA-T--ATGTAT----------ATATT------------TGTGA-TGCCCTTCATTTTTTCTTCTGTTGTTTATGTA--------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATATTA------ATGTAAATAACATAT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCAAT-AAACAATGAAACAAACACATTTCAAATCATCATGAGTTTATGAAAATG---------TTTC--C-T-GG-TAATACTAGTATTGG-AAT-AAAATACATATAAAACTAAGCTACTTTTAGA
gi|1 : atgaaaatttccatctcttaaaattgtagtttttgtgataaatctgtagaaaccattaaacgtcttttctatgattgtgaaatatcaaagacattttaggcaaaGGATAGCATGAATCAATTGATCAATTCCTTTCATAA-AATTTGGTCTTTTTTACTTATATTTCCATGACTAGCTTGAAATACTAGTGTAACATT--------------CTA--------AATGTT-----TA-AATTTTT---AAATGTAAAG-------------------------TAACATTAACTGTAACAATTGCTTT-TTGCCCCTTA-CTAAATGAACTTACACCATCCTTAATACACTCAATTAAT---AT-ACT---AG--AAC------------ATGAGAGTATTACTTT-ATCTTTATA-TTTCTTTAT---TGTTGCCTTGCCATATACCAACAG-AAGACAATAATACTATGTTGAATACAATT---TTTCAAAAAAGAAACCACTATCATTTCATACCCTTTAAA-AGAATAGCATCTGGAAAT--TAAAA-A------CTTTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACACT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTGCATATATCA----CAT---GTAGAGATGAT-G--T-------GT-------A--------T---------A--AA--A---AAT-------CCT-CTCTCTTCAGTCTGCATGGTG--ACTGA---ATG---------------A--AAT---TGA--AAA-AGAAAAACTTCTAAAATTC--GGGATGAAAACATCTGTAATAATTTTTAGAAATATTGCTTCTGA---AGCAAAATAT--ACATGCAGAATGAGGAGAGAATA--A---AA--AA-AA-----C-CTAT----TTAG--T---TGAATTGTTAAATAAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATCTTACTTAAA-T-TATATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggatagcatgaatcaattgatcaattcctttcataaaatttggtcttttttacttatatttccatgactagcttgaaatactagtgtaacattctaaatgtttaaatttttaaatgtaaagtaacattaactgtaacaattgctttttgccccttactaaatgaacttacaccatccttaatacactcaattaatatactagaacatgagagtattactttatctttatatttctttattgttgccttgccatataccaacagaagacaataatactatgttgaatacaatttttcaaaaaagaaaccactatcatttcataccctttaaaagaatagcatctggaaattaaaaacttttcatcaaataggcctcttccaccaaagacaacactgtttggttgtttttttgtttgttgcatatatcacatgtagagatgatgtgtataaaaaatcctctctcttcagtctgcatggtgactgaatgaaattgaaaaagaaaaacttctaaaattcgggatgaaaacatctgtaataatttttagaaatattgcttctgaagcaaaatatacatgcagaatgaggagagaataaaaaaaacctatttagttgaattgttaaataaaaagaaaaaatgttataatccattattacttatcttacttaaattatattt
gi|10 : atgaaaatttccatctcttaaaattgtagtttttgtgataaatctgtagaaaccattaaacgtcttttctatgattgtgaaatatcaaagacattttaggcaaacctatcaattttcataaaaaatagatgtactaatgtaataactaattggtcggtttcagatgtaactctagggaataataactatgatttaagactaaactgggaaaatatcaaaatttatattctatcaaaaacaaaaaaaatgtagaaccatattgtgtcaattttataaataacttaaattcagtttacaaaattgaaaaaaaaatgtacctttaattaacttaaagatttgcactttaacaaaatttggaaacattacataagtataagttctgaacctctctagttgtacaaaccttctactatattgacaaaacttattatgtgaactattgttataatgaattatctgagtatgtatatacatctgttgatatatatatacatatcatatgtatatatttgtgatgcccttcattttttcttctgttgtttatgtaaaaaaatgttgttttcttttgtgcttataacaatattaatgtaaataacatatcatttttttctacctacaccttctcaatttttgcttcaataaacaatgaaacaaacacatttcaaatcatcatgagtttatgaaaatgtttcctggtaatactagtattggaataaaatacatataaaactaagctacttttagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTGCCTTCTTATCC-TTA-A-AAAGAAACTTACCCCATTCTAATTACACTTTATAAAT---AT--------G--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-AC-CTTTAT---TATTGTCTTGCCGTATACCAACAG-AAATCAATTAAAATTTGTTGAATACAATA---TTTAAAAAACATAACTACTTTT-TTTCATACCCTTAAAG-AAAATAACATCTAGAAAT--TAAAATAGGC---CTCTTCAAACAAA-ATGTCTTTT-GAGATA---------A-----------A----------------AACA-----ACATT-GTT-----------GT-----T-GTT--TTT------------------------TTCCATATATCATAATTAT---GTAGAGAAAAT-G--T-------ATATATAAAA--------T---------A--AA--A---AATAATC---TTT-CTCTCTCCAATTTGCA
gi|11 : ---------A-----------A----------------GACA-----GCCTT-GTTT--------G-TT-----TTGTT--TTT--------------T-TG--TTTGTTCCATATATCG----CAT---GTAGTGATAAT-G--T-------AT-------A--------T---------A--AA--AG--AAT-------CTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---G-----------------ATAAA----TAG--GAA-A-AAAAACCCCTAAAATTCT-GAGATAAAAACATCTTAAATACTTTTTAGAAATAGTGCTTCCAG---ACAAAAATAT--ATATGCAGAATGAAGGGAGAAGA--A---AA--AACAACAACCC-CTAT----TTAG--TTA-TAAATTGTTAAATAAAA-TG-AAAAAATG-T-T---ATAATCCATTATTACTT---TA------AAATT-TATATCT
gi|12 : tgttcaggaggT--TTT--------------T-TG--TTTA----ATATATTA----CAT---TTAGAGATACT-G--T-------AT-------A--------T---------A--AA--C---AAT-------CTT-CTCTC--CAGTTTGCATGGTG--ATAGAGATA-----------------A--AA----AGA--AAA-A-AAAA-TTTTTAAAACTCT-GAGATAAAAACATCTCTAGTAATTTTTAGAAATAATGCTTCCGA---AGAAAAATAT--ACATGCAGAACGGAGAGATAAGA--A---GA--GT-AC-----CTCTAT----TTAAC-TA--TGAACTGTT-AACAAGATAG-AAAAAATG-T-TACAATAATCTATTTTTACTTTAAT--------AA-T-TATATCTatgt
gi|13 : tta-----------A----------------GATA-----ACCTT-GTTT--------G-TT-----T-GTT--CTC--------------T-TG--TTTGTTATATATATCA----CAT---GT--------------------------------------------------------------------------CTCTCTCCAATTTGCATGGTG--ACAGA---A-----------------A--GA-----AATTAAA-A-AAAAACTTCTAGAATTCTAGAGATAAAACCAATTTTAATAAAGTTAAGAAATATTGCTTCCAA---AGAAAAATAT--TCATGCAGATTGAAGAGAGAAGA--A---AA--AATAA-----T-TTAA----TTA-------TGAACTATTAAATAAAA-AG-AAAAAA-A-TAT---ATAATCCATTAT---TT--A-A------AAA-T-TATATCTttt
gi|14 : ACTGGGAAAATACCA-----C------ATATTCTATCC-AAA--AAAAAAA---TAGAACAATCT----TGTGTCAATATCAAAAATTACTTAAAATCAGTTGACAAAATTGAAAAATA--T-TAGACTTTAAACAACTGAAA-GATTGACACTTTAACAAAATTTGGAAACATTACAGAAGCATACTTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TTTTGACAtt
gi|15 : T-----T-GTT--TTT--------------T-TG--TTTGTTCTATATACCA----TAT---GTATAGGTAAT-GTTT-------AT-------A--------TAAAACAAAAA--AA--A---AATC------TTT-CACTCTCCAGTTTGCATAATG--ACAAA---A-----------------A--AAACCCC----------AAAAACCT-TAATATTCT-GAGATAAAAACATCACTAATAAGCTT--AAAATAGTGCTTACGA---AGAAAAATAT--ACATG
gi|16 : ctttctAATTTACATGGTG--AAAGA---A-----------------A--AA----CAA--CAACA-AAAAA--TC----ATTCT-GAGATTAAAACATTTCTAATAACTTT-AGAAATATTATCTGTAG---AGAAAACTAA--ACATGCAGATTCGAGAGAAACTA--A---GA--AA-CA-----C-ATGT----TTATGTT---TGAACTGATTAATGTAA-AG-ATAA-----T-T---ATTA-CCATTACTATT----TC------AAA-CATATATCTaacataaa
gi|17 : AAAACATGTGGAATTCT-GAGATTAAACCATTTCTAGTTACATT-AGAAATAGTGTTTCTAA---AGAAAACTAT--ACATGTAGAATGGAGAGAAAACAAGA---AA--AA-AA-----C-TTGT----TT----T---T-AACTAATAAATGAAA-AG-AATAAATG-A-T---TTAATCTA-CATGAATT--A-C------AAT-T-TA
gi|18 : accttccacttcaatac-TTTCATATCCTT-AAC-AGAATAATACCTTGATAC--TGCAA-A------CTTTTC-ATCTTATAGGCAATTT-TCATCA---------A-------------------------------A-----ATGTT-ACTT--------GAG--------ATT--TTTAAAAAAAACAACACT-TGTTTTTGTTCCATATATCA----TAT---ATAGAGAT---------------------------------T---------A--G-------------------T-TTCTCTCCAGTTTGCATGGTT--AAAGA---A-----------------A--AA----aaaaatac
gi|19 : aTGTGCTTATTA----CAATA-TA------ATGTAAATGATATGTAACACTTATTTATTCTACCTACGC---CTTCTTCTCAAGTTTTGCATCACT-AAACAATGAAACAAACACATTTTAAATCATCATGAGGATATGAAAGTATGTTTT-A-TTTTTCT-T-TG-TTACACTAa
gi|2 : aatgagtgaaatgATCAATTTTCATCAGTAATAAATGTTTATAAATGTACTAATGTGATAACTAATTAGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAATACTT----AATAAAATTTTAATACTGGGAAAATAGCA-----C------ATGTTCTATCA-AAA-TCAAAAAAAGGTGGAACCATCT----TGTATCAATTTTATAAATTACTTAAACTCAGTTTACAAAATTGAAAGATA--TAT-------------------------GCACTTTAACAACATTTGGAAACATTTCATAAGCATAATTTCTGAAACTCTCTAGTTATAC------CAACATTCTA-CAA---TATTGACAAAAACTATTATGTTGACTACTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGATTTATATACATA-ATATTAGT--ATATATTTTGATACGTGTGTC------------TGTGA-TGCCTTTCCTTTTTTTTTCTGTTGTCTATGT---------------AAAAT-ATGTTG----TTGT-TTTTGTGCTTATAA----CAATA-TA------ATGAAAATAAATTGT--AATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGATACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTT-ACTTTT--C-T-GGTTTATACTAGTATTGGAAAA-AAAATACATATAAAACT-AGTTCCTTTAAGA
gi|2 : GGATAGCAATAATCAACTAGCCAATTACTCTCATAACA-TTTGGTCTTTTTTACTCATAGTTTCATGAC-ATCTTGAAATACAAGTATAATATT--------------CAA--------AATGTT-----TA-AATTTTT---AAATGTAAAA-------------------------TAACATTAACTGTAACAATTGTTTT-TTGCCCCTTACA-AAATAAACTTACACCATCCTTAATACACTCAATTAAT---AT-ACT---AGTCTATAAGAGTATTAAAGCCAAACTGT---CTTTATTTTTAGA-TTTCTTTTT---TGTTGCCTTATCGTATACCAACAG-AAGACAATAATAGTAAGTTGTGTACATTTTTGTTTAAAAAAAGAAACCACTATTGTTTCATACCC-TTAAA-AGAATAGCATCTAGAAAT--TAAAA-AAAAAACCTTACC-ATCAAATAAGCCTCTT-CCACCA---------AATTGTTATTCGA----------------GAAA-----AAGTCAACTT--------T-GT-----T-GTT--TTT--------------T-TG--TTTGTTACATATATCGCT--TGTACAGTAGAGATAAT-G--T-------TT-------A--------T-------------A--A---AAT-------ACT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--GAAAT-TGA--AAA-A-AAAACCTTCTAAAATTCT-AGGATAAAAACATCTGTAAT-ATTTTT-----------TT-------AGAAAAATAT--ACACGCGGAATGAAGAGAGAAGA--A---AA--AA-AC-----A-CTAT----TTA---attaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattggatagcaataatcaactagccaattactctcataacatttggtcttttttactcatagtttcatgacatcttgaaatacaagtataatattcaaaatgtttaaatttttaaatgtaaaataacattaactgtaacaattgttttttgccccttacaaaataaacttacaccatccttaatacactcaattaatatactagtctataagagtattaaagccaaactgtctttatttttagatttcttttttgttgccttatcgtataccaacagaagacaataatagtaagttgtgtacatttttgtttaaaaaaagaaaccactattgtttcatacccttaaaagaatagcatctagaaattaaaaaaaaaaccttaccatcaaataagcctcttccaccaaattgttattcgagaaaaagtcaactttgttgtttttttgtttgttacatatatcgcttgtacagtagagataatgtttataaaatactctctctccagtttgcatggtgacagaaagaaattgaaaaaaaaaccttctaaaattctaggataaaaacatctgtaatatttttttagaaaaatatacacgcggaatgaagagagaagaaaaaaacactatttaag
gi|20 : atcaattttcatcagtaataaatgtttataaatgtactaatgtgataactaattagtcggtttcagatataattctagggaataataactatgatttaatacttaataaaattttaatactgggaaaatagcacatgttctatcaaaatcaaaaaaaggtggaaccatcttgtatcaattttataaattacttaaactcagtttacaaaattgaaagatatatgcactttaacaacatttggaaacatttcataagcataatttctgaaactctctagttataccaacattctacaatattgacaaaaactattatgttgactactgttacaatgaattatctgagtatgtatatacatttgcagatttatatacataatattagtatatattttgatacgtgtgtctgtgatgcctttcctttttttttctgttgtctatgtaaaatatgttgttgtttttgtgcttataacaatataatgaaaataaattgtaatttttttctacctacaccttctcaatttttgcttcactaaacaatgatacaaacaaattttaaatcatcatgagggtatgaaaatgtgttttacttttctggtttatactagtattggaaaaaaaatacatataaaactagttcctttaagaattaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattTGTACTTATAA----CATTA-TA------AATTAAATATTATGT--CATTT--AT-T-CTACCTACACATTCTTCT---CAATTTTTACTACACT-AAACAATCAAAAAAACACATTTAAAATCGTCATGAGGATATGAAAATGTGTTTTAA-TTTT--CTT-TG-TTATACTag
gi|21 : ataTAAATATAATAATACTTAACAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-TCACCA---------A-------------------------------A-----ATATT-ATTTGAGAAAAAG-ATAACCAT-GTTAATTT--------------T-T---TTT-TTTCATATGTC------AT---GTAG
gi|22 : gagaaATAATGTCCTCGATTTAGAGAAATCTTTACATGCAGAATATAGATAAAAGA--A---GA--AACAA-----A-CTATAAAATT----T---TGAACTGATAAATGAAA-AG--AAAAATG-A-T---TTAATCTATTACAACTT--tcttgattttcgtagattgttttaaaata
gi|23 : CTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-ATTTTTC---AGATATtaaaaaa
gi|24 : ttgtgatataTTCATATGCCA----TAT---ATAGAGATAGT-G--T-------AT-------ACATAAGTTT---------A--AA--AAC-AATA------TTT-TTCTCTCTTATTTGCACGGTA--AAAGA---A-----------------cagttttctatagatgtaaaggttgagaaacaacccgaacgtatgttacatta
gi|3 : ttttttaaaGATAGGATAATGTGTTTT-AATTTT--C-T-GG-T---------ATTGG-AAT-GAAATACATAAAAATCT-AGCTACTTTACGA
gi|3 : ATATGTTCAAGACTACCTTGAAATAATAGTTTAACATTGTAAATATTGATAACTATTAAATGAAATGTTTCAGATATAATTTTCCATAGATGTAAAGGTTAAGAAACAACCTGAAAAATATATAACATTAATTGTAACAACTGACTT-TTGTCCCTTA-A-ATATACACTTACACTATTCTAAATATATTTAATTAAT---ATAACTAAGAG--TAT------------ACCAAATTATTGATTTTATCCTTAGACTTTTTTTAT---TATAGTCTT-TATTATACCGACAATAAGTCAATAATAATTTGTTGAATACAATT---GTTAAAAAACGAAACCATTA-T-TTTCAAACCATTTAAA-AGAATAGCATTTAGAAATAAAAAAA-A------C-CTTC-ATCAAATAGGCCTTTT-CCACCA---------A-----------AATAGTATTC-------GAGAAAAAGACATC--CTT--------G-TT-----T-GTT--TTT--------------TATG--TTTGTTTCATATATCA----TTT---GTAGAGATAATAG--TTATATACAT-------A--------T---------A--AAATA---AATAATAATCTTT-CTCTCT-CAATATGCACGGTG--ACAAA---C-----------------A--AA----AAT--AGA-A-AACAACCCTTAAAATTCT-AAGATAAAAACAGTATTCATAA-TATTAGAAATAGTGCTTCTGA---AGAAAAGTAT--ACACACAGAATGGAGAGAAAAGA--A---GATGAA-AA-----C-CTGT----TTA---TCTACGAACAGATAAATAAAG-AT-AACAAATG-T-T---TCGATCTATTATTACTT---TC------AAA-A-TATATCTattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaatatgttcaagactaccttgaaataatagtttaacattgtaaatattgataactattaaatgaaatgtttcagatataattttccatagatgtaaaggttaagaaacaacctgaaaaatatataacattaattgtaacaactgacttttgtcccttaaatatacacttacactattctaaatatatttaattaatataactaagagtataccaaattattgattttatccttagactttttttattatagtctttattataccgacaataagtcaataataatttgttgaatacaattgttaaaaaacgaaaccattattttcaaaccatttaaaagaatagcatttagaaataaaaaaaaccttcatcaaataggccttttccaccaaaatagtattcgagaaaaagacatccttgtttgttttttatgtttgtttcatatatcatttgtagagataatagttatatacatataaaataaataataatctttctctctcaatatgcacggtgacaaacaaaaatagaaaacaacccttaaaattctaagataaaaacagtattcataatattagaaatagtgcttctgaagaaaagtatacacacagaatggagagaaaagaagatgaaaacctgtttatctacgaacagataaataaagataacaaatgtttcgatctattattactttcaaaatatatctatttc
gi|4 : gataggataatgtgttttaattttctggtattggaatgaaatacataaaaatctagctactttacgaattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaCCTATCAATTTTCAT----AAAAAA-----ATAATTGTCATAAAGTAATATCTAATTGGTCAGTTTCAGATATAATTCTAGGGAATAATAATTATGGTTT--TACTTACTAAATAAAATTTTGATACTGGCAAAATACCA-----CTGTGACATATTCTATCACAAA-CCAAAAAAGGGTAGAACCATCTAAAATGTGTCAATTTTATAAATTACTTAAATTAATTTTACAAAATTGAAAAATA--TGTAGCCTTAAAACAACT-AAAAGGTTTACACTTTAACAAAATTTGGAAACATTACATAAACATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTACCTACTTTATTGACAAAAAATATTATGTGGACTATTGTTTCAATGAATAATCTGAGTATG---NNNNNNNNNNNNNN--NNNNNNNNNNNNNNNN-N--NNNNNN----------NNNNN------------NNNNN-NNNNNNNNNNNTTTGATACGAGTGTCTGTG------------------------ATTG----CCTTCCTTTTTTCTTCT---------TT-CT------ATGTAAAAAAAATG-------T--TG-CTCTACTTACAC---CTTCT---CAATTTTTGCTTCACT-ATACAATGAAACAAACAAATTTTAAATTATCATGAGGCTATGAAAATGTGTTTTAA-TTTT--C-TGGG-TTATACTAGTATTGG-AAT-AAAATACATGTACAATT-AGCTACTTTAAGAatttc
gi|5 : ttttttcagtttttttaaacaattaacaacttttGGCTGGCAAGTAACAGCTAGTCAAATC-TTTCATA-----------TTTTTTTCTCATATTTTCATGACTAGCTTGCA----TAG------ATG--------------TTA--------AAT-TT---GGAA-AACAACC---TGAACTTATG-------------------------TAACATTAATTGTAACAATTGCCGA-TTGTCCCTTA-A-ACATACATTTACACCATATTAAATACACTTAAT--ATTCCAA-AC----AA--TAT------------GTCAACTTGTTATTTTTATCTTTTGA-TATTTTTATGAATATTGTCTCGCCATA----AACTG-AAGTCAGTTTTACTATGTTGAATAAAAAA---ATCAAAAA--TAAATCATTAGT-TTTCATACCCTTT-AA-AGTATAACATCTTGATAC--TAAAA-A------CTGTTT-ATCAAATAGTGTTTTT-TTATTATAATTCGAGA-----------A----------------AAAA-----AAA--------------------------ACT--TTT--------------T-T---TTTGTATCACATGTCA----TAT---GTACAGATAAT-G--T-------AT-------A--------T---------ATGAA--ATATAGT-------TTTATTCTTTCCAATTTACATGGCG--AAAGA---A-----------------A--AA----CGA--AAA-A-ACAAAagtaaagggtcacatggcaattttta
gi|6 : aaattaaaaggatacatggcaaattcattctgttttaacaaacactgcttcttgagaacggtttaacacggatatagaacagctctgtgacgtttatcaaactcttaactttgctggtagattgtaaaagggacaaatcactcggaaattatttaaaaacattttttTGTC------------TGTGAATGACCTTCCTTTTT-CTTTTGTTGTCTATGTCTATTTATGAAAATAAAAAACATGCTGAACGTGTTTTTTTGTGCTTATAAATAACAATA-TG------ATATAAATAACATGT--CA-TT--TT-TTCTATCTACAC---CTTCT---CAATTTTTGCTTCACTAAAACAATGTACCAAACAAATTGTTAGTCTTCATAAGGGTATGAAAAT---------------------G-TTATACTATTATTGG-AACAAAAATACATGTAAAACT-AGCTA--TTAAGA
gi|6 : attttgatacaagATGGCACGTATCAACTAATCAATTCCTTTCATAA---TTTG------TTTACTCATGTTT--GTGATTTGCCCAAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-ATTTTTC---AGATATattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtatggcacgtatcaactaatcaattcctttcataatttgtttactcatgtttgtgatttgcccaaaatactagtttaacattctaaatgttaataatttttcagatatctgttttctatagatgtaaaggttgagaaacaacc
gi|7 : attttgatacaagtgtctgtgaatgaccttcctttttcttttgttgtctatgtctatttatgaaaataaaaaacatgctgaacgtgtttttttgtgcttataaataacaatatgatataaataacatgtcattttttctatctacaccttctcaatttttgcttcactaaaacaatgtaccaaacaaattgttagtcttcataagggtatgaaaatgttatactattattggaacaaaaatacatgtaaaactagctattaagaattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtCCTTA-A-AAAGAAACTTACCCCATTCTAATTACACTTTATAAAT---AT--------G--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-AC-CTTTAT---TATTGTCTTGCCATATACCGACAG-AAATCAATTAAAATCTGTTGAATACAATA---TTTAAAAAACGAA---ACTATT-TTTCATACCC-TTAAA-AAA--AACATCTAGAAAT--TA---------------------AAATAGGCCTCTTCCCACAA---------A-----------ATGTCATTTGAGATAACGACA-----ACATT-GT-------------T-----T-GTT--TTT--------------T-TG---------CATATATCA----TAT---GAAGGGATAAT-G--T-------AT-------A--------TATAAAATA-A--AA--A---AATAATC---TTT-CTCTCTCCAATTTGCATGGTG--ACAGA---ACTCCCCCCCCCCCCCCCA--CA----C--------A-CAAACCTT---AAATTCT-GAGATTAAAACACTCCTAATAATTT-------TAGTGCTTCCAA---AGATAATTAT--ACATGCAGAATGGAGAGAAAAGAAGA---AA--AA-AA-----C-CTAA----TTC---T---T----TGTTTA----------AAATATTG-T-TA--ACAAT--ATTTATATGT--ATC------AAA-T-ctgttttctatagatgtaaaggttgagaaacaacc
gi|8 : atGTAGCCTTTAAGCAGCT-AA--GATTTGCACTTCAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAAACTCTTTAGTTGTACATGTACCAACATTCTA-CTA---TGTTGACAAAAATTATTATGTGCACTATTGTTACAATGAATTGTCTGAGTATGTATATACATTTGCAGAT--ATATATA--CATATCA-TTAATATAT----------ATTTTGATAAGAGTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTTTATGT---------------AAAAA-ATGGTG----TTAT---TTGTGCTTATAA----CAATA-TACCGTTAATGTAAATAACATGT--CATTT--TG-TTCTACCTACAC---CTTCT---CAATGTTTGCTTCACT-AAACAATACAACAAACAATTTTCAAATCATCATGAGGGTATAAAAATGTGTTTTAA-TTTT--C-T-tgtaaaatgcactac
gi|9 : A---------A-----------A----------------AACA-----ACATT-ATTT------------------------------------------------TTGTTTCATATGTCA----TAT---GTAGACATAAT-G--CTTA----AT-------A--------T---------A--AA--AT--AAT-------TT----------AATTTGCACGGTGTAACAGA---A-----------------T--C-----CTA--GAA-A-AAAAACACTTAATATCCT-GAGATTAAAACGTTTCTTATAA-CTTAAGAAATAATGTT---------------TAT--ATATACAGAATGGAGAGAGAAGA--AGATAA--CA-AA-----G-CTGT----TTATTTT---TAAACTGATAAATGAAA-AGAAAAAAATGAT-T---A-AATCTATTACTATTT---TC------AAA-A-TACATa
Alignments
lowQualScore : 1111111111111111111111111
lowQualScore : 2222 444444 11 1 444444444444 111111 2222 11 22222 222222 111 11 111 1111 6666666666666666666666666 5555555555555555 1111 1 1111 111111 111 111 1 33333333333 4444444444444444444444444 22222 111 0000000000000000000000000 111 44444444444444444444444444 1111 111 111 1 222222 7777777777777777777777777777777777777777777777777777777777777777777777777777 11111111111111111111 1111 666666666666666666666666666666666666666666666666666666666666 44444444444444444444444444444444 1 11 1 1111111 33333333 111 33333333333
lowQualScore : 8888 000000 88 6 88888 0 777777777777 444444 1 0 1111 1 33 3 55 1 4 11111 0 333333 8 444 1 0 3 33 000 4444 6666666666666666666666666 8 5 8888888888888888 99 7777 1 3 1 2222 5 666666 1 77 3 77 5 000 000 5 1 2 0 3 0 55 5 1 8 8 8 1 1 2 44444444444 3 0 3 2222222222222222222222222 55555 6 111 0000000000000000000000000 8 888 0 7 111 66666666666666666666666666 1 4444 111 1 2 0 6 1 1 1 111 1 2 3 1 5 0 5 66 0 5 333333 22 5 5 4444444444444444444444444444444444444444444444444444444444444444444444444444 44 88888888888888888888 3 0000 555 3 444444444444444444444444444444444444444444444444444444444444 3 44 555 77777777777777777777777777777777 3 3 2 5 3 1 0 6 2 222 555 0 44 00 666 55 0 1111111 7777 99999999 3 1 1 0 4 4 444 111 0 0 11111111111 777
lowQualScore : .... ...... .. . ..... . ............ ...... . . .... . .. . .. . . ..... . ...... . ... . . . .. ... .... ......................... . . ................ .. .... . . . .... . ...... . .. . .. . ... ... . . . . . . .. . . . . . . . . ........... . . . ......................... ..... . ... ......................... . ... . . ... .......................... . .... ... . . . . . . . ... . . . . . . . .. . . ...... .. . . ............................................................................ .. .................... . .... ... . ............................................................ . .. ... ................................ . . . . . . . . . ... ... . .. .. ... .. . ....... .... ........ . . . . . . ... ... . . ........... ...
lowQualScore : 3333 777777 33 0 00000 2 888888888888 222222 0 2 2222 2 88 2 88 0 0 22222 6 000000 0 000 2 2 2 88 555 5555 2222222222222222222222222 0 6 8888888888888888 00 0000 0 2 7 1111 7 444444 7 99 6 99 7 000 000 7 3 2 1 2 0 77 7 7 0 0 0 0 0 5 00000000000 8 8 3 3333333333333333333333333 22222 7 777 0000000000000000000000000 0 333 3 8 777 00000000000000000000000000 0 0000 777 0 2 7 7 0 5 0 777 0 5 2 4 0 4 0 99 1 0 111111 44 0 0 9999999999999999999999999999999999999999999999999999999999999999999999999999 22 22222222222222222222 0 0000 000 1 666666666666666666666666666666666666666666666666666666666666 1 22 444 44444444444444444444444444444444 6 6 0 7 6 0 3 8 3 111 888 4 66 00 444 00 9 0000000 7777 55555555 2 0 1 5 0 0 222 000 5 9 33333333333 333
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AAAAAA-----ATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACT-AATAAAATTTTGATACTGGGAAAATACCA-----C------ATATTCTATCA-AAA-CNAAAAAAAGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGA--TATATATATACATATCA-T--ATATA----------TGT------------GTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTAATTTTC-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-A-TTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---GATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTAATTAAT---AT-ACT---AG--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACA---ATNTTTAAAAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--AA----CGA--AAA-A-AAAAACTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTAT----TTA---T---TGAACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATC------AAA-T-TATATCT
Reference ( family-468 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AAAAAA-----ATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACTTAATAAAATTTTGATACTGGGAAAATACCA-----C------ATATTCTATCA-AAA-CNAAAAAAAGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGA--TATATATATACATATCA-T--ATATA----------TAT------------GTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTAATTTTC-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-A-TTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---GATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTAATTAAT---AT-ACT---AG--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACA---ATNTTTAAAAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--AA----CGA--AAA-A-AAAAACTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTAT----TTA---T---TGAACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATC------AAA-T-TATATCT
gi|1 : CCTATCAATTTTCAT----AAAAAA------TAGATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATGTAACTCTAGGGAATAATAACTATGATTTAA--GACT------AA-------ACTGGGAAAATATCAAAATTT------ATATTCTATCA-AAAACAAAAAAAATGTAGAACCATAT----TGTGTCAATTTTATAAATAACTTAAATTCAGTTTACAAAATTGAAAAAAAAATGTA-CCTTTAATTAACTTAAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGTATAAGTTCTGAACCTCTCTAGTTGTAC------AAACCTTCTA-CTA---TATTGACAAAACTTATTATGTGAACTATTGTTATAATGAATTATCTGAGTATGTATATACATCTGTTGA--TATATATATACATATCA-T--ATGTA----------TAT------------ATTTGTGA-TGCCCTTCATTTTTTCTTCTGTTGTTTATGTA--------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATATTA------ATGTAAATAACATAT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCAAT-AAACAATGAAACAAACACATTTCAAATCATCATGAGTTTATGAAAATG--------TTTCC-T-GG-TAATACTAGTATTGG-AAT-AAAATACATATAAAACTAAGCTACTTTTAGA
gi|1 : atgaaaatttccatctcttaaaattgtagtttttgtgataaatctgtagaaaccattaaacgtcttttctatgattgtgaaatatcaaagacattttaggcaaaGGATAGCATGAATCAATTGATCAATTCCTTTCATAA-AATTTGGTCTTTTTTACTTATATTTCCATGACTAGCTTGAAATACTAGTGTAACATT--------------CTA--------AATGTT-----TA-AATTTTT---AAATGTAAAG-------------------------TAACATTAACTGTAACAATTGCTTT-TTGCCCCTTA-CTAAATGAACTTACACCATCCTTAATACACTCAATTAAT---AT-ACT---AG--AAC------------ATGAGAGTATTACTTT-ATCTTTATA-TTTCTTTAT---TGTTGCCTTGCCATATACCAACAG-AAGACAATAATACTATGTTGAATACA---ATTTTTCAAAAAAGAAACCACTATCATTTCATACCCTTTAAA-AGAATAGCATCTGGAAAT--TAAAA-A------CTTTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACACT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTGCATATATCA----CAT---GTAGAGATGAT-G--T-------GT-------A--------T---------A--AA--A---AAT-------CCT-CTCTCTTCAGTCTGCATGGTG--ACTGA---ATG---------------A--AAT---TGA--AAA-AGAAAAACTTCTAAAATTC--GGGATGAAAACATCTGTAATAATTTTTAGAAATATTGCTTCTGA---AGCAAAATAT--ACATGCAGAATGAGGAGAGAATA--A---AA--AA-AA-----C-CTAT----TTAG--T---TGAATTGTTAAATAAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATCTTACTTAAA-T-TATATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggatagcatgaatcaattgatcaattcctttcataaaatttggtcttttttacttatatttccatgactagcttgaaatactagtgtaacattctaaatgtttaaatttttaaatgtaaagtaacattaactgtaacaattgctttttgccccttactaaatgaacttacaccatccttaatacactcaattaatatactagaacatgagagtattactttatctttatatttctttattgttgccttgccatataccaacagaagacaataatactatgttgaatacaatttttcaaaaaagaaaccactatcatttcataccctttaaaagaatagcatctggaaattaaaaacttttcatcaaataggcctcttccaccaaagacaacactgtttggttgtttttttgtttgttgcatatatcacatgtagagatgatgtgtataaaaaatcctctctcttcagtctgcatggtgactgaatgaaattgaaaaagaaaaacttctaaaattcgggatgaaaacatctgtaataatttttagaaatattgcttctgaagcaaaatatacatgcagaatgaggagagaataaaaaaaacctatttagttgaattgttaaataaaaagaaaaaatgttataatccattattacttatcttacttaaattatattt
gi|10 : atgaaaatttccatctcttaaaattgtagtttttgtgataaatctgtagaaaccattaaacgtcttttctatgattgtgaaatatcaaagacattttaggcaaacctatcaattttcataaaaaatagatgtactaatgtaataactaattggtcggtttcagatgtaactctagggaataataactatgatttaagactaaactgggaaaatatcaaaatttatattctatcaaaaacaaaaaaaatgtagaaccatattgtgtcaattttataaataacttaaattcagtttacaaaattgaaaaaaaaatgtacctttaattaacttaaagatttgcactttaacaaaatttggaaacattacataagtataagttctgaacctctctagttgtacaaaccttctactatattgacaaaacttattatgtgaactattgttataatgaattatctgagtatgtatatacatctgttgatatatatatacatatcatatgtatatatttgtgatgcccttcattttttcttctgttgtttatgtaaaaaaatgttgttttcttttgtgcttataacaatattaatgtaaataacatatcatttttttctacctacaccttctcaatttttgcttcaataaacaatgaaacaaacacatttcaaatcatcatgagtttatgaaaatgtttcctggtaatactagtattggaataaaatacatataaaactaagctacttttagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTGCCTTCTTATCC-TTA-A-AAAGAAACTTACCCCATTCTAATTACACTTTATAAAT---AT--------G--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-AC-CTTTAT---TATTGTCTTGCCGTATACCAACAG-AAATCAATTAAAATTTGTTGAATACA---ATATTTAAAAAACATAACTACTTTT-TTTCATACCCTTAAAG-AAAATAACATCTAGAAAT--TAAAATAGGC---CTCTTCAAACAAA-ATGTCTTTT-GAGATA---------A-----------A----------------AACA-----ACATT-GTT-----------GT-----T-GTT--TTT------------------------TTCCATATATCATAATTAT---GTAGAGAAAAT-G--T-------ATATATAAAA--------T---------A--AA--A---AATAATC---TTT-CTCTCTCCAATTTGCA
gi|11 : ---------A-----------A----------------GACA-----GCCTT-GTTT--------G-TT-----TTGTT--TTT--------------T-TG--TTTGTTCCATATATCG----CAT---GTAGTGATAAT-G--T-------AT-------A--------T---------A--AA--AG--AAT-------CTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---G-----------------ATAAA----TAG--GAA-A-AAAAACCCCTAAAATTCT-GAGATAAAAACATCTTAAATACTTTTTAGAAATAGTGCTTCCAG---ACAAAAATAT--ATATGCAGAATGAAGGGAGAAGA--A---AA--AACAACAACCC-CTAT----TTAG--TTA-TAAATTGTTAAATAAAA-TG-AAAAAATG-T-T---ATAATCCATTATTACTT---TA------AAATT-TATATCT
gi|12 : tgttcaggaggT--TTT--------------T-TG--TTTA----ATATATTA----CAT---TTAGAGATACT-G--T-------AT-------A--------T---------A--AA--C---AAT-------CTT-CTCTC--CAGTTTGCATGGTG--ATAGAGATA-----------------A--AA----AGA--AAA-A-AAAA-TTTTTAAAACTCT-GAGATAAAAACATCTCTAGTAATTTTTAGAAATAATGCTTCCGA---AGAAAAATAT--ACATGCAGAACGGAGAGATAAGA--A---GA--GT-AC-----CTCTAT----TTAAC-TA--TGAACTGTT-AACAAGATAG-AAAAAATG-T-TACAATAATCTATTTTTACTTTAAT--------AA-T-TATATCTatgt
gi|13 : tta-----------A----------------GATA-----ACCTT-GTTT--------G-TT-----T-GTT--CTC--------------T-TG--TTTGTTATATATATCA----CAT---GT--------------------------------------------------------------------------CTCTCTCCAATTTGCATGGTG--ACAGA---A-----------------A--GA-----AATTAAA-A-AAAAACTTCTAGAATTCTAGAGATAAAACCAATTTTAATAAAGTTAAGAAATATTGCTTCCAA---AGAAAAATAT--TCATGCAGATTGAAGAGAGAAGA--A---AA--AATAA-----T-TTAA----TTA-------TGAACTATTAAATAAAA-AG-AAAAAA-A-TAT---ATAATCCATTAT---TT--A-A------AAA-T-TATATCTttt
gi|14 : ACTGGGAAAATACCA-----C------ATATTCTATC------CAAAAAAAAAATAGAACAATCT----TGTGTCAATATCAAAAATTACTTAAAATCAGTTGACAAAATTGAAAAATA--T-TAGACTTTAAACAACTGAAA-GATTGACACTTTAACAAAATTTGGAAACATTACAGAAGCATACTTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TTTTGACAtt
gi|15 : T-----T-GTT--TTT--------------T-TG--TTTGTTCTATATACCA----TAT---GTATAGGTAAT-GTTT-------AT-------A--------TAAAACAAAAA--AA--A---AATC------TTT-CACTCTCCAGTTTGCATAATG--ACAAA---A-----------------A--AAACCCC----------AAAAACCT-TAATATTCT-GAGATAAAAACATCACTAATAAGCTT--AAAATAGTGCTTACGA---AGAAAAATAT--ACATG
gi|16 : ctttctAATTTACATGGTG--AAAGA---A-----------------A--AA----CAA--CAACA-AAAAA--TC----ATTCT-GAGATTAAAACATTTCTAATAA-CTTTAGAAATATTATCTGTAG---AGAAAACTAA--ACATGCAGATTCGAGAGAAACTA--A---GA--AA-CA-----C-ATGT----TTATGTT---TGAACTGATTAATGTAA-AG-ATAA-----T-T---ATTA-CCATTACTATT----TC------AAA-CATATATCTaacataaa
gi|17 : AAAACATGTGGAATTCT-GAGATTAAACCATTTCTAGTTACATT-AGAAATAGTGTTTCTAA---AGAAAACTAT--ACATGTAGAATGGAGAGAAAACAAGA---AA--AA-AA-----C-TTGT----TT----T---T-AACTAATAAATGAAA-AG-AATAAATG-A-T---TTAATCTA-CATGAATT--A-C------AAT-T-TA
gi|18 : accttccacttcaatac-TTTCATATCCTT-AAC-AGAATAATACCTTGATAC--TGCAA-A------CTTTTC-ATCTTATAGGCAATTT-TCATCA---------A-------------------------------A-----ATGTT-ACTT--------GAG--------ATT--TTTAAAAAAAACAACACT-TGTTTTTGTTCCATATATCA----TAT---ATAGAGAT---------------------------------T---------A--G-------------------T-TTCTCTCCAGTTTGCATGGTT--AAAGA---A-----------------A--AA----aaaaatac
gi|19 : aTGTGCTTATTA----CAATA-TA------ATGTAAATGATATGTAACACTTATTTATTCTACCTACGC---CTTCTTCTCAAGTTTTGCATCACT-AAACAATGAAACAAACACATTTTAAATCATCATGAGGATATGAAAGTATGTTTTATTTTTCTT-TG-TTACACTAa
gi|2 : aatgagtgaaatgATCAATTTTCATCAGTAATAAATGTTTATAAATGTACTAATGTGATAACTAATTAGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACTTAATAAAATTTTAATACTGGGAAAATAGCA-----C------ATGTTCTATCA-AAA-TCAAAAAAAGGTGGAACCATCT----TGTATCAATTTTATAAATTACTTAAACTCAGTTTACAAAATTGAAAGATA--TAT-------------------------GCACTTTAACAACATTTGGAAACATTTCATAAGCATAATTTCTGAAACTCTCTAGTTATAC------CAACATTCTA-CAA---TATTGACAAAAACTATTATGTTGACTACTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGATTTATATACATA-ATATTAGT--ATATATTTTGATACGTGT------------GTCTGTGA-TGCCTTTCCTTTTTTTTTCTGTTGTCTATGT---------------AAAAT-ATGTTG----TTGT-TTTTGTGCTTATAA----CAATA-TA------ATGAAAATAAATTGT--AATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGATACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTACTTTTC-T-GGTTTATACTAGTATTGGAAAA-AAAATACATATAAAACT-AGTTCCTTTAAGA
gi|2 : GGATAGCAATAATCAACTAGCCAATTACTCTCATAACA-TTTGGTCTTTTTTACTCATAGTTTCATGAC-ATCTTGAAATACAAGTATAATATT--------------CAA--------AATGTT-----TA-AATTTTT---AAATGTAAAA-------------------------TAACATTAACTGTAACAATTGTTTT-TTGCCCCTTACA-AAATAAACTTACACCATCCTTAATACACTCAATTAAT---AT-ACT---AGTCTATAAGAGTATTAAAGCCAAACTGT---CTTTATTTTTAGA-TTTCTTTTT---TGTTGCCTTATCGTATACCAACAG-AAGACAATAATAGTAAGTTGTGTACATTTTTGTTTAAAAAAAGAAACCACTATTGTTTCATACCC-TTAAA-AGAATAGCATCTAGAAAT--TAAAA-AAAAAACCTTACC-ATCAAATAAGCCTCTT-CCACCA---------AATTGTTATTCGA----------------GAAA-----AAGTCAACTT--------T-GT-----T-GTT--TTT--------------T-TG--TTTGTTACATATATCGCT--TGTACAGTAGAGATAAT-G--T-------TT-------A--------T-------------A--A---AAT-------ACT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--GAAAT-TGA--AAA-A-AAAACCTTCTAAAATTCT-AGGATAAAAACATCTGTAAT-ATTTTT-----------TT-------AGAAAAATAT--ACACGCGGAATGAAGAGAGAAGA--A---AA--AA-AC-----A-CTAT----TTA---attaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattggatagcaataatcaactagccaattactctcataacatttggtcttttttactcatagtttcatgacatcttgaaatacaagtataatattcaaaatgtttaaatttttaaatgtaaaataacattaactgtaacaattgttttttgccccttacaaaataaacttacaccatccttaatacactcaattaatatactagtctataagagtattaaagccaaactgtctttatttttagatttcttttttgttgccttatcgtataccaacagaagacaataatagtaagttgtgtacatttttgtttaaaaaaagaaaccactattgtttcatacccttaaaagaatagcatctagaaattaaaaaaaaaaccttaccatcaaataagcctcttccaccaaattgttattcgagaaaaagtcaactttgttgtttttttgtttgttacatatatcgcttgtacagtagagataatgtttataaaatactctctctccagtttgcatggtgacagaaagaaattgaaaaaaaaaccttctaaaattctaggataaaaacatctgtaatatttttttagaaaaatatacacgcggaatgaagagagaagaaaaaaacactatttaag
gi|20 : atcaattttcatcagtaataaatgtttataaatgtactaatgtgataactaattagtcggtttcagatataattctagggaataataactatgatttaatacttaataaaattttaatactgggaaaatagcacatgttctatcaaaatcaaaaaaaggtggaaccatcttgtatcaattttataaattacttaaactcagtttacaaaattgaaagatatatgcactttaacaacatttggaaacatttcataagcataatttctgaaactctctagttataccaacattctacaatattgacaaaaactattatgttgactactgttacaatgaattatctgagtatgtatatacatttgcagatttatatacataatattagtatatattttgatacgtgtgtctgtgatgcctttcctttttttttctgttgtctatgtaaaatatgttgttgtttttgtgcttataacaatataatgaaaataaattgtaatttttttctacctacaccttctcaatttttgcttcactaaacaatgatacaaacaaattttaaatcatcatgagggtatgaaaatgtgttttacttttctggtttatactagtattggaaaaaaaatacatataaaactagttcctttaagaattaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattTGTACTTATAA----CATTA-TA------AATTAAATATTATGT--CATTT--AT-T-CTACCTACACATTCTTCT---CAATTTTTACTACACT-AAACAATCAAAAAAACACATTTAAAATCGTCATGAGGATATGAAAATGTGTTTTAATTTTCTT-TG-TTATACTag
gi|21 : ataTAAATATAATAATACTTAACAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-TCACCA---------A-------------------------------A-----ATATT-ATTTGAGAAAAAG-ATAACCAT-GTTAATTT--------------T-T---TTT-TTTCATATGTC------AT---GTAG
gi|22 : gagaaATAATGTCCTCGATTTAGAGAAATCTTTACATGCAGAATATAGATAAAAGA--A---GA--AACAA-----A-CTATAAAATT----T---TGAACTGATAAATGAAA-AG--AAAAATG-A-T---TTAATCTATTACAACTT--tcttgattttcgtagattgttttaaaata
gi|23 : CTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-ATTTTTC---AGATATtaaaaaa
gi|24 : ttgtgatataTTCATATGCCA----TAT---ATAGAGATAGT-G--T-------AT-------ACATAAGTTT---------A--AA--AAC-AATA------TTT-TTCTCTCTTATTTGCACGGTA--AAAGA---A-----------------cagttttctatagatgtaaaggttgagaaacaacccgaacgtatgttacatta
gi|3 : ttttttaaaGATAGGATAATGTGTTTTAATTTTC-T-GG-T---------ATTGG-AAT-GAAATACATAAAAATCT-AGCTACTTTACGA
gi|3 : ATATGTTCAAGACTACCTTGAAATAATAGTTTAACATTGTAAATATTGATAACTATTAAATGAAATGTTTCAGATATAATTTTCCATAGATGTAAAGGTTAAGAAACAACCTGAAAAATATATAACATTAATTGTAACAACTGACTT-TTGTCCCTTA-A-ATATACACTTACACTATTCTAAATATATTTAATTAAT---ATAACTAAGAG--TAT------------ACCAAATTATTGATTTTATCCTTAGACTTTTTTTAT---TATAGTCTT-TATTATACCGACAATAAGTCAATAATAATTTGTTGAATACA---ATTGTTAAAAAACGAAACCATTA-T-TTTCAAACCATTTAAA-AGAATAGCATTTAGAAATAAAAAAA-A------C-CTTC-ATCAAATAGGCCTTTT-CCACCA---------A-----------AATAGTATTC-------GAGAAAAAGACATC--CTT--------G-TT-----T-GTT--TTT--------------TATG--TTTGTTTCATATATCA----TTT---GTAGAGATAATAG--TTATATACAT-------A--------T---------A--AAATA---AATAATAATCTTT-CTCTCT-CAATATGCACGGTG--ACAAA---C-----------------A--AA----AAT--AGA-A-AACAACCCTTAAAATTCT-AAGATAAAAACAGTATTCATAA-TATTAGAAATAGTGCTTCTGA---AGAAAAGTAT--ACACACAGAATGGAGAGAAAAGA--A---GATGAA-AA-----C-CTGT----TTA---TCTACGAACAGATAAATAAAG-AT-AACAAATG-T-T---TCGATCTATTATTACTT---TC------AAA-A-TATATCTattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaatatgttcaagactaccttgaaataatagtttaacattgtaaatattgataactattaaatgaaatgtttcagatataattttccatagatgtaaaggttaagaaacaacctgaaaaatatataacattaattgtaacaactgacttttgtcccttaaatatacacttacactattctaaatatatttaattaatataactaagagtataccaaattattgattttatccttagactttttttattatagtctttattataccgacaataagtcaataataatttgttgaatacaattgttaaaaaacgaaaccattattttcaaaccatttaaaagaatagcatttagaaataaaaaaaaccttcatcaaataggccttttccaccaaaatagtattcgagaaaaagacatccttgtttgttttttatgtttgtttcatatatcatttgtagagataatagttatatacatataaaataaataataatctttctctctcaatatgcacggtgacaaacaaaaatagaaaacaacccttaaaattctaagataaaaacagtattcataatattagaaatagtgcttctgaagaaaagtatacacacagaatggagagaaaagaagatgaaaacctgtttatctacgaacagataaataaagataacaaatgtttcgatctattattactttcaaaatatatctatttc
gi|4 : gataggataatgtgttttaattttctggtattggaatgaaatacataaaaatctagctactttacgaattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaCCTATCAATTTTCAT----AAAAAA-----ATAATTGTCATAAAGTAATATCTAATTGGTCAGTTTCAGATATAATTCTAGGGAATAATAATTATGGTTTTACTTACTAAATAAAATTTTGATACTGGCAAAATACCA-----CTGTGACATATTCTATCACAAA-CCAAAAAAGGGTAGAACCATCTAAAATGTGTCAATTTTATAAATTACTTAAATTAATTTTACAAAATTGAAAAATA--TGTAGCCTTAAAACAACT-AAAAGGTTTACACTTTAACAAAATTTGGAAACATTACATAAACATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTACCTACTTTATTGACAAAAAATATTATGTGGACTATTGTTTCAATGAATAATCTGAGTATG---NNNNNNNNNNNNN--NNNNNNNNNNNNNNNNN-N--NNNNN----------NNN------------NNNNNNNN-NNNNNNNNNNNTTTGATACGAGTGTCTGTG------------------------ATTG----CCTTCCTTTTTTCTTCT---------TT-CT------ATGTAAAAAAAATG-------T--TG-CTCTACTTACAC---CTTCT---CAATTTTTGCTTCACT-ATACAATGAAACAAACAAATTTTAAATTATCATGAGGCTATGAAAATGTGTTTTAATTTTC-TGGG-TTATACTAGTATTGG-AAT-AAAATACATGTACAATT-AGCTACTTTAAGAatttc
gi|5 : ttttttcagtttttttaaacaattaacaacttttGGCTGGCAAGTAACAGCTAGTCAAATC-TTTCATA-----------TTTTTTTCTCATATTTTCATGACTAGCTTGCA----TAG------ATG--------------TTA--------AAT-TT---GGAA-AACAACC---TGAACTTATG-------------------------TAACATTAATTGTAACAATTGCCGA-TTGTCCCTTA-A-ACATACATTTACACCATATTAAATACACTTAAT--ATTCCAA-AC----AA--TAT------------GTCAACTTGTTATTTTTATCTTTTGA-TATTTTTATGAATATTGTCTCGCCATA----AACTG-AAGTCAGTTTTACTATGTTGAATAAA---AAAATCAAAAA--TAAATCATTAGT-TTTCATACCCTTT-AA-AGTATAACATCTTGATAC--TAAAA-A------CTGTTT-ATCAAATAGTGTTTTT-TTATTATAATTCGAGA-----------A----------------AAAA-----AAA--------------------------ACT--TTT--------------T-T---TTTGTATCACATGTCA----TAT---GTACAGATAAT-G--T-------AT-------A--------T---------ATGAA--ATATAGT-------TTTATTCTTTCCAATTTACATGGCG--AAAGA---A-----------------A--AA----CGA--AAA-A-ACAAAagtaaagggtcacatggcaattttta
gi|6 : aaattaaaaggatacatggcaaattcattctgttttaacaaacactgcttcttgagaacggtttaacacggatatagaacagctctgtgacgtttatcaaactcttaactttgctggtagattgtaaaagggacaaatcactcggaaattatttaaaaacatttttt--ATACA----------AGT------------GTCTGTGAATGACCTTCCTTTTT-CTTTTGTTGTCTATGTCTATTTATGAAAATAAAAAACATGCTGAACGTGTTTTTTTGTGCTTATAAATAACAATA-TG------ATATAAATAACATGT--CA-TT--TT-TTCTATCTACAC---CTTCT---CAATTTTTGCTTCACTAAAACAATGTACCAAACAAATTGTTAGTCTTCATAAGGGTATGAAAAT------------------G-TTATACTATTATTGG-AACAAAAATACATGTAAAACT-AGCTA--TTAAGA
gi|6 : attttgATGGCACGTATCAACTAATCAATTCCTTTCATAA---TTTG------TTTACTCATGTTT--GTGATTTGCCCAAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-ATTTTTC---AGATATattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtatggcacgtatcaactaatcaattcctttcataatttgtttactcatgtttgtgatttgcccaaaatactagtttaacattctaaatgttaataatttttcagatatctgttttctatagatgtaaaggttgagaaacaacc
gi|7 : attttgatacaagtgtctgtgaatgaccttcctttttcttttgttgtctatgtctatttatgaaaataaaaaacatgctgaacgtgtttttttgtgcttataaataacaatatgatataaataacatgtcattttttctatctacaccttctcaatttttgcttcactaaaacaatgtaccaaacaaattgttagtcttcataagggtatgaaaatgttatactattattggaacaaaaatacatgtaaaactagctattaagaattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtCCTTA-A-AAAGAAACTTACCCCATTCTAATTACACTTTATAAAT---AT--------G--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-AC-CTTTAT---TATTGTCTTGCCATATACCGACAG-AAATCAATTAAAATCTGTTGAATACA---ATATTTAAAAAACGAA---ACTATT-TTTCATACCC-TTAAA-AAA--AACATCTAGAAAT--TA---------------------AAATAGGCCTCTTCCCACAA---------A-----------ATGTCATTTGAGATAACGACA-----ACATT-GT-------------T-----T-GTT--TTT--------------T-TG---------CATATATCA----TAT---GAAGGGATAAT-G--T-------AT-------A--------TATAAAATA-A--AA--A---AATAATC---TTT-CTCTCTCCAATTTGCATGGTG--ACAGA---ACTCCCCCCCCCCCCCCCA--CA----C--------A-CAAACCTT---AAATTCT-GAGATTAAAACACTCCTAATAATTT-------TAGTGCTTCCAA---AGATAATTAT--ACATGCAGAATGGAGAGAAAAGAAGA---AA--AA-AA-----C-CTAA----TTC---T---T----TGTTTA----------AAATATTG-T-TA--ACAAT--ATTTATATGT--ATC------AAA-T-ctgttttctatagatgtaaaggttgagaaacaacc
gi|8 : atGTAGCCTTTAAGCAGCT-AA--GATTTGCACTTCAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAAACTCTTTAGTTGTACATGTACCAACATTCTA-CTA---TGTTGACAAAAATTATTATGTGCACTATTGTTACAATGAATTGTCTGAGTATGTATATACATTTGCAGA--TATATATA--CATATCA-TTAATATA----------TATTTTGATAAGAGTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTTTATGT---------------AAAAA-ATGGTG----TTAT---TTGTGCTTATAA----CAATA-TACCGTTAATGTAAATAACATGT--CATTT--TG-TTCTACCTACAC---CTTCT---CAATGTTTGCTTCACT-AAACAATACAACAAACAATTTTCAAATCATCATGAGGGTATAAAAATGTGTTTTAATTTTC-T-tgtaaaatgcactac
gi|9 : A---------A-----------A----------------AACA-----ACATT-ATTT------------------------------------------------TTGTTTCATATGTCA----TAT---GTAGACATAAT-G--CTTA----AT-------A--------T---------A--AA--AT--AAT-------TT----------AATTTGCACGGTGTAACAGA---A-----------------T--C-----CTA--GAA-A-AAAAACACTTAATATCCT-GAGATTAAAACGTTTCTTATAA-CTTAAGAAATAATGTT---------------TAT--ATATACAGAATGGAGAGAGAAGA--AGATAA--CA-AA-----G-CTGT----TTATTTT---TAAACTGATAAATGAAA-AGAAAAAAATGAT-T---A-AATCTATTACTATTT---TC------AAA-A-TACATa
Alignments
lowQualScore : 1111111111111111111111111
lowQualScore : 2222 444444 11 1 22 444444444444 111111 2222 11 22222 222222 111 11 111 222222 666666666666666666666 5555555555555555 1111 1 1111 111111 111 111 1 33333333333 4444444444444444444444444 22222 111 0000000000000000000000000 111 44444444444444444444444444 1111 111 111 1 222222 7777777777777777777777777777777777777777777777777777777777777777777777777777 11111111111111111111 1111 666666666666666666666666666666666666666666666666666666666666 5555555555555555555555555555555 1 11 1 1111111 33333333 111 33333333333
lowQualScore : 8888 000000 88 3 00 3 0 777777777777 444444 1 0 1111 1 33 3 55 1 4 11111 0 333333 8 444 1 0 3 33 000 000000 888888888888888888888 8 5 8888888888888888 99 7777 1 3 1 2222 5 666666 1 77 3 77 5 000 000 5 1 2 0 3 0 55 5 1 8 8 8 1 1 2 44444444444 3 0 3 2222222222222222222222222 55555 6 111 0000000000000000000000000 8 888 0 7 111 66666666666666666666666666 1 4444 111 1 2 0 6 1 1 1 111 1 2 3 1 5 0 5 66 0 5 333333 22 5 5 4444444444444444444444444444444444444444444444444444444444444444444444444444 44 88888888888888888888 3 0000 555 3 444444444444444444444444444444444444444444444444444444444444 3 44 555 1111111111111111111111111111111 3 3 6 3 1 7 1 2 222 555 0 44 00 666 55 0 1111111 7777 99999999 3 1 1 0 4 4 444 111 0 0 11111111111 777
lowQualScore : .... ...... .. . .. . . ............ ...... . . .... . .. . .. . . ..... . ...... . ... . . . .. ... ...... ..................... . . ................ .. .... . . . .... . ...... . .. . .. . ... ... . . . . . . .. . . . . . . . . ........... . . . ......................... ..... . ... ......................... . ... . . ... .......................... . .... ... . . . . . . . ... . . . . . . . .. . . ...... .. . . ............................................................................ .. .................... . .... ... . ............................................................ . .. ... ............................... . . . . . . . . ... ... . .. .. ... .. . ....... .... ........ . . . . . . ... ... . . ........... ...
lowQualScore : 3333 777777 33 3 77 7 2 888888888888 222222 0 2 2222 2 88 2 88 0 0 22222 6 000000 0 000 2 2 2 88 555 555555 222222222222222222222 0 6 8888888888888888 00 0000 0 2 7 1111 7 444444 7 99 6 99 7 000 000 7 3 2 1 2 0 77 7 7 0 0 0 0 0 5 00000000000 8 8 3 3333333333333333333333333 22222 7 777 0000000000000000000000000 0 333 3 8 777 00000000000000000000000000 0 0000 777 0 2 7 7 0 5 0 777 0 5 2 4 0 4 0 99 1 0 111111 44 0 0 9999999999999999999999999999999999999999999999999999999999999999999999999999 22 22222222222222222222 0 0000 000 1 666666666666666666666666666666666666666666666666666666666666 1 22 444 5555555555555555555555555555555 6 6 5 6 0 2 3 3 111 888 4 66 00 444 00 9 0000000 7777 55555555 2 0 1 5 0 0 222 000 5 9 33333333333 333
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AAAAAA-----ATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACT-AA-TAAAATTTTGATACTGGGAAAATACCA-----C------ATATTCTATCA-AAA-CNAAAAAAAGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGA--TATATATATACATATCA-T----ATATA----------T----------GTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTAATTTTC-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-A-TTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---GATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTAATTAAT---AT-ACT---AG--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACA---ATNTTTAAAAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--AA----CGA--AAA-A-AAAAACTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTAT----TTA---T---TGAACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATC------AAA-T-TATATCT
Reference ( family-468 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AAAAAA-----ATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACT-AA-TAAAATTTTGATACTGGGAAAATACCA-----C------ATATTCTATCA-AAA-CNAAAAAAAGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGA--TATATATATACATATCA-T----ATATA----------T----------GTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTAATTTTC-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-A-TTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---GATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTAATTAAT---AT-ACT---AG--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACA---ATNTTTAAAAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--AA----CGA--AAA-A-AAAAACTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTAT----TTA---T---TGAACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATC------AAA-T-TATATCT
gi|1 : CCTATCAATTTTCAT----AAAAAA------TAGATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATGTAACTCTAGGGAATAATAACTATGATTTAA--GACT-AA-------------ACTGGGAAAATATCAAAATTT------ATATTCTATCA-AAAACAAAAAAAATGTAGAACCATAT----TGTGTCAATTTTATAAATAACTTAAATTCAGTTTACAAAATTGAAAAAAAAATGTA-CCTTTAATTAACTTAAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGTATAAGTTCTGAACCTCTCTAGTTGTAC------AAACCTTCTA-CTA---TATTGACAAAACTTATTATGTGAACTATTGTTATAATGAATTATCTGAGTATGTATATACATCTGTTGA--TATATATATACATATCA-T----ATGTA----------T----------ATATTTGTGA-TGCCCTTCATTTTTTCTTCTGTTGTTTATGTA--------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATATTA------ATGTAAATAACATAT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCAAT-AAACAATGAAACAAACACATTTCAAATCATCATGAGTTTATGAAAATG--------TTTCC-T-GG-TAATACTAGTATTGG-AAT-AAAATACATATAAAACTAAGCTACTTTTAGA
gi|1 : atgaaaatttccatctcttaaaattgtagtttttgtgataaatctgtagaaaccattaaacgtcttttctatgattgtgaaatatcaaagacattttaggcaaaGGATAGCATGAATCAATTGATCAATTCCTTTCATAA-AATTTGGTCTTTTTTACTTATATTTCCATGACTAGCTTGAAATACTAGTGTAACATT--------------CTA--------AATGTT-----TA-AATTTTT---AAATGTAAAG-------------------------TAACATTAACTGTAACAATTGCTTT-TTGCCCCTTA-CTAAATGAACTTACACCATCCTTAATACACTCAATTAAT---AT-ACT---AG--AAC------------ATGAGAGTATTACTTT-ATCTTTATA-TTTCTTTAT---TGTTGCCTTGCCATATACCAACAG-AAGACAATAATACTATGTTGAATACA---ATTTTTCAAAAAAGAAACCACTATCATTTCATACCCTTTAAA-AGAATAGCATCTGGAAAT--TAAAA-A------CTTTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACACT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTGCATATATCA----CAT---GTAGAGATGAT-G--T-------GT-------A--------T---------A--AA--A---AAT-------CCT-CTCTCTTCAGTCTGCATGGTG--ACTGA---ATG---------------A--AAT---TGA--AAA-AGAAAAACTTCTAAAATTC--GGGATGAAAACATCTGTAATAATTTTTAGAAATATTGCTTCTGA---AGCAAAATAT--ACATGCAGAATGAGGAGAGAATA--A---AA--AA-AA-----C-CTAT----TTAG--T---TGAATTGTTAAATAAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATCTTACTTAAA-T-TATATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggatagcatgaatcaattgatcaattcctttcataaaatttggtcttttttacttatatttccatgactagcttgaaatactagtgtaacattctaaatgtttaaatttttaaatgtaaagtaacattaactgtaacaattgctttttgccccttactaaatgaacttacaccatccttaatacactcaattaatatactagaacatgagagtattactttatctttatatttctttattgttgccttgccatataccaacagaagacaataatactatgttgaatacaatttttcaaaaaagaaaccactatcatttcataccctttaaaagaatagcatctggaaattaaaaacttttcatcaaataggcctcttccaccaaagacaacactgtttggttgtttttttgtttgttgcatatatcacatgtagagatgatgtgtataaaaaatcctctctcttcagtctgcatggtgactgaatgaaattgaaaaagaaaaacttctaaaattcgggatgaaaacatctgtaataatttttagaaatattgcttctgaagcaaaatatacatgcagaatgaggagagaataaaaaaaacctatttagttgaattgttaaataaaaagaaaaaatgttataatccattattacttatcttacttaaattatattt
gi|10 : atgaaaatttccatctcttaaaattgtagtttttgtgataaatctgtagaaaccattaaacgtcttttctatgattgtgaaatatcaaagacattttaggcaaacctatcaattttcataaaaaatagatgtactaatgtaataactaattggtcggtttcagatgtaactctagggaataataactatgatttaagactaaactgggaaaatatcaaaatttatattctatcaaaaacaaaaaaaatgtagaaccatattgtgtcaattttataaataacttaaattcagtttacaaaattgaaaaaaaaatgtacctttaattaacttaaagatttgcactttaacaaaatttggaaacattacataagtataagttctgaacctctctagttgtacaaaccttctactatattgacaaaacttattatgtgaactattgttataatgaattatctgagtatgtatatacatctgttgatatatatatacatatcatatgtatatatttgtgatgcccttcattttttcttctgttgtttatgtaaaaaaatgttgttttcttttgtgcttataacaatattaatgtaaataacatatcatttttttctacctacaccttctcaatttttgcttcaataaacaatgaaacaaacacatttcaaatcatcatgagtttatgaaaatgtttcctggtaatactagtattggaataaaatacatataaaactaagctacttttagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTGCCTTCTTATCC-TTA-A-AAAGAAACTTACCCCATTCTAATTACACTTTATAAAT---AT--------G--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-AC-CTTTAT---TATTGTCTTGCCGTATACCAACAG-AAATCAATTAAAATTTGTTGAATACA---ATATTTAAAAAACATAACTACTTTT-TTTCATACCCTTAAAG-AAAATAACATCTAGAAAT--TAAAATAGGC---CTCTTCAAACAAA-ATGTCTTTT-GAGATA---------A-----------A----------------AACA-----ACATT-GTT-----------GT-----T-GTT--TTT------------------------TTCCATATATCATAATTAT---GTAGAGAAAAT-G--T-------ATATATAAAA--------T---------A--AA--A---AATAATC---TTT-CTCTCTCCAATTTGCA
gi|11 : ---------A-----------A----------------GACA-----GCCTT-GTTT--------G-TT-----TTGTT--TTT--------------T-TG--TTTGTTCCATATATCG----CAT---GTAGTGATAAT-G--T-------AT-------A--------T---------A--AA--AG--AAT-------CTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---G-----------------ATAAA----TAG--GAA-A-AAAAACCCCTAAAATTCT-GAGATAAAAACATCTTAAATACTTTTTAGAAATAGTGCTTCCAG---ACAAAAATAT--ATATGCAGAATGAAGGGAGAAGA--A---AA--AACAACAACCC-CTAT----TTAG--TTA-TAAATTGTTAAATAAAA-TG-AAAAAATG-T-T---ATAATCCATTATTACTT---TA------AAATT-TATATCT
gi|12 : tgttcaggaggT--TTT--------------T-TG--TTTA----ATATATTA----CAT---TTAGAGATACT-G--T-------AT-------A--------T---------A--AA--C---AAT-------CTT-CTCTC--CAGTTTGCATGGTG--ATAGAGATA-----------------A--AA----AGA--AAA-A-AAAA-TTTTTAAAACTCT-GAGATAAAAACATCTCTAGTAATTTTTAGAAATAATGCTTCCGA---AGAAAAATAT--ACATGCAGAACGGAGAGATAAGA--A---GA--GT-AC-----CTCTAT----TTAAC-TA--TGAACTGTT-AACAAGATAG-AAAAAATG-T-TACAATAATCTATTTTTACTTTAAT--------AA-T-TATATCTatgt
gi|13 : tta-----------A----------------GATA-----ACCTT-GTTT--------G-TT-----T-GTT--CTC--------------T-TG--TTTGTTATATATATCA----CAT---GT--------------------------------------------------------------------------CTCTCTCCAATTTGCATGGTG--ACAGA---A-----------------A--GA-----AATTAAA-A-AAAAACTTCTAGAATTCTAGAGATAAAACCAATTTTAATAAAGTTAAGAAATATTGCTTCCAA---AGAAAAATAT--TCATGCAGATTGAAGAGAGAAGA--A---AA--AATAA-----T-TTAA----TTA-------TGAACTATTAAATAAAA-AG-AAAAAA-A-TAT---ATAATCCATTAT---TT--A-A------AAA-T-TATATCTttt
gi|14 : ACTGGGAAAATACCA-----C------ATATTCTATC------CAAAAAAAAAATAGAACAATCT----TGTGTCAATATCAAAAATTACTTAAAATCAGTTGACAAAATTGAAAAATA--T-TAGACTTTAAACAACTGAAA-GATTGACACTTTAACAAAATTTGGAAACATTACAGAAGCATACTTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TTTTGACAtt
gi|15 : T-----T-GTT--TTT--------------T-TG--TTTGTTCTATATACCA----TAT---GTATAGGTAAT-GTTT-------AT-------A--------TAAAACAAAAA--AA--A---AATC------TTT-CACTCTCCAGTTTGCATAATG--ACAAA---A-----------------A--AAACCCC----------AAAAACCT-TAATATTCT-GAGATAAAAACATCACTAATAAGCTT--AAAATAGTGCTTACGA---AGAAAAATAT--ACATG
gi|16 : ctttctAATTTACATGGTG--AAAGA---A-----------------A--AA----CAA--CAACA-AAAAA--TC----ATTCT-GAGATTAAAACATTTCTAATAACTTT-AGAAATATTATCTGTAG---AGAAAACTAA--ACATGCAGATTCGAGAGAAACTA--A---GA--AA-CA-----C-ATGT----TTATGTT---TGAACTGATTAATGTAA-AG-ATAA-----T-T---ATTA-CCATTACTATT----TC------AAA-CATATATCTaacataaa
gi|17 : AAAACATGTGGAATTCT-GAGATTAAACCATTTCTAGTTACATT-AGAAATAGTGTTTCTAA---AGAAAACTAT--ACATGTAGAATGGAGAGAAAACAAGA---AA--AA-AA-----C-TTGT----TT----T---T-AACTAATAAATGAAA-AG-AATAAATG-A-T---TTAATCTA-CATGAATT--A-C------AAT-T-TA
gi|18 : accttccacttcaatac-TTTCATATCCTT-AAC-AGAATAATACCTTGATAC--TGCAA-A------CTTTTC-ATCTTATAGGCAATTT-TCATCA---------A-------------------------------A-----ATGTT-ACTT--------GAG--------ATT--TTTAAAAAAAACAACACT-TGTTTTTGTTCCATATATCA----TAT---ATAGAGAT---------------------------------T---------A--G-------------------T-TTCTCTCCAGTTTGCATGGTT--AAAGA---A-----------------A--AA----aaaaatac
gi|19 : aTGTGCTTATTA----CAATA-TA------ATGTAAATGATATGTAACACTTATTTATTCTACCTACGC---CTTCTTCTCAAGTTTTGCATCACT-AAACAATGAAACAAACACATTTTAAATCATCATGAGGATATGAAAGTATGTTTTATTTTTCTT-TG-TTACACTAa
gi|2 : aatgagtgaaatgATCAATTTTCATCAGTAATAAATGTTTATAAATGTACTAATGTGATAACTAATTAGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACTTAA-TAAAATTTTAATACTGGGAAAATAGCA-----C------ATGTTCTATCA-AAA-TCAAAAAAAGGTGGAACCATCT----TGTATCAATTTTATAAATTACTTAAACTCAGTTTACAAAATTGAAAGATA--TAT-------------------------GCACTTTAACAACATTTGGAAACATTTCATAAGCATAATTTCTGAAACTCTCTAGTTATAC------CAACATTCTA-CAA---TATTGACAAAAACTATTATGTTGACTACTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGATTTATATACATA-ATATTAGT----ATATATTTTGATACGT----------GTGTCTGTGA-TGCCTTTCCTTTTTTTTTCTGTTGTCTATGT---------------AAAAT-ATGTTG----TTGT-TTTTGTGCTTATAA----CAATA-TA------ATGAAAATAAATTGT--AATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGATACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTACTTTTC-T-GGTTTATACTAGTATTGGAAAA-AAAATACATATAAAACT-AGTTCCTTTAAGA
gi|2 : GGATAGCAATAATCAACTAGCCAATTACTCTCATAACA-TTTGGTCTTTTTTACTCATAGTTTCATGAC-ATCTTGAAATACAAGTATAATATT--------------CAA--------AATGTT-----TA-AATTTTT---AAATGTAAAA-------------------------TAACATTAACTGTAACAATTGTTTT-TTGCCCCTTACA-AAATAAACTTACACCATCCTTAATACACTCAATTAAT---AT-ACT---AGTCTATAAGAGTATTAAAGCCAAACTGT---CTTTATTTTTAGA-TTTCTTTTT---TGTTGCCTTATCGTATACCAACAG-AAGACAATAATAGTAAGTTGTGTACATTTTTGTTTAAAAAAAGAAACCACTATTGTTTCATACCC-TTAAA-AGAATAGCATCTAGAAAT--TAAAA-AAAAAACCTTACC-ATCAAATAAGCCTCTT-CCACCA---------AATTGTTATTCGA----------------GAAA-----AAGTCAACTT--------T-GT-----T-GTT--TTT--------------T-TG--TTTGTTACATATATCGCT--TGTACAGTAGAGATAAT-G--T-------TT-------A--------T-------------A--A---AAT-------ACT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--GAAAT-TGA--AAA-A-AAAACCTTCTAAAATTCT-AGGATAAAAACATCTGTAAT-ATTTTT-----------TT-------AGAAAAATAT--ACACGCGGAATGAAGAGAGAAGA--A---AA--AA-AC-----A-CTAT----TTA---attaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattggatagcaataatcaactagccaattactctcataacatttggtcttttttactcatagtttcatgacatcttgaaatacaagtataatattcaaaatgtttaaatttttaaatgtaaaataacattaactgtaacaattgttttttgccccttacaaaataaacttacaccatccttaatacactcaattaatatactagtctataagagtattaaagccaaactgtctttatttttagatttcttttttgttgccttatcgtataccaacagaagacaataatagtaagttgtgtacatttttgtttaaaaaaagaaaccactattgtttcatacccttaaaagaatagcatctagaaattaaaaaaaaaaccttaccatcaaataagcctcttccaccaaattgttattcgagaaaaagtcaactttgttgtttttttgtttgttacatatatcgcttgtacagtagagataatgtttataaaatactctctctccagtttgcatggtgacagaaagaaattgaaaaaaaaaccttctaaaattctaggataaaaacatctgtaatatttttttagaaaaatatacacgcggaatgaagagagaagaaaaaaacactatttaag
gi|20 : atcaattttcatcagtaataaatgtttataaatgtactaatgtgataactaattagtcggtttcagatataattctagggaataataactatgatttaatacttaataaaattttaatactgggaaaatagcacatgttctatcaaaatcaaaaaaaggtggaaccatcttgtatcaattttataaattacttaaactcagtttacaaaattgaaagatatatgcactttaacaacatttggaaacatttcataagcataatttctgaaactctctagttataccaacattctacaatattgacaaaaactattatgttgactactgttacaatgaattatctgagtatgtatatacatttgcagatttatatacataatattagtatatattttgatacgtgtgtctgtgatgcctttcctttttttttctgttgtctatgtaaaatatgttgttgtttttgtgcttataacaatataatgaaaataaattgtaatttttttctacctacaccttctcaatttttgcttcactaaacaatgatacaaacaaattttaaatcatcatgagggtatgaaaatgtgttttacttttctggtttatactagtattggaaaaaaaatacatataaaactagttcctttaagaattaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattTGTACTTATAA----CATTA-TA------AATTAAATATTATGT--CATTT--AT-T-CTACCTACACATTCTTCT---CAATTTTTACTACACT-AAACAATCAAAAAAACACATTTAAAATCGTCATGAGGATATGAAAATGTGTTTTAATTTTCTT-TG-TTATACTag
gi|21 : ataTAAATATAATAATACTTAACAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-TCACCA---------A-------------------------------A-----ATATT-ATTTGAGAAAAAG-ATAACCAT-GTTAATTT--------------T-T---TTT-TTTCATATGTC------AT---GTAG
gi|22 : gagaaATAATGTCCTCGATTTAGAGAAATCTTTACATGCAGAATATAGATAAAAGA--A---GA--AACAA-----A-CTATAAAATT----T---TGAACTGATAAATGAAA-AG--AAAAATG-A-T---TTAATCTATTACAACTT--tcttgattttcgtagattgttttaaaata
gi|23 : CTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-ATTTTTC---AGATATtaaaaaa
gi|24 : ttgtgatataTTCATATGCCA----TAT---ATAGAGATAGT-G--T-------AT-------ACATAAGTTT---------A--AA--AAC-AATA------TTT-TTCTCTCTTATTTGCACGGTA--AAAGA---A-----------------cagttttctatagatgtaaaggttgagaaacaacccgaacgtatgttacatta
gi|3 : ttttttaaaGATAGGATAATGTGTTTTAATTTTC-T-GG-T---------ATTGG-AAT-GAAATACATAAAAATCT-AGCTACTTTACGA
gi|3 : ATATGTTCAAGACTACCTTGAAATAATAGTTTAACATTGTAAATATTGATAACTATTAAATGAAATGTTTCAGATATAATTTTCCATAGATGTAAAGGTTAAGAAACAACCTGAAAAATATATAACATTAATTGTAACAACTGACTT-TTGTCCCTTA-A-ATATACACTTACACTATTCTAAATATATTTAATTAAT---ATAACTAAGAG--TAT------------ACCAAATTATTGATTTTATCCTTAGACTTTTTTTAT---TATAGTCTT-TATTATACCGACAATAAGTCAATAATAATTTGTTGAATACA---ATTGTTAAAAAACGAAACCATTA-T-TTTCAAACCATTTAAA-AGAATAGCATTTAGAAATAAAAAAA-A------C-CTTC-ATCAAATAGGCCTTTT-CCACCA---------A-----------AATAGTATTC-------GAGAAAAAGACATC--CTT--------G-TT-----T-GTT--TTT--------------TATG--TTTGTTTCATATATCA----TTT---GTAGAGATAATAG--TTATATACAT-------A--------T---------A--AAATA---AATAATAATCTTT-CTCTCT-CAATATGCACGGTG--ACAAA---C-----------------A--AA----AAT--AGA-A-AACAACCCTTAAAATTCT-AAGATAAAAACAGTATTCATAA-TATTAGAAATAGTGCTTCTGA---AGAAAAGTAT--ACACACAGAATGGAGAGAAAAGA--A---GATGAA-AA-----C-CTGT----TTA---TCTACGAACAGATAAATAAAG-AT-AACAAATG-T-T---TCGATCTATTATTACTT---TC------AAA-A-TATATCTattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaatatgttcaagactaccttgaaataatagtttaacattgtaaatattgataactattaaatgaaatgtttcagatataattttccatagatgtaaaggttaagaaacaacctgaaaaatatataacattaattgtaacaactgacttttgtcccttaaatatacacttacactattctaaatatatttaattaatataactaagagtataccaaattattgattttatccttagactttttttattatagtctttattataccgacaataagtcaataataatttgttgaatacaattgttaaaaaacgaaaccattattttcaaaccatttaaaagaatagcatttagaaataaaaaaaaccttcatcaaataggccttttccaccaaaatagtattcgagaaaaagacatccttgtttgttttttatgtttgtttcatatatcatttgtagagataatagttatatacatataaaataaataataatctttctctctcaatatgcacggtgacaaacaaaaatagaaaacaacccttaaaattctaagataaaaacagtattcataatattagaaatagtgcttctgaagaaaagtatacacacagaatggagagaaaagaagatgaaaacctgtttatctacgaacagataaataaagataacaaatgtttcgatctattattactttcaaaatatatctatttc
gi|4 : gataggataatgtgttttaattttctggtattggaatgaaatacataaaaatctagctactttacgaattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaCCTATCAATTTTCAT----AAAAAA-----ATAATTGTCATAAAGTAATATCTAATTGGTCAGTTTCAGATATAATTCTAGGGAATAATAATTATGGTTTTACTTACT-AAATAAAATTTTGATACTGGCAAAATACCA-----CTGTGACATATTCTATCACAAA-CCAAAAAAGGGTAGAACCATCTAAAATGTGTCAATTTTATAAATTACTTAAATTAATTTTACAAAATTGAAAAATA--TGTAGCCTTAAAACAACT-AAAAGGTTTACACTTTAACAAAATTTGGAAACATTACATAAACATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTACCTACTTTATTGACAAAAAATATTATGTGGACTATTGTTTCAATGAATAATCTGAGTATG---NNNNNNNNNNNNN--NNNNNNNNNNNNNNNNN-N----NNNNN----------N----------NNNNNNNNNN-NNNNNNNNNNNTTTGATACGAGTGTCTGTG------------------------ATTG----CCTTCCTTTTTTCTTCT---------TT-CT------ATGTAAAAAAAATG-------T--TG-CTCTACTTACAC---CTTCT---CAATTTTTGCTTCACT-ATACAATGAAACAAACAAATTTTAAATTATCATGAGGCTATGAAAATGTGTTTTAATTTTC-TGGG-TTATACTAGTATTGG-AAT-AAAATACATGTACAATT-AGCTACTTTAAGAatttc
gi|5 : ttttttcagtttttttaaacaattaacaacttttGGCTGGCAAGTAACAGCTAGTCAAATC-TTTCATA-----------TTTTTTTCTCATATTTTCATGACTAGCTTGCA----TAG------ATG--------------TTA--------AAT-TT---GGAA-AACAACC---TGAACTTATG-------------------------TAACATTAATTGTAACAATTGCCGA-TTGTCCCTTA-A-ACATACATTTACACCATATTAAATACACTTAAT--ATTCCAA-AC----AA--TAT------------GTCAACTTGTTATTTTTATCTTTTGA-TATTTTTATGAATATTGTCTCGCCATA----AACTG-AAGTCAGTTTTACTATGTTGAATAAA---AAAATCAAAAA--TAAATCATTAGT-TTTCATACCCTTT-AA-AGTATAACATCTTGATAC--TAAAA-A------CTGTTT-ATCAAATAGTGTTTTT-TTATTATAATTCGAGA-----------A----------------AAAA-----AAA--------------------------ACT--TTT--------------T-T---TTTGTATCACATGTCA----TAT---GTACAGATAAT-G--T-------AT-------A--------T---------ATGAA--ATATAGT-------TTTATTCTTTCCAATTTACATGGCG--AAAGA---A-----------------A--AA----CGA--AAA-A-ACAAAagtaaagggtcacatggcaattttta
gi|6 : aaattaaaaggatacatggcaaattcattctgttttaacaaacactgcttcttgagaacggtttaacacggatatagaacagctctgtgacgtttatcaaactcttaactttgctggtagattgtaaaagggacaaatcactcggaaattatttaaaaacatttttt----ATACA----------A----------GTGTCTGTGAATGACCTTCCTTTTT-CTTTTGTTGTCTATGTCTATTTATGAAAATAAAAAACATGCTGAACGTGTTTTTTTGTGCTTATAAATAACAATA-TG------ATATAAATAACATGT--CA-TT--TT-TTCTATCTACAC---CTTCT---CAATTTTTGCTTCACTAAAACAATGTACCAAACAAATTGTTAGTCTTCATAAGGGTATGAAAAT------------------G-TTATACTATTATTGG-AACAAAAATACATGTAAAACT-AGCTA--TTAAGA
gi|6 : attttgATGGCACGTATCAACTAATCAATTCCTTTCATAA---TTTG------TTTACTCATGTTT--GTGATTTGCCCAAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-ATTTTTC---AGATATattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtatggcacgtatcaactaatcaattcctttcataatttgtttactcatgtttgtgatttgcccaaaatactagtttaacattctaaatgttaataatttttcagatatctgttttctatagatgtaaaggttgagaaacaacc
gi|7 : attttgatacaagtgtctgtgaatgaccttcctttttcttttgttgtctatgtctatttatgaaaataaaaaacatgctgaacgtgtttttttgtgcttataaataacaatatgatataaataacatgtcattttttctatctacaccttctcaatttttgcttcactaaaacaatgtaccaaacaaattgttagtcttcataagggtatgaaaatgttatactattattggaacaaaaatacatgtaaaactagctattaagaattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtCCTTA-A-AAAGAAACTTACCCCATTCTAATTACACTTTATAAAT---AT--------G--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-AC-CTTTAT---TATTGTCTTGCCATATACCGACAG-AAATCAATTAAAATCTGTTGAATACA---ATATTTAAAAAACGAA---ACTATT-TTTCATACCC-TTAAA-AAA--AACATCTAGAAAT--TA---------------------AAATAGGCCTCTTCCCACAA---------A-----------ATGTCATTTGAGATAACGACA-----ACATT-GT-------------T-----T-GTT--TTT--------------T-TG---------CATATATCA----TAT---GAAGGGATAAT-G--T-------AT-------A--------TATAAAATA-A--AA--A---AATAATC---TTT-CTCTCTCCAATTTGCATGGTG--ACAGA---ACTCCCCCCCCCCCCCCCA--CA----C--------A-CAAACCTT---AAATTCT-GAGATTAAAACACTCCTAATAATTT-------TAGTGCTTCCAA---AGATAATTAT--ACATGCAGAATGGAGAGAAAAGAAGA---AA--AA-AA-----C-CTAA----TTC---T---T----TGTTTA----------AAATATTG-T-TA--ACAAT--ATTTATATGT--ATC------AAA-T-ctgttttctatagatgtaaaggttgagaaacaacc
gi|8 : atGTAGCCTTTAAGCAGCT-AA--GATTTGCACTTCAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAAACTCTTTAGTTGTACATGTACCAACATTCTA-CTA---TGTTGACAAAAATTATTATGTGCACTATTGTTACAATGAATTGTCTGAGTATGTATATACATTTGCAGA--TATATATA--CATATCA-TTAATATATA----------TTTTGATAAGAGTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTTTATGT---------------AAAAA-ATGGTG----TTAT---TTGTGCTTATAA----CAATA-TACCGTTAATGTAAATAACATGT--CATTT--TG-TTCTACCTACAC---CTTCT---CAATGTTTGCTTCACT-AAACAATACAACAAACAATTTTCAAATCATCATGAGGGTATAAAAATGTGTTTTAATTTTC-T-tgtaaaatgcactac
gi|9 : A---------A-----------A----------------AACA-----ACATT-ATTT------------------------------------------------TTGTTTCATATGTCA----TAT---GTAGACATAAT-G--CTTA----AT-------A--------T---------A--AA--AT--AAT-------TT----------AATTTGCACGGTGTAACAGA---ATCCT-------------A---------GA--AAA-A-AAACACT--TAATATCCT-GAGATTAAAACGTTTCTTATAA-CTTAAGAAATAATGTT---------------TAT--ATATACAGAATGGAGAGAGAAGA--AGATAA--CA-AA-----G-CTGT----TTATTTT---TAAACTGATAAATGAAA-AGAAAAAAATGAT-T---A-AATCTATTACTATTT---TC------AAA-A-TACATa
Alignments
lowQualScore : 1111111111111111111111111
lowQualScore : 2222 444444 11 1 22 444444444444 111111 2222 11 22222 222222 111 11 111 222222 666666666666666666666 5555555555555555 1111 1 1111 111111 111 111 1 33333333333 4444444444444444444444444 22222 111 0000000000000000000000000 111 44444444444444444444444444 1111 111 111 1 222222 7777777777777777777777777777777777777777777777777777777777777777777777777777 11111111111111111111 1111 666666666666666666666666666666666666666666666666666666666666 5555555555555555555555555555555 1 11 1 1111111 33333333 111 33333333333
lowQualScore : 8888 000000 88 3 00 3 0 777777777777 444444 1 0 1111 1 33 3 55 1 4 11111 0 333333 8 444 1 0 3 33 000 000000 888888888888888888888 8 5 8888888888888888 99 7777 1 3 1 2222 5 666666 1 77 3 77 5 000 000 5 1 2 0 3 0 55 5 1 8 8 8 1 1 2 44444444444 3 0 3 2222222222222222222222222 55555 6 111 0000000000000000000000000 8 888 0 7 111 66666666666666666666666666 1 4444 111 1 2 0 6 1 1 1 111 1 2 3 1 5 0 5 66 0 5 333333 22 5 5 4444444444444444444444444444444444444444444444444444444444444444444444444444 44 88888888888888888888 3 0000 555 3 444444444444444444444444444444444444444444444444444444444444 3 44 555 1111111111111111111111111111111 3 3 6 3 1 7 1 2 222 555 0 44 00 666 55 0 1111111 7777 99999999 3 1 1 0 4 4 444 111 0 0 11111111111 777
lowQualScore : .... ...... .. . .. . . ............ ...... . . .... . .. . .. . . ..... . ...... . ... . . . .. ... ...... ..................... . . ................ .. .... . . . .... . ...... . .. . .. . ... ... . . . . . . .. . . . . . . . . ........... . . . ......................... ..... . ... ......................... . ... . . ... .......................... . .... ... . . . . . . . ... . . . . . . . .. . . ...... .. . . ............................................................................ .. .................... . .... ... . ............................................................ . .. ... ............................... . . . . . . . . ... ... . .. .. ... .. . ....... .... ........ . . . . . . ... ... . . ........... ...
lowQualScore : 3333 777777 33 3 77 7 2 888888888888 222222 0 2 2222 2 88 2 88 0 0 22222 6 000000 0 000 2 2 2 88 555 555555 222222222222222222222 0 6 8888888888888888 00 0000 0 2 7 1111 7 444444 7 99 6 99 7 000 000 7 3 2 1 2 0 77 7 7 0 0 0 0 0 5 00000000000 8 8 3 3333333333333333333333333 22222 7 777 0000000000000000000000000 0 333 3 8 777 00000000000000000000000000 0 0000 777 0 2 7 7 0 5 0 777 0 5 2 4 0 4 0 99 1 0 111111 44 0 0 9999999999999999999999999999999999999999999999999999999999999999999999999999 22 22222222222222222222 0 0000 000 1 666666666666666666666666666666666666666666666666666666666666 1 22 444 5555555555555555555555555555555 6 6 5 6 0 2 3 3 111 888 4 66 00 444 00 9 0000000 7777 55555555 2 0 1 5 0 0 222 000 5 9 33333333333 333
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AAAAAA-----ATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACT-AA-TAAAATTTTGATACTGGGAAAATACCA-----C------ATATTCTATCA-AAA-CNAAAAAAAGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGA--TATATATATACATATCA-T----ATATA----------T----------GTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTAATTTTC-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-A-TTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---GATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTAATTAAT---AT-ACT---AG--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACA---ATNTTTAAAAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--AA----CGA--AAA-A-AAAAACTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTAT----TTA---T---TGAACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATC------AAA-T-TATATCT
Reference ( family-468 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AAAAAA-----ATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACT-AA-TAAAATTTTGATACTGGGAAAATACCA-----C------ATATTCTATCA-AAA-CNAAAAAAAGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGA--TATATATATACATATCA-T----ATATA----------T----------GTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTAATTTTC-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-A-TTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---GATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTAATTAAT---AT-ACT---AG--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACA---ATNTTTAAAAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--AA----CGA--AAA-A-AAAAACTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTAT----TTA---T---TGAACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATC------AAA-T-TATATCT
gi|1 : CCTATCAATTTTCAT----AAAAAA------TAGATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATGTAACTCTAGGGAATAATAACTATGATTTAA--GACT-AA-------------ACTGGGAAAATATCAAAATTT------ATATTCTATCA-AAAACAAAAAAAATGTAGAACCATAT----TGTGTCAATTTTATAAATAACTTAAATTCAGTTTACAAAATTGAAAAAAAAATGTA-CCTTTAATTAACTTAAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGTATAAGTTCTGAACCTCTCTAGTTGTAC------AAACCTTCTA-CTA---TATTGACAAAACTTATTATGTGAACTATTGTTATAATGAATTATCTGAGTATGTATATACATCTGTTGA--TATATATATACATATCA-T----ATGTA----------T----------ATATTTGTGA-TGCCCTTCATTTTTTCTTCTGTTGTTTATGTA--------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATATTA------ATGTAAATAACATAT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCAAT-AAACAATGAAACAAACACATTTCAAATCATCATGAGTTTATGAAAATG--------TTTCC-T-GG-TAATACTAGTATTGG-AAT-AAAATACATATAAAACTAAGCTACTTTTAGA
gi|1 : atgaaaatttccatctcttaaaattgtagtttttgtgataaatctgtagaaaccattaaacgtcttttctatgattgtgaaatatcaaagacattttaggcaaaGGATAGCATGAATCAATTGATCAATTCCTTTCATAA-AATTTGGTCTTTTTTACTTATATTTCCATGACTAGCTTGAAATACTAGTGTAACATT--------------CTA--------AATGTT-----TA-AATTTTT---AAATGTAAAG-------------------------TAACATTAACTGTAACAATTGCTTT-TTGCCCCTTA-CTAAATGAACTTACACCATCCTTAATACACTCAATTAAT---AT-ACT---AG--AAC------------ATGAGAGTATTACTTT-ATCTTTATA-TTTCTTTAT---TGTTGCCTTGCCATATACCAACAG-AAGACAATAATACTATGTTGAATACA---ATTTTTCAAAAAAGAAACCACTATCATTTCATACCCTTTAAA-AGAATAGCATCTGGAAAT--TAAAA-A------CTTTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACACT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTGCATATATCA----CAT---GTAGAGATGAT-G--T-------GT-------A--------T---------A--AA--A---AAT-------CCT-CTCTCTTCAGTCTGCATGGTG--ACTGA---ATG---------------A--AAT---TGA--AAA-AGAAAAACTTCTAAAATTC--GGGATGAAAACATCTGTAATAATTTTTAGAAATATTGCTTCTGA---AGCAAAATAT--ACATGCAGAATGAGGAGAGAATA--A---AA--AA-AA-----C-CTAT----TTAG--T---TGAATTGTTAAATAAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATCTTACTTAAA-T-TATATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggatagcatgaatcaattgatcaattcctttcataaaatttggtcttttttacttatatttccatgactagcttgaaatactagtgtaacattctaaatgtttaaatttttaaatgtaaagtaacattaactgtaacaattgctttttgccccttactaaatgaacttacaccatccttaatacactcaattaatatactagaacatgagagtattactttatctttatatttctttattgttgccttgccatataccaacagaagacaataatactatgttgaatacaatttttcaaaaaagaaaccactatcatttcataccctttaaaagaatagcatctggaaattaaaaacttttcatcaaataggcctcttccaccaaagacaacactgtttggttgtttttttgtttgttgcatatatcacatgtagagatgatgtgtataaaaaatcctctctcttcagtctgcatggtgactgaatgaaattgaaaaagaaaaacttctaaaattcgggatgaaaacatctgtaataatttttagaaatattgcttctgaagcaaaatatacatgcagaatgaggagagaataaaaaaaacctatttagttgaattgttaaataaaaagaaaaaatgttataatccattattacttatcttacttaaattatattt
gi|10 : atgaaaatttccatctcttaaaattgtagtttttgtgataaatctgtagaaaccattaaacgtcttttctatgattgtgaaatatcaaagacattttaggcaaacctatcaattttcataaaaaatagatgtactaatgtaataactaattggtcggtttcagatgtaactctagggaataataactatgatttaagactaaactgggaaaatatcaaaatttatattctatcaaaaacaaaaaaaatgtagaaccatattgtgtcaattttataaataacttaaattcagtttacaaaattgaaaaaaaaatgtacctttaattaacttaaagatttgcactttaacaaaatttggaaacattacataagtataagttctgaacctctctagttgtacaaaccttctactatattgacaaaacttattatgtgaactattgttataatgaattatctgagtatgtatatacatctgttgatatatatatacatatcatatgtatatatttgtgatgcccttcattttttcttctgttgtttatgtaaaaaaatgttgttttcttttgtgcttataacaatattaatgtaaataacatatcatttttttctacctacaccttctcaatttttgcttcaataaacaatgaaacaaacacatttcaaatcatcatgagtttatgaaaatgtttcctggtaatactagtattggaataaaatacatataaaactaagctacttttagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTGCCTTCTTATCC-TTA-A-AAAGAAACTTACCCCATTCTAATTACACTTTATAAAT---AT--------G--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-AC-CTTTAT---TATTGTCTTGCCGTATACCAACAG-AAATCAATTAAAATTTGTTGAATACA---ATATTTAAAAAACATAACTACTTTT-TTTCATACCCTTAAAG-AAAATAACATCTAGAAAT--TAAAATAGGC---CTCTTCAAACAAA-ATGTCTTTT-GAGATA---------A-----------A----------------AACA-----ACATT-GTT-----------GT-----T-GTT--TTT------------------------TTCCATATATCATAATTAT---GTAGAGAAAAT-G--T-------ATATATAAAA--------T---------A--AA--A---AATAATC---TTT-CTCTCTCCAATTTGCA
gi|11 : ---------A-----------A----------------GACA-----GCCTT-GTTT--------G-TT-----TTGTT--TTT--------------T-TG--TTTGTTCCATATATCG----CAT---GTAGTGATAAT-G--T-------AT-------A--------T---------A--AA--AG--AAT-------CTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---G-----------------ATAAA----TAG--GAA-A-AAAAACCCCTAAAATTCT-GAGATAAAAACATCTTAAATACTTTTTAGAAATAGTGCTTCCAG---ACAAAAATAT--ATATGCAGAATGAAGGGAGAAGA--A---AA--AACAACAACCC-CTAT----TTAG--TTA-TAAATTGTTAAATAAAA-TG-AAAAAATG-T-T---ATAATCCATTATTACTT---TA------AAATT-TATATCT
gi|12 : tgttcaggaggT--TTT--------------T-TG--TTTA----ATATATTA----CAT---TTAGAGATACT-G--T-------AT-------A--------T---------A--AA--C---AAT-------CTT-CTCTC--CAGTTTGCATGGTG--ATAGAGATA-----------------A--AA----AGA--AAA-A-AAAA-TTTTTAAAACTCT-GAGATAAAAACATCTCTAGTAATTTTTAGAAATAATGCTTCCGA---AGAAAAATAT--ACATGCAGAACGGAGAGATAAGA--A---GA--GT-AC-----CTCTAT----TTAAC-TA--TGAACTGTT-AACAAGATAG-AAAAAATG-T-TACAATAATCTATTTTTACTTTAAT--------AA-T-TATATCTatgt
gi|13 : tta-----------A----------------GATA-----ACCTT-GTTT--------G-TT-----T-GTT--CTC--------------T-TG--TTTGTTATATATATCA----CAT---GT--------------------------------------------------------------------------CTCTCTCCAATTTGCATGGTG--ACAGA---A-----------------A--GA-----AATTAAA-A-AAAAACTTCTAGAATTCTAGAGATAAAACCAATTTTAATAAAGTTAAGAAATATTGCTTCCAA---AGAAAAATAT--TCATGCAGATTGAAGAGAGAAGA--A---AA--AATAA-----T-TTAA----TTA-------TGAACTATTAAATAAAA-AG-AAAAAA-A-TAT---ATAATCCATTAT---TT--A-A------AAA-T-TATATCTttt
gi|14 : ACTGGGAAAATACCA-----C------ATATTCTATC------CAAAAAAAAAATAGAACAATCT----TGTGTCAATATCAAAAATTACTTAAAATCAGTTGACAAAATTGAAAAATA--T-TAGACTTTAAACAACTGAAA-GATTGACACTTTAACAAAATTTGGAAACATTACAGAAGCATACTTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TTTTGACAtt
gi|15 : T-----T-GTT--TTT--------------T-TG--TTTGTTCTATATACCA----TAT---GTATAGGTAAT-GTTT-------AT-------A--------TAAAACAAAAA--AA--A---AATC------TTT-CACTCTCCAGTTTGCATAATG--ACAAA---A-----------------A--AAACCCC----------AAAAACCT-TAATATTCT-GAGATAAAAACATCACTAATAAGCTT--AAAATAGTGCTTACGA---AGAAAAATAT--ACATG
gi|16 : ctttctAATTTACATGGTG--AAAGA---A-----------------A--AA----CAA--CAACA-AAAAA--TC----ATTCT-GAGATTAAAACATTTCTAATAACTTT-AGAAATATTATCTGTAG---AGAAAACTAA--ACATGCAGATTCGAGAGAAACTA--A---GA--AA-CA-----C-ATGT----TTATGTT---TGAACTGATTAATGTAA-AG-ATAA-----T-T---ATTA-CCATTACTATT----TC------AAA-CATATATCTaacataaa
gi|17 : AAAACATGTGGAATTCT-GAGATTAAACCATTTCTAGTTACATT-AGAAATAGTGTTTCTAA---AGAAAACTAT--ACATGTAGAATGGAGAGAAAACAAGA---AA--AA-AA-----C-TTGT----TT----T---T-AACTAATAAATGAAA-AG-AATAAATG-A-T---TTAATCTA-CATGAATT--A-C------AAT-T-TA
gi|18 : accttccacttcaatac-TTTCATATCCTT-AAC-AGAATAATACCTTGATAC--TGCAA-A------CTTTTC-ATCTTATAGGCAATTT-TCATCA---------A-------------------------------A-----ATGTT-ACTT--------GAG--------ATT--TTTAAAAAAAACAACACT-TGTTTTTGTTCCATATATCA----TAT---ATAGAGAT---------------------------------T---------A--G-------------------T-TTCTCTCCAGTTTGCATGGTT--AAAGA---A-----------------A--AA----aaaaatac
gi|19 : aTGTGCTTATTA----CAATA-TA------ATGTAAATGATATGTAACACTTATTTATTCTACCTACGC---CTTCTTCTCAAGTTTTGCATCACT-AAACAATGAAACAAACACATTTTAAATCATCATGAGGATATGAAAGTATGTTTTATTTTTCTT-TG-TTACACTAa
gi|2 : aatgagtgaaatgATCAATTTTCATCAGTAATAAATGTTTATAAATGTACTAATGTGATAACTAATTAGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACTTAA-TAAAATTTTAATACTGGGAAAATAGCA-----C------ATGTTCTATCA-AAA-TCAAAAAAAGGTGGAACCATCT----TGTATCAATTTTATAAATTACTTAAACTCAGTTTACAAAATTGAAAGATA--TAT-------------------------GCACTTTAACAACATTTGGAAACATTTCATAAGCATAATTTCTGAAACTCTCTAGTTATAC------CAACATTCTA-CAA---TATTGACAAAAACTATTATGTTGACTACTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGATTTATATACATA-ATATTAGT----ATATATTTTGATACGT----------GTGTCTGTGA-TGCCTTTCCTTTTTTTTTCTGTTGTCTATGT---------------AAAAT-ATGTTG----TTGT-TTTTGTGCTTATAA----CAATA-TA------ATGAAAATAAATTGT--AATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGATACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTACTTTTC-T-GGTTTATACTAGTATTGGAAAA-AAAATACATATAAAACT-AGTTCCTTTAAGA
gi|2 : GGATAGCAATAATCAACTAGCCAATTACTCTCATAACA-TTTGGTCTTTTTTACTCATAGTTTCATGAC-ATCTTGAAATACAAGTATAATATT--------------CAA--------AATGTT-----TA-AATTTTT---AAATGTAAAA-------------------------TAACATTAACTGTAACAATTGTTTT-TTGCCCCTTACA-AAATAAACTTACACCATCCTTAATACACTCAATTAAT---AT-ACT---AGTCTATAAGAGTATTAAAGCCAAACTGT---CTTTATTTTTAGA-TTTCTTTTT---TGTTGCCTTATCGTATACCAACAG-AAGACAATAATAGTAAGTTGTGTACATTTTTGTTTAAAAAAAGAAACCACTATTGTTTCATACCC-TTAAA-AGAATAGCATCTAGAAAT--TAAAA-AAAAAACCTTACC-ATCAAATAAGCCTCTT-CCACCA---------AATTGTTATTCGA----------------GAAA-----AAGTCAACTT--------T-GT-----T-GTT--TTT--------------T-TG--TTTGTTACATATATCGCT--TGTACAGTAGAGATAAT-G--T-------TT-------A--------T-------------A--A---AAT-------ACT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--GAAAT-TGA--AAA-A-AAAACCTTCTAAAATTCT-AGGATAAAAACATCTGTAAT-ATTTTT-----------TT-------AGAAAAATAT--ACACGCGGAATGAAGAGAGAAGA--A---AA--AA-AC-----A-CTAT----TTA---attaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattggatagcaataatcaactagccaattactctcataacatttggtcttttttactcatagtttcatgacatcttgaaatacaagtataatattcaaaatgtttaaatttttaaatgtaaaataacattaactgtaacaattgttttttgccccttacaaaataaacttacaccatccttaatacactcaattaatatactagtctataagagtattaaagccaaactgtctttatttttagatttcttttttgttgccttatcgtataccaacagaagacaataatagtaagttgtgtacatttttgtttaaaaaaagaaaccactattgtttcatacccttaaaagaatagcatctagaaattaaaaaaaaaaccttaccatcaaataagcctcttccaccaaattgttattcgagaaaaagtcaactttgttgtttttttgtttgttacatatatcgcttgtacagtagagataatgtttataaaatactctctctccagtttgcatggtgacagaaagaaattgaaaaaaaaaccttctaaaattctaggataaaaacatctgtaatatttttttagaaaaatatacacgcggaatgaagagagaagaaaaaaacactatttaag
gi|20 : atcaattttcatcagtaataaatgtttataaatgtactaatgtgataactaattagtcggtttcagatataattctagggaataataactatgatttaatacttaataaaattttaatactgggaaaatagcacatgttctatcaaaatcaaaaaaaggtggaaccatcttgtatcaattttataaattacttaaactcagtttacaaaattgaaagatatatgcactttaacaacatttggaaacatttcataagcataatttctgaaactctctagttataccaacattctacaatattgacaaaaactattatgttgactactgttacaatgaattatctgagtatgtatatacatttgcagatttatatacataatattagtatatattttgatacgtgtgtctgtgatgcctttcctttttttttctgttgtctatgtaaaatatgttgttgtttttgtgcttataacaatataatgaaaataaattgtaatttttttctacctacaccttctcaatttttgcttcactaaacaatgatacaaacaaattttaaatcatcatgagggtatgaaaatgtgttttacttttctggtttatactagtattggaaaaaaaatacatataaaactagttcctttaagaattaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattTGTACTTATAA----CATTA-TA------AATTAAATATTATGT--CATTT--AT-T-CTACCTACACATTCTTCT---CAATTTTTACTACACT-AAACAATCAAAAAAACACATTTAAAATCGTCATGAGGATATGAAAATGTGTTTTAATTTTCTT-TG-TTATACTag
gi|21 : ataTAAATATAATAATACTTAACAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-TCACCA---------A-------------------------------A-----ATATT-ATTTGAGAAAAAG-ATAACCAT-GTTAATTT--------------T-T---TTT-TTTCATATGTC------AT---GTAG
gi|22 : gagaaATAATGTCCTCGATTTAGAGAAATCTTTACATGCAGAATATAGATAAAAGA--A---GA--AACAA-----A-CTATAAAATT----T---TGAACTGATAAATGAAA-AG--AAAAATG-A-T---TTAATCTATTACAACTT--tcttgattttcgtagattgttttaaaata
gi|23 : CTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-ATTTTTC---AGATATtaaaaaa
gi|24 : ttgtgatataTTCATATGCCA----TAT---ATAGAGATAGT-G--T-------AT-------ACATAAGTTT---------A--AA--AAC-AATA------TTT-TTCTCTCTTATTTGCACGGTA--AAAGA---A-----------------cagttttctatagatgtaaaggttgagaaacaacccgaacgtatgttacatta
gi|3 : ttttttaaaGATAGGATAATGTGTTTTAATTTTC-T-GG-T---------ATTGG-AAT-GAAATACATAAAAATCT-AGCTACTTTACGA
gi|3 : ATATGTTCAAGACTACCTTGAAATAATAGTTTAACATTGTAAATATTGATAACTATTAAATGAAATGTTTCAGATATAATTTTCCATAGATGTAAAGGTTAAGAAACAACCTGAAAAATATATAACATTAATTGTAACAACTGACTT-TTGTCCCTTA-A-ATATACACTTACACTATTCTAAATATATTTAATTAAT---ATAACTAAGAG--TAT------------ACCAAATTATTGATTTTATCCTTAGACTTTTTTTAT---TATAGTCTT-TATTATACCGACAATAAGTCAATAATAATTTGTTGAATACA---ATTGTTAAAAAACGAAACCATTA-T-TTTCAAACCATTTAAA-AGAATAGCATTTAGAAATAAAAAAA-A------C-CTTC-ATCAAATAGGCCTTTT-CCACCA---------A-----------AATAGTATTC-------GAGAAAAAGACATC--CTT--------G-TT-----T-GTT--TTT--------------TATG--TTTGTTTCATATATCA----TTT---GTAGAGATAATAG--TTATATACAT-------A--------T---------A--AAATA---AATAATAATCTTT-CTCTCT-CAATATGCACGGTG--ACAAA---C-----------------A--AA----AAT--AGA-A-AACAACCCTTAAAATTCT-AAGATAAAAACAGTATTCATAA-TATTAGAAATAGTGCTTCTGA---AGAAAAGTAT--ACACACAGAATGGAGAGAAAAGA--A---GATGAA-AA-----C-CTGT----TTA---TCTACGAACAGATAAATAAAG-AT-AACAAATG-T-T---TCGATCTATTATTACTT---TC------AAA-A-TATATCTattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaatatgttcaagactaccttgaaataatagtttaacattgtaaatattgataactattaaatgaaatgtttcagatataattttccatagatgtaaaggttaagaaacaacctgaaaaatatataacattaattgtaacaactgacttttgtcccttaaatatacacttacactattctaaatatatttaattaatataactaagagtataccaaattattgattttatccttagactttttttattatagtctttattataccgacaataagtcaataataatttgttgaatacaattgttaaaaaacgaaaccattattttcaaaccatttaaaagaatagcatttagaaataaaaaaaaccttcatcaaataggccttttccaccaaaatagtattcgagaaaaagacatccttgtttgttttttatgtttgtttcatatatcatttgtagagataatagttatatacatataaaataaataataatctttctctctcaatatgcacggtgacaaacaaaaatagaaaacaacccttaaaattctaagataaaaacagtattcataatattagaaatagtgcttctgaagaaaagtatacacacagaatggagagaaaagaagatgaaaacctgtttatctacgaacagataaataaagataacaaatgtttcgatctattattactttcaaaatatatctatttc
gi|4 : gataggataatgtgttttaattttctggtattggaatgaaatacataaaaatctagctactttacgaattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaCCTATCAATTTTCAT----AAAAAA-----ATAATTGTCATAAAGTAATATCTAATTGGTCAGTTTCAGATATAATTCTAGGGAATAATAATTATGGTTTTACTTACT-AAATAAAATTTTGATACTGGCAAAATACCA-----CTGTGACATATTCTATCACAAA-CCAAAAAAGGGTAGAACCATCTAAAATGTGTCAATTTTATAAATTACTTAAATTAATTTTACAAAATTGAAAAATA--TGTAGCCTTAAAACAACT-AAAAGGTTTACACTTTAACAAAATTTGGAAACATTACATAAACATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTACCTACTTTATTGACAAAAAATATTATGTGGACTATTGTTTCAATGAATAATCTGAGTATG---NNNNNNNNNNNNN--NNNNNNNNNNNNNNNNN-N----NNNNN----------N----------NNNNNNNNNN-NNNNNNNNNNNTTTGATACGAGTGTCTGTG------------------------ATTG----CCTTCCTTTTTTCTTCT---------TT-CT------ATGTAAAAAAAATG-------T--TG-CTCTACTTACAC---CTTCT---CAATTTTTGCTTCACT-ATACAATGAAACAAACAAATTTTAAATTATCATGAGGCTATGAAAATGTGTTTTAATTTTC-TGGG-TTATACTAGTATTGG-AAT-AAAATACATGTACAATT-AGCTACTTTAAGAatttc
gi|5 : ttttttcagtttttttaaacaattaacaacttttGGCTGGCAAGTAACAGCTAGTCAAATC-TTTCATA-----------TTTTTTTCTCATATTTTCATGACTAGCTTGCA----TAG------ATG--------------TTA--------AAT-TT---GGAA-AACAACC---TGAACTTATG-------------------------TAACATTAATTGTAACAATTGCCGA-TTGTCCCTTA-A-ACATACATTTACACCATATTAAATACACTTAAT--ATTCCAA-AC----AA--TAT------------GTCAACTTGTTATTTTTATCTTTTGA-TATTTTTATGAATATTGTCTCGCCATA----AACTG-AAGTCAGTTTTACTATGTTGAATAAA---AAAATCAAAAA--TAAATCATTAGT-TTTCATACCCTTT-AA-AGTATAACATCTTGATAC--TAAAA-A------CTGTTT-ATCAAATAGTGTTTTT-TTATTATAATTCGAGA-----------A----------------AAAA-----AAA--------------------------ACT--TTT--------------T-T---TTTGTATCACATGTCA----TAT---GTACAGATAAT-G--T-------AT-------A--------T---------ATGAA--ATATAGT-------TTTATTCTTTCCAATTTACATGGCG--AAAGA---A-----------------A--AA----CGA--AAA-A-ACAAAagtaaagggtcacatggcaattttta
gi|6 : aaattaaaaggatacatggcaaattcattctgttttaacaaacactgcttcttgagaacggtttaacacggatatagaacagctctgtgacgtttatcaaactcttaactttgctggtagattgtaaaagggacaaatcactcggaaattatttaaaaacatttttt----ATACA----------A----------GTGTCTGTGAATGACCTTCCTTTTT-CTTTTGTTGTCTATGTCTATTTATGAAAATAAAAAACATGCTGAACGTGTTTTTTTGTGCTTATAAATAACAATA-TG------ATATAAATAACATGT--CA-TT--TT-TTCTATCTACAC---CTTCT---CAATTTTTGCTTCACTAAAACAATGTACCAAACAAATTGTTAGTCTTCATAAGGGTATGAAAAT------------------G-TTATACTATTATTGG-AACAAAAATACATGTAAAACT-AGCTA--TTAAGA
gi|6 : attttgATGGCACGTATCAACTAATCAATTCCTTTCATAA---TTTG------TTTACTCATGTTT--GTGATTTGCCCAAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-ATTTTTC---AGATATattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtatggcacgtatcaactaatcaattcctttcataatttgtttactcatgtttgtgatttgcccaaaatactagtttaacattctaaatgttaataatttttcagatatctgttttctatagatgtaaaggttgagaaacaacc
gi|7 : attttgatacaagtgtctgtgaatgaccttcctttttcttttgttgtctatgtctatttatgaaaataaaaaacatgctgaacgtgtttttttgtgcttataaataacaatatgatataaataacatgtcattttttctatctacaccttctcaatttttgcttcactaaaacaatgtaccaaacaaattgttagtcttcataagggtatgaaaatgttatactattattggaacaaaaatacatgtaaaactagctattaagaattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtCCTTA-A-AAAGAAACTTACCCCATTCTAATTACACTTTATAAAT---AT--------G--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-AC-CTTTAT---TATTGTCTTGCCATATACCGACAG-AAATCAATTAAAATCTGTTGAATACA---ATATTTAAAAAACGAA---ACTATT-TTTCATACCC-TTAAA-AAA--AACATCTAGAAAT--TA---------------------AAATAGGCCTCTTCCCACAA---------A-----------ATGTCATTTGAGATAACGACA-----ACATT-GT-------------T-----T-GTT--TTT--------------T-TG---------CATATATCA----TAT---GAAGGGATAAT-G--T-------AT-------A--------TATAAAATA-A--AA--A---AATAATC---TTT-CTCTCTCCAATTTGCATGGTG--ACAGA---ACTCCCCCCCCCCCCCCCA--CA----C--------A-CAAACCTT---AAATTCT-GAGATTAAAACACTCCTAATAATTT-------TAGTGCTTCCAA---AGATAATTAT--ACATGCAGAATGGAGAGAAAAGAAGA---AA--AA-AA-----C-CTAA----TTC---T---T----TGTTTA----------AAATATTG-T-TA--ACAAT--ATTTATATGT--ATC------AAA-T-ctgttttctatagatgtaaaggttgagaaacaacc
gi|8 : atGTAGCCTTTAAGCAGCT-AA--GATTTGCACTTCAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAAACTCTTTAGTTGTACATGTACCAACATTCTA-CTA---TGTTGACAAAAATTATTATGTGCACTATTGTTACAATGAATTGTCTGAGTATGTATATACATTTGCAGA--TATATATA--CATATCA-TTAATATATA----------TTTTGATAAGAGTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTTTATGT---------------AAAAA-ATGGTG----TTAT---TTGTGCTTATAA----CAATA-TACCGTTAATGTAAATAACATGT--CATTT--TG-TTCTACCTACAC---CTTCT---CAATGTTTGCTTCACT-AAACAATACAACAAACAATTTTCAAATCATCATGAGGGTATAAAAATGTGTTTTAATTTTC-T-tgtaaaatgcactac
gi|9 : A---------A-----------A----------------AACA-----ACATT-ATTT------------------------------------------------TTGTTTCATATGTCA----TAT---GTAGACATAAT-G--CTTA----AT-------A--------T---------A--AA--AT--AAT-------TT----------AATTTGCACGGTGTAACAGA---ATCCT-------------A---------GA--AAA-A-AAACACT--TAATATCCT-GAGATTAAAACGTTTCTTATAA-CTTAAGAAATAATGTT---------------TAT--ATATACAGAATGGAGAGAGAAGA--AGATAA--CA-AA-----G-CTGT----TTATTTT---TAAACTGATAAATGAAA-AGAAAAAAATGAT-T---A-AATCTATTACTATTT---TC------AAA-A-TACATa
blockSeqs : CAGT TGTTTA CT T AT A CTGTGAC ACAAA A AAAA A . A AG T A GAAA ATGTAC C CTT C T TT NNN TTAAT TTTTGATACGT A T TCTATTTATGAAAATA AC AACG G C T ATAA . CCGTTA T AA C AT A ATT TCT A C A T T GG T T A A . A A C ACATTTGGTC T A GTAAATATTGATAACTATTAAATGA TCAGA T CAT GTTAAGAAACAACCTGAAAAATATA C CA A TCC ACTAGTCTATAAGAGTATTAAA C CTTT GAA G G T T A T TTT A C T G T T AA T AAAAAC TC A C AAATAGTATTCGAGAAAAAGACATCCTTGTTT AA AAAAAAAACAACACTTGTT C TAAT ACA A TTATATACATATAAAATAAATAATAATCT A TA GAT CTCCCCCCCCCCCCCCCACAC C . C A A T T G CCA TTT TT AG GAT TG C CAACCC AAAA AGTTA A T A T A TA ACA TAAT TT
blockSeqs : . A . . T G C AAAA C . C . G AG A A AAAA . . . A T . TA GT TTTTGATAAGA . G T T . T T A . . . A . T . . . . . A G C T T . T . . . A T C ATTTG T T CAA AA . . . . A T . AACTAAGAGTAT A TTT . A G . A G A . G A T . T . . . GGC TT . . AATTGTTATTCGAGAAAAAGTCAACTTTGTT . TATG C CT . . TTTATATAAAACAAAAAAAAAATCT . . . AGAAATTGA . . T . A T T A CCG . . AG . . T CT . AACTA G T A . . AT A ATC CA
blockSeqs : C . C . T . G AG T G AA . . . T . . C N N . T T A . T . A . . . T . T . . . . . C A A . G . T . . . C T . . T T CTA GG . . . . A T . ACAATAT T TAT . G T . A A T . T C G . T . . . . TT . . AATGTCATTTGAGATAACGACAACATTGTTT . TTG A . . . TATATATAAAATAAAAAAATAATCT . . . ATAAATAG . . C . A A A T CCA . . . . . C T . ATGTT G T T . . T . TA T
blockSeqs : . . . . . . . . A . . . . . A . A . . . A . T . . . . . A A A . T . T . . . . T TTA AA . . . A A . GTAT C AC . G A . T C A . A C T . T . . . . TC . . AAATATTATTTGAGAAAAAGATAACCAT . TTG C . . . TATATATAAAATAAAAAATAATCT . . . AAAACCCC . . C . A G T G ACG . . . . . . C . ATCTA G A A . . T . AA T
blockSeqs : A . . . C . . . . . . . A C A . G . T . CTA . . . A . . GTAT . AC . . A . T A C . A . . . . . . . . TG . . AAGACAGCCTTGTTTGTTTT . TTG C . . . TATACATAAGTTTAAAAACAATAT . . . AGAAATT . . G . T C T T GTA . . . . . . C . ATTTT G A A . . T . TC T
blockSeqs : . . . . C . . . . . . . A G A . . . . . . . . . . C . . TAATTCGAGAAAAAAAAA . TTG A . . . TATATATGAAATATAGTT . . . TCCTAGA . . C . T C A G CTA . . . . . . A . CT G A A . . A . AC A
blockSeqs : G . . . . . . . . . AAAACAACATTGTTGTT . TTG T . . . CTTAATATAAAATAATT . . . AAAAGA . . T . A T . A TCG . . . . . . A . A A A T . . A . TC T
blockSeqs : AAAACAACATTATTT . TTG T . . . TATATAAAAGAATC . . . AAACAA . . . . A T . G CTG . . . . . . C . T . T A . . T . TC A
blockSeqs : AAATGTTACTTGAG . TT T . . . TATATAAACAATC . . . AAAAAT . . . . T . . G CCA . . . . . . C . T . A . . . T .
blockSeqs : . TT T . . . TTTATAAAATA . . . AAACGA . . . . T . . A . . . . . . . G .
blockSeqs : . . T . . . TAG . . . . . . .
blockSeqs : . . . . . . . . . .
blockSeqs : . . .
blockSeqCons : AG T*************** AA*** A** ACAAGTAT****************** AGAAAN************************* ATCTA*** TC*********
originalCons : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AAAAAA-----ATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACT-AA-TAAAATTTTGATACTGGGAAAATACCA-----C------ATATTCTATCA-AAA-CNAAAAAAAGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGA--TATATATATACATATCA-T----ATATA----------T----------GTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTAATTTTC-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-A-TTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---GATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTAATTAAT---AT-ACT---AG--TAT------------GTCAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACA---ATNTTTAAAAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---A-----------------A--AA----CGA--AAA-A-AAAAACTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTAT----TTA---T---TGAACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTT--ATC------AAA-T-TATATCT
finalCons : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AAAAAA-----ATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACT-AA-TAAAATTTTGATACTGGGAAAATACCA-----C------ATATTCTATCA-AAA-CNAAAAAAAGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGA--TATATATATACATATCA-T----ATATA----------T----------GTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTAATTTTC-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-A-TTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTTAA---TA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTAA--AAATAAACTTACACCATTCTAAATACACTTAATTAAT---ATACAAGTAT------------------GTCAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACA---ATNTTTAAAAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGA---AAGAAAN-------------------------AAA-A-AAAAACTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTAT----TTATCTA---TGAACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATCCATTATTACTTTC---------AAA-T-TATATCT
Alignments
lowQualScore : 1111111111111111111111111
lowQualScore : 2222 444444 11 1 22 444444444444 111111 2222 11 22222 222222 111 11 111 222222 666666666666666666666 5555555555555555 1111 1 1111 111111 111 111 1 33333333333 4444444444444444444444444 22222 111 0000000000000000000000000 111 66666666666666 1111 1111 111 111 1 222222 7777777777777777777777777777777777777777777777777777777777777777777777777777 11111111111111111111 1111 666666666666666666666666666666666666666666666666666666666666 333333333333333333333333333333333 1 11 1111111 111 1111111 111
lowQualScore : 8888 000000 88 3 00 3 0 777777777777 444444 1 0 1111 1 33 3 55 1 4 11111 0 333333 8 444 1 0 3 33 000 000000 888888888888888888888 8 5 8888888888888888 99 7777 1 3 1 2222 5 666666 1 77 3 77 5 000 000 5 1 2 0 3 0 55 5 1 8 8 8 1 1 2 44444444444 3 0 3 2222222222222222222222222 55555 6 111 0000000000000000000000000 8 888 0 7 111 11111111111111 4444 1 4444 111 1 2 0 6 1 1 1 111 1 2 3 1 5 0 5 66 0 5 333333 22 5 5 4444444444444444444444444444444444444444444444444444444444444444444444444444 44 88888888888888888888 3 0000 555 3 444444444444444444444444444444444444444444444444444444444444 3 44 333333333333333333333333333333333 55 6666 3 1 7 1 2 222 555 0 44 00 666 55 7 4444444 7777 555 3 4 1 4 4 555 777 66 4 666 4444444 5 4 000
lowQualScore : .... ...... .. . .. . . ............ ...... . . .... . .. . .. . . ..... . ...... . ... . . . .. ... ...... ..................... . . ................ .. .... . . . .... . ...... . .. . .. . ... ... . . . . . . .. . . . . . . . . ........... . . . ......................... ..... . ... ......................... . ... . . ... .............. .... . .... ... . . . . . . . ... . . . . . . . .. . . ...... .. . . ............................................................................ .. .................... . .... ... . ............................................................ . .. ................................. .. .... . . . . . ... ... . .. .. ... .. . ....... .... ... . . . . . ... ... .. . ... ....... . . ...
lowQualScore : 3333 777777 33 3 77 7 2 888888888888 222222 0 2 2222 2 88 2 88 0 0 22222 6 000000 0 000 2 2 2 88 555 555555 222222222222222222222 0 6 8888888888888888 00 0000 0 2 7 1111 7 444444 7 99 6 99 7 000 000 7 3 2 1 2 0 77 7 7 0 0 0 0 0 5 00000000000 8 8 3 3333333333333333333333333 55555 7 777 0000000000000000000000000 0 333 3 8 777 55555555555555 2222 0 0000 777 0 2 7 7 0 5 0 777 0 5 2 4 0 4 0 99 1 0 111111 44 0 0 9999999999999999999999999999999999999999999999999999999999999999999999999999 22 22222222222222222222 0 0000 000 1 666666666666666666666666666666666666666666666666666666666666 1 22 999999999999999999999999999999999 00 1111 6 0 2 3 3 111 888 4 66 00 444 00 3 1111111 7777 222 6 0 0 4 4 777 888 11 4 222 4444444 7 4 777
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AAAAAA-----ATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACT-AA-TAAAATTTTGATACTGGGAAAATACCA-----C------ATATTCTATCA-AAA-CNAAAAAAAGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGA--TATATATATACATATCA-T----ATATA----------T----------GTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTAATTTTC-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-A-TTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---GATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTAATTAAT---AT-AC----------GAGTAT----GTCAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACA---ATNTTTAAAAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGAA-----------------A--AA-A----A--N-A--AAAAAAAA-CTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTA----TTTA-NTTATGA-ACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATC--CATT-ATTAC--TT-------TAA-AA-T-TATATCT
Reference ( family-468 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATCAATTTTCAT----AAAAAA-----ATAAATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACT-AA-TAAAATTTTGATACTGGGAAAATACCA-----C------ATATTCTATCA-AAA-CNAAAAAAAGGTAGAACCATCT----TGTGTCAATTTTATAAATTACTTAAATTCAGTTTACAAAATTGAAAAATA--TGTAGCCTTTAAACAACT-AAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TATTGACAAAAATTATTATGTGGACTATTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGA--TATATATATACATATCA-T----ATATA----------T----------GTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTCTATGT---------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATA-TA------ATGTAAATAACATGT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGAAACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTAATTTTC-T-GG-TTATACTAGTATTGG-AAT-AAAATACATATAAAACT-AGCTACTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGCANGNATCAACTAGTCAATTCCTTTCATAA-A-TTTGGTCTTTTTTACTCATATTTTCATGACTAGCTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-AATTTTC---AGATGTAAAG-------------------------TAACATTAACTGTAACAATTGCCTT-TTGTCCCTTA-A-AAATAAACTTACACCATTCTAAATACACTTAATTAAT---AT-AC----------AAGTAT----GTCAAATTGTTGCTTTTATCTTTAGA-TTTCTTTAT---TATTGTCTTGCCGTATACCGACAG-AAGTCAATNATAATNTGTTGAATACA---ATNTTTAAAAAACGAAACCACTATT-TTTCATACCCTTTAAA-AGAATAACATCTAGAAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACATT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTNCATATATCA----TAT---GTAGAGATAAT-G--T-------AT-------A--------T---------A--AA--A---AAT-------TTT-CTCTCTCCAGTTTGCATGGTG--ACAGAA-----------------A--GA-A----A--N-A--AAAAAAAA-CTTCTAAAATTCT-GAGATNAAAACATCTCTAATAATTTTTAGAAATAGTGCTTCCGA---AGAAAAATAT--ACATGCAGAATGGAGAGAGAAGA--A---AA--AA-AA-----C-CTA----TTTA-TCTATGA-ACTGNTAAATGAAA-AG-AAAAAATG-T-T---ATAATC--CATT-ATTAC--TT-------TCA-AA-T-TATATCT
gi|1 : CCTATCAATTTTCAT----AAAAAA------TAGATGTACTAATGTAATAACTAATTGGTCGGTTTCAGATGTAACTCTAGGGAATAATAACTATGATTTAA--GACT-AA-------------ACTGGGAAAATATCAAAATTT------ATATTCTATCA-AAAACAAAAAAAATGTAGAACCATAT----TGTGTCAATTTTATAAATAACTTAAATTCAGTTTACAAAATTGAAAAAAAAATGTA-CCTTTAATTAACTTAAA-GATTTGCACTTTAACAAAATTTGGAAACATTACATAAGTATAAGTTCTGAACCTCTCTAGTTGTAC------AAACCTTCTA-CTA---TATTGACAAAACTTATTATGTGAACTATTGTTATAATGAATTATCTGAGTATGTATATACATCTGTTGA--TATATATATACATATCA-T----ATGTA----------T----------ATATTTGTGA-TGCCCTTCATTTTTTCTTCTGTTGTTTATGTA--------------AAAAA-ATGTTG----TTTTCTTTTGTGCTTATAA----CAATATTA------ATGTAAATAACATAT--CATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCAAT-AAACAATGAAACAAACACATTTCAAATCATCATGAGTTTATGAAAATG--------TTTCC-T-GG-TAATACTAGTATTGG-AAT-AAAATACATATAAAACTAAGCTACTTTTAGA
gi|1 : atgaaaatttccatctcttaaaattgtagtttttgtgataaatctgtagaaaccattaaacgtcttttctatgattgtgaaatatcaaagacattttaggcaaaGGATAGCATGAATCAATTGATCAATTCCTTTCATAA-AATTTGGTCTTTTTTACTTATATTTCCATGACTAGCTTGAAATACTAGTGTAACATT--------------CTA--------AATGTT-----TA-AATTTTT---AAATGTAAAG-------------------------TAACATTAACTGTAACAATTGCTTT-TTGCCCCTTA-CTAAATGAACTTACACCATCCTTAATACACTCAATTAAT---AT-AC----------TAGAAC----ATGAGAGTATTACTTT-ATCTTTATA-TTTCTTTAT---TGTTGCCTTGCCATATACCAACAG-AAGACAATAATACTATGTTGAATACA---ATTTTTCAAAAAAGAAACCACTATCATTTCATACCCTTTAAA-AGAATAGCATCTGGAAAT--TAAAA-A------CTTTTC-ATCAAATAGGCCTCTT-CCACCA---------A-----------A----------------GACA-----ACACT-GTTT--------G-GT-----T-GTT--TTT--------------T-TG--TTTGTTGCATATATCA----CAT---GTAGAGATGAT-G--T-------GT-------A--------T---------A--AA--A---AAT-------CCT-CTCTCTTCAGTCTGCATGGTG--ACTGAA-----------------T--GA-AATTGA--A-A--AAGAAAAA-CTTCTAAAATTC--GGGATGAAAACATCTGTAATAATTTTTAGAAATATTGCTTCTGA---AGCAAAATAT--ACATGCAGAATGAGGAGAGAATA--A---AA--AA-AA-----C-CTA----TTTAGT---TGA-ATTGTTAAATAAAA-AG-AAAAAATG-T-T---ATAATC--CATT-ATTAC--TTATCTTACTTA-AA-T-TATATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggatagcatgaatcaattgatcaattcctttcataaaatttggtcttttttacttatatttccatgactagcttgaaatactagtgtaacattctaaatgtttaaatttttaaatgtaaagtaacattaactgtaacaattgctttttgccccttactaaatgaacttacaccatccttaatacactcaattaatatactagaacatgagagtattactttatctttatatttctttattgttgccttgccatataccaacagaagacaataatactatgttgaatacaatttttcaaaaaagaaaccactatcatttcataccctttaaaagaatagcatctggaaattaaaaacttttcatcaaataggcctcttccaccaaagacaacactgtttggttgtttttttgtttgttgcatatatcacatgtagagatgatgtgtataaaaaatcctctctcttcagtctgcatggtgactgaatgaaattgaaaaagaaaaacttctaaaattcgggatgaaaacatctgtaataatttttagaaatattgcttctgaagcaaaatatacatgcagaatgaggagagaataaaaaaaacctatttagttgaattgttaaataaaaagaaaaaatgttataatccattattacttatcttacttaaattatattt
gi|10 : atgaaaatttccatctcttaaaattgtagtttttgtgataaatctgtagaaaccattaaacgtcttttctatgattgtgaaatatcaaagacattttaggcaaacctatcaattttcataaaaaatagatgtactaatgtaataactaattggtcggtttcagatgtaactctagggaataataactatgatttaagactaaactgggaaaatatcaaaatttatattctatcaaaaacaaaaaaaatgtagaaccatattgtgtcaattttataaataacttaaattcagtttacaaaattgaaaaaaaaatgtacctttaattaacttaaagatttgcactttaacaaaatttggaaacattacataagtataagttctgaacctctctagttgtacaaaccttctactatattgacaaaacttattatgtgaactattgttataatgaattatctgagtatgtatatacatctgttgatatatatatacatatcatatgtatatatttgtgatgcccttcattttttcttctgttgtttatgtaaaaaaatgttgttttcttttgtgcttataacaatattaatgtaaataacatatcatttttttctacctacaccttctcaatttttgcttcaataaacaatgaaacaaacacatttcaaatcatcatgagtttatgaaaatgtttcctggtaatactagtattggaataaaatacatataaaactaagctacttttagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTGCCTTCTTATCC-TTA-A-AAAGAAACTTACCCCATTCTAATTACACTTTATAAAT---AT---------------GTAT----GTCAAATTGTTGCTTTTATCTTTAGA-AC-CTTTAT---TATTGTCTTGCCGTATACCAACAG-AAATCAATTAAAATTTGTTGAATACA---ATATTTAAAAAACATAACTACTTTT-TTTCATACCCTTAAAG-AAAATAACATCTAGAAAT--TAAAATAGGC---CTCTTCAAACAAA-ATGTCTTTT-GAGATA---------A-----------A----------------AACA-----ACATT-GTT-----------GT-----T-GTT--TTT------------------------TTCCATATATCATAATTAT---GTAGAGAAAAT-G--T-------ATATATAAAA--------T---------A--AA--A---AATAATC---TTT-CTCTCTCCAATTTGCA
gi|11 : ---------A-----------A----------------GACA-----GCCTT-GTTT--------G-TT-----TTGTT--TTT--------------T-TG--TTTGTTCCATATATCG----CAT---GTAGTGATAAT-G--T-------AT-------A--------T---------A--AA--AG--AAT-------CTT-CTCTCTCCAGTTTGCATGGTG--ACAGAG-----------------A--TA-A----A--T-AGGAAAAAAAA-CCCCTAAAATTCT-GAGATAAAAACATCTTAAATACTTTTTAGAAATAGTGCTTCCAG---ACAAAAATAT--ATATGCAGAATGAAGGGAGAAGA--A---AA--AACAACAACCC-CTA----TTTA-GTTATAA-ATTGTTAAATAAAA-TG-AAAAAATG-T-T---ATAATC--CATT-ATTAC--TT-------TAA-AATT-TATATCT
gi|12 : tgttcaggaggT--TTT--------------T-TG--TTTA----ATATATTA----CAT---TTAGAGATACT-G--T-------AT-------A--------T---------A--AA--C---AAT-------CTT-CTCTC--CAGTTTGCATGGTG--ATAGAG-----------------ATAAA-A----A--G-A--AAAAAAAA-TTTTTAAAACTCT-GAGATAAAAACATCTCTAGTAATTTTTAGAAATAATGCTTCCGA---AGAAAAATAT--ACATGCAGAACGGAGAGATAAGA--A---GA--GT-AC-----CTCTA----TTTA-ACTATGA-ACTGTT-AACAAGATAG-AAAAAATG-T-TACAATAATC--TATT-TTTAC--TT-------TAATAA-T-TATATCTatgt
gi|13 : tta-----------A----------------GATA-----ACCTT-GTTT--------G-TT-----T-GTT--CTC--------------T-TG--TTTGTTATATATATCA----CAT---GT--------------------------------------------------------------------------CTCTCTCCAATTTGCATGGTG--ACAGAA-----------------A--GA-A----A--TTA--AAAAAAAA-CTTCTAGAATTCTAGAGATAAAACCAATTTTAATAAAGTTAAGAAATATTGCTTCCAA---AGAAAAATAT--TCATGCAGATTGAAGAGAGAAGA--A---AA--AA-TA---------A----TTTA-ATTATGA-ACTATTAAATAAAA-AG-AAAAAA-A-TAT---ATAATC--CATT-AT-----TT-------AAA-AA-T-TATATCTttt
gi|14 : ACTGGGAAAATACCA-----C------ATATTCTATC------CAAAAAAAAAATAGAACAATCT----TGTGTCAATATCAAAAATTACTTAAAATCAGTTGACAAAATTGAAAAATA--T-TAGACTTTAAACAACTGAAA-GATTGACACTTTAACAAAATTTGGAAACATTACAGAAGCATACTTTCTGAACCTCTCTAGTTGTAC------CAACATTCTA-CTA---TTTTGACAtt
gi|15 : T-----T-GTT--TTT--------------T-TG--TTTGTTCTATATACCA----TAT---GTATAGGTAAT-GTTT-------AT-------A--------TAAAACAAAAA--AA--A---AATC------TTT-CACTCTCCAGTTTGCATAATG--ACA-AA-----------------A--AA-A----A--C-C--CCAAAAAC-CT--TAATATTCT-GAGATAAAAACATCACTAATAAGCTT--AAAATAGTGCTTACGA---AGAAAAATAT--ACATG
gi|16 : ctttctAATTTACATGGTG--AAAGAA-----------------A--AACA----A--C-A--ACAAAAAA---TC----ATTCT-GAGATTAAAACATTTCTAATAACTTT-AGAAATATTATCTGTAG---AGAAAACTAA--ACATGCAGATTCGAGAGAAACTA--A---GA--AA-CA-----C-ATG----TTTA-TGTTTGA-ACTGATTAATGTAA-AG-ATAA-----T-T---ATTA-C--CATT-ACTA---TT-------TCA-AA-CATATATCTaacataaa
gi|17 : AAAA-CATGTGGAATTCT-GAGATTAAACCATTTCTAGTTACATT-AGAAATAGTGTTTCTAA---AGAAAACTAT--ACATGTAGAATGGAGAGAAAACAAGA---AA--AA-AA-----C-TTG----TTT------TTA-ACTAATAAATGAAA-AG-AATAAATG-A-T---TTAATCTACATGAATTACAATT-------TAA-AA-
gi|18 : accttccacttcaatac-TTTCATATCCTT-AAC-AGAATAATACCTTGATAC--TGCAA-A------CTTTTC-ATCTTATAGGCAATTT-TCATCA---------A-------------------------------A-----ATGTT-ACTT--------GAG--------ATT--TTTAAAAAAAACAACACT-TGTTTTTGTTCCATATATCA----TAT---ATAGAGAT---------------------------------T---------A--G-------------------T-TTCTCTCCAGTTTGCATGGTT--AAAGAA-----------------A--AA-A----aatac
gi|19 : aTGTGCTTATTA----CAATA-TA------ATGTAAATGATATGTAACACTTATTTATTCTACCTACGC---CTTCTTCTCAAGTTTTGCATCACT-AAACAATGAAACAAACACATTTTAAATCATCATGAGGATATGAAAGTATGTTTTATTTTTCTT-TG-TTACACTA
gi|2 : aatgagtgaaatgATCAATTTTCATCAGTAATAAATGTTTATAAATGTACTAATGTGATAACTAATTAGTCGGTTTCAGATATAATTCTAGGGAATAATAACTATGATTTAA--TACTTAA-TAAAATTTTAATACTGGGAAAATAGCA-----C------ATGTTCTATCA-AAA-TCAAAAAAAGGTGGAACCATCT----TGTATCAATTTTATAAATTACTTAAACTCAGTTTACAAAATTGAAAGATA--TAT-------------------------GCACTTTAACAACATTTGGAAACATTTCATAAGCATAATTTCTGAAACTCTCTAGTTATAC------CAACATTCTA-CAA---TATTGACAAAAACTATTATGTTGACTACTGTTACAATGAATTATCTGAGTATGTATATACATTTGCAGATTTATATACATA-ATATTAGT----ATATATTTTGATACGT----------GTGTCTGTGA-TGCCTTTCCTTTTTTTTTCTGTTGTCTATGT---------------AAAAT-ATGTTG----TTGT-TTTTGTGCTTATAA----CAATA-TA------ATGAAAATAAATTGT--AATTT--TT-TTCTACCTACAC---CTTCT---CAATTTTTGCTTCACT-AAACAATGATACAAACAAATTTTAAATCATCATGAGGGTATGAAAATGTGTTTTACTTTTC-T-GGTTTATACTAGTATTGGAAAA-AAAATACATATAAAACT-AGTTCCTTTAAGA
gi|2 : GGATAGCAATAATCAACTAGCCAATTACTCTCATAACA-TTTGGTCTTTTTTACTCATAGTTTCATGAC-ATCTTGAAATACAAGTATAATATT--------------CAA--------AATGTT-----TA-AATTTTT---AAATGTAAAA-------------------------TAACATTAACTGTAACAATTGTTTT-TTGCCCCTTACA-AAATAAACTTACACCATCCTTAATACACTCAATTAAT---AT-ACTAGTCTATAAGAGTATTAAAGCCAAACTGT---CTTTATTTTTAGA-TTTCTTTTT---TGTTGCCTTATCGTATACCAACAG-AAGACAATAATAGTAAGTTGTGTACATTTTTGTTTAAAAAAAGAAACCACTATTGTTTCATACCC-TTAAA-AGAATAGCATCTAGAAAT--TAAAA-AAAAAACCTTACC-ATCAAATAAGCCTCTT-CCACCA---------AATTGTTATTCGA----------------GAAA-----AAGTCAACTT--------T-GT-----T-GTT--TTT--------------T-TG--TTTGTTACATATATCGCT--TGTACAGTAGAGATAAT-G--T-------TT-------A--------T-------------A--A---AAT-------ACT-CTCTCTCCAGTTTGCATGGTG--ACAGAA-----------------A--GA-A----ATTG-A--AAAAAAAACCTTCTAAAATTCT-AGGATAAAAACATCTGTAAT-ATTTTT-----------TT-------AGAAAAATAT--ACACGCGGAATGAAGAGAGAAGA--A---AA--AA-AC-----A-CTA----TTTA-attaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattggatagcaataatcaactagccaattactctcataacatttggtcttttttactcatagtttcatgacatcttgaaatacaagtataatattcaaaatgtttaaatttttaaatgtaaaataacattaactgtaacaattgttttttgccccttacaaaataaacttacaccatccttaatacactcaattaatatactagtctataagagtattaaagccaaactgtctttatttttagatttcttttttgttgccttatcgtataccaacagaagacaataatagtaagttgtgtacatttttgtttaaaaaaagaaaccactattgtttcatacccttaaaagaatagcatctagaaattaaaaaaaaaaccttaccatcaaataagcctcttccaccaaattgttattcgagaaaaagtcaactttgttgtttttttgtttgttacatatatcgcttgtacagtagagataatgtttataaaatactctctctccagtttgcatggtgacagaaagaaattgaaaaaaaaaccttctaaaattctaggataaaaacatctgtaatatttttttagaaaaatatacacgcggaatgaagagagaagaaaaaaacactatttaag
gi|20 : atcaattttcatcagtaataaatgtttataaatgtactaatgtgataactaattagtcggtttcagatataattctagggaataataactatgatttaatacttaataaaattttaatactgggaaaatagcacatgttctatcaaaatcaaaaaaaggtggaaccatcttgtatcaattttataaattacttaaactcagtttacaaaattgaaagatatatgcactttaacaacatttggaaacatttcataagcataatttctgaaactctctagttataccaacattctacaatattgacaaaaactattatgttgactactgttacaatgaattatctgagtatgtatatacatttgcagatttatatacataatattagtatatattttgatacgtgtgtctgtgatgcctttcctttttttttctgttgtctatgtaaaatatgttgttgtttttgtgcttataacaatataatgaaaataaattgtaatttttttctacctacaccttctcaatttttgcttcactaaacaatgatacaaacaaattttaaatcatcatgagggtatgaaaatgtgttttacttttctggtttatactagtattggaaaaaaaatacatataaaactagttcctttaagaattaaagggtcacatggctattttctcatttcttgagagtgattaacacggtaatataatccttttatggtgttattcaaactctaaactgtgttggtaatttgtgaaagggacaaacctcttggaaactattgaaacaacaaacaaatttgcatattTGTACTTATAA----CATTA-TA------AATTAAATATTATGT--CATTT--AT-T-CTACCTACACATTCTTCT---CAATTTTTACTACACT-AAACAATCAAAAAAACACATTTAAAATCGTCATGAGGATATGAAAATGTGTTTTAATTTTCTT-TG-TTATACTag
gi|21 : ataTAAATATAATAATACTTAACAAT--TAAAA-A------CTCTTC-ATCAAATAGGCCTCTT-TCACCA---------A-------------------------------A-----ATATT-ATTTGAGAAAAAG-ATAACCAT-GTTAATTT--------------T-T---TTT-TTTCATATGTC------AT---GTAG
gi|22 : gagaaATAATGTCCTCGATTTAGAGAAATCTTTACATGCAGAATATAGATAAAAGA--A---GA--AACAA-----A-CTA----TAAA-ATTTTGA-ACTGATAAATGAAA-AG--AAAAATG-A-T---TTAATC--TATT-ACAAC--TT-------TAA-AA-tcttgattttcgtagattgttttaaaata
gi|23 : CTTGAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-ATTTTTC---AGATATaa
gi|24 : ttgtgatataTTCATATGCCA----TAT---ATAGAGATAGT-G--T-------AT-------ACATAAGTTT---------A--AA--AAC-AATA------TTT-TTCTCTCTTATTTGCACGGTA--AAAGAA-----------------cagttttctatagatgtaaaggttgagaaacaacccgaacgtatgttacatta
gi|3 : ttttttaaaGATAGGATAATGTGTTTTAATTTTC-T-GG-T---------ATTGG-AAT-GAAATACATAAAAATCT-AGCTACTTTACGA
gi|3 : ATATGTTCAAGACTACCTTGAAATAATAGTTTAACATTGTAAATATTGATAACTATTAAATGAAATGTTTCAGATATAATTTTCCATAGATGTAAAGGTTAAGAAACAACCTGAAAAATATATAACATTAATTGTAACAACTGACTT-TTGTCCCTTA-A-ATATACACTTACACTATTCTAAATATATTTAATTAAT---ATAACTAA-------GAGTAT----ACCAAATTATTGATTTTATCCTTAGACTTTTTTTAT---TATAGTCTT-TATTATACCGACAATAAGTCAATAATAATTTGTTGAATACA---ATTGTTAAAAAACGAAACCATTA-T-TTTCAAACCATTTAAA-AGAATAGCATTTAGAAATAAAAAAA-A------C-CTTC-ATCAAATAGGCCTTTT-CCACCA---------A-----------AATAGTATTC-------GAGAAAAAGACATC--CTT--------G-TT-----T-GTT--TTT--------------TATG--TTTGTTTCATATATCA----TTT---GTAGAGATAATAG--TTATATACAT-------A--------T---------A--AAATA---AATAATAATCTTT-CTCTCT-CAATATGCACGGTG--ACAAAC-----------------A--AA-A----A--T-A--GAAAACAA-CCCTTAAAATTCT-AAGATAAAAACAGTATTCATAA-TATTAGAAATAGTGCTTCTGA---AGAAAAGTAT--ACACACAGAATGGAGAGAAAAGA--A---GATGAA-AA-----C-CTG----TTTA-TCTACGA-ACAGATAAATAAAG-AT-AACAAATG-T-T---TCGATC--TATT-ATTAC--TT-------TCA-AA-A-TATATCTattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaatatgttcaagactaccttgaaataatagtttaacattgtaaatattgataactattaaatgaaatgtttcagatataattttccatagatgtaaaggttaagaaacaacctgaaaaatatataacattaattgtaacaactgacttttgtcccttaaatatacacttacactattctaaatatatttaattaatataactaagagtataccaaattattgattttatccttagactttttttattatagtctttattataccgacaataagtcaataataatttgttgaatacaattgttaaaaaacgaaaccattattttcaaaccatttaaaagaatagcatttagaaataaaaaaaaccttcatcaaataggccttttccaccaaaatagtattcgagaaaaagacatccttgtttgttttttatgtttgtttcatatatcatttgtagagataatagttatatacatataaaataaataataatctttctctctcaatatgcacggtgacaaacaaaaatagaaaacaacccttaaaattctaagataaaaacagtattcataatattagaaatagtgcttctgaagaaaagtatacacacagaatggagagaaaagaagatgaaaacctgtttatctacgaacagataaataaagataacaaatgtttcgatctattattactttcaaaatatatctatttc
gi|4 : gataggataatgtgttttaattttctggtattggaatgaaatacataaaaatctagctactttacgaattgaagggacaagtcgccattttcattctgatttaacatatactgtttcttgagagtgtttaacagggaaataaaagcgctctgtgatgtttatcaaactctaaactgtttccataaCCTATCAATTTTCAT----AAAAAA-----ATAATTGTCATAAAGTAATATCTAATTGGTCAGTTTCAGATATAATTCTAGGGAATAATAATTATGGTTTTACTTACT-AAATAAAATTTTGATACTGGCAAAATACCA-----CTGTGACATATTCTATCACAAA-CCAAAAAAGGGTAGAACCATCTAAAATGTGTCAATTTTATAAATTACTTAAATTAATTTTACAAAATTGAAAAATA--TGTAGCCTTAAAACAACT-AAAAGGTTTACACTTTAACAAAATTTGGAAACATTACATAAACATAATTTCTGAACCTCTCTAGTTGTAC------CAACATTCTACCTACTTTATTGACAAAAAATATTATGTGGACTATTGTTTCAATGAATAATCTGAGTATG---NNNNNNNNNNNNN--NNNNNNNNNNNNNNNNN-N----NNNNN----------N----------NNNNNNNNNN-NNNNNNNNNNNTTTGATACGAGTGTCTGTG------------------------ATTG----CCTTCCTTTTTTCTTCT---------TT-CT------ATGTAAAAAAAATG-------T--TG-CTCTACTTACAC---CTTCT---CAATTTTTGCTTCACT-ATACAATGAAACAAACAAATTTTAAATTATCATGAGGCTATGAAAATGTGTTTTAATTTTC-TGGG-TTATACTAGTATTGG-AAT-AAAATACATGTACAATT-AGCTACTTTAAGAatttc
gi|5 : ttttttcagtttttttaaacaattaacaacttttGGCTGGCAAGTAACAGCTAGTCAAATC-TTTCATA-----------TTTTTTTCTCATATTTTCATGACTAGCTTGCA----TAG------ATG--------------TTA--------AAT-TT---GGAA-AACAACC---TGAACTTATG-------------------------TAACATTAATTGTAACAATTGCCGA-TTGTCCCTTA-A-ACATACATTTACACCATATTAAATACACTTAAT--ATTCCAA-AC----------AA-TAT----GTCAACTTGTTATTTTTATCTTTTGA-TATTTTTATGAATATTGTCTCGCCATA----AACTG-AAGTCAGTTTTACTATGTTGAATAAA---AAAATCAAAAA--TAAATCATTAGT-TTTCATACCCTTT-AA-AGTATAACATCTTGATAC--TAAAA-A------CTGTTT-ATCAAATAGTGTTTTT-TTATTATAATTCGAGA-----------A----------------AAAA-----AAA--------------------------ACT--TTT--------------T-T---TTTGTATCACATGTCA----TAT---GTACAGATAAT-G--T-------AT-------A--------T---------ATGAA--ATATAGT-------TTTATTCTTTCCAATTTACATGGCG--AAAGAA-----------------A--AA-C----G--A-A--AAAACAAA-agtaaagggtcacatggcaattttta
gi|6 : aaattaaaaggatacatggcaaattcattctgttttaacaaacactgcttcttgagaacggtttaacacggatatagaacagctctgtgacgtttatcaaactcttaactttgctggtagattgtaaaagggacaaatcactcggaaattatttaaaaacatttttt----ATACA----------A----------GTGTCTGTGAATGACCTTCCTTTTT-CTTTTGTTGTCTATGTCTATTTATGAAAATAAAAAACATGCTGAACGTGTTTTTTTGTGCTTATAAATAACAATA-TG------ATATAAATAACATGT--CA-TT--TT-TTCTATCTACAC---CTTCT---CAATTTTTGCTTCACTAAAACAATGTACCAAACAAATTGTTAGTCTTCATAAGGGTATGAAAAT------------------G-TTATACTATTATTGG-AACAAAAATACATGTAAAACT-AGCTA--TTAAGA
gi|6 : attttgATGGCACGTATCAACTAATCAATTCCTTTCATAA---TTTG------TTTACTCATGTTT--GTGATTTGCCCAAAATACTAGTTTAACATT--------------CTA--------AATGTT---AATA-ATTTTTC---AGATATattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtatggcacgtatcaactaatcaattcctttcataatttgtttactcatgtttgtgatttgcccaaaatactagtttaacattctaaatgttaataatttttcagatatctgttttctatagatgtaaaggttgagaaacaacc
gi|7 : attttgatacaagtgtctgtgaatgaccttcctttttcttttgttgtctatgtctatttatgaaaataaaaaacatgctgaacgtgtttttttgtgcttataaataacaatatgatataaataacatgtcattttttctatctacaccttctcaatttttgcttcactaaaacaatgtaccaaacaaattgttagtcttcataagggtatgaaaatgttatactattattggaacaaaaatacatgtaaaactagctattaagaattaaagggacagatgccaatttttattctgtttttacaaatactgtttcttgaaagtgattaaaacggaaatagaatccctctgtggtaatttgtaaaagagacaaacagctattgaaaaaaaaatctatatttgcatatcgtCCTTA-A-AAAGAAACTTACCCCATTCTAATTACACTTTATAAAT---AT---------------GTAT----GTCAAATTGTTGCTTTTATCTTTAGA-AC-CTTTAT---TATTGTCTTGCCATATACCGACAG-AAATCAATTAAAATCTGTTGAATACA---ATATTTAAAAAACGAA---ACTATT-TTTCATACCC-TTAAA-AAA--AACATCTAGAAAT--TA---------------------AAATAGGCCTCTTCCCACAA---------A-----------ATGTCATTTGAGATAACGACA-----ACATT-GT-------------T-----T-GTT--TTT--------------T-TG---------CATATATCA----TAT---GAAGGGATAAT-G--T-------AT-------A--------TATAAAATA-A--AA--A---AATAATC---TTT-CTCTCTCCAATTTGCATGGTG--ACAGAACTCCCCCCCCCCCCCCCA--CA-C----A--C-A--AA---------CCTTAAATTCT-GAGATTAAAACACTCCTAATAATTT-------TAGTGCTTCCAA---AGATAATTAT--ACATGCAGAATGGAGAGAAAAGAAGA---AA--AA-AA-----C-CTAATTCTTTG-TTTAAAATATTGTTAActgttttctatagatgtaaaggttgagaaacaacc
gi|8 : atGTAGCCTTTAAGCAGCT-AA--GATTTGCACTTCAACAAAATTTGGAAACATTACATAAGCATAATTTCTGAAACTCTTTAGTTGTACATGTACCAACATTCTA-CTA---TGTTGACAAAAATTATTATGTGCACTATTGTTACAATGAATTGTCTGAGTATGTATATACATTTGCAGA--TATATATA--CATATCA-TTAATATATA----------TTTTGATAAGAGTGTCTGTGA-TGCCCTTCCTTTTTTCTTCTGTTGTTTATGT---------------AAAAA-ATGGTG----TTAT---TTGTGCTTATAA----CAATA-TACCGTTAATGTAAATAACATGT--CATTT--TG-TTCTACCTACAC---CTTCT---CAATGTTTGCTTCACT-AAACAATACAACAAACAATTTTCAAATCATCATGAGGGTATAAAAATGTGTTTTAATTTTC-T-caatatttatatgtatcaaatttgtaaaatgcactac
gi|9 : A---------A-----------A----------------AACA-----ACATT-ATTT------------------------------------------------TTGTTTCATATGTCA----TAT---GTAGACATAAT-G--CTTA----AT-------A--------T---------A--AA--AT--AAT-------TT----------AATTTGCACGGTGTAACAGAATCCT-------------A--GA-----------A--AAAAAACA-CT--TAATATCCT-GAGATTAAAACGTTTCTTATAA-CTTAAGAAATAATGTT---------------TAT--ATATACAGAATGGAGAGAGAAGA--AGATAA--CA-AA-----G-CTG----TTTA-TTTTTAA-ACTGATAAATGAAA-AGAAAAAAATGAT-T---A-AATC--TATT-ACTAT--TT-------TCA-AA-A-TACATa